Metagenome / Metatranscriptome Family F068089

Basic Information
Family ID	F068089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	44 residues
Representative Sequence	MSQTVVERTAEHIAESAHQASRATSAIADAIEDGVGVVRRAAK
Number of Associated Samples	112
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	32.00 %
% of genes from short scaffolds (< 2000 bps)	32.80 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Unclassified (69.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.200 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.600 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.52% β-sheet: 0.00% Coil/Unstructured: 46.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF05532	CsbD	36.00
PF00072	Response_reg	4.80
PF13545	HTH_Crp_2	4.00
PF00691	OmpA	4.00
PF04972	BON	2.40
PF14361	RsbRD_N	1.60
PF12779	WXXGXW	1.60
PF04041	Glyco_hydro_130	0.80
PF16499	Melibiase_2	0.80
PF06210	DUF1003	0.80
PF00561	Abhydrolase_1	0.80
PF11752	DUF3309	0.80
PF00107	ADH_zinc_N	0.80
PF02470	MlaD	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	36.00
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.80
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
All Organisms	root	All Organisms	30.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
cellular organisms	root	All Organisms → cellular organisms	28.80 %
Viruses	superkingdom	All Organisms → Viruses	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.20 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.60 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100884281	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300004091\|Ga0062387_101213205	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300004102\|Ga0058888_1382033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	710	Open in IMG/M
3300004474\|Ga0068968_1340953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	598	Open in IMG/M
3300004476\|Ga0068966_1355435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	679	Open in IMG/M
3300005541\|Ga0070733_10183342	All Organisms → cellular organisms → Bacteria → Acidobacteria	1366	Open in IMG/M
3300005891\|Ga0075283_1061832	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005952\|Ga0080026_10246343	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005995\|Ga0066790_10157428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	972	Open in IMG/M
3300006052\|Ga0075029_100191745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1272	Open in IMG/M
3300009645\|Ga0116106_1036641	All Organisms → Viruses → Predicted Viral	1669	Open in IMG/M
3300009645\|Ga0116106_1173453	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300011081\|Ga0138575_1042502	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300014498\|Ga0182019_10309317	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300014657\|Ga0181522_10342282	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300017925\|Ga0187856_1178258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	783	Open in IMG/M
3300017940\|Ga0187853_10075401	All Organisms → cellular organisms → Bacteria → Acidobacteria	1688	Open in IMG/M
3300017948\|Ga0187847_10198354	All Organisms → Viruses → Predicted Viral	1094	Open in IMG/M
3300018006\|Ga0187804_10565535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	515	Open in IMG/M
3300018016\|Ga0187880_1453552	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018024\|Ga0187881_10353451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	605	Open in IMG/M
3300018038\|Ga0187855_10245071	Not Available	1052	Open in IMG/M
3300018040\|Ga0187862_10326548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	961	Open in IMG/M
3300018043\|Ga0187887_10340993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	884	Open in IMG/M
3300018046\|Ga0187851_10096233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1846	Open in IMG/M
3300020579\|Ga0210407_10729779	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300021432\|Ga0210384_10290561	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300021559\|Ga0210409_10723325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	867	Open in IMG/M
3300023255\|Ga0224547_1033504	Not Available	662	Open in IMG/M
3300027812\|Ga0209656_10311715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	725	Open in IMG/M
3300027867\|Ga0209167_10590626	Not Available	608	Open in IMG/M
3300028873\|Ga0302197_10528868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	512	Open in IMG/M
3300029889\|Ga0246001_1084600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	582	Open in IMG/M
3300030580\|Ga0311355_10276635	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300030617\|Ga0311356_10792390	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300030618\|Ga0311354_10818059	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300030659\|Ga0316363_10174613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	908	Open in IMG/M
3300031247\|Ga0265340_10279170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	742	Open in IMG/M
3300031718\|Ga0307474_10558159	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300033405\|Ga0326727_10622614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	890	Open in IMG/M
3300033983\|Ga0371488_0165004	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.80%
Host-Associated	Host-Associated	7.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.20%
Aquatic	Environmental → Aquatic	37.60%
Plants	Host-Associated → Plants	7.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.20%
Freshwater	Environmental → Aquatic → Freshwater	31.20%
Peat	Environmental → Terrestrial → Peat	16.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.40%
Sediment	Environmental → Aquatic → Sediment	4.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.00%
Loam	Environmental → Terrestrial → Soil → Loam	11.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.20%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.20%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.40%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.60%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.60%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.80%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.80%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005891	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011071	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029981	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_2	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_10000243813	3300002245	Forest Soil	MTQTVLERTADHITESAHQASRASSAVADAIADGAGAVRRA
JGIcombinedJ26739_1006601142	3300002245	Forest Soil	MTQTVLXRTADHITESAHQASRASSAVADAIADGAGAVRRA
JGIcombinedJ26739_1008842813	3300002245	Forest Soil	MSPTVLEKTAEQIAQSAHQASRATRAVGDAIDDGVG
Ga0062387_1012132051	3300004091	Bog Forest Soil	VSQTVVERTAEQIGKSARQASRARSAIADAIEDGVRVVRHATKQGGDAA
Ga0058888_13820332	3300004102	Forest Soil	MSESAVGRTSEFIAESATQPSRATGAIAEAIQDGIGVVRRAAQQGGDAAENFD*
Ga0062386_1012684421	3300004152	Bog Forest Soil	MSQTVVERTAEQIGKSARQASRATGAIADAIEDGVGVVRRAAKQGGD
Ga0068968_13409533	3300004474	Peatlands Soil	MSQTVVERTAEHIAESAHQASRATSAIADAIEDGVGVVRRAAKQGGDTAEEF
Ga0068966_13554353	3300004476	Peatlands Soil	MSQTVVERTAEQIGKSARQASRATSAIADAIEDGVGVVRRAAKQGGDTAEEF
Ga0062595_1000345064	3300004479	Soil	MSQTVAERAAGHIEESARQASRATSAVAEAIGDGVKVVRRAAKQ
Ga0058899_101617481	3300004631	Forest Soil	MSQTVTERAAQQITESAHQASRVTHAVADAIDDGVRTARRAAKQGG
Ga0058899_102014752	3300004631	Forest Soil	MAQTILERTADHITESAHQASRASSAVADAIHDGVGVARSAAKQSG
Ga0070733_101833423	3300005541	Surface Soil	MSQTVLERTAEHIAESAHQASRATSAVADAIEDGAGVVRRAARQSG
Ga0070664_1007681301	3300005564	Corn Rhizosphere	MTQTVLERTAESVQQASHATRAVANAVIEDGVGVVRRAAKQGGDAAEE
Ga0070763_109989943	3300005610	Soil	MSQTVVERTAEQIGKSIDQASRATSAIADAIEDGVGVARRAAKQG
Ga0075283_10618323	3300005891	Rice Paddy Soil	MSKTVAERTAEQISESIHQASRATSAVADAIEDGVGVVRRAAKKSGDVAEE
Ga0075274_10526891	3300005901	Rice Paddy Soil	MAKTVAERTAEQISESIHQASRATSAVADAIEDGVGVVRRAAKKSGD
Ga0070766_107201702	3300005921	Soil	MSQTVAETTAEYVGESVRQASRATGAIADAVEDALGVVRRAAK
Ga0080026_102463432	3300005952	Permafrost Soil	MSQSVLDRTAEQVTESARRASRATNAVADAIEDGVGVARHAARQGGDAAEQ
Ga0066790_101574283	3300005995	Soil	MSQSVLERTAEHVTDSARQASRASRAVADAIEEGVEVARRAAREGGDAAEGFLNDTA
Ga0075029_1001917452	3300006052	Watersheds	MSQTVVERTAEHIADSAHQAARATSAIADAIGNGVGVARRAAKQGGD
Ga0075029_1008635991	3300006052	Watersheds	MSQTVAERAAGHIAESAHQASRATSAVAEAIEDGLGVVR
Ga0075015_1002239231	3300006102	Watersheds	MSQTVVERTAEHIAESARQASRATRAAADAVIEDGVGVVRRAAKQ
Ga0075030_1013469591	3300006162	Watersheds	MSPTVLDRATERIAESARQASRATSAVADAIIEDGVGVVKR
Ga0075018_102525592	3300006172	Watersheds	MSQTILERTAEHISDSAHQASRATRAAADAIDEGVGAVRRAA
Ga0070712_1000614143	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSQTVLDRTAERVAESARQASRATSGVADAIIEDGVGVVRRAAK
Ga0116128_11604352	3300009518	Peatland	MSQTVVARTAEHIGESARRASRATGAIADAIEDGVGVVRRAAK
Ga0116114_10752732	3300009630	Peatland	MAQSVLDRTAEHIAESAHQASRATSAVADAIEDGVGVVRRA
Ga0116117_10552773	3300009635	Peatland	MFMSQTVLEKTAEHIAESAHKASRATSAVADAIEDGVGAVRRAAK
Ga0116106_10366411	3300009645	Peatland	MSQFVAERTADHIGESARRASCATSAIADAIEDGMGVVRRAAKQGGDA
Ga0116106_11734531	3300009645	Peatland	MSQTVVERTADHIGESARRASCATSAIADAIEDGMGVVRRAAKQGGDA
Ga0116106_12092843	3300009645	Peatland	MSKTVVERTAEHIAESAHQASRATSAVADAIQDGVGVVRRGA
Ga0116132_12671791	3300009646	Peatland	MPQSGLERSAERIAESAHQASRATSAVADAIEDGVGVVRRAAKQG
Ga0116223_103937791	3300009839	Peatlands Soil	MQEETMSQTVVERTAEHIGDSARRASRATSAIADAIEDGVGVV
Ga0136449_1024512192	3300010379	Peatlands Soil	MSQTVMERTAEQVTDSAHQASRATNAVADAIGNGVGAVRRAAK
Ga0138595_11473403	3300011071	Peatlands Soil	MSQTVVERTAEQIGKSARQASRATSAIADAIEDGVGVVRR
Ga0138575_10425021	3300011081	Peatlands Soil	MSQTVVERTAEHIAESAHQASRATSAIADAIADGIGVVRRAAKQGSDAAEDL
Ga0150983_129878683	3300011120	Forest Soil	MSHTVLERTAEHVTETAHQASRASNAVSNAIEDGVRVV
Ga0164305_109234001	3300012989	Soil	MSQTVLDRATERIAESARQASRATSGVADAIIEDGV
Ga0181532_106331872	3300014164	Bog	MSQTVVERTVEHIGESARRASTATSAVADAIEDGVGAVR
Ga0181526_102263142	3300014200	Bog	MPQTVVERTAEHIAESAQRASRAASAIADAVEDGLGVVRLAAK
Ga0163163_104501813	3300014325	Switchgrass Rhizosphere	MSQTVAERAAGHIEESARQASRATSAVAEAIGDGVKVVRRAAKQGG
Ga0182019_103093173	3300014498	Fen	MSQTVAEKAADHIAESAEQASRATCAVADAIGNGLGAVRRAAK
Ga0181522_103422823	3300014657	Bog	MSQTVAERTAEYIADSANQASRATTAVADAIEDGVGVARRAAKHGGDAAEE
Ga0181511_10767091	3300016702	Peatland	VSQTVVERTAEQIGKSARQASRATSAIADAIEDGVG
Ga0181511_14111041	3300016702	Peatland	MGRKNAQEETMSQTVVERTADHIAESAHQASRATSAIADAIED
Ga0181515_14137813	3300016730	Peatland	MSQTVVERTAEHIGESARRASRATSAIADAIEDGVGVVRRA
Ga0187818_103269413	3300017823	Freshwater Sediment	MSQTVLKRTAEHIAESAHQASRATSAVAAAIEDGVGVVRRAA
Ga0187856_11782581	3300017925	Peatland	MPQSVLERSAERIAESAHQASRATSAVADAIEDGVGVVRRAAKEGGD
Ga0187854_101778022	3300017938	Peatland	MPQSVLERSAERIAESAHQASRATSAVADAIEDGVGVV
Ga0187853_100754011	3300017940	Peatland	MSQFVAERTADHIGESARRASCATSAIADAIEDGMGVVRRAAKQGGDAAEEI
Ga0187847_101983544	3300017948	Peatland	MSQTVVERTAEHIAESAHQASRASSAIADAFEDGVGVMRSAAKQSGDAVEEIL
Ga0187817_105204952	3300017955	Freshwater Sediment	MSQTVAERAADHIAESAHQASRATSAVAEAIEDGVGVVRRAAK
Ga0187804_105655351	3300018006	Freshwater Sediment	MSQTVMERTAEHIGESARQASRATSAIADAIDDGVG
Ga0187810_103172831	3300018012	Freshwater Sediment	MSQTVMERTAEHIGESARQASRATSAIADAIDDGVGAVRRAAKQGG
Ga0187880_14535523	3300018016	Peatland	MSQTVVERAADHIGESARRASCATSAIADAIEDGLGVVRRAAKQGGDAAE
Ga0187881_103534513	3300018024	Peatland	MSQFVAERTADHIGESARRASCATSAIADAIEDGMGVVRRAAKQGGDAA
Ga0187875_101877221	3300018035	Peatland	MSQTVMERTADNIAESAHQASRATGAIADAIEDGVGVVRHAAKQ
Ga0187883_104136651	3300018037	Peatland	MSQTVVERTAEQIAETAQQASRATCAIADAIEDGVGV
Ga0187855_102450713	3300018038	Peatland	MSQTVVERTADNIAESAHQASRATCAIAEAVEGGVGAVRHAAKQSCD
Ga0187862_103265481	3300018040	Peatland	MSQTVVERAADHIAESADQATRATCAVADAIGNIVRAVRRNARQGGDA
Ga0187871_102109151	3300018042	Peatland	VSQTVAERTAEHITESARQASRATSAIADAIEDGVEAVTRTAKRS
Ga0187887_102982972	3300018043	Peatland	MPQSVMERAGDHIAESVRKASRTTSAVADAIEDGVGAAKRVAK
Ga0187887_103409932	3300018043	Peatland	MSQTVVERTADNIAESAHQASRATCAIADAVEDGVNAVRHAAKQSCDAGEELL
Ga0187851_100962331	3300018046	Peatland	MSQTVVERAADHIAESADQATRATCAVADAIGNSVRAVRRTARQGGD
Ga0187851_105023381	3300018046	Peatland	MSQSVLERTAEHIAESAHQASRATSAVADAIKDGVGVARRAAKQS
Ga0187852_14108211	3300019082	Peatland	MPQSVLERSAERIAESAHQASRATSAVADAIEDGVGVVRRAAKQ
Ga0210407_107297792	3300020579	Soil	MSQIVVERTAEQIGKSARQASRASSAIADAIEDGVGVVRRAAKRGGDLDAS
Ga0210396_112406362	3300021180	Soil	MSQTLVEKADEHIAESAHQTSRATSAVADAIEDGLGVVRR
Ga0210388_103010492	3300021181	Soil	MAQTISERTADHITESAHQASRASSAVADAIHDGVGVARSAAKQSGD
Ga0210393_115606131	3300021401	Soil	MAQTILERTADHITESAHQASRASSAVADAIHDGVGVARSAAKQSGDAVEEF
Ga0210384_102905611	3300021432	Soil	MSQTIAERTAEHIAESAHQASRATSAVAEAIEDGVGVVRRAAKRGGD
Ga0210391_101711931	3300021433	Soil	MTQTVLERTADHITESAHQASRASSAVADAIADGAG
Ga0210410_102068031	3300021479	Soil	MSQTVLDRTTERIAESARQASRATSALADAIIEDGVG
Ga0210409_107233251	3300021559	Soil	MSQTVIEQTAGHIAASARQASRATTAVADAIEDGVGVMRRAAKQGG
Ga0212123_102662423	3300022557	Iron-Sulfur Acid Spring	MAQTVLERTADHITESAHQASRASSAVADAIHDGVGVARRAAKQS
Ga0212123_108531152	3300022557	Iron-Sulfur Acid Spring	VSQPVLDKTAERIAQSARQASRATSAVADAIIENGVGVVR
Ga0224547_10335042	3300023255	Soil	MSQTLVERTAEHIADSAHQASRATSAIAEAIEGGVGVMRRAAKHGGDAAEEF
Ga0208692_10205711	3300025472	Peatland	MSQTVVERTAEHIAESAHQASRATSAIADAIEDGVGVVRRAAK
Ga0208937_10198671	3300025506	Peatland	MSQTVVERTADNIAESAHQASRATCAIADAVEVGVGAVRHAAK
Ga0207664_101975801	3300025929	Agricultural Soil	MPQTVLERTGEHIAESARKASRVTSVVADAIEDGVG
Ga0207706_115258581	3300025933	Corn Rhizosphere	MTQTVLERTAESVQQASHATRAVANAVIEDGVGVVRRAAQ
Ga0207678_117768541	3300026067	Corn Rhizosphere	MSQTVAERAAGHIEESARQASRATSAVAEAIGDGVKVARRAA
Ga0209648_106765132	3300026551	Grasslands Soil	MSQSVLERTADQVTESAHHASRATRAVADAIDEGVGVARRAVKQGGDAA
Ga0209420_11143711	3300027648	Forest Soil	MSQTVVERTAESIGKSARQASRATSAVADAIEDGVEVVK
Ga0209656_103117153	3300027812	Bog Forest Soil	MSQSVLERTAEQVADSARQASRASSAVADAIEDGVGVVRRAAK
Ga0209039_104217581	3300027825	Bog Forest Soil	MSQNVVERTADQITESAHQASRASKAIADAIQDGVGVARRAAKHGG
Ga0209517_102374461	3300027854	Peatlands Soil	MSQTVVERTAEHIAASAHQASRATSAVADAIEDGVGVLRRAAKQG
Ga0209517_104322751	3300027854	Peatlands Soil	MSQTVVERTAEHIAASAHQASRATSAVADAIEDGVGVLRR
Ga0209167_105906261	3300027867	Surface Soil	MSQTVLERTAEHIAESAHQASRATSAVADAIEDGAGVVRRAARQSGEAAE
Ga0209380_105285472	3300027889	Soil	MSQTVAETTAEYVGESVRQASRATGAIADAVEDALGVVRRAAKQGGD
Ga0209067_106867601	3300027898	Watersheds	MSQTVLDRATERIAESARQASRATSAVADAIIEDGVGVV
Ga0302225_103004073	3300028780	Palsa	MPQTVVDRAVEHIDESARQVSRATSAIADAIEDGTGAVR
Ga0302221_102656682	3300028806	Palsa	MSQTVLERTADQIAESAHQASRATSAVAGAINDGVGAARRV
Ga0302197_105288682	3300028873	Bog	MSQAVVEETAGHIADSARRASCATNAVADAINDGAGVVKRAAKQG
Ga0308309_115026751	3300028906	Soil	VSQTVVERTAEQIGKSVRQASGATSAVADAIEDGVGAMK
Ga0246001_10846001	3300029889	Peat	MSQTVVERTADNITESAHQASRATCAIADAVEDGVGAVRHAAKQSCDAGEELL
Ga0311361_100779397	3300029911	Bog	MSQSLAEKAAERITESAHQASRASSAISDAIGDGVGV
Ga0311359_102833941	3300029914	Bog	MSQTIAEKTAETIANSANQSRRATGAIVDAIEDGVGVMRHA
Ga0302293_101757851	3300029981	Fen	MSQTVVERTAEHIAESAQQASRATSAVADAIRDGVGVVRRAAKQS
Ga0302188_100240694	3300029986	Bog	MSQTVVERAAEHVTESAQQASRAVSAIADAIEDGV
Ga0302176_104676671	3300030057	Palsa	VSQTLAEKTAEQIGNSARQASRATSAIADAIKDSVE
Ga0311349_114598731	3300030294	Fen	MSQTVVGRTAEHIAESAQQASRATSAVADAIRDGV
Ga0311360_101699491	3300030339	Bog	MSQTVVERTAEHIAESAQQASRATSAVADAIRDGVGVVRRAAK
Ga0311370_112464661	3300030503	Palsa	MAQTVLERTADHVTESAHQASRASSAVADAIADSAGAVRRAAKQ
Ga0311372_121113861	3300030520	Palsa	MPQTVVDRAVEHIDESARQVSRATSAIADAIEDGTGAVRRAAKQ
Ga0311355_102766351	3300030580	Palsa	MPQTVVDRAVEHIDESARQVSRATSAIADAIEDGTGAVRRAAKQGGDAAEEI
Ga0311356_107923901	3300030617	Palsa	MPQTVVDRAVEHIDESARQVSRATSAIADAIEDGTGAVRRAAKQGGDA
Ga0311354_108180591	3300030618	Palsa	VSQTLAEKTAEQIGNSARQASRATSAIADAIKDSVEVGRRAAKQGGDA
Ga0316363_101746131	3300030659	Peatlands Soil	MSQTVVERTAEHIAASAHQASRATSAVADAIEDGVGVLRRAAKQGGD
Ga0316363_102134121	3300030659	Peatlands Soil	MSQTVVERTAEHIGDSARRASRATSAIADAIEDGVG
Ga0265759_1096461	3300030913	Soil	MAQTVLERTADHITESAHQASRASSADADAIHDGVLVARSAA
Ga0170834_1054129201	3300031057	Forest Soil	MSQSVLERAADQVAESAHQASRATCAVGDAIEEGVEVV
Ga0302324_1028132111	3300031236	Palsa	MSQTVLEKTAEHITESARQASRATRAVADAIVGGGIGVVR
Ga0265340_102791701	3300031247	Rhizosphere	MSQTVVEKTAEHIGKSVRQASSATSAIADAIEDGVGVARRAAKQGGDAAE
Ga0265339_100581113	3300031249	Rhizosphere	MSQTVLDRTAERIAESARQASRTTSAVADAIMEDGMG
Ga0265331_101569671	3300031250	Rhizosphere	VSQTVAERTAEHITESAHQTSRATSAIADAFEDGLGVVRRAVK
Ga0265331_103535562	3300031250	Rhizosphere	MSQTVVEKTAEHIGKSVRQASSATSAIADAIEDGVGVAR
Ga0310686_1062930251	3300031708	Soil	MSQTVIERAADNITESAHQASRATTAIADAIEDGVGVARHAANQRF
Ga0265342_106629781	3300031712	Rhizosphere	MSPTVLEKTAEHIAESAHQASRATTAVADAIEDGV
Ga0307474_105581591	3300031718	Hardwood Forest Soil	MSQTVMDRTTERIAESARQASRATSAVADAIIEDGVGVVKRAAKQGGDA
Ga0307477_101407693	3300031753	Hardwood Forest Soil	MSQTVLDRTTERIAESARQASRATSAVADAIIEDGVGVVK
Ga0315741_117677572	3300032739	Forest Soil	MSQTVVERTAAHIADSAQRASRATSAVADAIKDGK
Ga0326727_106226141	3300033405	Peat Soil	MSQTVVEKTADNIAESAHQASRATCAIADAVESGVGAVQLAAKHSCDA
Ga0371488_0165004_2_151	3300033983	Peat Soil	MSQTVAERTADHIDESSQQASRAANAMADAIGDGIGAVRRAAKQGGDAAE
Ga0370484_0126143_2_112	3300034125	Untreated Peat Soil	MSQTAAERTAEHIGETARQASRATCAIADAIEDGVGV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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