Metagenome Family F068964

Basic Information
Family ID	F068964
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	49 residues
Representative Sequence	PRSIQPIVQQSAQFNLVDAKLAGSTPLSAYYDNSYIDEIKRSGWLAELWR
Number of Associated Samples	111
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.16 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (98.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.484 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.677 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.31% β-sheet: 0.00% Coil/Unstructured: 57.69%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04909	Amidohydro_2	20.97
PF01717	Meth_synt_2	8.87
PF03781	FGE-sulfatase	3.23
PF08240	ADH_N	2.42
PF09084	NMT1	1.61
PF13620	CarboxypepD_reg	1.61
PF14076	DUF4258	1.61
PF01850	PIN	1.61
PF01061	ABC2_membrane	0.81
PF13483	Lactamase_B_3	0.81
PF01494	FAD_binding_3	0.81
PF13379	NMT1_2	0.81
PF00107	ADH_zinc_N	0.81
PF12681	Glyoxalase_2	0.81
PF13602	ADH_zinc_N_2	0.81
PF00355	Rieske	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	8.87
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.61
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.61
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.61
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.81
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.81
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.84 %
Unclassified	root	N/A	1.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	45.16 %
Unclassified	root	N/A	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	45.16 %
Unclassified	root	N/A	1.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	43.55 %
Unclassified	root	N/A	1.61 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.81 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.81 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	31.45 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	12.10 %
Unclassified	root	N/A	1.61 %
Pseudorivibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Pseudorivibacter	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Thiomargarita	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	31.45 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	12.10 %
Unclassified	root	N/A	1.61 %
Pseudorivibacter rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Pseudorivibacter → Pseudorivibacter rhizosphaerae	0.81 %
Candidatus Thiomargarita nelsonii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_292996_length_1482_cov_7.367746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1514	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2228817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	1003	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1046400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300000956\|JGI10216J12902_102210413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1093	Open in IMG/M
3300000956\|JGI10216J12902_104536817	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300003987\|Ga0055471_10079822	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300003987\|Ga0055471_10147201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300003987\|Ga0055471_10290168	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300003992\|Ga0055470_10075127	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300004156\|Ga0062589_101757757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	621	Open in IMG/M
3300004463\|Ga0063356_103420508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	684	Open in IMG/M
3300004463\|Ga0063356_104483120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	601	Open in IMG/M
3300004479\|Ga0062595_100478773	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300004633\|Ga0066395_10017821	All Organisms → cellular organisms → Bacteria → Proteobacteria	2771	Open in IMG/M
3300004782\|Ga0062382_10049298	Not Available	1541	Open in IMG/M
3300005093\|Ga0062594_100719218	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005166\|Ga0066674_10045968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1961	Open in IMG/M
3300005345\|Ga0070692_10797750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300005356\|Ga0070674_101961456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005438\|Ga0070701_10653591	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005457\|Ga0070662_100438581	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300005526\|Ga0073909_10025012	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300005536\|Ga0070697_100074016	All Organisms → cellular organisms → Bacteria → Proteobacteria	2798	Open in IMG/M
3300005563\|Ga0068855_100074728	All Organisms → cellular organisms → Bacteria	3935	Open in IMG/M
3300005577\|Ga0068857_100161451	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300005764\|Ga0066903_100972580	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300006046\|Ga0066652_100105868	All Organisms → cellular organisms → Bacteria → Proteobacteria	2279	Open in IMG/M
3300006237\|Ga0097621_100236214	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300006845\|Ga0075421_101248174	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006846\|Ga0075430_100266049	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300006854\|Ga0075425_101052658	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	927	Open in IMG/M
3300006854\|Ga0075425_102631884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300006903\|Ga0075426_10171586	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300006904\|Ga0075424_100895372	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006969\|Ga0075419_11403793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300007076\|Ga0075435_101741694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300009012\|Ga0066710_100272472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2462	Open in IMG/M
3300009012\|Ga0066710_103984038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300009053\|Ga0105095_10776259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	536	Open in IMG/M
3300009087\|Ga0105107_10840162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	639	Open in IMG/M
3300009094\|Ga0111539_13038509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300009100\|Ga0075418_12980783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300009147\|Ga0114129_11924746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300009148\|Ga0105243_10817991	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300009148\|Ga0105243_12991851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300009162\|Ga0075423_12944470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300009176\|Ga0105242_12084170	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009553\|Ga0105249_11816741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300009609\|Ga0105347_1016172	All Organisms → cellular organisms → Bacteria → Proteobacteria	2542	Open in IMG/M
3300009609\|Ga0105347_1153666	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300009678\|Ga0105252_10227379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300009818\|Ga0105072_1004759	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300010048\|Ga0126373_13260291	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010329\|Ga0134111_10157972	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010359\|Ga0126376_12969024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300010360\|Ga0126372_11813694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300010362\|Ga0126377_12741820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300010375\|Ga0105239_11754586	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300010400\|Ga0134122_12945897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300011430\|Ga0137423_1166184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300011434\|Ga0137464_1134459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300011434\|Ga0137464_1277759	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	506	Open in IMG/M
3300011445\|Ga0137427_10239013	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012041\|Ga0137430_1024709	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300012199\|Ga0137383_10298382	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300012355\|Ga0137369_10113310	All Organisms → cellular organisms → Bacteria → Proteobacteria	2205	Open in IMG/M
3300012362\|Ga0137361_10808405	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012509\|Ga0157334_1070902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300012924\|Ga0137413_10138310	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300012944\|Ga0137410_10600942	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012986\|Ga0164304_10736526	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300013297\|Ga0157378_11406882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300014154\|Ga0134075_10037108	All Organisms → cellular organisms → Bacteria → Proteobacteria	1992	Open in IMG/M
3300014269\|Ga0075302_1091387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiomargarita → Candidatus Thiomargarita nelsonii	673	Open in IMG/M
3300014311\|Ga0075322_1147039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Pseudorivibacter → Pseudorivibacter rhizosphaerae	577	Open in IMG/M
3300014870\|Ga0180080_1071744	Not Available	597	Open in IMG/M
3300014874\|Ga0180084_1039178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	922	Open in IMG/M
3300014878\|Ga0180065_1037664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	1018	Open in IMG/M
3300015242\|Ga0137412_10426496	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300015373\|Ga0132257_103180680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300017657\|Ga0134074_1304715	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017966\|Ga0187776_10887461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300018063\|Ga0184637_10482776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	723	Open in IMG/M
3300018077\|Ga0184633_10298881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300018081\|Ga0184625_10481265	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300018084\|Ga0184629_10126030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1279	Open in IMG/M
3300018089\|Ga0187774_10028700	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300018422\|Ga0190265_10352201	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300018429\|Ga0190272_10399080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1121	Open in IMG/M
3300018476\|Ga0190274_12085300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	664	Open in IMG/M
3300019997\|Ga0193711_1042055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300020021\|Ga0193726_1284885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300020186\|Ga0163153_10029186	All Organisms → cellular organisms → Bacteria	4204	Open in IMG/M
3300020583\|Ga0210401_11550573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300021063\|Ga0206227_1096999	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300021081\|Ga0210379_10047208	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300021081\|Ga0210379_10193981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	874	Open in IMG/M
3300025312\|Ga0209321_10545020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	512	Open in IMG/M
3300025795\|Ga0210114_1108822	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	560	Open in IMG/M
3300025935\|Ga0207709_10947113	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300026550\|Ga0209474_10133112	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300027252\|Ga0209973_1063631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300027513\|Ga0208685_1103915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300027775\|Ga0209177_10194722	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027840\|Ga0209683_10016326	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300027873\|Ga0209814_10457064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300028381\|Ga0268264_10371246	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300030006\|Ga0299907_10264115	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300030006\|Ga0299907_10313497	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300031229\|Ga0299913_10385440	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300031538\|Ga0310888_10361398	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031538\|Ga0310888_10515307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	717	Open in IMG/M
3300031719\|Ga0306917_10843910	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031740\|Ga0307468_100655761	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031820\|Ga0307473_10546193	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300031833\|Ga0310917_10421665	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031892\|Ga0310893_10567590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300031908\|Ga0310900_11743650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300032013\|Ga0310906_10808838	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300032144\|Ga0315910_10627598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	833	Open in IMG/M
3300033419\|Ga0316601_100851283	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300033481\|Ga0316600_10962814	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300033513\|Ga0316628_100534648	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300033513\|Ga0316628_102254678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.81%
Host-Associated	Host-Associated	24.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.23%
Plants	Host-Associated → Plants	24.19%
Aquatic	Environmental → Aquatic	22.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.74%
Sediment	Environmental → Aquatic → Sediment	12.90%
Freshwater	Environmental → Aquatic → Freshwater	5.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Marine	Environmental → Aquatic → Marine	4.03%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.03%
Loam	Environmental → Terrestrial → Soil → Loam	4.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.61%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00803690	2140918013	Soil	WQQIDAKLAASTPTSAYYDNSYIEEIKKSGFYAQLWR
ICChiseqgaiiDRAFT_22288172	3300000033	Soil	VKDPTVTASSXQPIVQQAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFYAQLWR*
AP72_2010_repI_A100DRAFT_10464001	3300000837	Forest Soil	TADSIQPIVQQSAQFNLVDAKLANSTPMTAYYDNSYIDELKRSGWLAELWK*
JGI10216J12902_1022104132	3300000956	Soil	QPIVQQAAEWNQIDAKLAASTPTSAYYDNSYIDEIKKSGFFAQLWR*
JGI10216J12902_1045368174	3300000956	Soil	QPIVQQAAEWNQIDAKLAASTPTGAYYDNSYIDEIKKSGFFAQLWR*
Ga0055471_100798221	3300003987	Natural And Restored Wetlands	QPIVQQSTEFNVVDAKLAASTPISAYYDNSYIDEIKKSGFFTQLWK*
Ga0055471_101472012	3300003987	Natural And Restored Wetlands	QPIVQQSTEFNVVDAKLAANTPISAYYDNSYIDEIKKSGFFTQLWK*
Ga0055471_102901682	3300003987	Natural And Restored Wetlands	PSSIQPIVQQLIESNLVDTKLANSTPLSAYYDNSYIDEIKKSGFFAQLWR*
Ga0055470_100751272	3300003992	Natural And Restored Wetlands	LIEFGLVDPNLASTTPVSAYYDNSYIEEIKKSGFFAQLWR*
Ga0062589_1017577572	3300004156	Soil	IQPIVQQAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFYAQLWR*
Ga0063356_1034205082	3300004463	Arabidopsis Thaliana Rhizosphere	PIVQQSAQFNIVDAKLAGSTPLSAYYDNSYIDEIKRSGFFAQLWK*
Ga0063356_1044831202	3300004463	Arabidopsis Thaliana Rhizosphere	PIVQQSAQFNIVDAKLAGSTPMSAYYDNSYIDEIKKSGFFTQLWK*
Ga0062595_1004787731	3300004479	Soil	DPTVTPASIQPIVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKKSGWLADLWR*
Ga0066395_100178211	3300004633	Tropical Forest Soil	IKDPTVSPASIQPIVQHAVQWNLVDAKAANGTPLTAYYDNSYVEEIKKSGFFAELWK*
Ga0062382_100492982	3300004782	Wetland Sediment	VTASSIQPIVQQAAEWNQIDAKLTASTPTGAYYDNSYIDEIKKSGFFAQLWR*
Ga0062594_1007192181	3300005093	Soil	PIVQQATEFNLIDAKLAANTPLSAYYDNSYAEEIKRSGWLTELWR*
Ga0066674_100459681	3300005166	Soil	KDPTISPVSIQPIVQQSAQWNLVDAKLATSTPLSAYYDNSYVEEIKRSGFLSELWR*
Ga0070692_107977502	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VQQATEFNLIDAKLAANTPLSAYYDNSYAEEIKRSGWLTELWR*
Ga0070674_1019614562	3300005356	Miscanthus Rhizosphere	KDPTVTPGSIRPIVQQSTEFNLIDAKLAANTPVSVYYDNSYVEEIKRSGWLAELWK*
Ga0070701_106535911	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	SIQPIVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKRAGWLADLWR*
Ga0070662_1004385811	3300005457	Corn Rhizosphere	DPTVTPGSIRPIVQQSTEFNLIDAKLAANTPVSVYYDNSYVEEIKRSGWLAELWK*
Ga0073909_100250123	3300005526	Surface Soil	IFVKDPTVTPGSIQPILQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKRAGWLADLWR*
Ga0070697_1000740163	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DPTVSPASIQPIVQHAVQWNLVDAKAANSTPLTAYYDNSYVEEIKKSGFFTELWK*
Ga0068855_1000747286	3300005563	Corn Rhizosphere	EFNLIDAKLAANTPVSVYYDNSYVEEIKRSGWLAELWK*
Ga0068857_1001614511	3300005577	Corn Rhizosphere	ATDIFVKDPTVTPGSIRPIVQQSAEFNLIDAKLAANTPVSVYYDNSYVEEIKRSGWLAELWK*
Ga0066903_1009725803	3300005764	Tropical Forest Soil	FVKDPTVTPDSIQPIVQQSAQFNLVDAKLANSTPMTAYYDNSYIEELKRSGWLAELWK*
Ga0066652_1001058683	3300006046	Soil	YVKDPTVSPVSIQPIVQQSAQWNLVDAKLASSTPLSAYYDNSYVEEIKRSGFLSELWR*
Ga0097621_1002362143	3300006237	Miscanthus Rhizosphere	VTPGSIRPIVQQSTEFNLIDAQLAANTPVSAYYDNSYVEEIKRSRWLAELWK*
Ga0075421_1012481741	3300006845	Populus Rhizosphere	IFVKDPTVTPGSIRPIIQQSTEFNLIDAKLAATTAVSAYYDNSYVEEIKRSGWLADLWK*
Ga0075430_1002660492	3300006846	Populus Rhizosphere	SASIQPIVQQSAQFNLVDAKLAGSTPIAAYYDNSYVDEIKKSGWLADLWR*
Ga0075425_1010526581	3300006854	Populus Rhizosphere	QFNLVDPKLANSTPMTAYYDNSYVEELKRSGWLTELWK*
Ga0075425_1026318842	3300006854	Populus Rhizosphere	LDVFVKDPTVSPSSIQPIVQHAVQWNLVDAKVANSTPLAAFYDNSYVEEIKRSGFFAELWK*
Ga0075426_101715861	3300006903	Populus Rhizosphere	TPGSIRPIVQQSTEFNLIDAKLAATTPASAYYDNSYVDEIKRSGWLAELWR*
Ga0075424_1008953722	3300006904	Populus Rhizosphere	VQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKRAGWLADLWR*
Ga0075419_114037932	3300006969	Populus Rhizosphere	SAQFNLVDPKLANSTPMTAYYDNSYVEELKRSGWLTELWK*
Ga0075435_1017416942	3300007076	Populus Rhizosphere	IVQQSTEFNLIDAQLAANTPVSAYYDNSYVEEIKRSRWLAELWK*
Ga0066710_1002724721	3300009012	Grasslands Soil	QFNLVDAKLAGSTPLSAYYDNSYIDEIKRSGWLAELWR
Ga0066710_1039840382	3300009012	Grasslands Soil	VFIKDPTVTAASIQPIVQQSAQFNLVDAKLANSTPLTAYYDNSYVEELKRSGWLAELWK
Ga0105095_107762592	3300009053	Freshwater Sediment	VKDPAVTPGSIQPIVQQSAQFNLIDAKLAATTPVSAYYDNSYVDEIKKSGFFTQLWK*
Ga0105107_108401621	3300009087	Freshwater Sediment	DPAVTPGSIQPIVQQSAQFNLVDAKLAASTPVSAYYDNSYVDEIKKSGFFAQLWK*
Ga0111539_130385091	3300009094	Populus Rhizosphere	TEFNLIDAKLAANTPLSAYYDNSYAEEIKRSGWLTELWR*
Ga0075418_129807831	3300009100	Populus Rhizosphere	DPTVTSASIQPIVQQSAQFNLVDAKLAGSTPIAAYYDNSYVDEIKKSGWLADLWR*
Ga0114129_119247461	3300009147	Populus Rhizosphere	PRSIQPIVQQSAQFNLVDAKLAGSTPLSAYYDNSYIDEIKRSGWLAELWR*
Ga0105243_108179912	3300009148	Miscanthus Rhizosphere	IVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKKSGWLADLWR*
Ga0105243_129918512	3300009148	Miscanthus Rhizosphere	TVTAGSIRPIVQQSTEFNLIDAKLAANTPVSAYYDNSYVEEIKRSGWLAELWK*
Ga0075423_129444702	3300009162	Populus Rhizosphere	VTADSIQPIVQQSAQFNLVDPKLANSTPMTAYYDNSYVEELKRSGWLTELWK*
Ga0105242_120841702	3300009176	Miscanthus Rhizosphere	IQPIVQQAAEWNQIDAKQAAATLVSTYYDNSYIDEIKKSGFFAQLWR*
Ga0105249_118167412	3300009553	Switchgrass Rhizosphere	FVKDPTVTPDSIRPIVQQATEFNLIDAKLAANTPLSAYYDNSYAEEIKRSGWLTELWR*
Ga0105347_10161721	3300009609	Soil	QIDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLWR*
Ga0105347_11536661	3300009609	Soil	KDPTVNASSIQPIVQQAAEWNQIDAKMAASTPTSAYYDNSYIEEIKKSGFFAQLWR*
Ga0105252_102273791	3300009678	Soil	QAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFFAQLWR*
Ga0105072_10047591	3300009818	Groundwater Sand	QSAQFNLVDAKLANSTPLTAYYDNSYVDELKRSGWLAELWK*
Ga0126373_132602911	3300010048	Tropical Forest Soil	DPTVSFASIQPIVQHAVQWNLVDAKAANSTPLTAYYDNSYVEEIKRSGFFAELWK*
Ga0134111_101579721	3300010329	Grasslands Soil	WNLVDAKLASSTPLSAYYDNSYVEEIKRSGFLSELWR*
Ga0126376_129690241	3300010359	Tropical Forest Soil	TEFNLIDAKLSATTPVSAYYDNSYVEEIKRSGWLAELWK*
Ga0126372_118136941	3300010360	Tropical Forest Soil	PSSIQPIVQQSAQWNLIDAKLASSTPLSAYYDNSYVDEINLSGFFSELWK*
Ga0126377_127418202	3300010362	Tropical Forest Soil	VDAKMAHTTPMTAYYDNTYVEELKRSGWLAELWK*
Ga0105239_117545861	3300010375	Corn Rhizosphere	STEFNLIDAQLAANTPVSAYYDNSYVEEIKRSRWLAELWK*
Ga0134122_129458972	3300010400	Terrestrial Soil	TAQSIQPIVQQSAQFNLVDAKLAANTPLSAYYDNSYIDEIKKSGFFSQLWK*
Ga0137423_11661841	3300011430	Soil	VTASSIQPIVQQAAEWQQIDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLWR*
Ga0137464_11344591	3300011434	Soil	PIVQQAAEWQQIDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLWR*
Ga0137464_12777592	3300011434	Soil	NSIQPIVQQSAQFNLIDTKLANATPMSAYYDNIYIDEIKRSGWLAELWR*
Ga0137427_102390133	3300011445	Soil	SIQPIVQQAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFFAQLWR*
Ga0137430_10247092	3300012041	Soil	KDPTVTASSIQPIVQQAAEWNQIDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLWR*
Ga0137383_102983822	3300012199	Vadose Zone Soil	VDAKLAGGTPTSDYSDNSYVEEIKRAGWLAELWR*
Ga0137369_101133103	3300012355	Vadose Zone Soil	FLVDTKLAGSMPLSAYYDNSFVEEIKRSGWLAELWR*
Ga0137361_108084051	3300012362	Vadose Zone Soil	ADSIQPIVQQSVQFNLVDAKAASSVPLSAYYDNSYVEELKRSGWLAELWK*
Ga0157334_10709021	3300012509	Soil	DIFVKDPTVTPASIQPIVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKKSGWLADLWR
Ga0137413_101383101	3300012924	Vadose Zone Soil	FNLVDAKLAGNTPIAAYYDNSYVDEIKKSGWLADLWR*
Ga0137410_106009421	3300012944	Vadose Zone Soil	LDVFVKDPTVTPGSIQPIVQQSAQFNLIDAKLAGSTPIGAYYDNSYVDEIKRTGWLADLWR*
Ga0164304_107365261	3300012986	Soil	TVTPDSIRPIVQQATEFNLIDAKLAANTPLSAYYDNSYAEEIKRSGWLTELWR*
Ga0157378_114068822	3300013297	Miscanthus Rhizosphere	VQQSTEFNLIDAKLAANTPVSAYYDNSYVEEIKRSGWLAELWK*
Ga0134075_100371083	3300014154	Grasslands Soil	LEVYVKDPTVSPVSIQPIVQQSAQWNLVDAKLATSTPLSAYYDNSYVEEIKRSGFLSELWR*
Ga0075302_10913872	3300014269	Natural And Restored Wetlands	PIVQQSAQFNLVDTKLANATPMSAYYDNSYVEEIKRSGWLAELWR*
Ga0075322_11470391	3300014311	Natural And Restored Wetlands	SIQPVVQQLIESNLIDSKIAGATPVSAYYDDSYIAVIKKSGFYAQLWPRS*
Ga0180080_10717441	3300014870	Soil	IDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLWR*
Ga0180084_10391781	3300014874	Soil	QSAQWNLIDAKAANSTPLSAYYDNSYVDEIKQSGFLAELWR*
Ga0180065_10376641	3300014878	Soil	PTVTPGSIQPIVQQSAQWNLIDAKAANSTPLSAYYDNSYVDEIKRSGFLAELWK*
Ga0137412_104264962	3300015242	Vadose Zone Soil	AHALVDAKLAGNTPIGAYYDNSYVDEIKRAGWLADLWR*
Ga0132257_1031806801	3300015373	Arabidopsis Rhizosphere	TVTPASIQPIVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKRAGWLADLWR*
Ga0134074_13047152	3300017657	Grasslands Soil	VSIQPIVQQSAQWNLVDAKLASSTPLSAYYDNTYVEEIKRSGFLSELWR
Ga0187776_108874611	3300017966	Tropical Peatland	KDPTVTPSSIQPIVQQSAQFNLIDVKLANSTPLSAYYDNSYIEEIKKSGFFAQLWR
Ga0184637_104827761	3300018063	Groundwater Sediment	PIVQQSAQFNLIDAKLANNTPLSAYYDNNYIEEIKRSGWLAELWR
Ga0184633_102988812	3300018077	Groundwater Sediment	RFALDIYVKDPTVTASSIQPIIQQAAEWNQIDAKLASATPTSAYYDNSYIEEIKKSGFFAQLWR
Ga0184625_104812652	3300018081	Groundwater Sediment	DSIQPIVQQSAQFNLVDVKLATSTPMTAYYDNSYVEELKRSGWLAELWK
Ga0184629_101260301	3300018084	Groundwater Sediment	PIVQQSAQFNLIDTKLANATPMSAYYDNSYVDEIKRSGWLAELWR
Ga0187774_100287001	3300018089	Tropical Peatland	IQPIVQQSAQFNLIDVKLANSTPLSAYYDNSYIDEIKRSGWLAELWR
Ga0190265_103522013	3300018422	Soil	FNLIDAKLAATTPVSAYYDNSYVDEIKKSGFFTQLWK
Ga0190272_103990803	3300018429	Soil	VQQAAEWNQIDAKLAASTPTSAYYDNSFIDEIKKSGFFAQLWK
Ga0190274_120853001	3300018476	Soil	QQSAQFNLVEAKLASNTPMSAYYDNSYVDDLKRSGWLAELWR
Ga0193711_10420551	3300019997	Soil	FNLVDAKLAGSTPIGAYYDNSYVDEIKKSGWLADLWR
Ga0193726_12848851	3300020021	Soil	FALDIFVKDPTVTAQSIQPIVQQSAQFNLVDAKLAANTPLSAYYDNSYIDAIKKSGFFSQLWK
Ga0163153_100291865	3300020186	Freshwater Microbial Mat	VTASSIQPIVQQAAEWNQIDAKLAASTQTSAYYDNSYIEEIKKSGFFAQLWR
Ga0210401_115505731	3300020583	Soil	SIQPIVQHAVQWNLVEAKAANSTPMSAYYDNSYVEEIKKSGFFTELWK
Ga0206227_10969992	3300021063	Deep Subsurface Sediment	IQPIVQQSAQFNLVDAKLAGSTPITAYFDNSYVDEIKRTGWLTELWR
Ga0210379_100472083	3300021081	Groundwater Sediment	AQFNLVDGKLANSTPMTAYYDNSYVEELKRSGWLAELWK
Ga0210379_101939812	3300021081	Groundwater Sediment	VTPGSIQPIVQQSAQWNLIDAKAANSTPLSAYYDNSYVDEIKRSGFLAELWK
Ga0209321_105450201	3300025312	Soil	YVKDPTVTPSSIQPIVQQLVESGLIDAKLANTTPLSAYYDNSYIDEIKRSGFFAQLWK
Ga0210114_11088221	3300025795	Natural And Restored Wetlands	FLLSASAYAAPASIQPIVQQSAHWHLIDVKAAGATRLSAYCDNSYVDEIKRSGFLAELWK
Ga0207709_109471131	3300025935	Miscanthus Rhizosphere	VTPGSIRPIVQQSAEFNLIDAKLAANTPVSVYYDNSYVEEIKRSGWLAELWK
Ga0209474_101331123	3300026550	Soil	QWNLVDAKLASSTPLSAYYDNSYVEEIKRSGFLSELWR
Ga0209973_10636311	3300027252	Arabidopsis Thaliana Rhizosphere	PIVQQSAEFNVVDAKLASNTPIGAYYDNSYIEEIKKSGFFTQLWK
Ga0208685_11039152	3300027513	Soil	LDIYVKDPTVTASSIQPIVQQAAEWQQIDAKLAASTPTNAYYDNSYIEEIKKSGFFAQLW
Ga0209177_101947222	3300027775	Agricultural Soil	PTVTSDSIRPIVQQSTEFNLIDAKLAANTPMSAYYDNSYVEEIKRSGWLAELWK
Ga0209683_100163263	3300027840	Wetland Sediment	VTASSIQPIVQQAAEWNQIDAKLTASTPTGAYYDNSYIDEIKKSGFFAQLWR
Ga0209814_104570642	3300027873	Populus Rhizosphere	AQFNLVDPKLANSTPMTAYYDNSYVEELKRSGWLTELWK
Ga0268264_103712461	3300028381	Switchgrass Rhizosphere	IQPIVQQSAQFNLVDARLAGSTPIGAYYDNSYVDEIKRAGWLADLWR
Ga0299907_102641151	3300030006	Soil	DIYVKDPTVTPSSIQPIVQQLVESGLIDAKLANTTPLSAYYDNSYIDEIKRSGFFAQLWK
Ga0299907_103134972	3300030006	Soil	IFVKDPTVTLGSIQPIVQQSAQWNLIDAKAAVATPLSAYYDNSYVDEIKRSGFLAELWK
Ga0299913_103854401	3300031229	Soil	ALDIFVKDPTVTAGSIQPIVQQSAQWNLIDAKAAVATPLSAYYDNSYVDEIKRSGFLAELWK
Ga0310888_103613982	3300031538	Soil	IRPIVQQSTEFNLIDAKLAANTPVSAYYDNSYVEEIKRSGWLAELWK
Ga0310888_105153072	3300031538	Soil	AAEWQQIDAKLAASTPTSAYCDNSYIEEIKKSGFFPQIWR
Ga0306917_108439102	3300031719	Soil	DVFVRDPTVTPNSIQPIVHQSVQFNLVDAKVANSTPLTAYYDNSYVEELKRSGWLAELWK
Ga0307468_1006557611	3300031740	Hardwood Forest Soil	TPASIQPIVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKRAGWLADLWR
Ga0307473_105461932	3300031820	Hardwood Forest Soil	VFIKDPTVSPASIQPIVQHAVQWNLVDAKAANSTPLTAYYDNSYVEEIKKSGFFTELWK
Ga0310917_104216651	3300031833	Soil	VTPGSIRPIVQQSTEFNLIDSKLAGNTPVSAYYDNSYIEEIKRSGWLAELWR
Ga0310893_105675902	3300031892	Soil	PASIQPIVQQSAQFNLIDAKLAGNTPIGAYYDNSYVDEIKRSGWLADLWR
Ga0310900_117436501	3300031908	Soil	SAQFNLVDAKLVNSTPLTAYYDNSYVDELKRSGWLAELWK
Ga0310906_108088382	3300032013	Soil	IVQQSAQFNLVDAKLAGSTPIGAYYDNSYVDEIKKSGWLADLWR
Ga0315910_106275981	3300032144	Soil	IVDAKTAGNTPMSAYYDNSYIEEIKKSGFFAQLWK
Ga0316601_1008512833	3300033419	Soil	TVTASSIQPIVQQAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFFAQLWR
Ga0316600_109628141	3300033481	Soil	KAPTVTASSIQPIVQQAAEWQQIDAKLAASTPTSAYYDNSYIEEIKKSGFFAQLWR
Ga0316628_1005346481	3300033513	Soil	LIESNLVDAKLANATPLSAYYDNSYIEEIKKSGFFAQLWR
Ga0316628_1022546782	3300033513	Soil	QLIESNLVDTKLANSTPLSAYYDNSYIEEIKKSGFFAQLWR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign