Metagenome / Metatranscriptome Family F068258

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F068258
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	75 residues
Representative Sequence	VMYWAVTAQGHGFRLSTVGVILMAVGAVGLVVSTVIFATSRRPSGSRHHTYDREVTDSQGGSTAVHEEVH
Number of Associated Samples	85
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.20 %
% of genes near scaffold ends (potentially truncated)	59.20 %
% of genes from short scaffolds (< 2000 bps)	79.20 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (18.400 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.51% β-sheet: 8.16% Coil/Unstructured: 66.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF05532	CsbD	14.52
PF12802	MarR_2	4.03
PF05239	PRC	3.23
PF03861	ANTAR	3.23
PF07690	MFS_1	3.23
PF14518	Haem_oxygenas_2	2.42
PF03358	FMN_red	2.42
PF13185	GAF_2	2.42
PF00486	Trans_reg_C	1.61
PF13413	HTH_25	1.61
PF11999	Ice_binding	1.61
PF00561	Abhydrolase_1	1.61
PF13432	TPR_16	0.81
PF13336	AcetylCoA_hyd_C	0.81
PF13466	STAS_2	0.81
PF08327	AHSA1	0.81
PF00005	ABC_tran	0.81
PF00563	EAL	0.81
PF00313	CSD	0.81
PF08448	PAS_4	0.81
PF10756	bPH_6	0.81
PF13460	NAD_binding_10	0.81
PF00809	Pterin_bind	0.81
PF01618	MotA_ExbB	0.81
PF13520	AA_permease_2	0.81
PF11716	MDMPI_N	0.81
PF12840	HTH_20	0.81
PF13531	SBP_bac_11	0.81
PF13340	DUF4096	0.81
PF02702	KdpD	0.81
PF01947	Rv2949c-like	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	14.52
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	3.23
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.81
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.81
COG3161	4-hydroxybenzoate synthetase (chorismate-pyruvate lyase)	Coenzyme transport and metabolism [H]	0.81
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.81
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.81
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.80 %
Unclassified	root	N/A	31.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.80 %
Unclassified	root	N/A	31.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.80 %
Unclassified	root	N/A	31.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.60 %
Unclassified	root	N/A	31.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.60 %
Unclassified	root	N/A	31.20 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	15.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.60 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	15.20 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.40 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.60 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.80 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	15.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.80 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.80 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	15.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.80 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.80 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	15.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
unclassified Jatrophihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans	0.80 %
Phycicoccus elongatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	0.80 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	15.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Jatrophihabitans sp. GAS493	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	0.80 %
Phycicoccus elongatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	0.80 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02I0DFY	Not Available	513	Open in IMG/M
3300001356\|JGI12269J14319_10000335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44425	Open in IMG/M
3300001356\|JGI12269J14319_10018155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5165	Open in IMG/M
3300001408\|JGI20206J14855_1006504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2244	Open in IMG/M
3300001532\|A20PFW1_1143095	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300004080\|Ga0062385_10939432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300004082\|Ga0062384_101310153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	530	Open in IMG/M
3300004099\|Ga0058900_1351744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	506	Open in IMG/M
3300005534\|Ga0070735_10103600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1791	Open in IMG/M
3300005534\|Ga0070735_10297013	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005537\|Ga0070730_10687476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300005541\|Ga0070733_10344930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	987	Open in IMG/M
3300005542\|Ga0070732_10056292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2277	Open in IMG/M
3300005861\|Ga0080006_1140626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25361	Open in IMG/M
3300006055\|Ga0097691_1000335	All Organisms → cellular organisms → Bacteria	42690	Open in IMG/M
3300006893\|Ga0073928_10739696	Not Available	683	Open in IMG/M
3300009521\|Ga0116222_1166829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	948	Open in IMG/M
3300009523\|Ga0116221_1241454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300009523\|Ga0116221_1270195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	735	Open in IMG/M
3300009524\|Ga0116225_1268157	Not Available	764	Open in IMG/M
3300009524\|Ga0116225_1530995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300009525\|Ga0116220_10106673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300009630\|Ga0116114_1049171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300009643\|Ga0116110_1143772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	790	Open in IMG/M
3300009672\|Ga0116215_1375381	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300009672\|Ga0116215_1417538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	580	Open in IMG/M
3300009683\|Ga0116224_10248521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	849	Open in IMG/M
3300009683\|Ga0116224_10606458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300009698\|Ga0116216_10053445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2491	Open in IMG/M
3300009700\|Ga0116217_10592898	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300009824\|Ga0116219_10379033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	790	Open in IMG/M
3300010341\|Ga0074045_10578688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	717	Open in IMG/M
3300010379\|Ga0136449_100001466	All Organisms → cellular organisms → Bacteria	71103	Open in IMG/M
3300010379\|Ga0136449_100193763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3882	Open in IMG/M
3300010379\|Ga0136449_101768985	Not Available	927	Open in IMG/M
3300010379\|Ga0136449_102976477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	662	Open in IMG/M
3300011120\|Ga0150983_14706232	Not Available	1464	Open in IMG/M
3300011120\|Ga0150983_14706232	Not Available	1464	Open in IMG/M
3300011120\|Ga0150983_16577939	Not Available	546	Open in IMG/M
3300014156\|Ga0181518_10503744	Not Available	573	Open in IMG/M
3300014164\|Ga0181532_10009886	All Organisms → cellular organisms → Bacteria	7512	Open in IMG/M
3300014165\|Ga0181523_10008409	All Organisms → cellular organisms → Bacteria	7800	Open in IMG/M
3300014169\|Ga0181531_10652249	Not Available	653	Open in IMG/M
3300014489\|Ga0182018_10005008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10852	Open in IMG/M
3300014489\|Ga0182018_10138155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1400	Open in IMG/M
3300014489\|Ga0182018_10533655	Not Available	619	Open in IMG/M
3300014491\|Ga0182014_10276622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	870	Open in IMG/M
3300014494\|Ga0182017_10878101	Not Available	540	Open in IMG/M
3300014495\|Ga0182015_10008057	All Organisms → cellular organisms → Bacteria	10126	Open in IMG/M
3300014495\|Ga0182015_10141843	Not Available	1638	Open in IMG/M
3300014495\|Ga0182015_10465832	Not Available	810	Open in IMG/M
3300014495\|Ga0182015_10582013	Not Available	711	Open in IMG/M
3300014495\|Ga0182015_10751113	Not Available	614	Open in IMG/M
3300014495\|Ga0182015_10780566	Not Available	600	Open in IMG/M
3300014495\|Ga0182015_10856289	Not Available	570	Open in IMG/M
3300014501\|Ga0182024_10032474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8890	Open in IMG/M
3300014501\|Ga0182024_10269635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2269	Open in IMG/M
3300014501\|Ga0182024_10646266	Not Available	1315	Open in IMG/M
3300014501\|Ga0182024_10658438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300014501\|Ga0182024_11175320	Not Available	899	Open in IMG/M
3300014501\|Ga0182024_11303647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	842	Open in IMG/M
3300014501\|Ga0182024_11504144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	768	Open in IMG/M
3300014501\|Ga0182024_11905240	Not Available	661	Open in IMG/M
3300014838\|Ga0182030_10420593	Not Available	1379	Open in IMG/M
3300015198\|Ga0167625_1040867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1491	Open in IMG/M
3300017940\|Ga0187853_10126034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300017946\|Ga0187879_10040149	All Organisms → cellular organisms → Bacteria	2791	Open in IMG/M
3300018023\|Ga0187889_10389876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	604	Open in IMG/M
3300018030\|Ga0187869_10133306	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1239	Open in IMG/M
3300018033\|Ga0187867_10207786	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300018033\|Ga0187867_10487209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	679	Open in IMG/M
3300018033\|Ga0187867_10766466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	525	Open in IMG/M
3300018038\|Ga0187855_10717013	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300018047\|Ga0187859_10403824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300018057\|Ga0187858_10533322	Not Available	714	Open in IMG/M
3300019786\|Ga0182025_1340027	Not Available	1790	Open in IMG/M
3300021178\|Ga0210408_10341492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300021432\|Ga0210384_10769238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300021479\|Ga0210410_10449921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1152	Open in IMG/M
3300025581\|Ga0208355_1088694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	672	Open in IMG/M
3300025588\|Ga0208586_1009312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2538	Open in IMG/M
3300025619\|Ga0207926_1080243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	828	Open in IMG/M
3300025664\|Ga0208849_1019438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2275	Open in IMG/M
3300025664\|Ga0208849_1101652	Not Available	794	Open in IMG/M
3300025679\|Ga0207933_1073953	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300025725\|Ga0209638_1080086	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1212	Open in IMG/M
3300025864\|Ga0209429_10392066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300026273\|Ga0209881_1074142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300027652\|Ga0209007_1039435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1206	Open in IMG/M
3300027652\|Ga0209007_1065795	Not Available	917	Open in IMG/M
3300027662\|Ga0208565_1088823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	940	Open in IMG/M
3300027853\|Ga0209274_10667145	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027867\|Ga0209167_10304222	Not Available	862	Open in IMG/M
3300027895\|Ga0209624_10873262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	588	Open in IMG/M
3300027905\|Ga0209415_10004679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24980	Open in IMG/M
3300027905\|Ga0209415_10005454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22850	Open in IMG/M
3300027908\|Ga0209006_11046871	Not Available	647	Open in IMG/M
3300028877\|Ga0302235_10443017	Not Available	554	Open in IMG/M
3300029901\|Ga0247051_1136749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	580	Open in IMG/M
3300029902\|Ga0247058_1051686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	731	Open in IMG/M
3300029999\|Ga0311339_11628060	Not Available	569	Open in IMG/M
3300030503\|Ga0311370_12269055	Not Available	531	Open in IMG/M
3300030707\|Ga0310038_10260926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	797	Open in IMG/M
3300031090\|Ga0265760_10260057	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
3300031234\|Ga0302325_10897149	Not Available	1231	Open in IMG/M
3300031234\|Ga0302325_12762495	Not Available	577	Open in IMG/M
3300031236\|Ga0302324_100706485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1422	Open in IMG/M
3300031236\|Ga0302324_102695841	Not Available	601	Open in IMG/M
3300031251\|Ga0265327_10484836	Not Available	533	Open in IMG/M
3300031525\|Ga0302326_11362686	Not Available	961	Open in IMG/M
3300031525\|Ga0302326_12018497	Not Available	744	Open in IMG/M
3300031525\|Ga0302326_13251434	Not Available	547	Open in IMG/M
3300031670\|Ga0307374_10001810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39079	Open in IMG/M
3300031670\|Ga0307374_10002320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34010	Open in IMG/M
3300031670\|Ga0307374_10010505	All Organisms → cellular organisms → Bacteria	13399	Open in IMG/M
3300031670\|Ga0307374_10050180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4333	Open in IMG/M
3300031670\|Ga0307374_10249187	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300031671\|Ga0307372_10010406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12599	Open in IMG/M
3300031672\|Ga0307373_10241848	Not Available	1224	Open in IMG/M
3300031708\|Ga0310686_113112599	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031962\|Ga0307479_10904683	Not Available	855	Open in IMG/M
3300033887\|Ga0334790_024326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2642	Open in IMG/M
3300033887\|Ga0334790_171898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300033888\|Ga0334792_183498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300034091\|Ga0326724_0185622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1250	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.20%
Host-Associated	Host-Associated	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.60%
Aquatic	Environmental → Aquatic	17.60%
Plants	Host-Associated → Plants	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.40%
Freshwater	Environmental → Aquatic → Freshwater	16.00%
Peat	Environmental → Terrestrial → Peat	11.20%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.20%
Loam	Environmental → Terrestrial → Soil → Loam	7.20%
Clay	Environmental → Terrestrial → Soil → Clay	5.60%
Ice	Environmental → Aquatic → Freshwater → Ice	1.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.20%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	5.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.60%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	18.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.00%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.00%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	8.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	7.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	5.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.40%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.60%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.80%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	0.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.80%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.80%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001408	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005861	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly)	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015198	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2A, Ice surface)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029901	Cryconite microbial communities from ice sheet in Kangerlussuaq, Greenland - KAN_P-B3a	Environmental	Open in IMG/M
3300029902	Cryconite microbial communities from ice sheet in Thule, Greenland - THU-2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_12035470	2170459009	Grass Soil	ILMVIGAVGLAISTLVFSSSRRPAGSGHHTYDREVTDSHGQSSAVHEEVH
JGI12269J14319_1000033524	3300001356	Peatlands Soil	MGLTGMVFSIVSIAAGAVLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH*
JGI12269J14319_100181552	3300001356	Peatlands Soil	VGRTGMVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTAGRTAEVHEEVRT*
JGI20206J14855_10065041	3300001408	Arctic Peat Soil	GFRLSTVGVILMVVGAIGLAVSAAIFGTSRRPAGGRGHTYDREVTDSQGGVAAVHEEVH*
A20PFW1_11430951	3300001532	Permafrost	LDDPAFSAVAVAAGAIKYWAVTYQGHGFRFSTVGVILMVVGGVGFVVSTIVFEVSRRPVGGRRHAYDRESVDAQGRSTEVHEKTK*
Ga0062385_109394322	3300004080	Bog Forest Soil	HGFRLSTVGVILMVVGVVGLIISTVIFAMARRPVGTQNRTYDRAVTDPQGRTAAVHEEVHN*
Ga0062384_1013101531	3300004082	Bog Forest Soil	AVMYWAVTSSGHGFRISTVGVILMVVGGVGLVSSAIIFATSRRAPGSRHRTYDREVTDSQGGSTAVHEEVH*
Ga0058900_13517441	3300004099	Forest Soil	MEVTEMGLTGMVFSLISIAAGAVMYWAVTSQGHGFRLSTVGVILIVVGAVGLVISTVIFAMSRRPAGAQNRTYDRAVTDTEGRTAAVHEEVHS*
Ga0070735_101036003	3300005534	Surface Soil	MEVTEMGLTGMVFSAISIAVGAVMYWAITTTQGHGFRLSTVGIILMVVGAAGFVVSGTIFASSRRPDSAGHRTMDRSVTDAQGRTAEVHEEVRSS*
Ga0070735_102970133	3300005534	Surface Soil	TQGHGFRLSTVGVILMVVGAVGFVASSIIYASSRRSVGTGHRTMDCAVTDTQGRTAEVHEEVRTS*
Ga0070730_106874761	3300005537	Surface Soil	QGHGFRISTVGVILMVVGGIGLILSSIVFAVSRRPAGGRNRTYDRQVIDPSGRTAEVHEEVH*
Ga0070733_103449303	3300005541	Surface Soil	MGLTGMVFSAISIAAGAVLYWAITTTQGHGFRLSTVGVILMVVGAVGFVVSSIIYASSRRPVGAGHRTMDRAVTDTEGRTAEVHEEVRSS*
Ga0070732_100562923	3300005542	Surface Soil	WAVTSQGHGFRLSTVGVILMVVGAVGLVISTVIFAMARRPAGTQNRTFDREVTDPQGRTAVVHEEVHS*
Ga0080006_114062626	3300005861	Hypersaline Mat	MYWAVTYPGHGFRFSTVGVILMVVGAIGLLISTIVYATSRRPAGGRRHAYDRQTIDAAGRSTEVHESVK*
Ga0097691_100033550	3300006055	Arctic Peat Soil	MGLPGMFFSTVAIAAGAVMYWAITTTQGHGFRLSTVGVILMVVGAIGLVASSIVFAMSRRSTTNRPHTYDRAATDSLGRSTEVHEEVH*
Ga0073928_107396963	3300006893	Iron-Sulfur Acid Spring	RYSTIGVILMIVGAVGFLASAAIYATSRRPAGSRHRSYDREVTDAQGHTASVHEEVH*
Ga0116222_11668291	3300009521	Peatlands Soil	VMYWAVTAQGHGFRLSTVGVILMAVGAVGLVVSTVIFATSRRPSGSRHHTYDREVTDSQGGSTAVHEEVH*
Ga0116221_12414542	3300009523	Peatlands Soil	MEAQKMGLTGMVFSIVSIAAGAVLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREV
Ga0116221_12701951	3300009523	Peatlands Soil	MVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTA
Ga0116225_12681571	3300009524	Peatlands Soil	AGAIMYWAVTTTQTHGFRLSTVGVILMVVGAVGLVISTVIFAMSRRPAASRNRTYDKQVTDTAGRTAEVHEEVRQ*
Ga0116225_15309951	3300009524	Peatlands Soil	ISTVGVILMIVGAIGLAVSGTIFGSSRRTTGGRSRTYDREVTDAQGRTAAVHEEVHT*
Ga0116220_101066731	3300009525	Peatlands Soil	MEAQKMGLTGMVFSIVSIAAGAVLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH
Ga0116114_10491712	3300009630	Peatland	MAVSQATTWKWKKMGRTGMVFSTIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH*
Ga0116110_11437721	3300009643	Peatland	STIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGFGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH*
Ga0116215_13753811	3300009672	Peatlands Soil	LYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH*
Ga0116215_14175381	3300009672	Peatlands Soil	GMVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTAGRTAEVHEEVRT*
Ga0116224_102485211	3300009683	Peatlands Soil	MVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTAGR
Ga0116224_106064582	3300009683	Peatlands Soil	GVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH*
Ga0116216_100534452	3300009698	Peatlands Soil	MEAQKMGLTGMVFSIVSIAAGAVLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH*
Ga0116217_105928982	3300009700	Peatlands Soil	VLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH*
Ga0116219_103790331	3300009824	Peatlands Soil	MVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRKRTYDKQVTDTAG
Ga0074045_105786882	3300010341	Bog Forest Soil	AGAVMYWAVTSQGHGFRLSTVGVILMVVGVVGLVASGLVFATSRRPGSGKHTYDREAIDAQGHSTEVHEEVHS*
Ga0136449_1000014669	3300010379	Peatlands Soil	MVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTAGRTAEVHEEVRT*
Ga0136449_1001937633	3300010379	Peatlands Soil	MIVGTVGLVASTIVFAMSCRSTGSRHHTYDRQVTDAQGRSAVVHEEVH*
Ga0136449_1017689852	3300010379	Peatlands Soil	MAFSFIAVAAGAVMYWAVTSQGHGFRLSTVGVIFMVVGAVGLVISTVIFATSRKPAGSQDRTFDRQVTDPQGRTAAVHEEIHT*
Ga0136449_1029764772	3300010379	Peatlands Soil	MYWAVDTTQTHGFRLSTVGVILMVVGAVGFIASSIVFATSRRSTVARNRTFDRQATDAQGRSTVVHEQVS*
Ga0150983_147062321	3300011120	Forest Soil	TVGVILMIVGAIGFVASATVFATSRHPAGDRGRTFDRQVTDAQGRTAAVHEEVY*
Ga0150983_147062324	3300011120	Forest Soil	VEVILMTVGGVGLVRSAIGFGVSSRRPAVSRRHTYDHEATVAQGASTKVHDEVQS*
Ga0150983_165779392	3300011120	Forest Soil	WAVTSQGHGFRLSTVGVILMVVGGVGLVASAIVFAVSRRPAGGGHRTYDKQVTDTQGRTAEVHEEVKSGL*
Ga0181518_105037441	3300014156	Bog	GHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH*
Ga0181532_100098866	3300014164	Bog	MFFSVVSMSGGSAMYWGLTATLGHGFRLSTVGVILMVLGAVGLVASSIVFAVSRRSTGGASGHRTYDRQATDSQGRSTAVHEEVHYRPYSP*
Ga0181523_100084096	3300014165	Bog	MFFSVVSMSGGSAMYWGLTATLGHGFRLSTVGVILMVLGAVGLVASSIVFAVSRRSTGGASGHRTYDRQATDSQGRSTAVHEEVH*
Ga0181531_106522491	3300014169	Bog	MGLTGMVFGTIAAGAGAVMYWGVTTTQTHGLRLSTVGVILMVVGAVGLARSATIFATSRRAAGGRHHSYDREVTDAQGRTAAVLEEVH*
Ga0182018_100050089	3300014489	Palsa	MIVGAIGLVISTIVFGTSRRSTGSRRHTYDRQVTDAQGRSAAVHEEVH*
Ga0182018_101381552	3300014489	Palsa	MAFSTIAIAAGAVMYWAVTAQGHGFRFSTVGVILMIVGAVGFVASAVVFAVSRRQTSSRRTYDREVTDSHGRSAAVHEEVR*
Ga0182018_105336551	3300014489	Palsa	ARTEAHEMGMGRTGMFFSILAIAAGAIMYRAVTSQGHGFRLSTVGGILMVVGAVGLVASGIVFATSRRPGSGTHTYDREAVDTQGHSTEVHEEVHN*
Ga0182014_102766223	3300014491	Bog	MEEQFMGLTGMGFSTVAIAAGAIMYWAVTYPGHAFRFSTVVVILMVVGAVGLVISTIVFAMSRRPVGGRRHAYDKQTIDAEGRSTEVHEAVE*
Ga0182017_108781011	3300014494	Fen	QGHGFRLSTVGVILMIVGVVGLVASGLVFATSRRPGSGKHTYDREAIDAQGHSTEVHEEVHS*
Ga0182015_1000805711	3300014495	Palsa	MTGVSLYYTKLFSTLAIAAGAIMYWAVTSQGHGFRLSTVGVIFMVAGVVGLVTSGIVFAVSRRPVGSGKHTFDRQATNSEGLSTALHEEVRS*
Ga0182015_101418431	3300014495	Palsa	MVFSTIAIAAGAVMYWAVTNTQGHGFRLSTVGVILMIVGAIGLAVSATIFGTSRRTTGRRAHTYDRQVTDSQGGVAAVHEEVH*
Ga0182015_104658321	3300014495	Palsa	TVGVILMVVGAVGLAVSATIFGTSRRTAGGRHHSYDREVTDAQGRTAAVHEEVR*
Ga0182015_105820131	3300014495	Palsa	HWAVTTQGHGFRLSTVGIILMILGAVGLVASMIVFGMSRHPSGSRHQTYDREATDAQGHSTAVHEEVR*
Ga0182015_107511131	3300014495	Palsa	WAVTAQGHGFRFSTVGVILMIVGAVGLVTSTIVFGMSRRSTGRRHQTYDRQVIDAQGRSAVVHEEVH*
Ga0182015_107805661	3300014495	Palsa	MGLTGMVFSTISIAAGAVMYWAVTTTQNHGFRLSTVGVILMVVGAVGLAVSATIFGTSRRTAGGRHHSYDREVT
Ga0182015_108562891	3300014495	Palsa	TVGVILMVVGAVGLAVSATIFGTSRRTAGGRHHSYDREVTDAQGRTAAVHEEVH*
Ga0182024_100324746	3300014501	Permafrost	MVLSAIAFAAGAIMYWAVTAQGHGFRLSTVGVILMVVGAVGFVASAIIFGVSRRPVAAGHHTLDRQVVDTQGRTSEVHQDVK*
Ga0182024_102696355	3300014501	Permafrost	MVFSTISIAAGAVMYWAVTTPGHGFRLSTVGVILIVVGAIGLVTSTIVFAMSRRPVGGRHRTYDRQATDAQGVSTSLHEEAR*
Ga0182024_106462662	3300014501	Permafrost	MEAHEMGLTGMVFSTIAIAAGAVMYWAITTTQTHGFRLSTVGVILMIAGAVGLVVSTTIFGTSRRGTGRRSHTYDREVVDAQGRTAAVHEEVH*
Ga0182024_106584383	3300014501	Permafrost	MVLSAFSFVAGAIMYWAVTAQGHGFRLSTVGVILMVVGVVGFVASAVIFGVSRHPVAAGHHTLDRQVVDSQGRSSEVHQDVK*
Ga0182024_111753201	3300014501	Permafrost	QGHGFRLSTVGVILMIVGAIGLAVSATIFGTSRRTTGRRGHTYDRQVTDSQGGVAAVHEEVH*
Ga0182024_113036472	3300014501	Permafrost	MVFSAIAIAVGAILYWAVTTQGTGFRVSTVGVILMIVGGAGFVASAIVFGMSLSPAGSRHHSYDRQVVDPQGHSTEVHEEVR*
Ga0182024_115041441	3300014501	Permafrost	MVLSAIAFAAGAIMYWAVTAQGHGFRLSTVGVILMVVGAVGFVASGVIFGVSRRPVAGAHHTLDRQVVDSQGRSSEVHQDVK*
Ga0182024_119052402	3300014501	Permafrost	GVILMVVGAVGLVVSSVVFAMSRRPTGGRHHTYDREVIDAQGRTAAVHEEVR*
Ga0182030_104205931	3300014838	Bog	TVGVILMIVGAVGLIVSTAIFGTSRRAAGGRHHSYDREVTDAQGRTAAVHEEVH*
Ga0167625_10408672	3300015198	Glacier Forefield Soil	MEAREMGLTGMGFNSVAIAAGAIMYWALTFQGHGFRFSTVGVIFMVVGAIGLVISTIVFAMSRRPAGGRQHAYDKQTIDTEGRSTEVHEAVK*
Ga0187853_101260341	3300017940	Peatland	MGRTGMVFSTIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH
Ga0187879_100401494	3300017946	Peatland	WAVTTTQGHGFRISTVGVILMVVGAVGLVISTVIFATSRRQSGSRNRTYDKQVTDTAGRTAEVHEEVHQ
Ga0187889_103898761	3300018023	Peatland	AAGAVMYWAVTSQGHGFRLSTVGVILMVVGAVGLVASGTVFATSRRPGSGKHTYDREEIDAQGHSTEVHEEVHS
Ga0187869_101333063	3300018030	Peatland	SQTSKLDCRRSDMAVSQATTWKWKKMGRTGMVFSTIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH
Ga0187867_102077861	3300018033	Peatland	TTTQGHGFRISTVGVILMVVGAVGLVISTVIFATSRRQSGSRNRTYDKQVTDTAGRTAEVHEEVHQ
Ga0187867_104872091	3300018033	Peatland	AVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH
Ga0187867_107664661	3300018033	Peatland	MGRTGMVFSTIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVTSATIFGMSRRPAVSRDRTYNRETIDEQGRSTAVHEYVH
Ga0187855_107170132	3300018038	Peatland	MGLTGMFFSSIAIAVGAVMYWAVKSQSTGFRVSTVGVILMAVGALGFIASSVIFGTSRRATGGRHHTYDREA
Ga0187859_104038242	3300018047	Peatland	MGRTGLFFSTLAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVTSATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH
Ga0187858_105333221	3300018057	Peatland	SQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH
Ga0182025_13400274	3300019786	Permafrost	TVGIILMIVGAIGLVISTIVFGTSRRSTGSRRHTYDRQVTDAQGRSAAVHEEVH
Ga0210408_103414922	3300021178	Soil	MEVTEMGLTGMVFSLISIAAGAVMYWAVSSQGHGFRLSTVGVILIVVGAVGLVISTVIFAMSRRPAGAQNRTYDRAVTDTEGRTAAVHEEVHS
Ga0210384_107692382	3300021432	Soil	MEVTEMGLTGMVFSLISIAAGAVMYWAVTSQGHGFRLSTVGVILIVVGAVGLVISTVIFAMSRRPAGAQNRTYDRAVTDTEGRTAAVHEEVHS
Ga0210410_104499211	3300021479	Soil	MGLAGMVFSMIAIGAGAVMYWAVTSQGHGFRLSTVGVILIVVGAVGLVISTVIFAISRQPAGGRNRTYDKQVTDPQGRTAAVHEEIH
Ga0208355_10886941	3300025581	Arctic Peat Soil	MGLPGMFFSTVAIAAGAVMYWAITTTQGHGFRLSTVGVILMVVGAIGLVASSIVFAMSRRSTTNRPHTYDRAATDSLGRSTEVHEEVH
Ga0208586_10093123	3300025588	Arctic Peat Soil	MGLVGMFFSTVAIAAGAVMYWAITTTQGHGFRLSTVGVILMVVGAIGLVASAIVFGMSRSSAGSRHHTYDREATDSLGRSTEMHEEVH
Ga0207926_10802431	3300025619	Arctic Peat Soil	SVAIAAGAIMYWAVTYPGHGFRFSTVGVILMVVGAIGLVISTIVFAVSRRPAGGTRHAYDKQTIDAEGRSTEVHEVVK
Ga0208849_10194381	3300025664	Arctic Peat Soil	WAVTYQGHGFRFSTVGVILMVVGAIGLVISTIVYATSRRPAGGRRHAYDKQTIDAAGRSTEVHEAVK
Ga0208849_11016521	3300025664	Arctic Peat Soil	AGAVMYWAVTTQGHGFRLSTVGVILMVVGAVGLVASTIVFGMSRRPTGSRNRTYDKQVTDPQGRTAEVHEELH
Ga0207933_10739531	3300025679	Arctic Peat Soil	AVMYWAITTTQGHGFRLSTVGVILMVVGAIGLVASAIVFAMSRSSAGSRHHTYDREATDSLGRSTEVHEEVH
Ga0209638_10800861	3300025725	Arctic Peat Soil	DHVLGSDRQGHGFRFSTMRMTPMVVGAIGLVISTIVFATSRRPTSGRRHAYDKQTIDAEGRSTEVHEEVR
Ga0209429_103920661	3300025864	Arctic Peat Soil	QGHGFRFSTVGVILMVVGGVGFVVSTIVFEVSRRPVGGRRHAYDRESVDAQGRSTEVHEKTK
Ga0209881_10741421	3300026273	Soil	YWAVTYQSHGFRFSTVGVILMVVGGVGFVVSTIVFEVSRRPVGGRRHAYDRESVDAQGRSTEVHEKTK
Ga0209007_10394351	3300027652	Forest Soil	YWAVTAQGHGFRYSTVGVILMIIGAVGLVASTIVFGMSRRSAGGRNHTYDRQVIDAQGRSAAVHEEVH
Ga0209007_10657952	3300027652	Forest Soil	WAVTVQGHGFRYSTVGVILMIVGAIGLVTSSIVFAMSRRSTGGRHHTYDREIIDPQGRSAVVHEEIH
Ga0208565_10888233	3300027662	Peatlands Soil	GHGFRLSTVGMILMIVGAFGLVVSMTVFGMSRRSTGSRQHTYDREATDSQGRSTVVHEEV
Ga0209274_106671452	3300027853	Soil	TISIAAGAVMYWAVTAQGHGFRYSTVGVVLMVVGAIGLVVSTAVFATSRRPAGSRHHSYDREVIDAQGRSTEVHEEVH
Ga0209167_103042222	3300027867	Surface Soil	MGLTGMVFSAISIAAGAVLYWAITTTQGHGFRLSTVGVILMVVGAVGFVVSSIIYASSRRPVGAGHRTMDRAVTDTEGRTAEVHEEVRSS
Ga0209624_108732621	3300027895	Forest Soil	GGVMYWAVTAQGHGFRYSTIGVILMVVGVVGLVLSSVVFGISRRTPGGRRHTYDREVIDTQGRTAAVHEEVR
Ga0209415_1000467920	3300027905	Peatlands Soil	MGLTGMVFSIVSIAAGAVLYWAVTAQGHGFRPSTVGVILMVVGAVGLVASSVIFGTSRRPAGSRHHTFDREVTDAQGASSAVHEEVH
Ga0209415_1000545410	3300027905	Peatlands Soil	VGRTGMVFSTIAIAAGAIMYWALTSQGHGFRPSTVGVILMVVGAVGLVTSAVIFAVSQRPAGSRNRTYDKQVTDTAGRTAEVHEEVRT
Ga0209006_110468713	3300027908	Forest Soil	TTQGTGFRLSTVGVILMVVGGVGLVASSAVFGVSRRPVGGHAHTYEREAIDAQGRSTSVHEEIHQ
Ga0302235_104430172	3300028877	Palsa	GHGFRFSTIGVILMIVGAVGLVASTIVFTISRRSTGGRHHTYDRQVIDAQGRSAAVHEEV
Ga0247051_11367491	3300029901	Cryconite	EASECRGDEPDKQMEAREMGLTGMGFSSVAIAAGAIMYWALTFQGHGFRFSTVGVIFMVVGAIGLVISTIVYATSRRPAGGGHHTYDREATDAQGRTAEVHEEVR
Ga0247058_10516861	3300029902	Cryconite	VSLGANHAPGEASECRGDEPDKQMEAREMGLTGMGFNSVAIAAGAIMYWALTFQGHGFRFSTVGVIFMVVGAIGLVISTIVYATSRRPAGGGHHTYDREATDAQGRTAEVHEEVR
Ga0311339_116280601	3300029999	Palsa	YWAITTTQGHGFRLSTVGVILMIVGAIGLVVSTIVFAMSRNSAGSRHHTYDREATDSLGRSTAVHEEVH
Ga0311370_122690551	3300030503	Palsa	AITTTQGHGFRLSTVGVILMIVGAIGLVVSTIVFAMSRNSAGSRHHTYDREATDSLGRSTAVHEEVH
Ga0310038_102609261	3300030707	Peatlands Soil	FRLSTVGVILMVVGAVGLVISTVIFAMSRRPAASRNRTYDKQVTDTAGRTAEVHEEVRQ
Ga0265760_102600571	3300031090	Soil	TVGVILMVIGVVGLVASAIVFGMSRRSTGGRNHTYDRQVIDAQGRSAAVHEEVH
Ga0302325_108971491	3300031234	Palsa	AQGHGFRLSTVGVILMIVGAVGLVVSSIIFGTSRRPSGSRHHTYDREVTDAQGGSTAVHEEVH
Ga0302325_127624952	3300031234	Palsa	MGLTGMVFSTIAVAAGAVMYWAVTTTQTHGLRLSTVGVILMVVGAVGLAVSTAIFATSRRAAGGRHHSYDREVTDAQGRTAAVHEEVH
Ga0302324_1007064853	3300031236	Palsa	GTGFRVSTVGVILMIVGGVGLVTSLVVFSVSRRPAGSHGHTYDREAIDRQGNSTSVHEEVHQ
Ga0302324_1026958412	3300031236	Palsa	GAIMYWAVTAQGHGFRFSTVGVILMIVGAVGLVASTIVFAMSRRSTGGRHHTYDRQVIDAQGRSAAVHEEVR
Ga0265327_104848362	3300031251	Rhizosphere	GFRVSTVGVILMIAGAVGLVVSAIVFGVSSRSTGSGSRTYDREATDAQGASSSVHEEVH
Ga0302326_113626863	3300031525	Palsa	GFRLSTVGVILMIVGAIGLAISAAIFGTSRRPAGGRGHTYDREVTDSQGGFAAVHEEVH
Ga0302326_120184972	3300031525	Palsa	HGFRLSTVGVILMIVGAIGLVVSTIVFAMSRNSAGSRHHTYDREATDSLGRSTAVHEEVH
Ga0302326_132514342	3300031525	Palsa	MGLTGMVFSTIAVAAGAVMYWAVTTTQTHGLRLSTVGVILMVFGAVGLAVSTAIFATSRRAAGGRHHSYDREVTDAQGRTAAVHEEVH
Ga0307374_1000181043	3300031670	Soil	MGLTGMALSTISIATGAVMYWAVTAQGHGFRYSTVGVILMVVGAIGFAASAVIFSTSRRPAGSRHHSYDREVTDAQGRSTAVHEEVH
Ga0307374_1000232024	3300031670	Soil	MGLTGMVFSIIAMAAGAVMYWAVTAQGHGFRLSTVGVILMVLGAVGLVASAIVYGTSRRPAGSRDRTYDRQATDSQGVATTVHEEVH
Ga0307374_1001050511	3300031670	Soil	MGRAGMAFSAIAIGAGAVMYWAVTSQGTGFRLSTVGVILMVVGGVGFVASAIIFGVSRRPVGGRDHTFDRQATDTQGGSTTVHEEVHH
Ga0307374_100501804	3300031670	Soil	MRLDPASFETWQFASALRMEVTDMGLTGMVFSAISIAAGAVMYWAITTTNGHGFRLSTVGVILMVVGAVGFVVSGIVYATSRRPASAGNRSMDRAVTDSQGRTAEVHEEVRSS
Ga0307374_102491871	3300031670	Soil	AVTYPGHGFRFSTVGVILMVVGAIGLVISTIVFAMSRRPPGGRRHAYDKQTIDAEGRSTEVHEAVK
Ga0307372_100104066	3300031671	Soil	MGLPGMFFSTVAIAAGAVMYWAITTTNGHGFRLSTVGVILMIVGGIGLVVSSIVYAMSRQSTASRNHTYDSQATDSQGRTTEVHQQTR
Ga0307373_102418482	3300031672	Soil	MGLTGMAFSAISIAVGAIMYWAITTTQGHGFRLSTVGVILMVVGAVGFVVSSVVFAASRRPATAGHRTIDRAVTDAQGRTAEVHEEVRAS
Ga0310686_1131125992	3300031708	Soil	STVGVILMIVGAIGLALSATIFAVSRRTTGRRGHTYDREVIDSQGVVAAVHEEVH
Ga0307479_109046832	3300031962	Hardwood Forest Soil	AVTSQGHGIRLSTVGVILMVIGAVGLAISTVIFALDRRPRGTQSRIYDRAVTDTLGRTAAVHEEVHS
Ga0334790_024326_1652_1903	3300033887	Soil	MFFSTVAIAAGAVMYWAITTTQGHGFRLSTVGVILMIVGAIGLVASSIVFATSRRSTGSRHHTYDREATDSLGRSTEVHEEVH
Ga0334790_171898_151_402	3300033887	Soil	MFLSTLAIAAGAIMYWAVTSQGHGFRLSTVGVIFMVAGVVGLVTSGIVFAVSRRPVGSGKHTFDRQATNSEGLSTALHEEVRS
Ga0334792_183498_271_498	3300033888	Soil	MAAGAAMYWAVTAQGHGFRFSTVGVILMIVGAVGLVTSTIVFAISRRSTGGRHHTYDRQVTDAQGRSAAVHEEVH
Ga0326724_0185622_112_360	3300034091	Peat Soil	MVFSTIAIAAGAVMYWAVTSQGHGFRLSTVGVILMVVGGVGLVASATIFGMSRRPAVSRDRTYDRETTDAQGRSTAVHEYVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences