Metagenome / Metatranscriptome Family F068772

Basic Information
Family ID	F068772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	134 residues
Representative Sequence	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFDGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGT
Number of Associated Samples	96
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (35.484 % of family members)
Environment Ontology (ENVO)	Unclassified (54.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.129 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.94% β-sheet: 57.35% Coil/Unstructured: 39.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00534	Glycos_transf_1	6.45
PF14279	HNH_5	6.45
PF01844	HNH	4.03
PF06945	DUF1289	2.42
PF03851	UvdE	1.61
PF04542	Sigma70_r2	1.61
PF02562	PhoH	0.81
PF00313	CSD	0.81
PF00004	AAA	0.81
PF02732	ERCC4	0.81
PF14572	Pribosyl_synth	0.81
PF13412	HTH_24	0.81
PF02518	HATPase_c	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	2.42
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.61
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.61
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.61
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	1.61
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.61
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.81
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.81
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.81

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.77%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.23%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	37.90%
Coastal	Environmental → Aquatic → Marine → Coastal	36.29%
Pelagic	Environmental → Aquatic → Marine → Pelagic	8.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.45%
Strait	Environmental → Aquatic → Marine → Strait	3.23%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.23%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.42%
Inlet	Environmental → Aquatic → Marine → Inlet	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	36.29%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	35.48%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.61%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	35.48%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	33.87%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	8.06%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.65%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.23%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.42%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.42%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.61%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.81%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.81%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.81%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.81%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.81%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.81%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001952	Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019276	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019280	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022159	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025685	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025822	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414 (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2224_10523793	3300001952	Marine	MNKFILSLLSIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRITLS*
Ga0075466_10956981	3300006029	Aqueous	MNKFILSLLSIVVSANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGIGKSINLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQKG
Ga0075461_102211351	3300006637	Aqueous	MQHMNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQR
Ga0070749_101861741	3300006802	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAV
Ga0070749_101899331	3300006802	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLALENKYITPYVIGTYDLDIAGA
Ga0070749_102010763	3300006802	Aqueous	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGIGKSLNIFDGFSLRGDAQI
Ga0070749_102950881	3300006802	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIIGLKKSFDIDGFFTITPSVE
Ga0070749_106919691	3300006802	Aqueous	MNKLILSLLSIIVSVNIIAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFDGFSLRGDAQIFQHQVAQGASSTEGRFSLSLDNKYVTPYVVGTYDLDIAGAGY
Ga0070749_107525711	3300006802	Aqueous	MKKFILSLLTIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGIDTYVGAVTLNAGQGL
Ga0075476_100270091	3300006867	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFDGFSLRGDAQV
Ga0075477_101604832	3300006869	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEG
Ga0070750_100320621	3300006916	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIIGLKKSFDIDGFFT
Ga0070746_105244592	3300006919	Aqueous	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYYGVNTYVGATILDAGTGLDELHANV
Ga0070748_10889191	3300006920	Aqueous	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVIGTYDLDVANRGYSQRGYIVGLKRQFDVFSLFTLTPS
Ga0075468_1000394214	3300007229	Aqueous	MAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGIGKSINLFETFSLKADAQIFQHQ
Ga0070745_100334220	3300007344	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGR
Ga0070752_10893033	3300007345	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEG
Ga0070752_13928431	3300007345	Aqueous	NIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGVGKSLNIFDGFSLRGDAQIFQHQVAQGASSTEGRFSLSLDNKYVTPYVVGTYDLDIAGAGYLQKGYIVGIKKSFDIDGFFTITPSIEYGKMTDYDVLGAK
Ga0099851_11258341	3300007538	Aqueous	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGIGKSLNLFDGFSLRGDAQIFQHQVAQGASSTEGRLSLSLD
Ga0099846_10811501	3300007542	Aqueous	MQHMKKFILSLLTIVVSANVMAEGESNIKASVNAGYTSNYIVNGLAKTGSQTFVGVDIGTQYYGIDTYVGAVTLNAGEALGELHGNMGIGKAIEVFDGFSLRGDAQVFQHQVVQGASSTEARLSLSLDNEYITPYVIGTYDLDISGTGYLQKGYIVGVKKSFDIDG
Ga0102954_11610071	3300007778	Water	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGIGKSLNIFDGFSLRGDAQIFQHQVAQGASSTEGRLSLSLDNKYVTPYVVGTYDLDIAGAGYLQKGYIVGIKKSFDIDGFFTITPSIEYGKMTDYDVLGAK
Ga0075480_105357411	3300008012	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIF
Ga0102957_14053521	3300009027	Pond Water	MADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVSAGANSTEGRLTLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVGLKK
Ga0115552_14226191	3300009077	Pelagic Marine	MNKLVLSLLSVIASVSIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKVDAQIFQHQVAVGANSTEGRLTLSLDNKYIT
Ga0115547_11210921	3300009426	Pelagic Marine	MNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGKAINLFESFSLRGDAQIFQHQVAAGANSTEGRLTLALNNKYITPYVVGTYDLDVANTGYSQKGY
Ga0115545_12612242	3300009433	Pelagic Marine	MKHMKKFILSLLSIIVSASIVADEESQLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIGLFESFSLRGDAQIFQHQVAAGANSTEGRLTLSLDNE
Ga0115556_11157672	3300009437	Pelagic Marine	MNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGKAINLFESFSLRGDAQIFQHQVAAGANSTEGRLTLALNNKYITPYVVGTYDLDVANTGYSQKGYIV
Ga0115553_12349191	3300009445	Pelagic Marine	MNKLVLSLLSVIASVSIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKVDAQIFQHQVAVGANSTEGRLTLSLDNKYITPYVVGTYDLDVANRGYSQRGYIVGLKRQFDVFSLFTLTPSVEYGQ
Ga0115558_14356891	3300009449	Pelagic Marine	MNKLVLSLLSVIASVSIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKVDAQIFQHQVAVGANSTEGRLTLSLDNKYITPY
Ga0115554_100169316	3300009472	Pelagic Marine	MNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGKAINLFESFSLRGDAQIFQHQVAAGANSTEGRLTL
Ga0129345_11876201	3300010297	Freshwater To Marine Saline Gradient	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQVAQGASSTEGR
Ga0129342_10054231	3300010299	Freshwater To Marine Saline Gradient	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDAYVGAVTLNAGQGLGE
Ga0129351_10874761	3300010300	Freshwater To Marine Saline Gradient	MQHMNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGIGKSLNIFDGFSLRGDAQIFQHQVAQGASSTE
Ga0182082_10122592	3300016771	Salt Marsh	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLDELHGNVGIGKSLNIFDGFSLRGDAQIFQHQVAQGASSTEGRLSLSLDNKYVTPYVVGTYDLDIAGAGYLQKGYIV
Ga0181396_10588531	3300017729	Seawater	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQKGYIVGLRRQFDVFSLFTLTPSVEYGQMT
Ga0181396_10985451	3300017729	Seawater	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHA
Ga0181405_10500711	3300017750	Seawater	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDEF
Ga0181430_11748411	3300017772	Seawater	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQRGYIVGLKRQFDVFSLFT
Ga0181565_110514891	3300017818	Salt Marsh	MNKFIISLLSIVVSANIMAEGEIKSELKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYITPYVIGTYDLDVA
Ga0181552_104666581	3300017824	Salt Marsh	MNKFILSLISIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRLTLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVG
Ga0181584_107611691	3300017949	Salt Marsh	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLSLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGIKRSFDIDGFFT
Ga0181580_107424392	3300017956	Salt Marsh	MKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGFGELHGNVGVGKAIDLFDGFSLRGDAQVFQHQVAQGANSTE
Ga0181571_108949562	3300017957	Salt Marsh	MKKFILSLLSIVVSANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVG
Ga0181589_100340411	3300017964	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRG
Ga0181589_108337951	3300017964	Salt Marsh	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLSLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGIKRSFDIDGFFTITPSI
Ga0181587_103463671	3300017968	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFDGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGT
Ga0181587_109258511	3300017968	Salt Marsh	MKKFILSLLSIVVSANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGE
Ga0181585_102802433	3300017969	Salt Marsh	MKKFILSLLSIVISANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGVKRSFDIDGFFTITPSIEYGK
Ga0181585_103106012	3300017969	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELQSNVGIGKALNILDGFSLRGDAQVFQHQVAVGASSTEGRLTLALD
Ga0181585_107940051	3300017969	Salt Marsh	MQHMKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGFGELHGNVGVGKAIDLFDGFSLR
Ga0181576_101123824	3300017985	Salt Marsh	MNIFIILLLSIVVSANIMAEGEIKSELKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYITPYVIGTYDLDVANRGFRQEGYILGLRKTFNVYDLFNLTPSVEYGQMTDYD
Ga0181576_109474351	3300017985	Salt Marsh	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGVKK
Ga0181569_108958872	3300017986	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRADAQVFQHQVAQGASSTEGRLSLSLDNKYVTPYVIG
Ga0181572_100453331	3300018049	Salt Marsh	MKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQSFIGVDVGTQYFGIDTYVGAVTLNAGEGLGELHGNVGIGKAIDLFDGFSLRGDAQVFQHQVVKGANSTEGRITLSLDNKYITPYVIGTYDLNVADQGFSQRGYI
Ga0181572_107257691	3300018049	Salt Marsh	MNKFIISLLSIVVSANIMAEGEIKSELKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYITPYVIGTYDLDVANRGFRQEGYILGLRKTFNVYDLFNLTPSVEYGQMTDYDTVSAK
Ga0181553_107536771	3300018416	Salt Marsh	MQHMKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGFGELHGNVGVGKAIDLFDGFSLRGDAQVFQHQVAQGANSTEGRITLSLDNKYITPYVIGTYDLNVADQGFSQRGYIVGLKKSFDIDGLF
Ga0181592_105302352	3300018421	Salt Marsh	MKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGFGELHGNVGVGKAIDLFDGFSLRGDAQVFQHQVAQGANSTEGRITLSL
Ga0181592_109968931	3300018421	Salt Marsh	SIVVSANIAAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLSLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGIKKSFDIDGFFTITPSIEYGKMTDYDVLGAKLDV
Ga0181593_104777581	3300018423	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFS
Ga0181591_100937865	3300018424	Salt Marsh	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIATQYYGVDTYVGAVTLNAGQGLGELHGNVGIGKAVDVFDGFSLRGDAQVFQHQVAQGASSTEGRLSLSLNNKYVTP
Ga0181566_105585562	3300018426	Salt Marsh	MKKFILSLLSIVVSANIMAEGESNLKASVNAGYTSNYIVNGLAKTGSQSFVGVDVGTKYYGIDTYVGAVTLNAGEGFGELHGNVGVGKALDLFEGFSLRGDAQVFQHQVAQGANSTEGRITLSLDNKYVTPYVIGTYDLDVADRGFAQRGYIVGLKKQFDIDGFFTLTPSVEYGKLTDYDTI
Ga0181568_104436961	3300018428	Salt Marsh	MKKFILSLLSIVISANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKA
Ga0181568_110641432	3300018428	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIG
Ga0182069_10443032	3300019267	Salt Marsh	LLSNVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFDGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIVGLKKSFDIDGFFHYHTIC
Ga0182067_12565881	3300019276	Salt Marsh	GESNLKASVNAGYTSNYIVNGLAKTGSQSFVGVDVGTKYYGIDTYVGAVTLNAGEGFGELHGNVGVGKALDLFEGFSLRGDAQVFQHQVAQGANSTEGRITLSLDNKYVTPYVIGTYDLDVADRGFAQRGYIVGLKKQFDIDGFFTLTPSV
Ga0182068_10079421	3300019280	Salt Marsh	VVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLSLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGIKRSFDIDGFFTITPSIEYGKMTDYDVL
Ga0181574_101856251	3300020056	Salt Marsh	MQHMKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQSFIGVDVGTQYFGIDTYVGAVTLNAGEGLGELHGNVGIGKAIDLFDGFSL
Ga0222717_1000296723	3300021957	Estuarine Water	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQRGYIVGLKRQFDVFSLFTLTPSV
Ga0222717_103214922	3300021957	Estuarine Water	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGVGKSINLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYIT
Ga0222718_100021701	3300021958	Estuarine Water	MNKFILSLLSIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRITLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVGLKKS
Ga0222718_1000416812	3300021958	Estuarine Water	MNKFILSLISIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVSAGANSTEGRLTLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVGLKKSFDVFGVFNLTPSVEYGQMTDYETASV
Ga0222718_104540921	3300021958	Estuarine Water	MXHMNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGK
Ga0222716_103535391	3300021959	Estuarine Water	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLALENKYITPYVIGT
Ga0222719_100049481	3300021964	Estuarine Water	MNKFILSLLSIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRITLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVGLKKSFDVFGVFNLTPSVEYGQMTDYETASV
Ga0196893_10223421	3300022159	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGE
Ga0212020_10252881	3300022167	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTE
Ga0212027_10400962	3300022168	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRG
Ga0196901_10836652	3300022200	Aqueous	MNKFILSLLSIIVSANIIAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIIGLKKSFD
Ga0255755_12966941	3300022909	Salt Marsh	MNKFILSLISIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRLTLSLNNKYITPYVVGTYDLDVAN
Ga0255780_100708004	3300022935	Salt Marsh	MNKFILSLLSIIVSANIIAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGVVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQ
Ga0255764_103375461	3300023081	Salt Marsh	MQHMNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIIGLKKSFDIDGFFTITPSVEYGKMTDYDVLS
Ga0255760_102122581	3300023115	Salt Marsh	VYDIRHMNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLDELHGNVGIGKSLNIFDGFSLRGDAQIFQHQVAQGASSTEGRLSLSLDNKYVTPYVVGTYDLDIAGAGYLQKGYIVGIKKSFDIDGFFTITPSIEYG
Ga0255751_103024241	3300023116	Salt Marsh	MIKLSKYIIVSMLLFGASVTAEEGAVKSNLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYVTPYVIGTYDLDVANRGFRQEGYILGLRKTFNVYDLFNLTPSVEYGQMTD
Ga0255751_105848851	3300023116	Salt Marsh	MQHMKKFILSLLTIIVSANIMAEEESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGFGELHGNVGVGKAIDLFDGFSLRGDAQVFQHQVAQGANSTEGRITLSL
Ga0255761_103185141	3300023170	Salt Marsh	MKKFILSLLSIVISANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGR
Ga0255761_103398012	3300023170	Salt Marsh	MIKLSKYIIVSMLLFGASVTAEEGAVKSNLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYVTPYVIGTYDLDVANRGFRQEGYILGLRKTFNVM
Ga0255766_103532131	3300023172	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLALENKYITPYVIGTYDLDIAGAGYLQKGYIVGIKRSFDIDGFFTITPSIEYGKMTDYD
Ga0255776_103353862	3300023173	Salt Marsh	MNKFILSLLSIIVSANIIAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGVVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDN
Ga0255759_101016781	3300023178	Salt Marsh	MNKFIISLLSIVVSANIMAEGEIKSELKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTVYQGFDTYVGAVVLDAGAGIDQLHANVGVGKGLIVNDTFTLRLDAQVFQHQVAQGANSTEGRLTAALENKYITPYVIGTYDL
Ga0255759_103573253	3300023178	Salt Marsh	MKKFILSLLSIVISANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIATQYYGLDTYVGAVTLNAGQGLGELHGNVGIGKAVDVFD
Ga0255768_101551803	3300023180	Salt Marsh	MQHMKKFILSLLTIVVSANVMAEGESNLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIGTQYYGIDTYVGAVTLNAGEALGELHGNMGIGKAIEVFDGFSLRGDAQVFQHQVVQGASSTEGRLSLSLDNEYITPYVIGTYDLDISGTGYLQKGYIAGVKKSFDIDGF
Ga0255768_101701971	3300023180	Salt Marsh	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFDGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRGYIVGLKKSFDIDGFFTITPSVEYGKMTDY
(restricted) Ga0233443_13255731	3300024324	Seawater	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQRGYIV
Ga0209645_11220291	3300025151	Marine	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGLGELHGNVGIGKAVDLFDGFSLRGDAQVFQHQVVQGANSTEGRITLSLDNKYITPYVVGTYD
Ga0208148_10604571	3300025508	Aqueous	MNKFILSLLSIVVSANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGIGKSINLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQKGYIVGLRRQFDVFSLFTLTPSVEYGQMTDYETA
Ga0209304_10701351	3300025577	Pelagic Marine	MNKLVLSLLSVIASVSIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGK
Ga0208004_10751433	3300025630	Aqueous	ANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLALENKYITPYVIGTYDLDIAGAGYLQKGYIRSLFASFTFYFYIIYFCPFGKGQTI
Ga0208004_11403821	3300025630	Aqueous	MKKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAVEVFDGFSLRGDAQVFQHQVAQGASSTEGRLTLSLDNKYVTPYVIGTYDLDIAGAGYLQKGYIVGIKKSFDIDGFFTITPSIE
Ga0208004_11489861	3300025630	Aqueous	MQHMNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVVGTYDLDIAGAGYAQRG
Ga0208161_11768382	3300025646	Aqueous	MNKFILSLLSVVVSANIVVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEIFDGLSLRGDAQIFQHQVAQGASSTEGRLSLS
Ga0208428_10168634	3300025653	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRLTLALDNKYITPYVV
Ga0209095_10216471	3300025685	Pelagic Marine	MNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGKAINLFESFSLRGDAQIFQHQV
Ga0208899_12280921	3300025759	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEVFDGFSLRGDAQVFQHQV
Ga0209362_12325091	3300025770	Marine	MKKFILPLLSIIVSANIATAEGQSKLKASVNAGYTSNYIVNGLAKTGSQAFTGFDIGTEYYGIDTYVGATVLDAGAGLDELHANVGVGKSIDLFESFSLRGNAQVFQHQVAAGANSTEGRLTLSLENKYITPYVVGTYDLDVASAGYSQRGYIVGLKRSFDVFGVFNLTPSVEYGQMTDYETTSVKLD
Ga0208427_10018331	3300025771	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIRTQYYGFDHYVGAVTLNAGQG
Ga0208427_11621952	3300025771	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAV
Ga0208545_10036981	3300025806	Aqueous	MNKFILSLLSIVVSANLMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGIGKSINLFETFSLKADAQI
Ga0209714_10951242	3300025822	Pelagic Marine	MNKFILSLLSIVVSASIVADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGINTYVGAVVLDAGSGLDELHANVGAGKAINLFESFSLRGDAQIFQHQVAAGANSTEGRLTLALNNKYITPYVVGTYDLDVANTGYS
Ga0208547_11420511	3300025828	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFDGFSLRGDAQVFQHQVA
Ga0208547_12032211	3300025828	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDIKTQYYGFDHYVGAVTLNAGQGLGELHGNVGIGKAIEIFDGLSLRGDAQIFQHQVAQGASSTEGRLSLSLDNKYITPYVIGTYDLDIAGAG
Ga0208917_11264021	3300025840	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAV
Ga0208645_10550724	3300025853	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFE
Ga0208644_10401986	3300025889	Aqueous	MNKFILSLLSVVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDISTQYYGIDTYVGAVTLNAGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVGASSTEGRL
Ga0208644_12284651	3300025889	Aqueous	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGVGKSLNIFDGFSLRGDAQIFQHQ
Ga0209932_10408202	3300026183	Pond Water	MNKFILSLLSIIVSASIMADGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYSGIDTYVGAVVLDAGSGLDELHANVGVGKAIDLFESFSLRGDAQIFQHQVAAGANSTEGRITLSLNNKYITPYVVGTYDLDVANAGYSQRGYIVGLKKSFDV
Ga0209932_10492371	3300026183	Pond Water	MKKFILPLLSIIVSASIATAEDQSKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYYGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLD
(restricted) Ga0233415_101990142	3300027861	Seawater	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHANVGVGKSVNLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQRGYI
Ga0209536_1015792602	3300027917	Marine Sediment	MNKFILSLLSIVVSVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTKYYGIDTYVGAVTLNAGQGLGELHGNVGVGKSLNIFDGFSLRGDAQIFQHQVAQGASSTEGRLSLSLDNKYVTPYLVGTYDLDI
Ga0257114_12290401	3300028196	Marine	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDIGTEYYGIDTYVGATVLDAGTGLDELHANVGVGKSINLFETFSLKADAQIFQHQVAVGANSTEGRLTLALDNKYITPYVVGTYDLDVANRGYSQKG
Ga0183748_10671892	3300029319	Marine	MNKFILSLLSIVVSANIMAEGESKLKASVNAGYTSNYIVNGLAKTGSQSFVGVDVGTQYFGIDTYVGAVTLNAGEGLGELHGNVGIGKAIDLFDGFSLRGDAQVFQHQVVQGANSTEGRI
Ga0310343_104812071	3300031785	Seawater	MNKFILSLLSIVVSANIIAEDESKLKASVNAGYTSNYIVNGLAKTGSQTFVGVDVGTQYFGIDTYVGAVTLNAGEGLGELHGNVGIGKAIDLFDGFSLRGDAQVFEHQVVQGASSTEGRITLSLDNKYITPYVVGTYDLNVA
Ga0315316_107753951	3300032011	Seawater	MNKLVLSLLSVIASVNIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQAFAGVDISTEYHGVNTYVGATVLDAGTGLDELHAN
Ga0348335_083984_719_1063	3300034374	Aqueous	MQHMNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQVFQHQVAVG
Ga0348337_005201_8289_8597	3300034418	Aqueous	MNKFILSLLSIVVSANIVAEGESKLKASVNAGYTSNYIVNGLAKTGSQTFAGVDVSTQYYGIDTYVGAVTLNSGQGLGELHGNVGIGKALNIFEGFSLRGDAQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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