NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068793

Metagenome / Metatranscriptome Family F068793

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068793
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 50 residues
Representative Sequence MVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEE
Number of Associated Samples 108
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 53.23 %
% of genes near scaffold ends (potentially truncated) 98.39 %
% of genes from short scaffolds (< 2000 bps) 91.13 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(27.419 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.065 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.21%    β-sheet: 0.00%    Coil/Unstructured: 90.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF01553Acyltransferase 79.84
PF027395_3_exonuc_N 11.29
PF00850Hist_deacetyl 4.84
PF07730HisKA_3 0.81
PF03950tRNA-synt_1c_C 0.81
PF00196GerE 0.81
PF01751Toprim 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 11.29
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 9.68
COG0008Glutamyl- or glutaminyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.81
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.81
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.81
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.81
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908016|OU_2_1_1_newblercontig34548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium709Open in IMG/M
2124908045|KansclcFeb2_ConsensusfromContig509712All Organisms → cellular organisms → Bacteria874Open in IMG/M
2124908045|KansclcFeb2_ConsensusfromContig573639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium608Open in IMG/M
3300002568|C688J35102_120807279All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300004114|Ga0062593_100947319All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300004114|Ga0062593_101288000All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300004114|Ga0062593_102893304All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005093|Ga0062594_102523101All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005175|Ga0066673_10758887All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005178|Ga0066688_10255959All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300005186|Ga0066676_10769917All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005338|Ga0068868_100923781All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300005437|Ga0070710_10426765All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300005440|Ga0070705_100133749All Organisms → cellular organisms → Bacteria1621Open in IMG/M
3300005444|Ga0070694_100124236All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300005454|Ga0066687_10123007All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300005526|Ga0073909_10529491All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005536|Ga0070697_100567485All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300005549|Ga0070704_100765304All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300005557|Ga0066704_10335557All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300005559|Ga0066700_10826358All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300005569|Ga0066705_10039010All Organisms → cellular organisms → Bacteria2608Open in IMG/M
3300005578|Ga0068854_101909571All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006049|Ga0075417_10272770All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300006603|Ga0074064_10210183All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300006797|Ga0066659_11098390All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300006844|Ga0075428_102750275All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300006904|Ga0075424_100283586All Organisms → cellular organisms → Bacteria1762Open in IMG/M
3300006914|Ga0075436_100340662All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300007255|Ga0099791_10500837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300007265|Ga0099794_10502211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300009098|Ga0105245_10347330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1469Open in IMG/M
3300009098|Ga0105245_11215974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria801Open in IMG/M
3300009098|Ga0105245_11997694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria633Open in IMG/M
3300009137|Ga0066709_100660880All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300009147|Ga0114129_12077620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium686Open in IMG/M
3300009815|Ga0105070_1089362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium600Open in IMG/M
3300010038|Ga0126315_11186149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300010044|Ga0126310_10665080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium785Open in IMG/M
3300010333|Ga0134080_10160669All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300010359|Ga0126376_10150685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1862Open in IMG/M
3300010364|Ga0134066_10387903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300010366|Ga0126379_13562638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria521Open in IMG/M
3300010375|Ga0105239_13126638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300010396|Ga0134126_10110534All Organisms → cellular organisms → Bacteria3367Open in IMG/M
3300010401|Ga0134121_12709794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium541Open in IMG/M
3300011003|Ga0138514_100065901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium753Open in IMG/M
3300012014|Ga0120159_1022872All Organisms → cellular organisms → Bacteria2275Open in IMG/M
3300012201|Ga0137365_10817361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium681Open in IMG/M
3300012208|Ga0137376_10223693All Organisms → cellular organisms → Bacteria1631Open in IMG/M
3300012209|Ga0137379_11573737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300012211|Ga0137377_10600879All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300012211|Ga0137377_11000061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300012211|Ga0137377_11907716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300012351|Ga0137386_10569964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium815Open in IMG/M
3300012353|Ga0137367_10026565All Organisms → cellular organisms → Bacteria4488Open in IMG/M
3300012354|Ga0137366_10733930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium703Open in IMG/M
3300012357|Ga0137384_10144244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1993Open in IMG/M
3300012358|Ga0137368_10837615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium566Open in IMG/M
3300012532|Ga0137373_10116939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2301Open in IMG/M
3300012923|Ga0137359_10523954All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300012951|Ga0164300_11044418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300012957|Ga0164303_10923138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300012961|Ga0164302_11555417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300012977|Ga0134087_10292367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium761Open in IMG/M
3300012986|Ga0164304_11050081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium648Open in IMG/M
3300012988|Ga0164306_10984770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium693Open in IMG/M
3300013308|Ga0157375_11722480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium742Open in IMG/M
3300014058|Ga0120149_1067687All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300014154|Ga0134075_10409990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium599Open in IMG/M
3300014497|Ga0182008_10496587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium670Open in IMG/M
3300015200|Ga0173480_10699947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300015358|Ga0134089_10075115All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300015358|Ga0134089_10226704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300015359|Ga0134085_10269495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium744Open in IMG/M
3300017656|Ga0134112_10097112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1105Open in IMG/M
3300018061|Ga0184619_10009272All Organisms → cellular organisms → Bacteria3823Open in IMG/M
3300018071|Ga0184618_10381992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300018433|Ga0066667_11411076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300018433|Ga0066667_12045978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300018920|Ga0190273_11972848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300019869|Ga0193705_1053847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium824Open in IMG/M
3300020012|Ga0193732_1082652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300022694|Ga0222623_10389960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300025916|Ga0207663_10264765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1271Open in IMG/M
3300025923|Ga0207681_10941435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300025931|Ga0207644_10753284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium814Open in IMG/M
3300025949|Ga0207667_10504074All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300026328|Ga0209802_1182233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium838Open in IMG/M
3300026331|Ga0209267_1294928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300026332|Ga0209803_1355656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300026333|Ga0209158_1367921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300026342|Ga0209057_1234319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria521Open in IMG/M
3300026527|Ga0209059_1096240Not Available1219Open in IMG/M
3300026542|Ga0209805_1336258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300026552|Ga0209577_10878699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium503Open in IMG/M
3300027873|Ga0209814_10219870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium822Open in IMG/M
3300028713|Ga0307303_10016342All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300028722|Ga0307319_10048241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1334Open in IMG/M
3300028755|Ga0307316_10193716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium731Open in IMG/M
3300028771|Ga0307320_10370981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300028778|Ga0307288_10419531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300028784|Ga0307282_10012063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3488Open in IMG/M
3300028784|Ga0307282_10012299All Organisms → cellular organisms → Bacteria3455Open in IMG/M
3300028784|Ga0307282_10067410All Organisms → cellular organisms → Bacteria1621Open in IMG/M
3300028791|Ga0307290_10154961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium839Open in IMG/M
3300028793|Ga0307299_10010330All Organisms → cellular organisms → Bacteria3293Open in IMG/M
3300028796|Ga0307287_10005459All Organisms → cellular organisms → Bacteria4146Open in IMG/M
3300028799|Ga0307284_10085027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1164Open in IMG/M
3300028807|Ga0307305_10278467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium762Open in IMG/M
3300028824|Ga0307310_10371980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium705Open in IMG/M
3300028828|Ga0307312_10161350All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300028828|Ga0307312_10310778All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300028828|Ga0307312_10356093All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300028872|Ga0307314_10017831All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300028884|Ga0307308_10022824All Organisms → cellular organisms → Bacteria2881Open in IMG/M
3300028884|Ga0307308_10444557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300028885|Ga0307304_10089594All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300028885|Ga0307304_10578381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300031740|Ga0307468_101949023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300031938|Ga0308175_100279755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1691Open in IMG/M
3300031938|Ga0308175_102799830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300033551|Ga0247830_10527195All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300033758|Ga0314868_018230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium744Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.42%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.61%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.81%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.81%
Environmental → Unclassified → Unclassified → Unclassified → Unclassified → 0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908016Sample 642EnvironmentalOpen in IMG/M
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033758Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
OU_000777502124908016MSKTLVIAEKPSVGRDLAGALDGAFQRRKLEDIAPKKKRKTAAEAVDEAVEKPTRSR
KansclcFeb2_113128302124908045SoilVAKTLVIAEKPSVGRDLAAALDGPFQRRKLEDIKPKRSRKKADADTNEEVVEK
KansclcFeb2_099540302124908045SoilMVFSMAKTLVIAEKPSVGRDLAAALDGVFQRRKLDDIK
C688J35102_12080727913300002568SoilMVFSMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEETAEEV
Ga0062593_10094731923300004114SoilMVIRMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRG
Ga0062593_10128800013300004114SoilMVFSMGKTLVIAEKPSVGRDLAGALDGVFQRRKLEDIRPKRGRKKVDEESADE
Ga0062593_10289330413300004114SoilVAKTLVIAEKPSVGRDLAAALDGPFQRRKLEDIKPKRSRKKADD
Ga0062594_10252310113300005093SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKK
Ga0066673_1075888723300005175SoilMAKTLVIAEKPSVGRDLASALDGVFQRRTLEDVAPSKRRKKTAEEALDDATTKPKRGRA
Ga0066688_1025595933300005178SoilMVFRMPKTLVIAEKPSVGRDLAAALDGPFQHRKLEDVKPKRGKKKAEETAEEAVEKATSK
Ga0066676_1076991723300005186SoilMVFRMGKILVIAEKPSVGRDLASALDGVFQRRTLEDIAPKRTRK
Ga0068868_10092378113300005338Miscanthus RhizosphereVAKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKKA
Ga0070710_1042676513300005437Corn, Switchgrass And Miscanthus RhizosphereMVVSMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEETNEEVVEAAKS
Ga0070705_10013374933300005440Corn, Switchgrass And Miscanthus RhizosphereMVFLMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKTDEPTNEEV
Ga0070694_10012423633300005444Corn, Switchgrass And Miscanthus RhizosphereMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIRPKRGKKKTDEPTNEEVVEAAKSKTKA
Ga0066687_1012300733300005454SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKRAEETAEEVVEKATSKPK
Ga0073909_1052949123300005526Surface SoilMVFLMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGK
Ga0070697_10056748533300005536Corn, Switchgrass And Miscanthus RhizosphereMVFWMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKK
Ga0070704_10076530413300005549Corn, Switchgrass And Miscanthus RhizosphereMVFLMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKTDEP
Ga0066704_1033555733300005557SoilMVFSMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEETNEEVVEAAKSTTKT
Ga0066700_1082635823300005559SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKKAEET
Ga0066705_1003901013300005569SoilMAKTLVIAEKPSVGRDLASALDGVFQRRLFDDVKPKRTRKKTAEEAVEEATTKPKRTRKT
Ga0068854_10190957123300005578Corn RhizosphereMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKR
Ga0075417_1027277023300006049Populus RhizosphereMVFQMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKK
Ga0074064_1021018323300006603SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKTAAAAEASEDDEEVAAAPARARRRKSA*
Ga0066659_1109839013300006797SoilMVFRMAKTLVIAEKPSVGRDLASALDGVFQRRLFDDVKPKRTRKKTAGEAVEEATTKPKRTRKTDDVH
Ga0075428_10275027523300006844Populus RhizosphereMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKK
Ga0075424_10028358613300006904Populus RhizosphereMVTRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRSRKKADGETAAEVVEKATSKP
Ga0075436_10034066233300006914Populus RhizosphereMAKTLVIAEKPSVGRDLSTALDGVFQRRTLEDVAPKKSRKKTAEEVVDE
Ga0099791_1050083723300007255Vadose Zone SoilMVVWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIK
Ga0099794_1050221123300007265Vadose Zone SoilMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKVEET
Ga0105245_1034733013300009098Miscanthus RhizosphereMVFSMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGRKKAEEETAEEVVEK
Ga0105245_1121597413300009098Miscanthus RhizosphereMVIRMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGRKKAEPETAEEVVEKATSKPK
Ga0105245_1199769423300009098Miscanthus RhizosphereVAKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKKADEETNEE
Ga0066709_10066088013300009137Grasslands SoilMVSDMPKTLVIAEKPSVGRDLAGALDGPFQRRMIV
Ga0114129_1207762013300009147Populus RhizosphereMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRSRKKADEPTN*
Ga0105070_108936223300009815Groundwater SandVAKTLVIAEKPSVGRELAGALDGPFQRRELEDIKPKRGKKKAEGPTNEEVVEAAKSTT
Ga0126315_1118614913300010038Serpentine SoilMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKKVEEETAEEVVEKATSKPRR
Ga0126310_1066508023300010044Serpentine SoilMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEEETAEEIVEKATSKPKAR
Ga0134080_1016066933300010333Grasslands SoilMVFRMVKTLVIAEKPSVGRDLAAALDGPFQRRKLDDIKPKRSRKKAEEPTNEEVVEA
Ga0126376_1015068513300010359Tropical Forest SoilMGKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGRKKADEET
Ga0134066_1038790323300010364Grasslands SoilMVFSMSKTLVIAEKPSVGRDLSGALDGVFQRRTLEDVAPKRTRKKTAEEAVDEATT
Ga0126379_1356263813300010366Tropical Forest SoilMGKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRG
Ga0105239_1312663823300010375Corn RhizosphereMVFSMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGRKKAEEETAEEV
Ga0134126_1011053413300010396Terrestrial SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKTDEPTNEEVVEAAKSKTK
Ga0134121_1270979413300010401Terrestrial SoilMVFLMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIK
Ga0138514_10006590113300011003SoilMVFRMGKILVIAEKPSVGRDLASALDGPFARRKLEDIQPKRKRSKASADGDA
Ga0120159_102287213300012014PermafrostMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKKGKKKTEEPTNEEDVEAA
Ga0137365_1081736113300012201Vadose Zone SoilMVFLMAKTLVIAEKPSVGRDLAGALEGPFLRRKLEDGKPSRKKKKEETNEEVVEAAKSPS
Ga0137376_1022369313300012208Vadose Zone SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEE
Ga0137379_1157373723300012209Vadose Zone SoilMVFPMGKTLVIAEKPSVGRDLASALDGVFQRRTLEDIKPKRTRKKTAEEAVDDATTKPKRSRA
Ga0137377_1060087933300012211Vadose Zone SoilMVLWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEEPTNE
Ga0137377_1100006123300012211Vadose Zone SoilMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEEPTNEEVVE
Ga0137377_1190771613300012211Vadose Zone SoilMPKTLVIAEKPSVGRDLASALEGHFQRRKLDDIKPKRGKKKAEEPTNEEVVEA
Ga0137386_1056996413300012351Vadose Zone SoilMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLEDIKPKRGKKKV
Ga0137367_1002656573300012353Vadose Zone SoilMVFFVGKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIT
Ga0137366_1073393023300012354Vadose Zone SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEQPTN
Ga0137384_1014424413300012357Vadose Zone SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKKAEETAEEV
Ga0137368_1083761513300012358Vadose Zone SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPK
Ga0137373_1011693913300012532Vadose Zone SoilMVFLMAKTLVIAEKPSVGRDLAGALEGPFQRRKLEDVKPPRKKKKEETNE
Ga0137359_1052395433300012923Vadose Zone SoilMVFSMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEETNEEV
Ga0164300_1104441823300012951SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIK
Ga0164303_1092313823300012957SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEPTNEEVVEAAKSTTK
Ga0164302_1155541723300012961SoilMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKK
Ga0134087_1029236723300012977Grasslands SoilVPKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKKVEETAEEVVEKATSKP
Ga0164304_1105008113300012986SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEPTNEEVVE
Ga0164306_1098477023300012988SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNEEVVE
Ga0157375_1172248023300013308Miscanthus RhizosphereMVFSMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPK
Ga0120149_106768713300014058PermafrostMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEEPTNEEVVEA
Ga0134075_1040999023300014154Grasslands SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEPTNEEVV
Ga0182008_1049658723300014497RhizosphereMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKKV
Ga0173480_1069994723300015200SoilMVFSMPKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRSRKKADDDT
Ga0134089_1007511533300015358Grasslands SoilMVLWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGK
Ga0134089_1022670413300015358Grasslands SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEDATNEE
Ga0134085_1026949513300015359Grasslands SoilMSKTLVIAEKPSVGRDLSGALDGVFQRRTLEDVAPKRTRKKTAEEAVDEATTKA
Ga0134112_1009711213300017656Grasslands SoilVTKTLVIAEKPSVGRDLANALEGVFQRRTLEDIAPKRSRKKSAEEVVDDATTKPKRGR
Ga0184619_1000927273300018061Groundwater SedimentMAAGAMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKP
Ga0184618_1038199223300018071Groundwater SedimentMAKTLVIAEKPSVGRDLAGALDGPFQKRKLEDIRPSRKKKKEEETPEEVVEAAKSPSPRSRAREDTHF
Ga0066667_1141107613300018433Grasslands SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRTKKKAE
Ga0066667_1204597823300018433Grasslands SoilMVFRMAKTLVIAEKPSVGRDLAGALDGPFQRRKLEEIKPKRGKKKAEETAEE
Ga0190273_1197284823300018920SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKADEATNEEVVEAAK
Ga0193705_105384723300019869SoilMVFWMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKTD
Ga0193732_108265223300020012SoilMVFSMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPT
Ga0222623_1038996013300022694Groundwater SedimentMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKR
Ga0207663_1026476513300025916Corn, Switchgrass And Miscanthus RhizosphereVPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEETAEEVVEKATS
Ga0207681_1094143513300025923Switchgrass RhizosphereMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPK
Ga0207644_1075328413300025931Switchgrass RhizosphereMVFCMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNED
Ga0207667_1050407433300025949Corn RhizosphereMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKT
Ga0209802_118223313300026328SoilMVFQMGKTLVIAEKPSVGRDLSSALEGVFQRRKLEDVVPK
Ga0209267_129492823300026331SoilMVFEMPKILVIAEKPSVGRDLASALDGVFQRRLFDDVKPKRTRKKTAEEAVEEATTKPKR
Ga0209803_135565623300026332SoilMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKVEETNEEVVEA
Ga0209158_136792123300026333SoilMVFSMSKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKAEETNE
Ga0209057_123431923300026342SoilVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKVEETNE
Ga0209059_109624013300026527SoilMVFEMPKILVIAEKPSVGRDLASALDGVFQRRLFDDVK
Ga0209805_133625823300026542SoilMVFRMPKTLVIAEKPSVGRDLAAALDGPFQHRKLEDVKPKRG
Ga0209577_1087869923300026552SoilMPKTLVIAEKPSVGRDLAGALDGPFQRRKLEDIKPKRGKKR
Ga0209814_1021987013300027873Populus RhizosphereMVFQMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKKAE
Ga0307303_1001634213300028713SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPS
Ga0307319_1004824113300028722SoilMVFWMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPK
Ga0307316_1019371613300028755SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNEEVVEAAKSKTKART
Ga0307320_1037098123300028771SoilVAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKQKVDPETNEEIVEAAKS
Ga0307288_1041953113300028778SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNEEVVEAAKSKTK
Ga0307282_1001206313300028784SoilMVFFMAKTLVIAEKPSVGRDLAGALDGPFQKRKLD
Ga0307282_1001229913300028784SoilMVFWMPKTLVIAEKPSVGRDLAGSLEGPFQRRKLDDIKPKRGKKKVEETS
Ga0307282_1006741013300028784SoilMVFCMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNEEVVEAAKS
Ga0307290_1015496123300028791SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDI
Ga0307299_1001033053300028793SoilMVFWKAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKA
Ga0307287_1000545913300028796SoilMVFWMPKTLVIAEKPSVGRDLAGALEGPFQRRKLDDIKPKRGKKKVEE
Ga0307284_1008502733300028799SoilMVFWMAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEETAEEVVEKA
Ga0307305_1027846723300028807SoilMVFCMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEGPTNEEVV
Ga0307310_1037198023300028824SoilMVFWMSKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKK
Ga0307312_1016135013300028828SoilVAKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVDPETN
Ga0307312_1031077813300028828SoilMVFCMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTNEEVVE
Ga0307312_1035609313300028828SoilMVFWMPKTLVIAEKPSVGRDLAGALDGPVQRRKLDDIKPKRGKKK
Ga0307314_1001783113300028872SoilMAAGAMVFWMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKV
Ga0307308_1002282413300028884SoilMVFWMPKTLVIAEKPSVGRDLAGSLEGPFQRRKLDDIKPKRGKKK
Ga0307308_1044455713300028884SoilMGRYGVSVPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVDPETN
Ga0307304_1008959433300028885SoilMVFSMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEE
Ga0307304_1057838123300028885SoilMVFCMPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKAEEPTK
Ga0307468_10194902313300031740Hardwood Forest SoilMVFSMAKTLVIAEKPSVGRDLAAALDGPFQRRKLDDIRPKRVKKKAEDTA
Ga0308175_10027975513300031938SoilMGKTLVIAEKPSVGRDLAGALDGVFQRRKLDDIKPKRGKKKVEEETNEEV
Ga0308175_10279983023300031938SoilVPKTLVIAEKPSVGRDLAGALDGPFQRRKLDDIKPKRGKKKVEEETAEEVVEKATSKPKATRTT
Ga0247830_1052719513300033551SoilMAKTLIIAEKPSVGRDLAEALPGTFTRRKLEELTKR
Ga0314868_018230_633_7433300033758PeatlandMGKTLVIAEKPSVGRDLASALDGVFQRRTLDDVKPRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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