Metagenome / Metatranscriptome Family F067983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	72 residues
Representative Sequence	MGAQPPGQDLKTIGQIPFDDAFPGRSVGFIHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLE
Number of Associated Samples	106
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.60 %
% of genes near scaffold ends (potentially truncated)	98.40 %
% of genes from short scaffolds (< 2000 bps)	96.80 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.09% β-sheet: 0.00% Coil/Unstructured: 84.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00535	Glycos_transf_2	11.20
PF13576	Pentapeptide_3	3.20
PF02190	LON_substr_bdg	1.60
PF01522	Polysacc_deac_1	0.80
PF14885	GHL15	0.80
PF01041	DegT_DnrJ_EryC1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.80
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.80
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.80
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.80
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
All Organisms	root	All Organisms	36.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
cellular organisms	root	All Organisms → cellular organisms	36.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.40 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2.40 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.40 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.40 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.60 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.80 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.40 %
Sphingobium chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium chlorophenolicum	1.60 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.80 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.80 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.80 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.40 %
Sphingobium chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium chlorophenolicum	1.60 %
Sphingomonas sp. SKA58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SKA58	0.80 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.80 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.80 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.00 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.40 %
Sphingobium chlorophenolicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium chlorophenolicum	1.60 %
Pseudonocardia sp. CNS-139	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	0.80 %
Sphingomonas sp. SKA58	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SKA58	0.80 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.80 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100852672	Not Available	705	Open in IMG/M
3300002914\|JGI25617J43924_10303787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SKA58	549	Open in IMG/M
3300002917\|JGI25616J43925_10372337	Not Available	527	Open in IMG/M
3300004092\|Ga0062389_101657815	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004479\|Ga0062595_100396957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300004635\|Ga0062388_101118103	Not Available	774	Open in IMG/M
3300005337\|Ga0070682_101693004	Not Available	549	Open in IMG/M
3300005355\|Ga0070671_100615211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300005435\|Ga0070714_100577638	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005468\|Ga0070707_100433921	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005471\|Ga0070698_101034449	Not Available	769	Open in IMG/M
3300005535\|Ga0070684_100932004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	814	Open in IMG/M
3300005578\|Ga0068854_101165033	Not Available	689	Open in IMG/M
3300005764\|Ga0066903_103018588	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300006028\|Ga0070717_10284454	Not Available	1467	Open in IMG/M
3300006028\|Ga0070717_10618554	Not Available	983	Open in IMG/M
3300006028\|Ga0070717_10800280	Not Available	857	Open in IMG/M
3300006028\|Ga0070717_11957953	Not Available	528	Open in IMG/M
3300006050\|Ga0075028_100767024	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006059\|Ga0075017_100899618	Not Available	687	Open in IMG/M
3300006059\|Ga0075017_101438171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium chlorophenolicum	542	Open in IMG/M
3300006175\|Ga0070712_100793748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium chlorophenolicum	812	Open in IMG/M
3300006176\|Ga0070765_101163601	Not Available	728	Open in IMG/M
3300006806\|Ga0079220_11072252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300006954\|Ga0079219_10302588	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300009551\|Ga0105238_13005803	Not Available	506	Open in IMG/M
3300009792\|Ga0126374_10988554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300009824\|Ga0116219_10747705	Not Available	534	Open in IMG/M
3300010043\|Ga0126380_11755369	Not Available	559	Open in IMG/M
3300010048\|Ga0126373_12041217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300010143\|Ga0126322_1125201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	926	Open in IMG/M
3300010358\|Ga0126370_11934752	Not Available	574	Open in IMG/M
3300010359\|Ga0126376_12569299	Not Available	557	Open in IMG/M
3300010360\|Ga0126372_10700240	Not Available	989	Open in IMG/M
3300010361\|Ga0126378_12333308	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300010361\|Ga0126378_12791538	Not Available	558	Open in IMG/M
3300010375\|Ga0105239_11781405	Not Available	713	Open in IMG/M
3300010376\|Ga0126381_100462112	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300010376\|Ga0126381_101020347	Not Available	1194	Open in IMG/M
3300010396\|Ga0134126_11093751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	889	Open in IMG/M
3300010396\|Ga0134126_11636513	Not Available	708	Open in IMG/M
3300010398\|Ga0126383_10671730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1113	Open in IMG/M
3300010937\|Ga0137776_1185104	Not Available	1005	Open in IMG/M
3300011271\|Ga0137393_10821618	Not Available	794	Open in IMG/M
3300012206\|Ga0137380_11673624	Not Available	520	Open in IMG/M
3300012971\|Ga0126369_10651028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1128	Open in IMG/M
3300013308\|Ga0157375_11549146	Not Available	783	Open in IMG/M
3300014968\|Ga0157379_11960529	Not Available	578	Open in IMG/M
3300014968\|Ga0157379_12046489	Not Available	566	Open in IMG/M
3300016341\|Ga0182035_10196142	Not Available	1593	Open in IMG/M
3300016404\|Ga0182037_11158642	Not Available	678	Open in IMG/M
3300016422\|Ga0182039_12176918	Not Available	511	Open in IMG/M
3300018033\|Ga0187867_10334034	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300021170\|Ga0210400_11007554	Not Available	677	Open in IMG/M
3300021171\|Ga0210405_11252159	Not Available	547	Open in IMG/M
3300021180\|Ga0210396_10777967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300021181\|Ga0210388_11084329	Not Available	684	Open in IMG/M
3300021181\|Ga0210388_11341648	Not Available	602	Open in IMG/M
3300021402\|Ga0210385_10484751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300021405\|Ga0210387_10529643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1048	Open in IMG/M
3300021405\|Ga0210387_11154070	Not Available	674	Open in IMG/M
3300021406\|Ga0210386_11137002	Not Available	662	Open in IMG/M
3300021433\|Ga0210391_10080766	Not Available	2568	Open in IMG/M
3300021478\|Ga0210402_10971278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300021478\|Ga0210402_11594092	Not Available	580	Open in IMG/M
3300021560\|Ga0126371_11866367	Not Available	721	Open in IMG/M
3300021560\|Ga0126371_13285349	Not Available	547	Open in IMG/M
3300025898\|Ga0207692_10744696	Not Available	638	Open in IMG/M
3300025906\|Ga0207699_11362825	Not Available	525	Open in IMG/M
3300025910\|Ga0207684_10556930	Not Available	981	Open in IMG/M
3300025915\|Ga0207693_10315760	Not Available	1223	Open in IMG/M
3300025915\|Ga0207693_11415357	Not Available	516	Open in IMG/M
3300025917\|Ga0207660_10475010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013	Open in IMG/M
3300025919\|Ga0207657_11008309	Not Available	639	Open in IMG/M
3300025928\|Ga0207700_10499044	Not Available	1077	Open in IMG/M
3300025928\|Ga0207700_10556085	Not Available	1019	Open in IMG/M
3300025929\|Ga0207664_10144411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2016	Open in IMG/M
3300025929\|Ga0207664_10374606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1263	Open in IMG/M
3300027168\|Ga0208239_1019103	Not Available	651	Open in IMG/M
3300027570\|Ga0208043_1053628	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300027725\|Ga0209178_1227858	Not Available	667	Open in IMG/M
3300029636\|Ga0222749_10212724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300030013\|Ga0302178_10487908	Not Available	538	Open in IMG/M
3300030056\|Ga0302181_10184380	Not Available	975	Open in IMG/M
3300030524\|Ga0311357_11117556	Not Available	686	Open in IMG/M
3300030743\|Ga0265461_11050209	Not Available	815	Open in IMG/M
3300031546\|Ga0318538_10727931	Not Available	538	Open in IMG/M
3300031561\|Ga0318528_10257020	Not Available	937	Open in IMG/M
3300031561\|Ga0318528_10648754	Not Available	565	Open in IMG/M
3300031564\|Ga0318573_10772586	Not Available	516	Open in IMG/M
3300031573\|Ga0310915_10645493	Not Available	749	Open in IMG/M
3300031668\|Ga0318542_10243847	Not Available	913	Open in IMG/M
3300031681\|Ga0318572_10572075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300031708\|Ga0310686_101545340	Not Available	541	Open in IMG/M
3300031708\|Ga0310686_111767082	Not Available	644	Open in IMG/M
3300031723\|Ga0318493_10489427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300031736\|Ga0318501_10244907	Not Available	947	Open in IMG/M
3300031751\|Ga0318494_10347726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300031765\|Ga0318554_10816390	Not Available	521	Open in IMG/M
3300031769\|Ga0318526_10254449	Not Available	719	Open in IMG/M
3300031770\|Ga0318521_10278457	Not Available	981	Open in IMG/M
3300031777\|Ga0318543_10071585	Not Available	1454	Open in IMG/M
3300031782\|Ga0318552_10463934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300031793\|Ga0318548_10418077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300031798\|Ga0318523_10416584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300031799\|Ga0318565_10092229	Not Available	1447	Open in IMG/M
3300031799\|Ga0318565_10592136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300031832\|Ga0318499_10125382	Not Available	999	Open in IMG/M
3300031833\|Ga0310917_10081299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300031879\|Ga0306919_10556588	Not Available	885	Open in IMG/M
3300031890\|Ga0306925_11636099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300031897\|Ga0318520_10096939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1649	Open in IMG/M
3300031910\|Ga0306923_10878003	Not Available	984	Open in IMG/M
3300031912\|Ga0306921_12197497	Not Available	582	Open in IMG/M
3300031947\|Ga0310909_10245848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300032001\|Ga0306922_12198439	Not Available	532	Open in IMG/M
3300032025\|Ga0318507_10032880	Not Available	1949	Open in IMG/M
3300032041\|Ga0318549_10022688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2395	Open in IMG/M
3300032043\|Ga0318556_10228432	Not Available	970	Open in IMG/M
3300032043\|Ga0318556_10651799	Not Available	548	Open in IMG/M
3300032055\|Ga0318575_10375726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300032089\|Ga0318525_10523829	Not Available	606	Open in IMG/M
3300032094\|Ga0318540_10104005	Not Available	1337	Open in IMG/M
3300032261\|Ga0306920_100884830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1307	Open in IMG/M
3300033289\|Ga0310914_10905521	Not Available	781	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.60%
Host-Associated	Host-Associated	6.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.20%
Aquatic	Environmental → Aquatic	6.40%
Plants	Host-Associated → Plants	6.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.60%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Sediment	Environmental → Aquatic → Sediment	2.40%
Peat	Environmental → Terrestrial → Peat	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.40%
Loam	Environmental → Terrestrial → Soil → Loam	18.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.40%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010143	Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1008526721	3300000364	Soil	MGAQPPGQAPKTIGELAFDDAFPRGSVGFSHDLHLDDRLTYASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLERPGDVIRDLH
JGI25617J43924_103037871	3300002914	Grasslands Soil	VTLPARQDHLTLGQLPLGGAFPEQSAEFVHGLHEDARLTLGAVADLADRLPRKSVICDTAAQPLLVPQGGPPRGALHQP
JGI25616J43925_103723371	3300002917	Grasslands Soil	MGAQPPEQDLKTIGQLAFDEAFPERSVEFSHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQ
Ga0062389_1016578151	3300004092	Bog Forest Soil	MDAPPGQFSKTIGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRRSV
Ga0062595_1003969572	3300004479	Soil	MGAQQSGQVPKTIGQIPFDDAFPGRAVGFVHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLAPQGGPPRGA
Ga0062388_1011181032	3300004635	Bog Forest Soil	MDAPPGQFSKTIGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLER
Ga0070682_1016930042	3300005337	Corn Rhizosphere	MGAQSPGQIPKTIGQLAYDDAFPHESVGFSHDLHLDDRLTYASVADLADRLPRRSVIADTAAQPLLVPKGGPPRGVLERPGDVIRDL
Ga0070671_1006152112	3300005355	Switchgrass Rhizosphere	MGAHPLEQVPKTIGQIPFDDAFPARSVGFVHDLYLDARLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPP
Ga0070714_1005776382	3300005435	Agricultural Soil	MGAQPAGQVPQTIGQIAFDDAFPGGSVGFVHDLSLDDRLTLPAVADLADRLPRRSVIA
Ga0070707_1004339212	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPQGHVPETIGQLAFDDTFPGRSVEFTHELYLDDRLTLASVADLADRLPRRSVIA
Ga0070698_1010344491	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPPGQTIGQIPFDDAFPGGSVGFAHDLQLDNRLTLAAVADLADRLPRRSVIADKAAQPLLAPQS
Ga0070684_1009320041	3300005535	Corn Rhizosphere	MGAHPLEQVPKTIGQIPFDDAFPARSVGFVHDLYLDARLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPR
Ga0068854_1011650333	3300005578	Corn Rhizosphere	MAAHSPEQSSMTIGQLATVDAFPRESMGFSHDLHLDDRLTYAAVADLADRLPRRSVIADTAAQPLLVPKGGPPRGVLERPGDVI
Ga0066903_1030185881	3300005764	Tropical Forest Soil	MGAQPAAQTIGRLPFDDAFPGESIGFAHELYLDDRLTLAAIADLADRLPRRSVIADTAAQ
Ga0070717_102844542	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQQHAQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASIADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERP
Ga0070717_106185542	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPQGHVPETIGQLAFDDTFPGRSVEFTHELHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVI
Ga0070717_108002802	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQQHGQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDV
Ga0070717_119579532	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MESLPDGQSLPTLGQLPGGGAFPEQPAEFAHNLHKDTRLTLQAVADLADRLPRRSVICDTSAQPLLVPQGGPPRGALDRP
Ga0075028_1007670241	3300006050	Watersheds	MRRKSQEQLPLGSGFPAQSAEFAHRLQDDPRLTLEAIADLADRLPRRSVICDTAAQPLLVPQGGPPRGALPRP
Ga0075017_1008996182	3300006059	Watersheds	MGLAFQGGGALVAEPSRQHEPTIGQIPFDGAFPEQAVEFVHDLNGDGRLTLEAIADLADRLPRRSVIYDTAAQPLLVPQ
Ga0075017_1014381711	3300006059	Watersheds	MGAPQGQVPKTIGQIAFDDAFPRRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQP
Ga0070712_1007937481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPQGHVPETIGQLAFDDTFPGRSVEFTHELHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDV
Ga0070765_1011636011	3300006176	Soil	VGAQPQEQAPKTIGQLPLDNGFPGQAAEFTHELHLDDRVTLAAVADLADRLPRRSVIAD
Ga0079220_110722521	3300006806	Agricultural Soil	MVAQAPVAELKTIGQIPFDDAFPAHSVGFRHDLHLDDRLTLASVADLADRLPRASVIADTAAQPLLVPQGGPPKGVLERPGDVI
Ga0079219_103025881	3300006954	Agricultural Soil	MGAQPPAQRIGQIPFDAAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRQSVIADSAAQPLLSPQSGPPRGALERPGDVIRDL
Ga0105238_130058031	3300009551	Corn Rhizosphere	MTIGQLAFADAFPLESVGFSHDLHLDDRLSYPSVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVL
Ga0126374_109885541	3300009792	Tropical Forest Soil	MGAQPPAQPIEQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLV
Ga0116219_107477051	3300009824	Peatlands Soil	MGAPQGQVPKTIGQIAFDDAFPRRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALE
Ga0126380_117553691	3300010043	Tropical Forest Soil	MGAHPLEQVPKTIGQIPFDDAFPARSVGFAHDLYLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVIRD
Ga0126373_120412172	3300010048	Tropical Forest Soil	MGAQPPGQGLRTIGQIAFDDAFPGRSAGFIHDLHHDERLTLASVADLADRLPRRSVIADTAAQPLLVPRGGPPRGALERPGDVI
Ga0126322_11252012	3300010143	Soil	MGGQPLGQVRRTIRQIAFDDTFPRKSVEFFHDLHLDDRLTLASVADLADRLPRRSVIA
Ga0126370_119347521	3300010358	Tropical Forest Soil	MGAQPTEQVPKTIGQIPFDDAFPGRSVGFVHELHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRGALERPGDVIR
Ga0126376_125692991	3300010359	Tropical Forest Soil	MGAQQGQVPKTIGQLALDDRFPGQSAGFTHELQLDDRLTLASVADLADRLPRRSVIADKAAQPLLVPKGGPPRG
Ga0126372_107002401	3300010360	Tropical Forest Soil	MDAQTIGQITFDDAFPGRSVGFMHDLHHDERLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGAL
Ga0126378_123333081	3300010361	Tropical Forest Soil	MGAQPPGQGVTTIGQIAFDDAFPGRSVGFIHDLHHDERLTLASVADLADRLPRRSVIADTAAQPLLVPHGG
Ga0126378_127915381	3300010361	Tropical Forest Soil	MGTQPPGPTIGQIPFDNAFPGRSVGFIHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLV
Ga0105239_117814051	3300010375	Corn Rhizosphere	MGAQPAGQVPQTIGQIAFDDAFPGRSVEFIHDLHHDNRLTLAAVADLADRLPRRSVIADTATQPLLVP
Ga0126381_1004621123	3300010376	Tropical Forest Soil	MDVQCRYPAERCVMRTQPPEPALKTIGQLPSDDAFPRQAMGFSHELHLDDRLTLASVADLADRLPRRSVIADTA
Ga0126381_1010203472	3300010376	Tropical Forest Soil	MGAQPPAQTIEQIPFDDAFPGGSVGFAHDLHLDGRLTLAAVADLADRLPRRSVIADSAAQPLLS
Ga0134126_110937511	3300010396	Terrestrial Soil	MDAQQHGQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPR
Ga0134126_116365131	3300010396	Terrestrial Soil	MTVRAAGRLPNIGQLAFDDAFPERSVGFEHDLPRDERLTLAAVADLADRLPRTSVIYDTAAQPLLVPAG
Ga0126383_106717302	3300010398	Tropical Forest Soil	MGAQPPGQGLDAIGQIAFDDGFPGRSVGFIHDLHHDGRLTLAAVADLADRLPRRSVIADTAAQP
Ga0137776_11851042	3300010937	Sediment	MGSQSPMHGLKTIGQIPFDDAFPTRSIEFSHDLPLDDRVTLPAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLE
Ga0137393_108216181	3300011271	Vadose Zone Soil	MGTQPEGQIPKTMGQIALDDAFPGQSVEFTHDLHLDDRLTLASVADLADRLPRRSVIA
Ga0137380_116736241	3300012206	Vadose Zone Soil	MGAQPQGQVRKTIGQLAFDDAFPAQSAEFIHDLHLDDRLILASVADLADRLPRRSVIADTAAQPLLVPRGGPPRGALERPGDV
Ga0126369_106510282	3300012971	Tropical Forest Soil	MGAQPSSQGVKTMGQIPSDDAFPGRSVGFSHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALER
Ga0157375_115491461	3300013308	Miscanthus Rhizosphere	MGAHPLEQVPKTIGQIPFDDAFPARSVGFVHDLYLDARLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVI
Ga0157379_119605291	3300014968	Switchgrass Rhizosphere	MGAHPLEQVPKTIGQIPFDDAFPARSVGFVHDLYLDARLTLAAVADLADRLPRRSVIADTAAQPPRSSRRSASGCPGTT
Ga0157379_120464891	3300014968	Switchgrass Rhizosphere	MGAQPAGQVPQTIGQIAFDDAFPGRSVEFIHDLHHDNRLTLAAVADLADRLPRRSVIADR
Ga0182035_101961422	3300016341	Soil	MGAQPPEQTIGRIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDV
Ga0182037_111586421	3300016404	Soil	MGAQPSGQTIGQIPFGDAFPGRSVGFTHDLHRDDRLTLPAVADLADRLPRRSVIADTATQPLLV
Ga0182039_121769181	3300016422	Soil	MGAQPTEQVPKTIGQIPFDDAFPGRSVGFVHDLHHDDRLTLAAVADLADRLPRRSVIADTATQPLL
Ga0187867_103340342	3300018033	Peatland	MVAQPVGQVPPTIGQIPFDAAFPDGPVEFAHELHLDDRLTLESIADLADRLPRHSVVCDIAGQSLLAPHGGPPRGAL
Ga0210400_110075541	3300021170	Soil	VGEQPQEQAPKTIGQLPFDNRFPGQAAEFTHELHLDDRVTLAAVADLADRLPRESVIADTAAQPLLVPQG
Ga0210405_112521591	3300021171	Soil	MGAQPPEQVPKTIGQIPFDDAFPRRSVGFIHDLPLDDRLTLASVADLADRLPRRSVIADTAAQ
Ga0210396_107779672	3300021180	Soil	MGAQPAEQVPETIRKIAFDDAFPRRSVGFIHDLRLDERLTLASVADLADRLPRRSVIADTAAQPLLVPQG
Ga0210388_110843292	3300021181	Soil	MDAQPSEQVPNTMGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPHGGPPRGALERPG
Ga0210388_113416482	3300021181	Soil	VGAQPQEQAPKTIGQLPFDNGFPGQAAEFTHELHLDDRVTLAAVADLADRLPRQSVIADTAAQPLLVPQGGPPRGALDRPGDVI
Ga0210385_104847512	3300021402	Soil	MGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPHGGPPRGALERPGDVI
Ga0210387_105296432	3300021405	Soil	MGAQPQGQVPKTMGQLAFDDAFPRHAMGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGD
Ga0210387_111540702	3300021405	Soil	MDAQQHGQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVIRD
Ga0210386_111370021	3300021406	Soil	MGTQPPEQPPEQTPKTIKQIAFDDAFPGEPVEFAHDLPHDDRLTLASVADLADRLPRRSVIADTAEQPLLVPQGGPPRGALNRPGDVI
Ga0210391_100807664	3300021433	Soil	MDAQPSEQVPNTMGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVP
Ga0210402_109712781	3300021478	Soil	MGAQPQGQVPKTIGQLAFDDAFPRHAMGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRG
Ga0210402_115940921	3300021478	Soil	MGAQPQGHVPETIGQLAFDDTFPGRSVEFTHELYLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGG
Ga0126371_118663671	3300021560	Tropical Forest Soil	MGAQPQGHVPKTIGQLAFDDAFPGQSMEFTHDLHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPHGGPP
Ga0126371_132853492	3300021560	Tropical Forest Soil	MGAQPPGQGVTTIGQIAFDDAFPGRSVGFIHDLHHDERLTLASVADLADRLPRRSVIADTAAQPLLVP
Ga0207692_107446961	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQQHGQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASVADLADRLPRRSVIADTAAQLRVKTMNTRLE
Ga0207699_113628251	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQSLGQVPKTIGEIAFDDAFPGRSVEFIHDLHHDNRLTLAAVADLADRLPRRSVIADRAAQPLLVPQGG
Ga0207684_105569301	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPPVQDLKTIGQIAFDDAFPGRSVGFIHDLHLADRLTLASVADLADRLPRRSVIADTAA
Ga0207693_103157602	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQPQGHVPETIGQLAFDDTFPGRSVEFTHELHLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVIRD
Ga0207693_114153571	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGAQSLGQVPKTIGEIAFDDAFPGRSVEFIHDLHHDNRLTLAAVADLADRLPRRSVIADRAAQPLLVPQGGPPRGALERPG
Ga0207660_104750101	3300025917	Corn Rhizosphere	MGAQSPGQVPMTIGQLAFADAFPLESVGFSHDLHLDDRLSYPSVADLADRLPRRSVIADTAAQPLLVPQ
Ga0207657_110083091	3300025919	Corn Rhizosphere	MGAQSPGQIPKTIGQLAYDDAFPHESVGFSHDLHLDDRLTYASVADLADRLPRRSVIADTAAQPLLVPEGGPPRGVLER
Ga0207700_104990441	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGAQQEQAPKTIGQLPFDNAFPGQAAEFTHELHLDDRVTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALDRPGEVIRDM
Ga0207700_105560851	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQQHGQVPKTIGQLPLDDAFPGRAAEFTHELNFDDRLTLASVADLADRLPRRSVIADT
Ga0207664_101444111	3300025929	Agricultural Soil	MAAHSPEQSSMTIGQLATVDAFPRESMGFSHDLHLDDRLTYAAVADLADRLPRRSVIADTAAQPLLVPKGGPPRGVLDRP
Ga0207664_103746061	3300025929	Agricultural Soil	MGAQPAGQVPQTIGQIAFDDAFPGGSVGFVHDLSLDDRLTLPAVADLADRLPRRSVIADTATQPLLVPQGGPPLGALERPGD
Ga0208239_10191031	3300027168	Forest Soil	MGAQPAEQVPETIRKIAFDDAFPRRSVGFIHDLHLDERLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALERPGDVI
Ga0208043_10536282	3300027570	Peatlands Soil	VSLPGPTIGQIPFEGAFPARPVEFVHDLDLDDRLTLAAVADLADRLGRRSVIYDTAAQPLLVPQGGPPRVPWPGLATSYAI
Ga0209178_12278581	3300027725	Agricultural Soil	MGAQPPEQTIGQIPFDDAFPGRSVGFTHDLHRDDRVTLAAVADLADRLPRRSVIADTAAQPLLV
Ga0222749_102127241	3300029636	Soil	MGVQPPEQVPKTIGQIPFDDAFPRRSVGFIHDLPLDDRLTLASVADLADRLPRRSVIADTAAQPLLVPQGGPPRGA
Ga0302178_104879081	3300030013	Palsa	MDTKPLGQVPITIGNIAFDDAFPARSMEFTHDLPLDNRLTLASVADLADRLPRRSVIA
Ga0302181_101843801	3300030056	Palsa	MGAQPLGQLPKTIGQIAFHDAFPKRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAERPFLVP
Ga0311357_111175561	3300030524	Palsa	PLGQLPKTIGQIAFHDAFPKRSVGFIHDLHLDDRLTLASVADLADRLPRRSVIADTAEQPLLVPKGGPPRGVL
Ga0265461_110502092	3300030743	Soil	MSAQPPGQAPKTIGQMAFDDAFPRQSMEFIHDLNLDDRLNLASVADLADRLPRRSIEKKEKT
Ga0318538_107279311	3300031546	Soil	MGAQPSGQTIGQLPFDDAFPVRSVGFTHDLHLDDRLTLPAVADLADRLPRRSVIAD
Ga0318528_102570201	3300031561	Soil	MGAQPPGQTIGQIPLDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADT
Ga0318528_106487542	3300031561	Soil	MGAQPSGQTIGQIPFDDAFPGRSVGFAHELHLDNRLTLPAVADLADRLPRRSVIADTTAQPL
Ga0318573_107725861	3300031564	Soil	MGAQAPGQTIGQIPFDDAFPRRALGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGG
Ga0310915_106454931	3300031573	Soil	MGAQPPGQTIGQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVP
Ga0318542_102438472	3300031668	Soil	MGAQPPGQTIGQIPLDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRGSG
Ga0318572_105720751	3300031681	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAKQPLLVPQGGPPRGALERPGDV
Ga0310686_1015453401	3300031708	Soil	MMGVQPSEQVPETIGQIAFDDAFPGRSVGFIHDLHLDDRLTLASVADLADRLPRQSVIADTAAQPLLVPRGGPPRGAL
Ga0310686_1117670822	3300031708	Soil	MSAQPLGQTPRTIGQMAFDDAFPSQSMEFIHDLQLDDRLTLASVADLADRLPRRSVIA
Ga0318493_104894272	3300031723	Soil	MSAQPLGQVPQTIGQIAFDDAFPGRSVGFSHDLHHDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALQR
Ga0318501_102449071	3300031736	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAKQPLLVPQGGPPRGALERPG
Ga0318494_103477262	3300031751	Soil	MGAQPPGQDLKTIGQIPFDDAFPGRSVGFIHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLE
Ga0318554_108163901	3300031765	Soil	MGAQPPGQDLKTIGQIPFDDAFPGRSVGFIHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLERPGDVIRD
Ga0318526_102544492	3300031769	Soil	MGAQPPEQVSKTIGQIPFDDAFPGRSMGFAHDLQHDGRLTLAAVADLADRLPRRSVIADTAKQPLLVPQGGPPRGALER
Ga0318521_102784572	3300031770	Soil	MGAQPPGQTIGQIPLDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRGALERPGDVIR
Ga0318543_100715851	3300031777	Soil	MGAQPPARTIGQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADSAAQPLLSPQSGPPRGALE
Ga0318552_104639341	3300031782	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTA
Ga0318548_104180771	3300031793	Soil	MGAQPPARTIGQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADSAAQPLLS
Ga0318523_104165841	3300031798	Soil	MGAQAPGQTIGQIPFDDAFPRRALGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQ
Ga0318565_100922293	3300031799	Soil	MGAQPPGQTIGRLPFDDAFPGESIGFAHELYLDDRLTLAAVADLADRLPRRSVIADTAAQSLLAPQSGPPRGALERPGDVIRDLHNAG
Ga0318565_105921362	3300031799	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVGEI
Ga0318499_101253822	3300031832	Soil	MGAQPPGQTIGQIPLDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPR
Ga0310917_100812991	3300031833	Soil	MGAQPPGQTIGQIPLDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRGALERPGD
Ga0306919_105565882	3300031879	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAEQPLLVPHGGPPRGVLERPGDV
Ga0306925_116360991	3300031890	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTAKQ
Ga0318520_100969391	3300031897	Soil	MGAQPTEQVPKTIGQIPFDDAFPGRSVGFVHDLHHDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRGVLERP
Ga0306923_108780031	3300031910	Soil	MGAQAPGQTIGQIPFDDAFPRRALGFTHDLHLDDRLTLAAVADLADRLPRRSVIADTA
Ga0306921_121974972	3300031912	Soil	MGAQPPEQVSKTIGQIPFDDAFPGRSMGFAHDLQHDGRLTLAAVADLADRLPRRSVIADT
Ga0310909_102458482	3300031947	Soil	MSAQPLGQVPQTIGQIAFDDAFPGRSVGFSHDLNHDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGALP
Ga0306922_121984392	3300032001	Soil	MGAQPSGQTIGQIPFDDAFPGRSLGFTHDLHRDDRLTLPAVADLADRLPRRSVIADT
Ga0318507_100328804	3300032025	Soil	MGAQPPGQTIGRLPFDDAFPGESIGFAHELYLDDRLTLAAVADLADRLPRRSVIADTAAQSLLAPQSGPPRGALERPGDVI
Ga0318549_100226881	3300032041	Soil	MGAQPPARTIGQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADSAAQPLLSPQSGPPRGALERPG
Ga0318556_102284322	3300032043	Soil	MGAQAPGQTIGQIPFDDAFPGRSLGFTHDLHLDDRLTLAAVADLADRLPRRSVIAD
Ga0318556_106517991	3300032043	Soil	MGAQPPGQTIGRLPFDDAFPGESIGFAHELYLDDRLTLAAVADLADRLPRRSVIADTAAQSLLAPQSGPPRGALERPGDVIRDLH
Ga0318575_103757261	3300032055	Soil	MGAQAPGQTIGQIPFDDAFPGRSVGFIHDLHLDDRLTLAAVADLADRLPRRSVIADTAAQPLLVPQG
Ga0318525_105238292	3300032089	Soil	MGAQPPARTIGQIPFDDAFPGGSVGFAHDLHLDDRLTLAAVADLADRLPRRSVIADSAAQPLLSPQSGPPRGALERPGDVI
Ga0318540_101040051	3300032094	Soil	MGAQPPGQTIGRLPFDDAFPGESIGFAHELYLDDRLTLAAVADLADRLPRRSVIADTATQPLLVPQGGPPRG
Ga0306920_1008848302	3300032261	Soil	MGAQPSGQTIGQIPFDDAFPGRSVGFAHELHLDNRLTLPAVADLADRLPRRSVIADTAAQPLL
Ga0310914_109055213	3300033289	Soil	MGAQPSGQTIGQLPFDDAFPVRSVGFTHDLHLDDRLTLPAVADLADRLPRRSVIADTAAQPLLVPQGGPPRGVLERPGDVIRDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences