NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068913

Metagenome / Metatranscriptome Family F068913

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068913
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 53 residues
Representative Sequence MEFLLLWWDDLDDLTHACRHLATSALSEVAAASAPLVTGLSAVGAWLLLRLQ
Number of Associated Samples 96
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 25.20 %
% of genes near scaffold ends (potentially truncated) 27.42 %
% of genes from short scaffolds (< 2000 bps) 79.84 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (79.839 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.581 % of family members)
Environment Ontology (ENVO) Unclassified
(62.097 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.258 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 62.50%    β-sheet: 0.00%    Coil/Unstructured: 37.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF01656CbiA 44.35
PF02518HATPase_c 14.52
PF13589HATPase_c_3 13.71
PF13614AAA_31 2.42
PF00254FKBP_C 2.42
PF01476LysM 1.61
PF13191AAA_16 0.81
PF02325YGGT 0.81
PF00271Helicase_C 0.81
PF00216Bac_DNA_binding 0.81
PF12146Hydrolase_4 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0762Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT familyPosttranslational modification, protein turnover, chaperones [O] 0.81
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.84 %
UnclassifiedrootN/A20.16 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10029856All Organisms → cellular organisms → Bacteria → Proteobacteria3061Open in IMG/M
3300002245|JGIcombinedJ26739_100420126All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300004081|Ga0063454_102060849Not Available506Open in IMG/M
3300004092|Ga0062389_104028049All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria552Open in IMG/M
3300005329|Ga0070683_101718013All Organisms → cellular organisms → Bacteria → Proteobacteria603Open in IMG/M
3300005330|Ga0070690_100341017Not Available1085Open in IMG/M
3300005355|Ga0070671_100332662All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1295Open in IMG/M
3300005355|Ga0070671_101746267All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium552Open in IMG/M
3300005355|Ga0070671_101797783Not Available544Open in IMG/M
3300005367|Ga0070667_100103157Not Available2465Open in IMG/M
3300005367|Ga0070667_100530746All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae1080Open in IMG/M
3300005533|Ga0070734_10191808All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1179Open in IMG/M
3300005538|Ga0070731_10559983All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria761Open in IMG/M
3300005548|Ga0070665_100021416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae6503Open in IMG/M
3300005548|Ga0070665_101944778All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria594Open in IMG/M
3300005569|Ga0066705_10387377All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300005598|Ga0066706_11186830All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria580Open in IMG/M
3300005617|Ga0068859_100314812Not Available1659Open in IMG/M
3300005764|Ga0066903_104373419All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria755Open in IMG/M
3300005842|Ga0068858_100153416Not Available2166Open in IMG/M
3300005983|Ga0081540_1149385All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria924Open in IMG/M
3300006354|Ga0075021_10091259All Organisms → cellular organisms → Bacteria → Proteobacteria1801Open in IMG/M
3300006893|Ga0073928_10609148All Organisms → cellular organisms → Bacteria → Proteobacteria770Open in IMG/M
3300009038|Ga0099829_10798082All Organisms → cellular organisms → Bacteria → Proteobacteria784Open in IMG/M
3300009092|Ga0105250_10367791All Organisms → cellular organisms → Bacteria → Proteobacteria632Open in IMG/M
3300009093|Ga0105240_10525441Not Available1313Open in IMG/M
3300009093|Ga0105240_11882873All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria623Open in IMG/M
3300009101|Ga0105247_10669132Not Available778Open in IMG/M
3300009101|Ga0105247_11622734All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300009143|Ga0099792_10266537All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1003Open in IMG/M
3300009174|Ga0105241_10639988Not Available965Open in IMG/M
3300009174|Ga0105241_12575202All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria510Open in IMG/M
3300009176|Ga0105242_11305015All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300009177|Ga0105248_10666513All Organisms → cellular organisms → Bacteria → Proteobacteria1174Open in IMG/M
3300009177|Ga0105248_10970088Not Available960Open in IMG/M
3300009545|Ga0105237_10062062All Organisms → cellular organisms → Bacteria → Proteobacteria3736Open in IMG/M
3300009545|Ga0105237_12692049Not Available508Open in IMG/M
3300009551|Ga0105238_10283050All Organisms → cellular organisms → Bacteria → Proteobacteria1639Open in IMG/M
3300010359|Ga0126376_11796001All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300010362|Ga0126377_11794429All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium689Open in IMG/M
3300010371|Ga0134125_10021561All Organisms → cellular organisms → Bacteria → Proteobacteria7179Open in IMG/M
3300010401|Ga0134121_10353439All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1316Open in IMG/M
3300010877|Ga0126356_11292971All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium510Open in IMG/M
3300012207|Ga0137381_11786647All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria504Open in IMG/M
3300012210|Ga0137378_10854145All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria823Open in IMG/M
3300012211|Ga0137377_11019635All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria758Open in IMG/M
3300012359|Ga0137385_10038972All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4259Open in IMG/M
3300012359|Ga0137385_10297617All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1389Open in IMG/M
3300012469|Ga0150984_116779080All Organisms → cellular organisms → Bacteria → Proteobacteria534Open in IMG/M
3300012922|Ga0137394_11059848All Organisms → cellular organisms → Bacteria → Proteobacteria672Open in IMG/M
3300012922|Ga0137394_11563333Not Available517Open in IMG/M
3300012924|Ga0137413_10000831All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria11197Open in IMG/M
3300012924|Ga0137413_10854427All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium703Open in IMG/M
3300012924|Ga0137413_10948672All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium671Open in IMG/M
3300012927|Ga0137416_10066392Not Available2598Open in IMG/M
3300012927|Ga0137416_11150069All Organisms → cellular organisms → Bacteria → Proteobacteria698Open in IMG/M
3300012927|Ga0137416_11706930Not Available574Open in IMG/M
3300012927|Ga0137416_11930406Not Available541Open in IMG/M
3300012929|Ga0137404_10515612All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1068Open in IMG/M
3300012929|Ga0137404_11870908Not Available559Open in IMG/M
3300012929|Ga0137404_12226503All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300012931|Ga0153915_13202847All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium532Open in IMG/M
3300013105|Ga0157369_11527076All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300013296|Ga0157374_10854614All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria927Open in IMG/M
3300013306|Ga0163162_10376446All Organisms → cellular organisms → Bacteria → Proteobacteria1553Open in IMG/M
3300013307|Ga0157372_11188146Not Available882Open in IMG/M
3300014325|Ga0163163_10409890All Organisms → cellular organisms → Bacteria → Proteobacteria1414Open in IMG/M
3300014968|Ga0157379_11563576Not Available643Open in IMG/M
3300014968|Ga0157379_12461053Not Available520Open in IMG/M
3300018060|Ga0187765_11080328All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300019789|Ga0137408_1011963All Organisms → cellular organisms → Bacteria → Proteobacteria673Open in IMG/M
3300019789|Ga0137408_1250264All Organisms → cellular organisms → Bacteria → Proteobacteria797Open in IMG/M
3300019888|Ga0193751_1154793All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria818Open in IMG/M
3300019890|Ga0193728_1138053All Organisms → cellular organisms → Bacteria → Proteobacteria1085Open in IMG/M
3300021086|Ga0179596_10555213All Organisms → cellular organisms → Bacteria → Proteobacteria583Open in IMG/M
3300021168|Ga0210406_10818663All Organisms → cellular organisms → Bacteria → Proteobacteria707Open in IMG/M
3300021474|Ga0210390_11149599All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium629Open in IMG/M
3300021479|Ga0210410_11317523All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium615Open in IMG/M
3300022726|Ga0242654_10238667All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria647Open in IMG/M
3300023265|Ga0247780_1211914All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium526Open in IMG/M
3300024288|Ga0179589_10262737All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
3300024347|Ga0179591_1049290All Organisms → cellular organisms → Bacteria → Proteobacteria3033Open in IMG/M
3300025900|Ga0207710_10393444All Organisms → cellular organisms → Bacteria → Proteobacteria711Open in IMG/M
3300025900|Ga0207710_10407107All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium699Open in IMG/M
3300025903|Ga0207680_10304752All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1111Open in IMG/M
3300025913|Ga0207695_11250731All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria623Open in IMG/M
3300025914|Ga0207671_10298320All Organisms → cellular organisms → Bacteria → Proteobacteria1273Open in IMG/M
3300025914|Ga0207671_10385458Not Available1114Open in IMG/M
3300025924|Ga0207694_10303574All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1315Open in IMG/M
3300025961|Ga0207712_10596959All Organisms → cellular organisms → Bacteria → Proteobacteria955Open in IMG/M
3300025986|Ga0207658_10024627All Organisms → cellular organisms → Bacteria → Proteobacteria4212Open in IMG/M
3300026555|Ga0179593_1012845All Organisms → cellular organisms → Bacteria → Proteobacteria3000Open in IMG/M
3300027669|Ga0208981_1025643All Organisms → cellular organisms → Bacteria → Proteobacteria1504Open in IMG/M
3300027826|Ga0209060_10155144All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1061Open in IMG/M
3300027826|Ga0209060_10473544All Organisms → cellular organisms → Bacteria → Proteobacteria568Open in IMG/M
3300027867|Ga0209167_10037943Not Available2334Open in IMG/M
3300027986|Ga0209168_10004972All Organisms → cellular organisms → Bacteria → Proteobacteria8704Open in IMG/M
3300028379|Ga0268266_10017116All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans6191Open in IMG/M
3300028536|Ga0137415_10006906All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria11263Open in IMG/M
3300028536|Ga0137415_10014395All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7852Open in IMG/M
3300030521|Ga0307511_10004866All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans13719Open in IMG/M
3300031057|Ga0170834_110136489All Organisms → cellular organisms → Bacteria → Proteobacteria1480Open in IMG/M
3300031231|Ga0170824_108422580Not Available1106Open in IMG/M
3300031469|Ga0170819_10886794All Organisms → cellular organisms → Bacteria → Proteobacteria874Open in IMG/M
3300031474|Ga0170818_115404889Not Available538Open in IMG/M
3300031507|Ga0307509_10000023All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria242310Open in IMG/M
3300031616|Ga0307508_10848714All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300031715|Ga0307476_10011380All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans5567Open in IMG/M
3300031754|Ga0307475_11230703Not Available582Open in IMG/M
3300031823|Ga0307478_10921232All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria731Open in IMG/M
3300031962|Ga0307479_11528630All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium624Open in IMG/M
3300031962|Ga0307479_11768298All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria571Open in IMG/M
3300032782|Ga0335082_11184887All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium631Open in IMG/M
3300032783|Ga0335079_10113596All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3061Open in IMG/M
3300032829|Ga0335070_10010870All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria10640Open in IMG/M
3300032892|Ga0335081_10141091All Organisms → cellular organisms → Bacteria3469Open in IMG/M
3300032955|Ga0335076_10187862All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1972Open in IMG/M
3300032955|Ga0335076_10221199All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1792Open in IMG/M
3300032955|Ga0335076_11147618All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium660Open in IMG/M
3300033180|Ga0307510_10096907All Organisms → cellular organisms → Bacteria → Proteobacteria2763Open in IMG/M
3300033486|Ga0316624_12255864All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria507Open in IMG/M
3300034384|Ga0372946_0212505All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria933Open in IMG/M
3300034384|Ga0372946_0243128All Organisms → cellular organisms → Bacteria → Proteobacteria870Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.58%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere8.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.06%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere6.45%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.84%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.03%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.23%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.23%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.81%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023265Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1002985633300001661Forest SoilMEFLLLWWDDLDDLTHACRHLATSALAEVAAASAPLVTGLSAVGAWLLLRLQA*
JGIcombinedJ26739_10042012613300002245Forest SoilMEFLLLWWDDLDDLTHACRHLATSALSEVAAASAPLVTGLSAVGAWLLLRLQ
Ga0063454_10206084923300004081SoilMEFLLLWWDNLDDLTHACRHLATSAASELAEAAMAPFAAGLSAMSAWLLLRLQG*
Ga0062389_10402804923300004092Bog Forest SoilLLWWDDLDDLTHACRHLATSALSEVADAVAPRATSLTVVGACLLLRLQG*
Ga0070683_10171801323300005329Corn RhizosphereMEFLLLWWDDLDDITHACRHLVTTAFSELAESVSALAPLASSLSALATWLFAGKPLAAA
Ga0070690_10034101723300005330Switchgrass RhizosphereDDLTHACRHLATSAASESAEVATAPFAAGLSAMSAWLLLRLQG*
Ga0070671_10033266223300005355Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSALSAWLLLRLQG*
Ga0070671_10174626723300005355Switchgrass RhizosphereMEFLLLWWDDLDDFAHACRHLATSAFSEVAAALAPLATGFSAICAWLL
Ga0070671_10179778323300005355Switchgrass RhizosphereMEFLLLWWDDLDDFTHACRHLATSAFSEVAASLAPLATGFSAICAWLLLRLS*
Ga0070667_10010315723300005367Switchgrass RhizosphereMEFLLLWWDDLDDFTHACRHLATSAFSEVAAALAPLATGFSAICAWLLLRLQG*
Ga0070667_10053074623300005367Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEAATAPFASGLSAMSAWLLLRLQG*
Ga0070734_1019180823300005533Surface SoilMEFLLLWWDDLDDLTHACRHLASSAISDFAAAAVPLSTGLTAAGAWLLLRLG*
Ga0070731_1055998313300005538Surface SoilMEFLLLWWDEIDDLTHACRHVATSALSEVVLGAAPLINGTLAMGAWILLHLLSLSPLNFS
Ga0070665_10002141683300005548Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSALSEVAEAAKTPFVTATSTIAAWLLLRLQG*
Ga0070665_10194477813300005548Switchgrass RhizosphereLMNLCDPQHANCHRPYVGSLSMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSALSAWLLLRLQG*
Ga0066705_1038737723300005569SoilMEFLLLWWDNLDDFAHACRHLATSAASELAEAAPFRAGFAAMSAWLLLRLQG*
Ga0066706_1118683013300005598SoilHACRHLATSAASELAEAAPFRAGFAAMSAWLLLRLQG*
Ga0068859_10031481223300005617Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSAMSAWLLLRLQG*
Ga0066903_10437341923300005764Tropical Forest SoilWDDLDDLTHACRHLATSAFSELAELAPTAVPLVNGLSALGAWALLRL*
Ga0068858_10015341623300005842Switchgrass RhizosphereFLLLWWDDLDDFAHACRHLATSAFSEVAAALAPLATGFSAICAWLLLRLQG*
Ga0081540_114938523300005983Tabebuia Heterophylla RhizosphereMEFLLLWWDDFDDFAHACRHLATAAISEVADVASSRATGLTVMAAWLLLRLQG*
Ga0075021_1009125953300006354WatershedsMEFLLLWWDDLDDLTHACRHLATCAFSEVAEAVAASAPLASSLSAAGVWFLLTLTP*
Ga0073928_1060914823300006893Iron-Sulfur Acid SpringMEFLLLWWDDLDDLTHACRHLATSALSEVAATSAQFATGLSAMVAWALLRLQA*
Ga0099829_1079808213300009038Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASAPLVTGLSAVGAWLALRLQG*
Ga0105250_1036779123300009092Switchgrass RhizosphereMEFLLLWWDDLDDFTHACRHLATSAFSEVAASLAPLATGFSAICAWLLL
Ga0105240_1052544123300009093Corn RhizosphereMEFLLLRWDNLDDFTHACRHLATSALSEVADAAKTPFATATTFMTTWLLLALHR*
Ga0105240_1188287313300009093Corn RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAELAAAPFAAGLSALSAWLLLRLHG*
Ga0105247_1066913213300009101Switchgrass RhizosphereLLWWDDLDDFAHACRHLATSAFSEVASTLAPFATGLSALLAWLLIRLQG*
Ga0105247_1162273413300009101Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEAATAPFAASLPAMSAWFLLRL*
Ga0099792_1026653723300009143Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSALAEVGAASAPLVTGLSAVGAWLLLRLQA*
Ga0105241_1063998813300009174Corn RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVARAPFAAGLSALSAWLLLRLHG*
Ga0105241_1257520213300009174Corn RhizosphereEFLLLWWDDLDDLTHACRHLAGSALSELAEAASAAAPLIAGLTALGAWALQRLQA*
Ga0105242_1130501523300009176Miscanthus RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEAATAPFAAGLSAMGAWLLLRL*
Ga0105248_1066651323300009177Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFATGLSAVSAWLLLRLQG*
Ga0105248_1097008813300009177Switchgrass RhizosphereLDDLTHACRHLATSAASEIAEAATAPFVAGFSAMSAWFLLRLQG*
Ga0105237_1006206233300009545Corn RhizosphereMEFLLLWWDNLDDFTHACRHLATSALSEVADAAKTPFATATTFMTTWLLLALHR*
Ga0105237_1269204913300009545Corn RhizosphereMEFLLLWWDNLDDLTHACRHLATSAVSELAEAATAPFAASLSAMSAWFLLRL*
Ga0105238_1028305033300009551Corn RhizosphereMEFLLLWWDNLDDFTHACRHLATSALSEVADAAKTPFATATTFMTTWLLLA
Ga0126376_1179600113300010359Tropical Forest SoilMEFLLLWWDELDDLTHACRHLATSAFSEVALQSAPLINGALAMGAWILLHLLSLGPLN
Ga0126377_1179442923300010362Tropical Forest SoilMEFLLLWWDDLDDLAHACRHLATSAFSELAEAASSAAPLSSSLSALATWLLLRF*
Ga0134125_1002156123300010371Terrestrial SoilMEFLLLWWDELDDLTHACRHLATSALSEVALQSAPLINGALAMGAWILLHLLSLGPLNFS
Ga0134121_1035343913300010401Terrestrial SoilMEFLLLWWDDLDDFTHACRHLATSAFSEIAASLAPLATGFSAICAWLLLRLS*
Ga0126356_1129297123300010877Boreal Forest SoilMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAAATFFLLR*
Ga0137381_1178664723300012207Vadose Zone SoilRMEFLLLWWDDLDDFTHACRHLATSALAELAAAAAPLVTGLSAVGAWLLLRFQA*
Ga0137378_1085414523300012210Vadose Zone SoilMEFLLLWWDDLDDLAHACRHLATSALSEVAAASVPLVTGLSAVGAWLLLRLQA*
Ga0137377_1101963513300012211Vadose Zone SoilMEFLLLWWDDLDDLAHACRHLATSALDEVAAASAPLVTGLSAVGAWLLLRLQA*
Ga0137387_1050018323300012349Vadose Zone SoilMEFLLLWWDDLDDLAHACRHLATSALSEVAAASVPLVTGLSAV
Ga0137385_1003897243300012359Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASAPLVTGLSAVGAWLVLRLQG*
Ga0137385_1029761723300012359Vadose Zone SoilMEFLLLWWDDLDDFTHACRHLATSALAELAAAAAPLVTGLSAVGAWLLLRFQA*
Ga0150984_11677908013300012469Avena Fatua RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEAATAPFAAGLSTMSAWFLLRL*
Ga0137394_1105984813300012922Vadose Zone SoilMEFLLLWWDDLDDFTHACRHLATSAFAEVAAAIAPLATGLSATLAWLLLRLP*
Ga0137394_1156333313300012922Vadose Zone SoilMEFLLLWWDDLDDFTHACRHLATSAFAEVTAAVAPLATGLSAVVAWLLLRLH*
Ga0137413_1000083123300012924Vadose Zone SoilMEFLLLWWDNLDDLTHACRHLATSALSEVADAAKPLFVTATSAMSAWLLLRLQG*
Ga0137413_1085442713300012924Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAAACLLLLRL*
Ga0137413_1094867223300012924Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASAPLITGLSAVGAWLTLRLQG*
Ga0137416_1006639223300012927Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSALDEVAAASAPLVTGLSAAGAWLLLRLQA*
Ga0137416_1115006923300012927Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASTPLVTGLSAVGAWLALRLQG*
Ga0137416_1170693013300012927Vadose Zone SoilVRFVPMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAVATFFLLRL*
Ga0137416_1193040613300012927Vadose Zone SoilVRFVPMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAAACLLLLRL*
Ga0137404_1051561233300012929Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSALEEVTAALAPLATGLSAVLAWLLLRLQA*
Ga0137404_1187090813300012929Vadose Zone SoilMEFLLLWWDDLDDFTHACRHLATSAFAEVAAAVAPLATGLSAVVAWLLLRLP*
Ga0137404_1222650323300012929Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAAATFFLLRL*
Ga0153915_1320284723300012931Freshwater WetlandsMHRSLLRMEFLLLWWDDLDDLTHACRHLATSAISEVVTVSSPMATGLSAVCAWIA
Ga0157369_1152707613300013105Corn RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVARAPFAAGLSALSAWLLLRLQG*
Ga0157374_1085461413300013296Miscanthus RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSALSVWLLLRLHG*
Ga0163162_1037644633300013306Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSAMGAWLLLRLQG*
Ga0157372_1118814613300013307Corn RhizosphereLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSALSAWLLLRLQG*
Ga0163163_1040989023300014325Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVARAPFAVGLSALSAWLLLRLHG*
Ga0157379_1156357613300014968Switchgrass RhizosphereMEFLLLWWDDLDDFAHACRHLATSAFSEVAAALAPLATGFSAICAWLLLRLQG*
Ga0157379_1246105313300014968Switchgrass RhizosphereMEFLLLWWDDLDDFTHACRHLATSAFSEIASTLAPFATGLSALLAWLLIRLQG*
Ga0187765_1108032823300018060Tropical PeatlandMESLLLLWDELDDLTHACRHLATSAVEEVAGLASPFAAAAPAILACLILPLTR
Ga0137408_101196313300019789Vadose Zone SoilMEFLLLWWDDLDDLAHACRHLATSALSEVAAASVPLVTGLSAVGAWLLLLAPATPPGLRRPRR
Ga0137408_125026423300019789Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSALEEVTAALAPLATGLSAVLAWLLLRLQA
Ga0193751_115479323300019888SoilMEFLLLWWDDLDDLTHACRHLATSALAEVAAASAPLVTGLSAVGAWVLLRLQA
Ga0193728_113805323300019890SoilMEFLLLWWDDLDDLTHACRHLATSALAEVAAAAAPLVTGLSAVGAWVLLRLQA
Ga0179596_1055521313300021086Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASTPLVTGLSAVGAWLALR
Ga0210406_1081866313300021168SoilMEFLLLWWDDLDDLTHACRHLATSAISEIVAAVAPFATGLTAVVALLLLR
Ga0210390_1114959923300021474SoilMEFLLLWWDDLDDLTHACRHLAASALSEVASSVSAPVAGVVSTLGAWLQGSIR
Ga0210410_1131752323300021479SoilMEFLLLWWDDLDDLTHACRHLATSALAEVAAAVAPLVTSLSAVGAWLLLRL
Ga0242654_1023866723300022726SoilDDLDDFAHACRHLATSAFSEVTAVSAPLATGLSAAGAWLLLRFHG
Ga0247780_121191423300023265Plant LitterMEFLLLWWDNLDDLTHACRHLATTAITEIAEAATAPFAAGLSAMSAWILLRLQG
Ga0179589_1026273723300024288Vadose Zone SoilMEFLLLWWDNLDDLAHACRHLATSAASELAEAVTAPLVATFSAMSAWFLLRLQG
Ga0179591_104929013300024347Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASAPLITGLSAVGAWLTLRLQG
Ga0207710_1039344423300025900Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSAMSAWLLLRLQG
Ga0207710_1040710723300025900Switchgrass RhizosphereMEFLLLWWDDLDDFTHACRHLATSAFSEVAAALAPLATGFSAICAWLLLRLQG
Ga0207680_1030475213300025903Switchgrass RhizosphereTTRNLFRMEFLLLWWDDLVDFAHACRHLATSAFSEVASTLAPFATGLSALLAWLLIRLQG
Ga0207695_1125073123300025913Corn RhizosphereSVSMEFLLLWWDNLDDLTHACRHLATSAASELAEVARAPFAAGLSALSAWLLLRLQG
Ga0207671_1029832023300025914Corn RhizosphereMEFLLLWWDNLDDFTHACRHLATSALSEVADAAKTPFATATTFMTTWLLLALHR
Ga0207671_1038545813300025914Corn RhizosphereRPYVGSVSMEFLLLWWDNLDDLTHACRHLATSAASELAEVARAPFAAGLSALSAWLLLRLHG
Ga0207694_1030357423300025924Corn RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEVATAPFAAGLSALSAWLLLRLQG
Ga0207712_1059695913300025961Switchgrass RhizosphereMEFLLLWWDDLDDFAHACRHLATSAFSEVAAALAPLATGFSAICAW
Ga0207658_1002462733300025986Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSAASELAEAATAPFASGLSAMSAWLLLRLQG
Ga0179593_101284523300026555Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAFDEVAAASTPLVTGLSAVGAWLALRLQG
Ga0208981_102564323300027669Forest SoilMEFLLLWWDDLDDLTHACRHLATSALAEVAAASAPLVTGLSAVGAWLLLRLQA
Ga0209060_1015514423300027826Surface SoilMEFLLLWWDDLDDLTHACRHLASSAISDFAAAAVPLSTGLTAAGAWLLLRLG
Ga0209060_1047354423300027826Surface SoilMEFLLLWWDEIDDLTHACRHVATCALEEVVTLSEPLIRGASLLGASILVQAPG
Ga0209167_1003794323300027867Surface SoilMEFLLLWWDELDDLTHACRHVATSALDEVVARSEPLIRSASAFGAWVLLQSLRPHPLNFP
Ga0209168_1000497223300027986Surface SoilMEFLLLWWDDLDDLTHACRHLATSALSEVTELSGPVVTGITTAAAWLLVRLQGSSPLNFP
Ga0268266_1001711683300028379Switchgrass RhizosphereMEFLLLWWDNLDDLTHACRHLATSALSEVAEAAKTPFVTATSTIAAWLLLRLQG
Ga0137415_1000690683300028536Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSAISEVAEAARTPFATALSAVATFFLLRL
Ga0137415_1001439553300028536Vadose Zone SoilMEFLLLWWDDLDDLTHACRHLATSALDEVAAASAPLVTGLSAAGAWLLLRLQA
Ga0307511_1000486693300030521EctomycorrhizaMEFLLLWWDDLDDLAHACRHLATSALSEVAAASVPLVTGLSAVGAWLLLRLQA
Ga0170834_11013648933300031057Forest SoilMEFLLLWWDDLDDLTHACRHLATSAISEVAAASAPLASGLTAVGAWLLLRLQG
Ga0170824_10842258013300031231Forest SoilLLLWWDDLDDLTHACRHLATSAASEFAASLAPLATGLSAVCAWFLLRLPG
Ga0170819_1088679423300031469Forest SoilMEFLLLWWDDLDDLTHACRHLATSAASEFAASLAPLATGLSAVCAWFLLRLPG
Ga0170818_11540488913300031474Forest SoilMEFLLLWWDNLDDLTHACRHLATSAASEIAEAATAPFVASFSAMSAWFLLRL
Ga0307509_100000231573300031507EctomycorrhizaMEFLLLWWDDLDDFAHACRHLATSAISEVAEVSAPLVTSLSAAAAWLLPRL
Ga0307508_1084871413300031616EctomycorrhizaMEFLLLWWDNLDDLTHACRHLATSAASEMAEAATAPFVAGFSAMSAWFLLRLQG
Ga0307476_1001138073300031715Hardwood Forest SoilMEFLLLWWDELDDLTHACRHLASSAFSEVAAASVPLVTGATGMSAWVALHAQTWAT
Ga0307475_1123070313300031754Hardwood Forest SoilMEFLLLWWDNLDDFAHACRHLATSAFSELAELNGAAVTALLTTLSALGASLLLRLHS
Ga0307478_1092123223300031823Hardwood Forest SoilWDELDDLTHACRHLASSAFSEVAAASVPLVTGATGMSAWVALHAQTWAT
Ga0307479_1152863023300031962Hardwood Forest SoilMEFLLLWWDDLDDFAHACRHLATSAFSELVEAATPLATGLSAMCAWFLLRLQG
Ga0307479_1176829813300031962Hardwood Forest SoilTHACRHLATSALAEVAAAVAPLVTGLSAVGAWLLLRLQA
Ga0335082_1118488713300032782SoilMEFLLLWWDELDDLAHACRHLATAALTEVAAVAAPLATGLSAFGAWILLRLQG
Ga0335079_1011359623300032783SoilMEFLLLWWDELDDLTHACRHLATAALTEVAAVAAPFATGFSAFGAWILLRLQG
Ga0335070_1001087073300032829SoilMEFLLLWWDELDDLAHACRHLATAALTEVAAAAAPLATGFSAFGAWVLLRLQG
Ga0335081_1014109143300032892SoilSVGLLPMEFLLLWWDELDDLTHACRHLATAALTEVAAVAAPFATGFSAFGAWILLRLQG
Ga0335076_1018786223300032955SoilMEFLLLWWDELDDLAHACRHLATAALTEVAAVAAPLATSFSAFGAWILLRLQG
Ga0335076_1022119923300032955SoilMEFLLLWWDDLDDLAHACRHLATSAFSEVAAASSPLAAGLSAMSAWLLLRLHS
Ga0335076_1114761823300032955SoilMEFLLLWWDDLDDIAHACRHLATSAFSEVAEATTSLATGISAVCAGLLLRL
Ga0307510_1009690743300033180EctomycorrhizaMEFLLLWWDNLDDLTHACRHLATSALSEVADAAKSPFAATTTTIAMTAWLLLRLHG
Ga0316624_1225586423300033486SoilMEFLLLWWDDLDDLTHACRHLATSAFSEFAEAVAPLATGISAAVAWLLLRLQA
Ga0372946_0212505_525_6863300034384SoilMEFLLLWWDDLDDLTHACRHLATSALAEVGAASAPLVTGLSAVGAWLLLRLQA
Ga0372946_0243128_29_1903300034384SoilMEFLLLWWDDLDDLTHACRHLATSALAELAAASAPLVTGLSAVGAWLLLRLQA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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