Metagenome / Metatranscriptome Family F068245

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068245
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	51 residues
Representative Sequence	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLGDRSSGDPAQEPDYRRWA
Number of Associated Samples	85
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.00 %
% of genes near scaffold ends (potentially truncated)	37.60 %
% of genes from short scaffolds (< 2000 bps)	82.40 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.800 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.000 % of family members)
Environment Ontology (ENVO)	Unclassified (39.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.97% β-sheet: 0.00% Coil/Unstructured: 62.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04775	Bile_Hydr_Trans	12.80
PF12680	SnoaL_2	7.20
PF08840	BAAT_C	5.60
PF03551	PadR	2.40
PF00583	Acetyltransf_1	2.40
PF04191	PEMT	1.60
PF08327	AHSA1	1.60
PF00144	Beta-lactamase	1.60
PF00436	SSB	1.60
PF12847	Methyltransf_18	0.80
PF10706	Aminoglyc_resit	0.80
PF03795	YCII	0.80
PF08281	Sigma70_r4_2	0.80
PF02283	CobU	0.80
PF12323	HTH_OrfB_IS605	0.80
PF01636	APH	0.80
PF14552	Tautomerase_2	0.80
PF01361	Tautomerase	0.80
PF04978	DUF664	0.80
PF13419	HAD_2	0.80
PF07110	EthD	0.80
PF00664	ABC_membrane	0.80
PF01970	TctA	0.80
PF00406	ADK	0.80
PF12697	Abhydrolase_6	0.80
PF01425	Amidase	0.80
PF01906	YbjQ_1	0.80
PF12833	HTH_18	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.40
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.40
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.40
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.60
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.60
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.60
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.60
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.60
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.80
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.80
COG1784	TctA family transporter	General function prediction only [R]	0.80
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG2087	Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase	Coenzyme transport and metabolism [H]	0.80
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG3333	TctA family transporter	General function prediction only [R]	0.80
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
All Organisms	root	All Organisms	43.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
cellular organisms	root	All Organisms → cellular organisms	43.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.60 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	8.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.40 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.80 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	6.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.60 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.80 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	6.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.80 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.80 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.80 %
Glycomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	6.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
unclassified Glycomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces	0.80 %
Dactylosporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	0.80 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.80 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.80 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	6.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Glycomyces sp. L485	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces → Glycomyces sp. L485	0.80 %
Dactylosporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	0.80 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.80 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10079355	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300001431\|F14TB_100246555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1173	Open in IMG/M
3300001431\|F14TB_100524781	Not Available	509	Open in IMG/M
3300001431\|F14TB_101298295	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300003373\|JGI25407J50210_10034126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1312	Open in IMG/M
3300003373\|JGI25407J50210_10036509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1264	Open in IMG/M
3300003373\|JGI25407J50210_10059685	Not Available	959	Open in IMG/M
3300005545\|Ga0070695_100707113	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005562\|Ga0058697_10023241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2191	Open in IMG/M
3300005562\|Ga0058697_10080317	Not Available	1315	Open in IMG/M
3300005562\|Ga0058697_10730331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	530	Open in IMG/M
3300005719\|Ga0068861_100726337	All Organisms → cellular organisms → Bacteria → Terrabacteria group	925	Open in IMG/M
3300005981\|Ga0081538_10016244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5719	Open in IMG/M
3300005981\|Ga0081538_10040604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2965	Open in IMG/M
3300005981\|Ga0081538_10049377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2552	Open in IMG/M
3300005981\|Ga0081538_10148650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1065	Open in IMG/M
3300005983\|Ga0081540_1210601	Not Available	699	Open in IMG/M
3300006844\|Ga0075428_101559888	Not Available	691	Open in IMG/M
3300006845\|Ga0075421_102052393	Not Available	608	Open in IMG/M
3300006846\|Ga0075430_100866130	Not Available	744	Open in IMG/M
3300006847\|Ga0075431_100585385	Not Available	1101	Open in IMG/M
3300006847\|Ga0075431_101065459	Not Available	774	Open in IMG/M
3300009093\|Ga0105240_12161027	Not Available	577	Open in IMG/M
3300009098\|Ga0105245_12298848	Not Available	593	Open in IMG/M
3300009789\|Ga0126307_10027654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4344	Open in IMG/M
3300009789\|Ga0126307_10115379	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300009789\|Ga0126307_10117102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2119	Open in IMG/M
3300009789\|Ga0126307_10163710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1782	Open in IMG/M
3300009810\|Ga0105088_1104690	Not Available	527	Open in IMG/M
3300009840\|Ga0126313_10004743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8058	Open in IMG/M
3300009840\|Ga0126313_10045031	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300009840\|Ga0126313_10521526	Not Available	953	Open in IMG/M
3300010037\|Ga0126304_10050203	All Organisms → cellular organisms → Bacteria	2531	Open in IMG/M
3300010038\|Ga0126315_10390134	Not Available	874	Open in IMG/M
3300010038\|Ga0126315_10499698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300010038\|Ga0126315_10877577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	595	Open in IMG/M
3300010040\|Ga0126308_10006098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5737	Open in IMG/M
3300010040\|Ga0126308_10023208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3372	Open in IMG/M
3300010040\|Ga0126308_11308008	Not Available	515	Open in IMG/M
3300010041\|Ga0126312_10074119	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300010041\|Ga0126312_10921780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300010042\|Ga0126314_10079819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2190	Open in IMG/M
3300010145\|Ga0126321_1182115	Not Available	692	Open in IMG/M
3300010166\|Ga0126306_10260712	Not Available	1325	Open in IMG/M
3300011000\|Ga0138513_100062568	Not Available	571	Open in IMG/M
3300012937\|Ga0162653_100010071	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1124	Open in IMG/M
3300012937\|Ga0162653_100041342	Not Available	695	Open in IMG/M
3300013306\|Ga0163162_11176519	Not Available	870	Open in IMG/M
3300014487\|Ga0182000_10177313	Not Available	796	Open in IMG/M
3300014497\|Ga0182008_10586702	Not Available	624	Open in IMG/M
3300017965\|Ga0190266_10825574	Not Available	598	Open in IMG/M
3300018066\|Ga0184617_1144689	Not Available	693	Open in IMG/M
3300018072\|Ga0184635_10159638	Not Available	901	Open in IMG/M
3300018073\|Ga0184624_10478635	Not Available	544	Open in IMG/M
3300018081\|Ga0184625_10057558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1956	Open in IMG/M
3300018422\|Ga0190265_11643545	Not Available	753	Open in IMG/M
3300018465\|Ga0190269_10122154	Not Available	1308	Open in IMG/M
3300018465\|Ga0190269_11182925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	599	Open in IMG/M
3300018466\|Ga0190268_10550320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300018466\|Ga0190268_11300845	Not Available	613	Open in IMG/M
3300018469\|Ga0190270_12850157	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300019867\|Ga0193704_1048879	Not Available	830	Open in IMG/M
3300021073\|Ga0210378_10331568	Not Available	569	Open in IMG/M
3300021078\|Ga0210381_10013348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2046	Open in IMG/M
3300022195\|Ga0222625_1250280	Not Available	516	Open in IMG/M
3300022534\|Ga0224452_1274813	Not Available	514	Open in IMG/M
3300026704\|Ga0208581_106231	Not Available	531	Open in IMG/M
3300027750\|Ga0209461_10004913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2207	Open in IMG/M
3300027750\|Ga0209461_10035487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	966	Open in IMG/M
3300028587\|Ga0247828_10250681	Not Available	951	Open in IMG/M
3300028711\|Ga0307293_10092141	Not Available	959	Open in IMG/M
3300028712\|Ga0307285_10081889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	837	Open in IMG/M
3300028713\|Ga0307303_10119373	Not Available	616	Open in IMG/M
3300028715\|Ga0307313_10022381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → unclassified Glycomyces → Glycomyces sp. L485	1729	Open in IMG/M
3300028716\|Ga0307311_10163935	Not Available	643	Open in IMG/M
3300028719\|Ga0307301_10018309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2033	Open in IMG/M
3300028719\|Ga0307301_10236042	Not Available	596	Open in IMG/M
3300028721\|Ga0307315_10011397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2208	Open in IMG/M
3300028721\|Ga0307315_10204505	Not Available	612	Open in IMG/M
3300028744\|Ga0307318_10025993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1895	Open in IMG/M
3300028771\|Ga0307320_10027455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2068	Open in IMG/M
3300028784\|Ga0307282_10461144	Not Available	617	Open in IMG/M
3300028791\|Ga0307290_10132844	Not Available	911	Open in IMG/M
3300028791\|Ga0307290_10175847	Not Available	785	Open in IMG/M
3300028796\|Ga0307287_10087504	Not Available	1171	Open in IMG/M
3300028799\|Ga0307284_10172479	Not Available	842	Open in IMG/M
3300028809\|Ga0247824_10208465	Not Available	1071	Open in IMG/M
3300028810\|Ga0307294_10272257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	607	Open in IMG/M
3300028814\|Ga0307302_10477402	Not Available	618	Open in IMG/M
3300028880\|Ga0307300_10072153	Not Available	1008	Open in IMG/M
3300030496\|Ga0268240_10007027	Not Available	1775	Open in IMG/M
3300030496\|Ga0268240_10194280	Not Available	516	Open in IMG/M
3300030829\|Ga0308203_1032779	Not Available	731	Open in IMG/M
3300030830\|Ga0308205_1014627	Not Available	844	Open in IMG/M
3300030830\|Ga0308205_1025800	Not Available	698	Open in IMG/M
3300030830\|Ga0308205_1036546	Not Available	618	Open in IMG/M
3300030902\|Ga0308202_1087891	Not Available	626	Open in IMG/M
3300030902\|Ga0308202_1144880	Not Available	525	Open in IMG/M
3300030903\|Ga0308206_1040133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	890	Open in IMG/M
3300030903\|Ga0308206_1067862	Not Available	744	Open in IMG/M
3300030903\|Ga0308206_1177737	Not Available	528	Open in IMG/M
3300030993\|Ga0308190_1077793	Not Available	691	Open in IMG/M
3300031058\|Ga0308189_10229495	Not Available	689	Open in IMG/M
3300031091\|Ga0308201_10033602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1184	Open in IMG/M
3300031091\|Ga0308201_10379410	Not Available	526	Open in IMG/M
3300031092\|Ga0308204_10078828	Not Available	866	Open in IMG/M
3300031092\|Ga0308204_10228741	Not Available	593	Open in IMG/M
3300031092\|Ga0308204_10339989	Not Available	514	Open in IMG/M
3300031094\|Ga0308199_1082333	Not Available	683	Open in IMG/M
3300031094\|Ga0308199_1123597	Not Available	592	Open in IMG/M
3300031548\|Ga0307408_100172734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1727	Open in IMG/M
3300031548\|Ga0307408_101776846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300031731\|Ga0307405_10050804	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300031731\|Ga0307405_10874336	Not Available	758	Open in IMG/M
3300031824\|Ga0307413_10270928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1271	Open in IMG/M
3300031824\|Ga0307413_12009616	Not Available	521	Open in IMG/M
3300031852\|Ga0307410_10664614	Not Available	875	Open in IMG/M
3300031901\|Ga0307406_11345282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300031903\|Ga0307407_10567992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300031911\|Ga0307412_11434421	Not Available	626	Open in IMG/M
3300031995\|Ga0307409_100108122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2325	Open in IMG/M
3300032002\|Ga0307416_100121491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2329	Open in IMG/M
3300032005\|Ga0307411_10304442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1280	Open in IMG/M
3300032159\|Ga0268251_10097291	Not Available	1044	Open in IMG/M
3300034174\|Ga0334932_009956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.40%
Host-Associated	Host-Associated	29.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.20%
Plants	Host-Associated → Plants	29.60%
Aquatic	Environmental → Aquatic	7.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.80%
Roots	Host-Associated → Plants → Roots	5.60%
Sediment	Environmental → Aquatic → Sediment	4.00%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Phylloplane	Host-Associated → Plants → Phylloplane	3.20%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.60%
Loam	Environmental → Terrestrial → Soil → Loam	4.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.80%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.40%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	5.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.20%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.20%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026704	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN606 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_100793552	3300000550	Soil	MTVLVNGLLWFAMFAIPMLIAVILRRLGRKYGVGDRGDPAQEPDYRRWA*
F14TB_1002465551	3300001431	Soil	AMFAIPMMIAVMLRRLGRKYGLGDRGDPAQEPDYRRWA*
F14TB_1005247811	3300001431	Soil	AMFAIPMTIAVVLRRLGRKYGLDDRGDPAQEPDYRRWA*
F14TB_1012982951	3300001431	Soil	MTVLVNGLLWFAMFAIPMLIAVMLRRRGRKYGLGDPGDPAQEPDYRRWA*
JGI25407J50210_100341262	3300003373	Tabebuia Heterophylla Rhizosphere	MTALVNGLLWFGMFAIPMLIVVILRRLGRRRGFNERYWLGDPTQDPDYRRWQ*
JGI25407J50210_100365093	3300003373	Tabebuia Heterophylla Rhizosphere	MTALVNGLLWFAMFAIPMLIAVILRRLGRKYYTPGDPSQEPDYRRWA*
JGI25407J50210_100596851	3300003373	Tabebuia Heterophylla Rhizosphere	MDALVNGLLWFAIFAIPMMIAVILRRLGRKYGLDARSPSEDPAQEPDYRRWR*
Ga0070695_1007071132	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTALVNGLLWFGMFAIPMLIAVILRCRARKYGLADGTSGDPAQEPDYRRWA*
Ga0058697_100232414	3300005562	Agave	MDALVNGLLWFAIFAIPMSIAVILRRLGRKYGLDAPTPSEDPSQEPDYRRWK*
Ga0058697_100803173	3300005562	Agave	MNAVVNGLLWFAMFAIPMTIAVVLRRLGRKYGLDDRGDPAQEPDYRRWA*
Ga0058697_107303312	3300005562	Agave	MTALGNALLWFAMFAIPMGIAVILRRLARKFRVDDGYGPGDPAQEPDYRRWA*
Ga0068861_1007263372	3300005719	Switchgrass Rhizosphere	MTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA*
Ga0081538_100162448	3300005981	Tabebuia Heterophylla Rhizosphere	MTTLVNGLLWFGMFAIPMLIAVILRRLARRYGLDPFTPGDPSQEPDYRRWG*
Ga0081538_100406045	3300005981	Tabebuia Heterophylla Rhizosphere	MPALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGEGGDPAQEPDYRRWA*
Ga0081538_100493773	3300005981	Tabebuia Heterophylla Rhizosphere	MNAFMNGLLWFAMFAIPMMIAVMLRRLGRKYGLGDPGDPAQEPDYRRWA*
Ga0081538_101486502	3300005981	Tabebuia Heterophylla Rhizosphere	MNAVVNGLLWLAMFAIPMAIAVMLRRLGRKYGLGDPGDPAQEPDYRRWA*
Ga0081540_12106012	3300005983	Tabebuia Heterophylla Rhizosphere	MTALVNGLLWFAMFAIPMTIAVILRRLGRRYGVGDSGDPAQEPDYRRWA*
Ga0075428_1015598882	3300006844	Populus Rhizosphere	MNAAVNGLLWFGIFAIPMLIAVILRRLGRKYGVGDRGDPAQEPDYRRWA*
Ga0075421_1020523932	3300006845	Populus Rhizosphere	MNAVVNGLLWFGIFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA*
Ga0075430_1008661301	3300006846	Populus Rhizosphere	LLWFGIFAIPMLIAVILRRLGRKYGLGDRGDPAQEPDYRRWA*
Ga0075431_1005853852	3300006847	Populus Rhizosphere	MNAVVNGLLWFGMFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA*
Ga0075431_1010654592	3300006847	Populus Rhizosphere	RVMNAVVNGLLWFGIFAIPMLIAVILRRLGRKYGLGDRGDPAQEPDYRRWA*
Ga0105240_121610271	3300009093	Corn Rhizosphere	MTALVNGLLWFGMFAIPMLIAVILRRRARTYGLADGTSGDPAQEPDYRRWA*
Ga0105245_122988482	3300009098	Miscanthus Rhizosphere	MTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWT*
Ga0126307_100276545	3300009789	Serpentine Soil	MDALVNGLLWLGMFAIPMLIAVILRRLGRKYGLDDRYGAGDPAQEPDYRRWA*
Ga0126307_101153791	3300009789	Serpentine Soil	RRVMTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSGDPAQEPDYRRWA*
Ga0126307_101171021	3300009789	Serpentine Soil	MTALENGLLWFGMFAIPMLIAVILRRLGRKYGLDDRYTSGDPSREPDYRRWA*
Ga0126307_101637101	3300009789	Serpentine Soil	RRVMTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSRDPAQEPDYRRWA*
Ga0105088_11046902	3300009810	Groundwater Sand	MNAVVNGLLWFGMFAIPMLIAVILRRLGRRYGLGDREDPAQEPDYRRWA*
Ga0126313_1000474312	3300009840	Serpentine Soil	MDALVNGLLWFGMFAIPMMIAVILRRLGRRYGLGERGDPAQEPDYRRWG*
Ga0126313_100450311	3300009840	Serpentine Soil	MNAVVNGLLWFAMFAIPMTIAVVLRRLGRKYGLDDRGDPTQEPDYRRWA*
Ga0126313_105215262	3300009840	Serpentine Soil	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSGDPAQEPDYRRWA*
Ga0126304_100502032	3300010037	Serpentine Soil	MHQVRPERRVMTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSRDPAQEPDYRRWA*
Ga0126315_103901342	3300010038	Serpentine Soil	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSRDPAQEPDYRRWA*
Ga0126315_104996983	3300010038	Serpentine Soil	MNALVNGLLWLGTFAIPMLIAVILRRLGRKYGLDDRYAAGDPAQEPDYRRW
Ga0126315_108775772	3300010038	Serpentine Soil	MDALVNGLLWLGMFAIPMLIAVILRRLGRKYGLDDRYAAGDPAQEPD
Ga0126308_100060983	3300010040	Serpentine Soil	MTALENGLLWFGMFAIPMLIAVILRRLGRKYGLDDRCTSGDPSREPDYRRWA*
Ga0126308_100232082	3300010040	Serpentine Soil	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSFRDPAQEPDYRRWA*
Ga0126308_113080082	3300010040	Serpentine Soil	MTALVNGLLWFAMFAIPMLIAVILRRRARKYGLDDRYGDPSQEPDYRRWA*
Ga0126312_100741191	3300010041	Serpentine Soil	PERRVMTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSGDPAQEPDYRRWA*
Ga0126312_109217802	3300010041	Serpentine Soil	MTALENGLLWFGMFAIPMPIAVILRRLGRKYGLDDRYTSGDPSREPDYRRWA*
Ga0126314_100798191	3300010042	Serpentine Soil	MNALVNGLLWLGTFAIPMLIAVILRRLGRKYGLDDRYAAGDPAQEPDYRRWG*
Ga0126321_11821152	3300010145	Soil	MNAVVNGLLWFAMFAIPMLIAVVLRRLGRKYGLGDRGDPAQEPDYRRWA*
Ga0126306_102607122	3300010166	Serpentine Soil	MHQVRPERRVMTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSGDPAQEPDYRRWA*
Ga0138513_1000625681	3300011000	Soil	MNAVVNGLLWFGIFAIPMLIAVLLRHLGRKYGVGDRGDPAQEPDYRRWA*
Ga0162653_1000100712	3300012937	Soil	MNAVVNGLLWFAMFAIPMMIAVILRRLARKYGVDDRYTSGDPAQEPDYRRWA*
Ga0162653_1000413422	3300012937	Soil	PGPERRVMNTLVNGLLWFGIFAIPMLIGVILRRLGRKYGLDARSPSEDPAQEPDYRRWA*
Ga0163162_111765191	3300013306	Switchgrass Rhizosphere	MTALVNGLLWFGMFAIPMLIAVILRCRARKYGLGDGTSGDPAQEPDYRRWA*
Ga0182000_101773131	3300014487	Soil	MTALVNGLLWFATFAVPMTIAVILRRRARKYYAPGDPAQEPDYQR
Ga0182008_105867021	3300014497	Rhizosphere	MNAVVNGLLWFAMFAIPMMIAVMLRCLGRKYGLGERGDPAQEPDYRRWA*
Ga0190266_108255742	3300017965	Soil	MNAVVNGLLWFGIFAIPMLIAVILRRRARKSGVGDGASGDPAQEPDYRRWA
Ga0184617_11446892	3300018066	Groundwater Sediment	MTALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLADLTSGDPAQEPDYRRWA
Ga0184635_101596382	3300018072	Groundwater Sediment	MNAVVNGLLWFGIFAIPMLIAVILRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0184624_104786352	3300018073	Groundwater Sediment	MNAVVNGLLWFGIFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0184625_100575582	3300018081	Groundwater Sediment	ERSVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0190265_116435452	3300018422	Soil	MDALVNGLLWFGIFAIPMMIAVILRRLGRKYGLDARSPSEDPSQEPDYRRWG
Ga0190269_101221543	3300018465	Soil	MNAVVNGLMWFGIFAIPMLIAVFLRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0190269_111829251	3300018465	Soil	MEALVNGLLWFGMFAIPMLIVVILRRLGRKYGLDDRSGPGDPAQ
Ga0190268_105503201	3300018466	Soil	GARRTRGLYWARILDGYAPSPERSVMTALMNGLLWFAMFAIPMLIAVILRRLGRKYYTPGDPSQEPDYRRWA
Ga0190268_113008452	3300018466	Soil	MNAAVNGLLWFGIFAIPMLIAVILRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0190270_128501571	3300018469	Soil	MNAVVNGLLWFGIFAIPMLIAVVLRRLGRKYGVGGRGDPAQEPDYRRWA
Ga0193704_10488791	3300019867	Soil	MTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0210378_103315681	3300021073	Groundwater Sediment	ESLDGSAPSLERCVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0210381_100133482	3300021078	Groundwater Sediment	MTALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLDDRYGDPAQEPDYRRWA
Ga0222625_12502802	3300022195	Groundwater Sediment	GHAPGPERRVMNAVVNGLLWFGIFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0224452_12748131	3300022534	Groundwater Sediment	MNALVNGLLWFAMFAIPMTIAVMLRRIGRKYGLGDRGDPAQEPDYRRWA
Ga0208581_1062311	3300026704	Soil	MNAVVNGLLWFAMFAIPMTIAVVLRRLGRKYGLDDRGDPAQEPDYRRWA
Ga0209461_100049134	3300027750	Agave	MDALVNGLLWFAIFAIPMSIAVMLRRLGRKYGLDAPTPSEDPSQEPDYRRWK
Ga0209461_100354871	3300027750	Agave	MNAAVNGLLWFAMFAIPMMIAVMLRRLGRKYGLGDRGDPAQEPDYRRWA
Ga0247828_102506812	3300028587	Soil	MNAVVNGLLWFGTFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0307293_100921411	3300028711	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGAGSPSEDPSQEPDYRRWG
Ga0307285_100818891	3300028712	Soil	TGHEAWTGHAPGPERRVMTALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLADLTSGDPAQEPDYRRWA
Ga0307303_101193732	3300028713	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRRYGLGAGSPSEDPSQEPDYRRWG
Ga0307313_100223811	3300028715	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGAGSPSEDPSQEPDYRRWR
Ga0307311_101639351	3300028716	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLDAGSPSEDPSQEPDYRRWG
Ga0307301_100183092	3300028719	Soil	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLGDRSSGDPAQEPDYRRWA
Ga0307301_102360422	3300028719	Soil	ALVNGLLWFAMFAIPMMIAVILRRRGRKYGFDDGYGDPAQEPDYRRWA
Ga0307315_100113971	3300028721	Soil	LDGSAPSLERCVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0307315_102045051	3300028721	Soil	MTALMNGLLWFAMFAIPMVIAVILRRLGRRYGVDTSSPSEDPAQEP
Ga0307318_100259931	3300028744	Soil	MTALENGLLWFGMFAIPMLIAVILRRLGRKYGVDDRYTSGDPAQEPDYRRWA
Ga0307320_100274552	3300028771	Soil	MTALENGLLWFGMFAIPMLIAVILRRLGRKYGLDDRYTSGDPSREPDYRRWA
Ga0307282_104611441	3300028784	Soil	ERCVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0307290_101328442	3300028791	Soil	PMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0307290_101758471	3300028791	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRRYGVDTSSPSEDPAQEPDYRRWG
Ga0307287_100875042	3300028796	Soil	MTALVNGLLWFAMFAIPMMIAVILRRRGRKYGFDDGYGDPAQEPDYRRWA
Ga0307284_101724793	3300028799	Soil	MTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGAVSPSEDPSQEPDYRRWG
Ga0247824_102084651	3300028809	Soil	MNAVVNGLLWFGMFAIPMLIAVVLRRLGRKYGVGDRGDNAQEPDYRRWA
Ga0307294_102722572	3300028810	Soil	MTALVNGLLWFGMFAIPMLIAVILRRRARKYGVGDGASGDPAQEPDYRRWA
Ga0307302_104774022	3300028814	Soil	WFGIFAIPMLIAVVLRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0307300_100721532	3300028880	Soil	MTALVNGLLWFAMFAIPMMVAVILRRLGRRYGLGAGSPSEDPSQEPDYRRWG
Ga0268240_100070271	3300030496	Soil	LLWFAMFAIPMMVAVILRRLGRKYGLGDGGDPAQEPDYRRWG
Ga0268240_101942801	3300030496	Soil	MNALVNGLLWFAMFAIPMMVAVILRRLGRKYGLGDGGDPAQEPDYRRWA
Ga0308203_10327792	3300030829	Soil	VMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0308205_10146271	3300030830	Soil	MTALVNGLLWFWMFAIPMLIAVMLRRRGRKYGLADLTSGDPAQEPDYRRWA
Ga0308205_10258002	3300030830	Soil	SPERRVMNALVNGLLWFAMFAIPMTIAVMLRRIGRKYGLGDRGDPAQEPDYRRWA
Ga0308205_10365461	3300030830	Soil	AGPERRVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0308202_10878911	3300030902	Soil	ASAGPERRVMTALVNGLLWFAMFAIPMVIAVILRRLGRRYGVDTSSPSEDPAQEPDYRRW
Ga0308202_11448801	3300030902	Soil	SAQGPERRVMTALVNGLLWFAMFAIPMMVAVILRRLGRRYGLGAGSPSEDPSQEPDYRRW
Ga0308206_10401331	3300030903	Soil	ALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLADLTSGDPAQEPDYRRWA
Ga0308206_10678622	3300030903	Soil	ASPERRVMNALVNGLLWFAMFAIPMTIAVMLRRIGRKYGLGDRGDPAQEPDYRRWA
Ga0308206_11777372	3300030903	Soil	VMTALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLDDRYGDPAQEPDYRRWA
Ga0308190_10777932	3300030993	Soil	SAQGPERRVMTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGAGSPSEDPSQEPDYRRW
Ga0308189_102294951	3300031058	Soil	AGPERRVMTALVNGLLWFAMFAIPMVIAVILRRLGRRYGVDTSSPSEDPAQEPDYRRWG
Ga0308201_100336021	3300031091	Soil	SSLERCVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0308201_103794101	3300031091	Soil	FAMFAIPMLIAIILRRLGRKYGLDARSPSEDPAQEPDYRRWG
Ga0308204_100788281	3300031092	Soil	PSLERSVMTALVNGLLWFGMFAIPMLIAVILRRRARKYGLADGTSGDPAQEPDYRRWA
Ga0308204_102287412	3300031092	Soil	ASAGPERRVMTALVNGLLWFAMFAIPMMIAVILRRLGRKYGVGDRGDPAQEPDYRRWA
Ga0308204_103399891	3300031092	Soil	ERRVMTALVNGLLWFGMFAIPMLIAVMLRRRGRKYGLADLTSGDPAQEPDYRRWA
Ga0308199_10823331	3300031094	Soil	RSGQGPERRVMTALVNGLLWFAMFAIPMMIAVILRRLGRKYGLGAGSPSEDPSQEPDYRRWR
Ga0308199_11235971	3300031094	Soil	VMTALMNGLLWFAMFAIPMLIAIILRRLGRKYGLDARSPSEDPAQEPDYRRWG
Ga0307408_1001727341	3300031548	Rhizosphere	MTALMNGLLWFGIFAIPMLIAVILRRLGRKYGLADLSSRDPAQEPDYRRWA
Ga0307408_1017768462	3300031548	Rhizosphere	MTTLMNGLLWFGIFAIPMLIAVILRRLARKYYAPGDPSQEPDYRRWG
Ga0307405_100508044	3300031731	Rhizosphere	MDALVNGLLWFGMFAIPMMIAVILRRLGRRYGLGERGDPAQEPDYRRWG
Ga0307405_108743362	3300031731	Rhizosphere	MTALENGLLWFGMFAIPMLIAVILRRLGRKYGLDDRCTSGDPSREPDYRRWA
Ga0307413_102709282	3300031824	Rhizosphere	MNAVVNGLLWFAMFAIPMTIALVLRRLGRKYGLDDRGDPAQEPDYRRWA
Ga0307413_120096161	3300031824	Rhizosphere	MDALVNGLLWFGMFAIPMMIAVILRRLGRRYGLGERGDPAQEPDYR
Ga0307410_106646142	3300031852	Rhizosphere	WAGHVPGPERRVMNAVVNGLLWFAMFAIPMTIAVVLRRLGRKYGLDDRGDPAQEPDYRRW
Ga0307406_113452821	3300031901	Rhizosphere	MTTLVNGLLWFGIFAIPMLIAIILRRLARKYSAPGDPSQEPDYRRWG
Ga0307407_105679922	3300031903	Rhizosphere	MTTLVNSLLWFGIFAIPMLIAIMLRRLARKYYAPGDPSQEPDYQRWG
Ga0307412_114344212	3300031911	Rhizosphere	PKRRVMTALVNGLLWFAMFAIPMLIAVILRRRARKYGLDDRYGDPSQEPDYRRWA
Ga0307409_1001081225	3300031995	Rhizosphere	MNALMNGLLWFAMFAIPMMIVVILRRLGRKYGLDDRSTPGDPAQEPDYRRWA
Ga0307416_1001214911	3300032002	Rhizosphere	MTTLVNGLLWFGIFAIPMLIAIILRRLARKYSAPGDPSQEPDYR
Ga0307411_103044422	3300032005	Rhizosphere	MTALENGLLWFGMFAIPMLIAVILRRRARKYGVGASGDPAQEPDYRRWA
Ga0268251_100972911	3300032159	Agave	MDALVNGLLWFAIFAIPMSIAVILRRLGRKYGLDAPTPSEDPSQEPDYRRWK
Ga0334932_009956_1053_1196	3300034174	Sub-Biocrust Soil	MTALVNGLLWFAMFAIPMMIAVILRRLARKHYAPGDPAQEPDYQRWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068245

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences