Metagenome / Metatranscriptome Family F068008

Basic Information
Family ID	F068008
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	40 residues
Representative Sequence	MSEKPSTTLPATVEKIIKPLSPRDPEKAQIAVEGADHLY
Number of Associated Samples	113
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	6.40 %
% of genes from short scaffolds (< 2000 bps)	3.20 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (96.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.200 % of family members)
Environment Ontology (ENVO)	Unclassified (28.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.200 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.40% Coil/Unstructured: 80.60%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF12732	YtxH	4.80
PF13502	AsmA_2	3.20
PF00072	Response_reg	2.40
PF04675	DNA_ligase_A_N	2.40
PF13545	HTH_Crp_2	2.40
PF01554	MatE	2.40
PF02881	SRP54_N	2.40
PF01594	AI-2E_transport	1.60
PF02562	PhoH	0.80
PF04851	ResIII	0.80
PF00534	Glycos_transf_1	0.80
PF04075	F420H2_quin_red	0.80
PF01042	Ribonuc_L-PSP	0.80
PF02348	CTP_transf_3	0.80
PF04542	Sigma70_r2	0.80
PF13620	CarboxypepD_reg	0.80
PF09844	DUF2071	0.80
PF11154	DUF2934	0.80
PF01740	STAS	0.80
PF12706	Lactamase_B_2	0.80
PF00248	Aldo_ket_red	0.80
PF07136	DUF1385	0.80
PF07043	DUF1328	0.80
PF01695	IstB_IS21	0.80
PF01261	AP_endonuc_2	0.80
PF07676	PD40	0.80
PF13424	TPR_12	0.80
PF04679	DNA_ligase_A_C	0.80
PF16694	Cytochrome_P460	0.80
PF13442	Cytochrome_CBB3	0.80
PF12867	DinB_2	0.80
PF07366	SnoaL	0.80
PF01464	SLT	0.80
PF00300	His_Phos_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.20
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.60
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.80
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.80
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.80
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.80
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.80
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.80
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.80
COG3872	Uncharacterized conserved protein YqhQ, DUF1385 family	Function unknown [S]	0.80
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.80
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.80

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
All Organisms	root	All Organisms	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
cellular organisms	root	All Organisms → cellular organisms	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005602\|Ga0070762_10005076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6364	Open in IMG/M
3300018086\|Ga0187769_10281881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300020199\|Ga0179592_10309111	Not Available	701	Open in IMG/M
3300021307\|Ga0179585_1180239	Not Available	518	Open in IMG/M
3300021401\|Ga0210393_10116978	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300021406\|Ga0210386_10051524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3271	Open in IMG/M
3300027117\|Ga0209732_1001573	All Organisms → cellular organisms → Bacteria → Acidobacteria	3558	Open in IMG/M
3300027376\|Ga0209004_1033654	Not Available	844	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.60%
Host-Associated	Host-Associated	6.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.00%
Aquatic	Environmental → Aquatic	9.60%
Plants	Host-Associated → Plants	6.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.60%
Peat	Environmental → Terrestrial → Peat	10.40%
Freshwater	Environmental → Aquatic → Freshwater	6.40%
Roots	Host-Associated → Plants → Roots	2.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Sediment	Environmental → Aquatic → Sediment	1.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.80%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.20%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.40%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.60%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024123	Spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028772	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01187300	2199352024	Soil	MSDVEKLSTTLPGMVEKIIKPAYSGQTEKAQISVEGADHLYR
JGI1027J11758_125355021	3300000789	Soil	MAEKPSVNLKGTVEKIIKPVVPTQPEKAQIAVDGA
JGIcombinedJ26739_1017565711	3300002245	Forest Soil	VSETNESEKPKVTLPGTVEKIIPANSIAPEKAQIAVEGA
Ga0062387_1017568681	3300004091	Bog Forest Soil	MSEKPSTTLPATVEKIIKPIAPGEPEKAQISIEGADHLYKEIR
Ga0062386_1002551102	3300004152	Bog Forest Soil	VPDEEHKASTTLPGKVERVIKPHPQSGEPEKAQIAVEGADHLYREI
Ga0070707_1011640021	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTENSSSSLRGTVEKIITSRVSTEPEKAQISIEGADHLYKELRI
Ga0070697_1013991792	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPEKANVTLPGTVEKIINPPDPSEPEKAQINIQQGADPLYK
Ga0070762_100050767	3300005602	Soil	MSEKASATLPAIVEKIIKPAYPSEPEKAQIAVEGADHLYRE
Ga0070762_100254913	3300005602	Soil	MSEKASRTLPATVEKIIKPPVPDGTEKAQISVEGADHLYR
Ga0070762_107803383	3300005602	Soil	MTDKPSVTLPGTVEKVIHSADPRIPEKAQIAVQGADDL
Ga0070717_100123333	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTEKPSVTLPKTVEKIIKPSEPSEPEKAQIAIEGADDLYRELRCA*
Ga0070717_108496091	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKQNSIVPDEKPSTTLPGIVEKVIKPRDPRDPEKAQIVVEGADHLY
Ga0070717_117760941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDEKPSTTLPGTVEKIIKPWVSGEPEKAQISVEGADHLY
Ga0075029_1010592301	3300006052	Watersheds	MPEKPNIKLPATVEKIIKSPDPRMPEKAQISIERGADPLY
Ga0070712_10000176311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKPSTILPGTVEKIIKPPLPRMPEKAQITVEGGDHL*
Ga0070765_1011579231	3300006176	Soil	MSEISSDQNEKPSTTLAGTVEKIIKPAHPSLPEKAQIAVEGGEDLYR
Ga0097621_1020094952	3300006237	Miscanthus Rhizosphere	MDEKPSTILPGTVEKIIKPPLPRMPEKAQITVEGG
Ga0075436_1005705981	3300006914	Populus Rhizosphere	MTGNPRTTLAGKVEKIIESRAPTEPEKAQIVIEGADQL
Ga0066710_1014669031	3300009012	Grasslands Soil	MSENPSATLPGTVEKIIKSPHPGVPEKAQISVEAAD
Ga0099829_106654792	3300009038	Vadose Zone Soil	MSEKTSTTLPGTVEKIIKPLSPDDTEKAQIAVEGA
Ga0099830_113261181	3300009088	Vadose Zone Soil	MMEKPSVTLPGTVEKIIKPVHPSEPEKAQIAVEGA
Ga0099792_105191941	3300009143	Vadose Zone Soil	MADRPSVTLPGTVEKVIESPHRGAPEKAEIAVEGADDLY
Ga0116138_11718622	3300009552	Peatland	MTENPSVRLPGTVEKIIKPSGPSEAEKAQIAIEGADELY
Ga0116105_10070971	3300009624	Peatland	MSANANTTLPATVEKIIKSPHPAIPEKAQIAIEGADH
Ga0126384_110262231	3300010046	Tropical Forest Soil	MDEKASVVLPGTVEKIIKPVHPKEPERAEISIEGADHLYKEIRIE
Ga0126373_125544581	3300010048	Tropical Forest Soil	MAEKPSTTRPGIVEKIIRPIVPDEPEKAQIAVEGADHLYR
Ga0099796_102852803	3300010159	Vadose Zone Soil	MTEKIAEKPSVTLSGTVEKIIEPVHPSMPEKAQIAVEGADDLYQ
Ga0126370_120750562	3300010358	Tropical Forest Soil	MPEKTENPSVTLPGKVEKIIKPLDRTDTEKAQINIEEGADPLYKEIRIENML
Ga0126372_129309502	3300010360	Tropical Forest Soil	MPEKPSVTLPGTVDKIIHPPDPREPEKAQINIEDGADPLYKE
Ga0134125_102354734	3300010371	Terrestrial Soil	MNEKPSAILPGTVEKIIKSPIPNESEKAQIAVEGADHLY
Ga0126351_12707881	3300010860	Boreal Forest Soil	MSENPSTTLPGTVERIIKPLSADEPEKAQIAIEGADHLYREI
Ga0150983_160198731	3300011120	Forest Soil	MPDEQNSDKPSTTLPGIVEKVIKSPDPTEPEKAQIAVERADPL
Ga0137393_101775411	3300011271	Vadose Zone Soil	MKENSIVPDEKPSTTLPGIVEKVIKPRDPRDPEKAQIAVEGADHL
Ga0137393_104831671	3300011271	Vadose Zone Soil	MSEKPSTTLPGTVEKIIKPLSPDDTEKAQIAVEGADHL
Ga0137389_118462912	3300012096	Vadose Zone Soil	MTEKPSVTLPGTVEKIIKPIHPSEREKAQISVDGADE
Ga0150985_1199612053	3300012212	Avena Fatua Rhizosphere	MSTPVATVTLPGVVENIIKSPHPSLPDKAQITVEGADELY
Ga0137360_107161452	3300012361	Vadose Zone Soil	MADKTSVTLPGTVEKVIESPHRGMPEKAEIAVEGADDL
Ga0150984_1170822862	3300012469	Avena Fatua Rhizosphere	MTEKPSTARPGIVERIIKSPDPREPEKAQISIEGAD
Ga0137358_107008462	3300012582	Vadose Zone Soil	MSEKPSVTLPGTVEKIIPSPDPREPEKAHINIEEGATPLYKEIRIENTLTNEDG
Ga0137358_108749141	3300012582	Vadose Zone Soil	MADKPSVTLPGTVEKVIESPHRGMPEKAEIAVEGADDLYREI
Ga0137397_108463861	3300012685	Vadose Zone Soil	MTEKIVEKPSVTLPGTVEKIIEPIHPSMTEKAQIAVEGADDLYQE
Ga0137419_116958081	3300012925	Vadose Zone Soil	MADKPSVTLPGTVEKVIESPHRGMPEKAEIAVEGADDLY
Ga0137416_109886011	3300012927	Vadose Zone Soil	MTEKPSVSLPGTVDKIITPPDPRDPEKAQINIEEGADPLYKE
Ga0181535_102699402	3300014199	Bog	MNPKPSATLPGTVEKIIKPPHPSEPEKAQIAVEGA
Ga0167658_10372683	3300015195	Glacier Forefield Soil	MEESMPEKPSISLPGTVDKIIRPPDPREPEKAQINIEEGADPLYKEIR
Ga0137409_111849423	3300015245	Vadose Zone Soil	MPEKPSVTLPATVEKIITTPDPIEPEKAQISLEDGDP
Ga0187821_105031051	3300017936	Freshwater Sediment	MTENSSTSLCGTVEKIITSRVSTEPEKAQISIEGAD
Ga0187882_12346322	3300018021	Peatland	MSEKPSTTLPATVEKIIKPLSPRDPEKAQIAVEGADHLY
Ga0187769_102818811	3300018086	Tropical Peatland	MTEKPSVTLPGTVEKIIESPHPGEPEKAQISIEGADDLY
Ga0066662_109738071	3300018468	Grasslands Soil	MPDTENPSTILPGTVEKIIKPWFPGDTEKAQISIQGADHMYREIRI
Ga0066669_121424791	3300018482	Grasslands Soil	MSAKPSVTMPGTVEKIIPSHDPKEPDKAHISIEKGAIPLY
Ga0193721_11382742	3300020018	Soil	MTEGSSDQSEKPSATLSGTVEKIIKSPDPNVPEKAQITVEGA
Ga0179592_103091113	3300020199	Vadose Zone Soil	MAEKPSVTLPGTVEKIIKPSQPGQPEKAQIEIEGADDM
Ga0179592_104005871	3300020199	Vadose Zone Soil	MFSRRGTLMTEKPSVTLPGTVEKIIKPIHPSEPEKAQISVEGADELY
Ga0210401_101230661	3300020583	Soil	MSEKPSTTLPGTVEKIIKPLSPDDTEKAQIAVEGADH
Ga0210400_104067242	3300021170	Soil	MTLRPSATLPGTVEKIIKPSDPSEPEKAQIAEDGADHL
Ga0210405_110782892	3300021171	Soil	MSENSIVPDEKPGTTLSGIVEKVIKPRGPRDPEKAQIVAQGADHLYGEIRI
Ga0210388_100911591	3300021181	Soil	MSEKASATLPAIVEKIIKPAYPSEPEKAQITVEGADHLYREI
Ga0210388_101439344	3300021181	Soil	MTENPSVTLPGTVEKIIKPSAPSDAEKAQIAIEGADELYR
Ga0179585_11802391	3300021307	Vadose Zone Soil	MTAKPSVTLPGTVEKIIQPSEPNQAEKAQIAIEGADDLYR
Ga0210393_101169781	3300021401	Soil	MPEKPATVTLPGKVEAIIESFHPSEPEKAQIAVEGGDELY
Ga0210389_106733803	3300021404	Soil	MTDKPRTADRPNVTLPGRVEKVIESPLPSEPEKAQISVEGA
Ga0210389_108049732	3300021404	Soil	MTEKPSATLSGTVEMTIESIIPSEPEKAQITFGGADHPHKIRIENK
Ga0210387_116119141	3300021405	Soil	MSEKPSTILPATVENIIKPLFPSEPEKAQITIEGADHLYRELR
Ga0210386_100515248	3300021406	Soil	MTEKPSVTLPGTVEKIIKPAQPDQPEKAQIAIEGADDLY
Ga0210384_109654372	3300021432	Soil	MSSEKAKDTMSSDEKPAITLPGTVEKIVPPVYPEPEKVQIHVEGADHLYK
Ga0210391_101146351	3300021433	Soil	MASEQTHDKPAATLPGVVEKVIKPPSPAEPEKAQITVEGADH
Ga0210398_109510872	3300021477	Soil	MSEKASATLPAIVEKIIKPAYPSEPEKAQIAVEGAD
Ga0212123_103877712	3300022557	Iron-Sulfur Acid Spring	VTETNESEKPKVTLPGTVEKIIPANSIAPEKAQIAVEGADHLY
Ga0224562_10242941	3300022733	Soil	MPEATESKKPAVTLPGTVEKIIPANTIAPERAQIAVEGADHL
Ga0224561_10181312	3300023030	Soil	MSEKPSTTLPATVEKIIESPHPSVPEKVQLSVEGA
Ga0228600_10180681	3300024123	Roots	VTEKHTVTLPATVEKIIKPSDPREPEKAQISIAGADDLYREIRI
Ga0228598_10073262	3300024227	Rhizosphere	MSEKSSTTLPATVEKIIKSPHPSVPEKVQIAVEGADHLF
Ga0137417_149446812	3300024330	Vadose Zone Soil	MLPGTVQKIIKPIDPHAPDTAEIAIEGAEDLYREIRVENT
Ga0209171_104861271	3300025320	Iron-Sulfur Acid Spring	MSEKPSTTLPAVVEKIIKPIYPSEPEKAQIAVEGADHL
Ga0208935_10062722	3300025414	Peatland	MSANANTTLPATVEKIIKSPHPAIPEKAQIAIEGADHL
Ga0207652_113827422	3300025921	Corn Rhizosphere	VTLPGTVEKIIPSPHPSEPEKAQIGIDGADDLYREL
Ga0207664_100839011	3300025929	Agricultural Soil	MTEKIDSKPSVTLPGTVEKIIKPLHPSMPEKAEIAVEGADELYQ
Ga0207664_115587921	3300025929	Agricultural Soil	MPENPSTSIPAVVEKIIKVPGAPEKAQLIVEAGDDLYR
Ga0207702_100658891	3300026078	Corn Rhizosphere	VSRTKKATVTLPGTVEKIIPPPSRFSDEPEKAEIAVE
Ga0209240_10445481	3300026304	Grasslands Soil	MPEKPSVTLPGVVEQIIESPHPDMPEKAQIAVEGA
Ga0209471_12367971	3300026318	Soil	MAEKPSVTLPGTVEKIIKPSEPGQLEKAQIEVEGADDMYREL
Ga0257163_10382001	3300026359	Soil	MPEKTAEKPSVTLPGTIEKIIEPIHPSMPQKAEIAVHGA
Ga0209732_10015736	3300027117	Forest Soil	MTEKPSVTLPGTVEKIIKPADPRDPEKAQINVHGAEPLYQEIRID
Ga0209004_10336541	3300027376	Forest Soil	MTENASTTLVGTVEKIIKPRFPSEPERAQIVVEGADHLYK
Ga0209525_11114191	3300027575	Forest Soil	MSEKASATLPAIVEKIIKPAYPSEPEKAQIAVEGADHLYR
Ga0209625_10425631	3300027635	Forest Soil	MIEKSSTVLPGTVEKIIKSPYSAEPEKAQISVEGA
Ga0209118_11181481	3300027674	Forest Soil	MTEKSSAILPGTVEKIISSLVPTQPEKAQIRVEVAD
Ga0209580_100274071	3300027842	Surface Soil	MDEKTSTILPGTVEKIIKPPFPSMPEKAQITVEGGDH
Ga0209579_106950102	3300027869	Surface Soil	MTEKPSVTLPGTVERVIRPIDPNQPDKAQITVQGAD
Ga0209275_102226991	3300027884	Soil	MSEKASRTLPATVEKIIKPPVPDGTEKAQISVEGADHLYRELR
Ga0209275_108283871	3300027884	Soil	MTDKPSVTLPGTVEKVIHSADPRIPEKSQIAVQGADDL
Ga0209006_104001912	3300027908	Forest Soil	MSEKPNVTLPATVEKIIKSPDPRMPEKAQINIERGAEPLYQEIRI
Ga0209069_106953741	3300027915	Watersheds	MTEKPSATLPGTVEKTIKSPFPSEPEKAQIAVEGAYHLY
Ga0137415_110284383	3300028536	Vadose Zone Soil	MTEKPSVSLPGTVDKIITPPDPRDPEKAQINIEEGADPLYKEIRI
Ga0302209_101570991	3300028772	Fen	MSEKPNATLPGTVEKIIKSPDPEVPDKAQITVECAD
Ga0302225_101983282	3300028780	Palsa	MSEKPSTTLPGTVEKIIKPISPDEPEKAQIAIHGADDLYREI
Ga0308309_103057761	3300028906	Soil	MTEKPSVTLPGTVEKIIKPTQPDQPEKAQIAVEGADDLYR
Ga0308309_103489512	3300028906	Soil	MSEKPSTTLPATVEKIIKPVFPSEPERAQIAIHGA
Ga0311339_100269758	3300029999	Palsa	MGDKPSTTLPATVEKIIKSPFPSTPEKAQLAVEGAD
Ga0302274_102582411	3300030041	Bog	MSEKASATLPATVEKIIKSPAPSIPEKAQIAVEGADHL
Ga0302306_103426841	3300030043	Palsa	MSEKPSTTLPATVDKIIRPPSPRDPEKAQITVEGADHLY
Ga0302282_11195482	3300030045	Fen	MTEKPSATLPATVEKIIKPIAPGEPEKAQISIEGADYLYQEI
Ga0311360_100929971	3300030339	Bog	MPENPSVTLPAVVDKIIEPSNPSEPEKAQINIQEGAEPLYQEIRIENNLTDENGQ
Ga0311353_113064372	3300030399	Palsa	MTEGPSATLPGTVEKIVKSPVPSEPDIAQIAVEGA
Ga0311345_103696403	3300030688	Bog	MTEKPSVTLPGVVEEVIPPAHPSQPEKAQIAVANADD
Ga0310039_102891311	3300030706	Peatlands Soil	MTEKPSATLPGTVEKIIKSPHPSEPEKVQIAVEGADELYK
Ga0265750_10247102	3300030813	Soil	MSEKPSTTLPAIVEKVIKSPHPNEPEKAQITVEGAD
Ga0308152_1093431	3300030831	Soil	MNEKPSAILPGTVEKIIKSPIPNEPEKAQIAVEGADH
Ga0073994_123999791	3300030991	Soil	MFNGKVQRKGSPMTEKPSVTLPGTVEKIIKPIHPSEPEKAQISVDGAD
Ga0170834_1056352361	3300031057	Forest Soil	MTEKPSVTLPGVVQKIIKPFDPKAPDRAQIAVEGADELYRE
Ga0302324_1017131811	3300031236	Palsa	MSREPEKESSEKPAITLLGTVEKIIPAIQPVEPEKAQISLEGADHLYREI
Ga0170820_160732392	3300031446	Forest Soil	VTEKPSATMPGAVEKIIKSPWGETEKAQIAIETADHLYRESGLK
Ga0302326_127111872	3300031525	Palsa	MSEKASATLPATVEKIIKSPAPSIPEKAQIAVEGADH
Ga0310686_1016467512	3300031708	Soil	MTIMSEKPSTTLAATVEKVIKPVSPGEPEKAQIAVEGADHLYREL
Ga0307474_105600521	3300031718	Hardwood Forest Soil	MSEKPNITLPATVEKIIKSPDPKMPEKAQINIERGAEPLYQ
Ga0307469_122358041	3300031720	Hardwood Forest Soil	MPENEKPSTTLPGTVEKIIKPLIPGEPEKAQISVEGADHL
Ga0307477_102316632	3300031753	Hardwood Forest Soil	TISENSIVPDEKPSTTLPGIVEKLIKPRHPRDPEKAQIVVQEQTT
Ga0307475_103101273	3300031754	Hardwood Forest Soil	MSEKPSVTLPGTVEKIIESPHRDVPEKAEIAVHGADD
Ga0302315_102819913	3300031837	Palsa	VSDKPAVTLPGTVEKIIPPVAGEPEKAQIAVDGADDLYRE
Ga0316049_1133272	3300031866	Soil	VTEKHTVTLPATVEKIIKPSDPREPEKAQISIAGAD
Ga0307479_121154781	3300031962	Hardwood Forest Soil	MAENPSATLPAIVEKIIKFPGAPEKAQVAVEGADHLYREI
Ga0307471_1036527142	3300032180	Hardwood Forest Soil	MSEKPSTTLPGTVERIIKPLSADDPEKAQIAIEGADDLY
Ga0316212_10493232	3300033547	Roots	MAEKPSTTLPATVEKIIKSRSPNEPEKAQIAVEGADPLYRE
Ga0334804_026801_1_108	3300033818	Soil	MSEKSSTTLSATVEKVIKPLSPREPEKAQIAVEGAD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068008

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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