Metagenome / Metatranscriptome Family F068046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068046
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	97 residues
Representative Sequence	VTSLQFLWVVAIAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRL
Number of Associated Samples	105
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.57 %
% of genes near scaffold ends (potentially truncated)	95.20 %
% of genes from short scaffolds (< 2000 bps)	85.60 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.200 % of family members)
Environment Ontology (ENVO)	Unclassified (52.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.40% β-sheet: 0.00% Coil/Unstructured: 33.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00072	Response_reg	74.40
PF01627	Hpt	17.60
PF01966	HD	3.20
PF08545	ACP_syn_III	1.60
PF05193	Peptidase_M16_C	0.80
PF03795	YCII	0.80
PF13646	HEAT_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	82.40 %
Unclassified	root	N/A	2.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	82.40 %
Unclassified	root	N/A	2.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	62.40 %
Unclassified	root	N/A	2.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	62.40 %
Unclassified	root	N/A	2.40 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10129320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300002561\|JGI25384J37096_10085463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1132	Open in IMG/M
3300002561\|JGI25384J37096_10172327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	660	Open in IMG/M
3300002562\|JGI25382J37095_10197698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300002908\|JGI25382J43887_10240229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	840	Open in IMG/M
3300002914\|JGI25617J43924_10205428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	655	Open in IMG/M
3300005167\|Ga0066672_10567382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300005174\|Ga0066680_10113520	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300005174\|Ga0066680_10921804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300005176\|Ga0066679_10028939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3031	Open in IMG/M
3300005177\|Ga0066690_10166066	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300005179\|Ga0066684_10436699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	880	Open in IMG/M
3300005186\|Ga0066676_10286990	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005186\|Ga0066676_10390038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	937	Open in IMG/M
3300005444\|Ga0070694_100040388	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300005446\|Ga0066686_10616258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	738	Open in IMG/M
3300005471\|Ga0070698_102028890	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005518\|Ga0070699_101620021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M
3300005526\|Ga0073909_10642852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300005536\|Ga0070697_100685522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	903	Open in IMG/M
3300005552\|Ga0066701_10465548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300005555\|Ga0066692_10921973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300005568\|Ga0066703_10726079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300005569\|Ga0066705_10453749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300005569\|Ga0066705_10570990	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300005586\|Ga0066691_10025014	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300006173\|Ga0070716_100843668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300006791\|Ga0066653_10486700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300006794\|Ga0066658_10203364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1048	Open in IMG/M
3300006796\|Ga0066665_10286725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1318	Open in IMG/M
3300006797\|Ga0066659_10632237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	871	Open in IMG/M
3300006797\|Ga0066659_11533173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300006797\|Ga0066659_11572548	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300006800\|Ga0066660_10398921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1135	Open in IMG/M
3300006800\|Ga0066660_11202353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300006854\|Ga0075425_100491306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1413	Open in IMG/M
3300007258\|Ga0099793_10228361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	896	Open in IMG/M
3300009012\|Ga0066710_101314971	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1121	Open in IMG/M
3300009012\|Ga0066710_102458549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	754	Open in IMG/M
3300009088\|Ga0099830_10784714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	786	Open in IMG/M
3300009089\|Ga0099828_10391047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1254	Open in IMG/M
3300009090\|Ga0099827_11537245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300009836\|Ga0105068_1101220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300010301\|Ga0134070_10010636	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300010304\|Ga0134088_10318185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300010322\|Ga0134084_10056845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300010322\|Ga0134084_10147598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	788	Open in IMG/M
3300010325\|Ga0134064_10200559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300010335\|Ga0134063_10236083	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	867	Open in IMG/M
3300010336\|Ga0134071_10127868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1225	Open in IMG/M
3300010337\|Ga0134062_10392317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300010373\|Ga0134128_10597875	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300011270\|Ga0137391_10036794	All Organisms → cellular organisms → Bacteria	4136	Open in IMG/M
3300011270\|Ga0137391_10404330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1166	Open in IMG/M
3300012096\|Ga0137389_10694061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	875	Open in IMG/M
3300012096\|Ga0137389_11006096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300012206\|Ga0137380_10764216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300012208\|Ga0137376_11798436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300012209\|Ga0137379_10320646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1460	Open in IMG/M
3300012210\|Ga0137378_11375274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	620	Open in IMG/M
3300012349\|Ga0137387_10073096	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300012349\|Ga0137387_10812930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300012356\|Ga0137371_11376402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300012360\|Ga0137375_10842358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	733	Open in IMG/M
3300012361\|Ga0137360_10455872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1084	Open in IMG/M
3300012917\|Ga0137395_10211759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1352	Open in IMG/M
3300012922\|Ga0137394_11591236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300012927\|Ga0137416_11125263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300012929\|Ga0137404_10006815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7763	Open in IMG/M
3300012930\|Ga0137407_10104013	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300012944\|Ga0137410_10333006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1209	Open in IMG/M
3300015052\|Ga0137411_1221200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	644	Open in IMG/M
3300015053\|Ga0137405_1280705	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300015245\|Ga0137409_10084459	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300015264\|Ga0137403_10034105	All Organisms → cellular organisms → Bacteria	5360	Open in IMG/M
3300015264\|Ga0137403_10125407	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300015357\|Ga0134072_10246686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300015358\|Ga0134089_10471073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	546	Open in IMG/M
3300017656\|Ga0134112_10107723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1051	Open in IMG/M
3300017657\|Ga0134074_1220053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300018059\|Ga0184615_10364493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300018482\|Ga0066669_10590770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300019255\|Ga0184643_1125676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300021046\|Ga0215015_10571730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300021086\|Ga0179596_10216579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	936	Open in IMG/M
3300021178\|Ga0210408_11280657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	557	Open in IMG/M
3300024330\|Ga0137417_1118319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300024330\|Ga0137417_1227632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	790	Open in IMG/M
3300024330\|Ga0137417_1236908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	639	Open in IMG/M
3300024330\|Ga0137417_1287720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300025922\|Ga0207646_10985552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300026296\|Ga0209235_1043163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2228	Open in IMG/M
3300026297\|Ga0209237_1205810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300026301\|Ga0209238_1282134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300026306\|Ga0209468_1152586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300026310\|Ga0209239_1363966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300026313\|Ga0209761_1246966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300026317\|Ga0209154_1177050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300026318\|Ga0209471_1022537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3158	Open in IMG/M
3300026326\|Ga0209801_1001564	All Organisms → cellular organisms → Bacteria	14083	Open in IMG/M
3300026326\|Ga0209801_1053659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1826	Open in IMG/M
3300026328\|Ga0209802_1153718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	966	Open in IMG/M
3300026328\|Ga0209802_1305607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300026329\|Ga0209375_1139422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1040	Open in IMG/M
3300026333\|Ga0209158_1197966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300026334\|Ga0209377_1158860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300026342\|Ga0209057_1144018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	802	Open in IMG/M
3300026524\|Ga0209690_1003874	All Organisms → cellular organisms → Bacteria	8505	Open in IMG/M
3300026528\|Ga0209378_1168040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	826	Open in IMG/M
3300026540\|Ga0209376_1132758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1218	Open in IMG/M
3300026551\|Ga0209648_10600855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300027643\|Ga0209076_1123420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	731	Open in IMG/M
3300027643\|Ga0209076_1189227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300027669\|Ga0208981_1048491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1083	Open in IMG/M
3300027875\|Ga0209283_10879699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	544	Open in IMG/M
3300028536\|Ga0137415_11448820	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300028819\|Ga0307296_10344782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300028878\|Ga0307278_10279247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300031720\|Ga0307469_11841038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300031720\|Ga0307469_12386476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	516	Open in IMG/M
3300033407\|Ga0214472_10375003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1340	Open in IMG/M
3300033417\|Ga0214471_11013404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.20%
Host-Associated	Host-Associated	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.60%
Aquatic	Environmental → Aquatic	1.60%
Plants	Host-Associated → Plants	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Sediment	Environmental → Aquatic → Sediment	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.20%
Loam	Environmental → Terrestrial → Soil → Loam	5.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	43.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101293201	3300002558	Grasslands Soil	VTSRQFLVIFAIAQGVLLLALITLILLNRWIRLRRSAKVDPRRIELDAVMQRWVLGEAPAGAVADALGELPMPFIIDALVTWSARVPGERW
JGI25384J37096_100854632	3300002561	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVGALARLPVSMAVDALVTWSARVPGERWQDLSRLLANQWWARVLRT
JGI25384J37096_101723271	3300002561	Grasslands Soil	VTSLQVLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRQDLDAVMQRWAMGQASAAEVERALARLPVPLAVDALVTWSA
JGI25382J37095_101976982	3300002562	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQAL
JGI25382J43887_102402291	3300002908	Grasslands Soil	VTSLQVLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRHDLDAVMQRWAMGQASAAEVERALARLPVPLAVDGLVTWSARVPGERWQDL
JGI25617J43924_102054282	3300002914	Grasslands Soil	VTSRQFLLVVALAQGVLLVALIILIILNRWFRLRRSVKLRPRRVELDDVMRRWALGQATAVEVSHALARLPVPLAIEGLVTWSARVAGERWQELARTLEHQWWA
Ga0066672_105673822	3300005167	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSR
Ga0066680_101135203	3300005174	Soil	VTILQFLWVVAVAQGVLLVALVILIILNRWFRLRRSARLQPRRHELDAAMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDL
Ga0066680_109218042	3300005174	Soil	VTSHRFLLIVAVAQGVLLVALVILIILNRWIRLRRRAKLDPRRLELEEVMHRWALGKATQDEVLRLLARLPASIAIDALVTWSARVASERWQELSRGLESQWW
Ga0066679_100289395	3300005176	Soil	VTSRQFLLIVAIAQGALLVALVVLIILNRWVRVRRRAQVHPRRIELDGLMQRWSLGQAPSGEVLRALARLPVPVAIDALVTWSARIGGERWQELSRGLE
Ga0066690_101660661	3300005177	Soil	VTSRQFLIVVAAVQGVLLIALIILIILNRWVRLRRGAKLHPRRVALDAVMQRWTLGQAGAADVLRGLAQLPVPLAIDALVTWSARVAGERWQE
Ga0066684_104366992	3300005179	Soil	VTSRQFLIVVAAVQGVLLIALIILIILNRWVRLRRRAKVHPRRVALNAVMQRWTLGQAGAVDVLRALAHLPVPLAIDALVTWSARVAGERWQELSQALEHQWW
Ga0066676_102869901	3300005186	Soil	VTSLQFLWVVAVAQGVLLVSLVILIILNRWFRLRRSARLQPRRHELDAAMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRVLASQWWARVVRINNRSAR
Ga0066676_103900382	3300005186	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARV
Ga0070694_1000403881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRQALDAVMQRWTMGQAPAAEVGEALARLPVSLAVDALVTWSARVPGERWQDLSRLLATEWWARVVRTNNRS
Ga0066686_106162582	3300005446	Soil	LGGPVTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVGALARLPVSLAVDALVTWSA
Ga0070698_1020288901	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQALDAVMQQWTIGQAPAGEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVLRTNNRSA
Ga0070699_1016200212	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTSRQFLLIVAIAQGVLLVALVILIMLNRWVRVRRSAGIHPRRIELDGVMQRWSLGKASPDEVLRALAGLPVPIAIDALVTWSARIAGERWQELS
Ga0073909_106428521	3300005526	Surface Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRKALDAVMQRWTMGQAPAAEVGQALARLPVSLAVDALVTWSARVPGERWQD
Ga0070697_1006855221	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRRELDAAMQSWALGQAPAASVERALARLPVSLAVDALV
Ga0066701_104655482	3300005552	Soil	VTSRQFLLIVAIAQGMLFVALVILIILNRWIRLRRRAKVNPRQIELDAVMQRWALGQASQDEVLRALARLPVPIAIDALVTWSAR
Ga0066695_100563571	3300005553	Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALV
Ga0066692_109219731	3300005555	Soil	VTSHKVLVIVAVAQGVLLFALVVLIILNRWVRLRRSAKVDPRQVELDAVMHRWALGQASQDDVLQGLARLPVPIAIEAIVTWSARVASERWQELSRGLESQWWAR
Ga0066703_107260791	3300005568	Soil	VTSRQFLIVVAAVQGVLLIALIILIILNRWVRLRRRAKVHPRRVALDAVMQRWTLNQAGAADVLRGLARLPVPLAIDA
Ga0066705_104537492	3300005569	Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSR
Ga0066705_105709902	3300005569	Soil	VTSRQFLLIVAIAQGVLLVGLVILIVLNRWVRVRRSARIHPLRIELDTLMQRWSLGQASPDEVLRAMARLPVPIAIDALVTWSARIGGDRWQELSRGLESQWWARAVR
Ga0066691_100250145	3300005586	Soil	VTNRQFLLIVAAAQGVLLVALIVLIILNRWIRLRRSAKLHPRRLELDAVMRRWTLSQAGADDVLRGLSRLPVSLAIDALVNWSARV
Ga0070716_1008436682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRRELDAAMQSWALGQAPAANVERALARLPVSLAVDALVTWSARVPGERWQDL
Ga0066653_104867002	3300006791	Soil	VTTLQFLWVVAVAQGVLLVALIILIILNRWFDLRRSARLQPRRRELDAVMQRWTIGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLASQWYSLPESVLSVLAAEFRPPIR*
Ga0066658_102033642	3300006794	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRLLATQWWARVVR
Ga0066665_102867251	3300006796	Soil	VTSRQFLLIVAIAQGMLFVALVILIILNRWIRLRRRAKVNPRQIELDAVMQRWALGQASQDEVLRALARLPVPIAIDALVTWYARDASERWQELSRGLESQW
Ga0066659_106322372	3300006797	Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQELNAVMQRWAMGQASAAEVERALARLPVPLAIDALVTSSARVPGERWQDLSRVLANQWWT
Ga0066659_115331732	3300006797	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWA
Ga0066659_115725481	3300006797	Soil	VTSLQFLWVVAVAQGVLLVSLVILIILNRWFRLRRSARLQPRRHELDAAMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGE
Ga0066660_103989211	3300006800	Soil	VTSRHFLVIVAVAQGVLLLALITLIILNRWVRLRRSAKVDPRRIELDAVMQRWVLGQADAGAVADALGLLPMTFIIDALVTWSARVPGERWREL
Ga0066660_112023531	3300006800	Soil	VTSRQFLIVVAAVQGVLLIALIILIILNRWVRLRRRAKVHPRRVALDAVMQRWTLNQAGAADVLRGLARLPVPLAIDALVTWSARVAGERWQE
Ga0075425_1004913061	3300006854	Populus Rhizosphere	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQALDAVMQQWTMGQAPAGEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVLR
Ga0099793_102283612	3300007258	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVT
Ga0066710_1013149711	3300009012	Grasslands Soil	MTSRQFLIVVAAVQGVLLVALVVLIILNRWVRARRRARLDPHRVELDAVMQRWALGQATSEDVLGSLARLPAPLAIDALVTWSARVVSERWQEPARA
Ga0066710_1024585491	3300009012	Grasslands Soil	VTSRQFLIAVAAVQGALLIALIILITLNRWIRLRRRARVHPRRLAVDGVMQRWMLGQAGAPDVLRALAHLPVPLAIDALVTWSARVPGERWQV
Ga0099829_105014612	3300009038	Vadose Zone Soil	MTSHQFLVIVAVAQGLLLVALVVLIILNRWVRLHRSAKVDPRQVELDAIMHRWALGQASQDDVLRALARLPVPIAIEAIVTWS
Ga0099830_107847142	3300009088	Vadose Zone Soil	VTSHRFLLIVAVAQGVLLVALVILIILNRWIRLRRRAQLDPRRLELEEVMHRWALGQATQDEVLRLLARLPASVAIDALVTWSARVASERWQELSRGLENQWWAKAV
Ga0099828_103910471	3300009089	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRQALDAVMQRWTMGQAPAAEVAQALARLPVSLVVDALVTWSARVPGERWQ
Ga0099827_115372452	3300009090	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQALDAVMQQWTMGQAPAAEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVL
Ga0105068_11012201	3300009836	Groundwater Sand	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLASQWWARVLRTNNRSA
Ga0134070_100106364	3300010301	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQALSQALEHQWWTRVV
Ga0134088_103181852	3300010304	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQALSQALEHQWWT
Ga0134084_100568451	3300010322	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGER
Ga0134084_101475982	3300010322	Grasslands Soil	VTTLQFLWVVAVAQGVLLVALIILIVLNRWFRLRRSARLQPRRRELDAVMQRWTMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLASQWWTR
Ga0134064_102005592	3300010325	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQELSQ
Ga0134063_102360832	3300010335	Grasslands Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQDLDAVMQRWAMGRASAAEVEGALARLPVPLAVDALVTWSARVPG
Ga0134071_101278682	3300010336	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQTLDAVMQQWTMGQAPAGEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWA
Ga0134062_103923171	3300010337	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQELSQALEHQW
Ga0134128_105978751	3300010373	Terrestrial Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLANQWWARVLRTNYRSARWG*
Ga0137391_100367946	3300011270	Vadose Zone Soil	VTSLQFLWAVAVAQGILLLALIILIILNRWFRVRRSARLQPHRRELEAVMHRWTMGQAPAAEVVGALARLPVSLAVDALVTWS
Ga0137391_104043302	3300011270	Vadose Zone Soil	VTSRQFLVIVAIAQGGLLLALITLIILNRWVRLRRSAKVDPRRIELDAVMQRWVLGEGHAGAVADALGELPMPFIIDALVTWSARVPGERWRELS
Ga0137389_106940611	3300012096	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVTWS
Ga0137389_110060962	3300012096	Vadose Zone Soil	VRSREFLLIVAIVQGGLLVALVILIILNRWIRLRRRARLDPRRLELEEVMHRWTLGQATQDEVLRLLARLPASIAIDALITWSAR
Ga0137380_107642162	3300012206	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAIDALVTWAARVPGERWQDLSRVLANQWWTRVVRTN
Ga0137376_117984361	3300012208	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAIDGLVTWS
Ga0137379_103206463	3300012209	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQALDAVMQQWTMGQAPAAEVAQALVRLPVSLAVDALVTWSARVPGERWQDLSRVL
Ga0137378_113752742	3300012210	Vadose Zone Soil	VTSRQFLLIVAVAQGVLLVALVILIILNRWVRVRRGARLNPRRIELDGVMQRWSLGQAPSDEVLRALARLPVPVAIDGLVTWSARIGGERWQELSRA
Ga0137387_100730963	3300012349	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQELDAVMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSA
Ga0137387_108129302	3300012349	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWS
Ga0137371_113764022	3300012356	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRQALDAVMQRWTMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDRSRVLAS
Ga0137375_108423581	3300012360	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRHELDAVMQRWAMGQALATEVEQALARLPVSLAVDALVTWSARVP
Ga0137360_104558721	3300012361	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVGALARLPVSLAVDALVTWSARVPGERWQD
Ga0137395_102117592	3300012917	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVAQALARLPVSLAVDALVTWSARVPGERW
Ga0137394_115912362	3300012922	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELEAVMQRWAMGQAPAADVAHALARLPVSLAVDALVTWSARIPGERWQDLSRLLANQWWARVLRTNNRSARWWK
Ga0137416_111252631	3300012927	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRRELEAVMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGARWQDLSRLLAHQWWARVLRTNYRS
Ga0137404_1000681510	3300012929	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAADVVGALARLPVSLAVDALVTWSARVPGERWQDLS
Ga0137407_101040131	3300012930	Vadose Zone Soil	VTSLQFLWVVAIAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWAMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRL
Ga0137410_103330061	3300012944	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLAHQWWARVLRTNYRSARWWKR
Ga0137411_12212002	3300015052	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDAL
Ga0137405_12807051	3300015053	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAADVVGALARLPVSLAVDALVTWSARVPGERWQDLSRLLAPTSGGRACCAPTAGRRA
Ga0137409_100844591	3300015245	Vadose Zone Soil	VTSRQFLVIVAIAQGVLLLALITLILLNRWIRLRRSAKVDPRRIELDAVMQRWVLGEADAGALAHALGSLPIPFIIDALVTWSARVPGERWRELSSQL
Ga0137403_100341051	3300015264	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLAHQWWARVLRTNY
Ga0137403_101254073	3300015264	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVGQALARLPVSLAVDALVTWSARVPGERWQDLSRLLAHQWWARVLRTNY
Ga0134072_102466862	3300015357	Grasslands Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQELNAVMQRWAMGQASAAEVERALARLPVPLAIDALVTSSARVPGERWQDLS
Ga0134089_104710732	3300015358	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQTLDAVMQQWTMGQAPAGEVAQALARLPVSLAVDALVTWSARVP
Ga0134112_101077232	3300017656	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLRPRRQTLDAVMQQWTMGQAPAGEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWW
Ga0134074_12200532	3300017657	Grasslands Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGE
Ga0184615_103644931	3300018059	Groundwater Sediment	VTSRQFLLIVALAQGALFVALVTLIILNRWVRVRRSAKVDPRRIELDALMQRWALGQGSADEVLRGLAGLPVPVAIDALVTWSARVPGERW
Ga0066669_105907701	3300018482	Grasslands Soil	VTTLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWTMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRL
Ga0184643_11256762	3300019255	Groundwater Sediment	VTSRQFLLIVAIAQGVLLVALITLIVLNRWVRLRRSAAVNPRRIELDALMQRWALGQSGPDDVMQGLARLPVPLAIEALVTWSARVPGERWQELARGLENRWWARAVRA
Ga0215015_105717302	3300021046	Soil	VTSRQFLLVVAMAQGVLLVALIILIILNRWFRLRRSAKLQPRRVELDEVMRRWALGQVTAVEVSHALARLPVPPSLWREKGIV
Ga0179596_102165792	3300021086	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVGALARLPVSLAVDALVTWSARVPGERWQDLSRLLAN
Ga0210408_112806572	3300021178	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVAALARLPVSLAVDALVTWSA
Ga0137417_11183192	3300024330	Vadose Zone Soil	VTSRHILVIVAIAQGVLLLALITLIALNRWVRLRRSAKVDPRRIELDTVMQRWVLGEADAGAVAHALGWLPIPFLI
Ga0137417_12276322	3300024330	Vadose Zone Soil	VTSRQFLVIVAIAQGVLLLALITLILLNRWIRLRRSAKVDPRRIELDAVMQRWVLGEADAGALAHALGSLPIPFIIDALVTWSARVPGERWRELSSQLEHRWWARVLRG
Ga0137417_12369081	3300024330	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWAMGQAPALEVERALARLPVSLAVDDALVTWSARVPGERWQDLSRLLANQ
Ga0137417_12877202	3300024330	Vadose Zone Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWAMGQAPALEVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLANQW
Ga0207646_109855522	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTSLQFLWVVAVAQGVLLIALIILIILNRWFRLRRSARLLPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAVDGLVTWSARVPGERW
Ga0209235_10431631	3300026296	Grasslands Soil	VTSRQFLVIFAIAQGVLLLALITLILLNRWIRLRRSAKVDPRRIELDAVMQRWVLGEAPAGAVADALGELPMPFIIDALVTWSARVPGERWRE
Ga0209237_12058101	3300026297	Grasslands Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRRELEAVMHRWTMGQAPAAEVVGALARLPVSLAVDALVTWSARVPGER
Ga0209238_12821342	3300026301	Grasslands Soil	VTSRQFLLIVAIAQGALLVALVVLIILNRWVRVRRRAQIHPRRIELDGLMQRWSLGQAPSDEVLRALARLPVPVAIDALVTWSARIGGERWQELSRGLESQGWARAV
Ga0209468_11525862	3300026306	Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVVRTNNRSARWWK
Ga0209239_13639661	3300026310	Grasslands Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRLRRSARLQPRRRELDAVMQRWTMGQAPAAEVERALARLPVSLAVDALVTWSARVPGERWQDLSRLLASQWWTRVL
Ga0209761_12469661	3300026313	Grasslands Soil	VTSRQFLLIVAIAQGVLLVGLVILIVLNRWVRVRRSARIHPLRIELDTLMQRWSLGQASPDEVLRAMARLPVPIAIDALVTWSARIGGDRWQELSRGLESQWWARAV
Ga0209154_11770502	3300026317	Soil	VTSLQFLWVVAIAQGVLLLALIILIILNRWFRLRRSARLQPRRHELDAVMQRWAMGQAPAADVERALARLPVSLAVDALVTWSARVPGER
Ga0209471_10225376	3300026318	Soil	VTSRQFLLIVAIAQGALLVALVVLIILNRWVRVRRRAQVHPRRIELDGLMQRWSLGQAPSGEVLRALARLPVPVAIDALVTWSARIGGERWQELSRGLESQWWARAVRA
Ga0209801_100156415	3300026326	Soil	VTSRQFLVIVAAVQGVLLIALVILIILNRWIRLRRGAKLHPRRVALDGVMQRWTLGQAGAADVLRALAQLPVPLAIDALVTWSARVAGERWQALSQALEHQWW
Ga0209801_10536593	3300026326	Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLA
Ga0209802_11537181	3300026328	Soil	VTSRQFLVIVAAVQGVLLVALVVLIILNRWVRARRRAQLDPHRVELDAVMQRWVLGQAQSDDVLRALARLPAALAIDALVTWSARIVSERWQELAR
Ga0209802_13056071	3300026328	Soil	VTSRQFLLIVAVAQGVLLVALVILIILNRWVRVRRSARLNPQRIELDRVMQRWSLGQAPSDEVLRALARLPVPVAIDGLVTWSARIGGE
Ga0209375_11394222	3300026329	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQTPAAEVVQALARLPVSLAVDALVTWSARVPGERW
Ga0209473_11839682	3300026330	Soil	VTSRQFLIVVAAVQGVLLIALIILIILNRWVRLRRRAKVHPRRVALNAVMQRWTLGQAGAVDVLRALAHLPVPLAI
Ga0209158_11979661	3300026333	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVVRTNN
Ga0209377_11588601	3300026334	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDL
Ga0209057_11440181	3300026342	Soil	VTSRQFLLIVAITQGALLVALVILIMLNRWVRVRRRAQINPRRIELDGLMQRWSLGQAPSGEVLRALARLPVPVAIDALVTWSARIGGERWQELS
Ga0209690_100387410	3300026524	Soil	VTSRQFLLIVAVAQGVLLVALVILIILNRWVRVRRSARLNPQRIELDGVMQRWSLGQAPSDEVLRAMARLPVPVAIDGLVTWSARIGGERWQELARALESQWWARA
Ga0209378_11680402	3300026528	Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRRELDAVMQRWAMGQAPAADVERALARLPVSLAIDALVTWSARVPGERWQDLSRVL
Ga0209376_11327582	3300026540	Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPG
Ga0209648_106008551	3300026551	Grasslands Soil	VTSLQFLWVVAVAQGVLLVALIILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVAQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVLR
Ga0209076_11234201	3300027643	Vadose Zone Soil	VTSRQFLVIVAIAQGVLLLALITLILLNRWIRLRRSAKVDPRRIELDAVMQRWVLGEAAAGAVADALGELPMPFIIDALVTW
Ga0209076_11892272	3300027643	Vadose Zone Soil	VTNRQFLLIVAAAQGVLLVALIVLIILNRWIRLRRSAKLHPRRLELDAVMRRWTLSQAGADDVLRGLSRLPVSLAIDALVNWSARVAGERWQELSH
Ga0208981_10484911	3300027669	Forest Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRKSARLQPRRRELDAVMQSWALGQAPATSVERALARLPVSLAVDALVTWSARVPGERWQDLSRVLANQWWTRVLRTNNRS
Ga0209283_108796992	3300027875	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRQALDAVMQRWTMGQAPAAEVAQALARLPVSLAVDALVTWS
Ga0137415_114488202	3300028536	Vadose Zone Soil	VTSLQFLWVVAVAQGILLVALVILIILNRWFRVRRSARLQPRRQALDAVMQRWTMGQAPAAEVVQALARLPVSLAVDALVTWSARVPGERWQDLSRVLATQWWARVVRTNNRSARW
Ga0307296_103447822	3300028819	Soil	VTSLQFLLIVALAQGVLLVALIILIILNRWFRVRRSAKLHPRRVELDAVMQGWALGRARADEVLRALGRLPVSLAVDALVTWSARVPGERWQELSRVLEHQWWTRV
Ga0307278_102792472	3300028878	Soil	VTSLQFLLIVALAQGVLLVALIILIILNRWFRVRRSTKLHPRRVELDAVMQGWALGRARADEVLRALGRLPVSLAVDALVTWSARVPGERWPELSRVLEHP
Ga0307469_118410382	3300031720	Hardwood Forest Soil	VTSRQFLLIVAIAQGVLLVALVVLIMLNRWVRVRRSARIHPRRIELDGVMQRWSLGKARPDEVLRALAGLPVPIAIDALVTWSARIAGERWQELSRG
Ga0307469_123864761	3300031720	Hardwood Forest Soil	VTSLQFLWVVAVAQGILLVALIILIILNRWFRLRRSARLQPRRQALDAVMQRWTMGQAPAAEVGQALARLPVSLAVDALVTWSARVPGERWQDLSRLLATEWWARVVRTNNRSAR
Ga0214472_103750031	3300033407	Soil	VTSRQFLLIVAGAQGALLIALVTLIILNRWIRLRRSAKVDPRRIELDAVMLRWALGQADAEEVQRGLARLPVPVAIDALVTWSARVPGERWQELSRGLETRWWARVVRADARS
Ga0214471_110134041	3300033417	Soil	VTSRQFLLIVAGAQGALLIALVTLIILNRWIRLRRSAKVDPRRIELDAVMLRWALGQADAEEVQRGLARLPVSVAIDALVTWSARVPGERWQELSRGLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences