Metagenome Family F068993

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068993
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	50 residues
Representative Sequence	VKTEVYDYFFNEWLKVKEEYAIKKGIHSFSAYVTYRLAQLINEDKKINKEK
Number of Associated Samples	88
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	12.20 %
% of genes near scaffold ends (potentially truncated)	35.48 %
% of genes from short scaffolds (< 2000 bps)	75.81 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (66.935 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (17.742 % of family members)
Environment Ontology (ENVO)	Unclassified (53.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (37.097 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.96% β-sheet: 0.00% Coil/Unstructured: 43.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00709	Adenylsucc_synt	41.94
PF03692	CxxCxxCC	6.45
PF04055	Radical_SAM	1.61
PF00355	Rieske	1.61
PF00343	Phosphorylase	0.81
PF13426	PAS_9	0.81
PF03551	PadR	0.81
PF01877	RNA_binding	0.81
PF13439	Glyco_transf_4	0.81
PF00578	AhpC-TSA	0.81
PF00118	Cpn60_TCP1	0.81
PF03104	DNA_pol_B_exo1	0.81
PF00557	Peptidase_M24	0.81
PF12706	Lactamase_B_2	0.81
PF00005	ABC_tran	0.81
PF12724	Flavodoxin_5	0.81
PF08714	Fae	0.81
PF01613	Flavin_Reduct	0.81
PF00069	Pkinase	0.81
PF12704	MacB_PCD	0.81
PF12850	Metallophos_2	0.81
PF12641	Flavodoxin_3	0.81
PF02416	TatA_B_E	0.81
PF00361	Proton_antipo_M	0.81
PF07690	MFS_1	0.81
PF01797	Y1_Tnp	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	41.94
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.23
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.81
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	0.81
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1795	Formaldehyde-activating enzyme (5,6,7,8-tetrahydromethanopterin hydrolyase)	Energy production and conversion [C]	0.81
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.81
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	66.94 %
Unclassified	root	N/A	29.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	24.19 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	15.32 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	15.32 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	15.32 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	15.32 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	15.32 %
unclassified Cytophagales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	15.32 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	3.23 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig352627	All Organisms → cellular organisms → Archaea	2462	Open in IMG/M
3300001213\|JGIcombinedJ13530_103935169	Not Available	593	Open in IMG/M
3300001213\|JGIcombinedJ13530_105309779	All Organisms → cellular organisms → Archaea	837	Open in IMG/M
3300001213\|JGIcombinedJ13530_105938388	All Organisms → cellular organisms → Archaea	633	Open in IMG/M
3300001213\|JGIcombinedJ13530_105948749	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
3300001213\|JGIcombinedJ13530_107964447	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	937	Open in IMG/M
3300003432\|JGI20214J51088_10062726	Not Available	2595	Open in IMG/M
3300004775\|Ga0007798_10064280	Not Available	818	Open in IMG/M
3300004776\|Ga0007800_10020748	All Organisms → cellular organisms → Archaea	1595	Open in IMG/M
3300006224\|Ga0079037_101217480	Not Available	749	Open in IMG/M
3300006795\|Ga0075520_1058519	All Organisms → cellular organisms → Archaea	1830	Open in IMG/M
3300006949\|Ga0075528_10078446	Not Available	860	Open in IMG/M
3300007072\|Ga0073932_1019451	All Organisms → cellular organisms → Archaea	4732	Open in IMG/M
3300007910\|Ga0111549_1072006	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300009053\|Ga0105095_10023963	All Organisms → cellular organisms → Archaea	3288	Open in IMG/M
3300009053\|Ga0105095_10443447	Not Available	718	Open in IMG/M
3300009078\|Ga0105106_10600045	Not Available	789	Open in IMG/M
3300009085\|Ga0105103_10324740	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	842	Open in IMG/M
3300009131\|Ga0115027_10915926	All Organisms → cellular organisms → Archaea	679	Open in IMG/M
3300009146\|Ga0105091_10264346	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300009168\|Ga0105104_10512733	All Organisms → cellular organisms → Archaea	676	Open in IMG/M
3300009179\|Ga0115028_10328810	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1041	Open in IMG/M
3300009502\|Ga0114951_10000292	All Organisms → cellular organisms → Archaea	72803	Open in IMG/M
3300009637\|Ga0116118_1128584	Not Available	832	Open in IMG/M
3300009639\|Ga0116122_1013290	All Organisms → cellular organisms → Archaea → TACK group	3064	Open in IMG/M
3300009639\|Ga0116122_1123401	Not Available	833	Open in IMG/M
3300009640\|Ga0116126_1253356	Not Available	551	Open in IMG/M
3300009643\|Ga0116110_1084100	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1095	Open in IMG/M
3300009644\|Ga0116121_1303411	Not Available	515	Open in IMG/M
3300009645\|Ga0116106_1205751	Not Available	626	Open in IMG/M
3300009764\|Ga0116134_1122397	Not Available	929	Open in IMG/M
3300010339\|Ga0074046_10042217	All Organisms → cellular organisms → Archaea	3060	Open in IMG/M
3300010341\|Ga0074045_10174648	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1449	Open in IMG/M
3300010341\|Ga0074045_10258580	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1150	Open in IMG/M
3300012931\|Ga0153915_13111441	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300012964\|Ga0153916_11394786	Not Available	777	Open in IMG/M
3300012964\|Ga0153916_12628793	Not Available	567	Open in IMG/M
3300014498\|Ga0182019_10574175	All Organisms → cellular organisms → Archaea	789	Open in IMG/M
3300014502\|Ga0182021_10000983	All Organisms → cellular organisms → Archaea	32551	Open in IMG/M
3300014502\|Ga0182021_10015965	All Organisms → cellular organisms → Archaea	8926	Open in IMG/M
3300014502\|Ga0182021_10038256	All Organisms → cellular organisms → Archaea	5630	Open in IMG/M
3300014502\|Ga0182021_10045290	All Organisms → cellular organisms → Archaea → TACK group	5143	Open in IMG/M
3300014502\|Ga0182021_10047401	All Organisms → cellular organisms → Archaea	5017	Open in IMG/M
3300014502\|Ga0182021_10728672	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1190	Open in IMG/M
3300014502\|Ga0182021_11046302	Not Available	982	Open in IMG/M
3300017925\|Ga0187856_1023390	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3091	Open in IMG/M
3300017925\|Ga0187856_1089856	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1241	Open in IMG/M
3300017925\|Ga0187856_1110627	Not Available	1078	Open in IMG/M
3300017935\|Ga0187848_10031575	All Organisms → cellular organisms → Archaea	2668	Open in IMG/M
3300017946\|Ga0187879_10877869	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	502	Open in IMG/M
3300017947\|Ga0187785_10283480	All Organisms → cellular organisms → Archaea	755	Open in IMG/M
3300017959\|Ga0187779_10342525	Not Available	964	Open in IMG/M
3300017959\|Ga0187779_10690369	All Organisms → cellular organisms → Archaea	690	Open in IMG/M
3300017961\|Ga0187778_10331357	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	989	Open in IMG/M
3300017973\|Ga0187780_10991716	All Organisms → cellular organisms → Archaea	612	Open in IMG/M
3300017974\|Ga0187777_10255907	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1189	Open in IMG/M
3300017975\|Ga0187782_10077522	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2431	Open in IMG/M
3300017995\|Ga0187816_10438056	Not Available	584	Open in IMG/M
3300017996\|Ga0187891_1067616	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1435	Open in IMG/M
3300017996\|Ga0187891_1158245	Not Available	800	Open in IMG/M
3300017996\|Ga0187891_1256997	Not Available	579	Open in IMG/M
3300018013\|Ga0187873_1119596	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1026	Open in IMG/M
3300018014\|Ga0187860_1053907	All Organisms → cellular organisms → Archaea → TACK group	2012	Open in IMG/M
3300018014\|Ga0187860_1078920	Not Available	1554	Open in IMG/M
3300018016\|Ga0187880_1000192	All Organisms → cellular organisms → Archaea	52518	Open in IMG/M
3300018016\|Ga0187880_1005987	All Organisms → cellular organisms → Archaea → TACK group	8659	Open in IMG/M
3300018016\|Ga0187880_1487442	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300018017\|Ga0187872_10125074	Not Available	1257	Open in IMG/M
3300018023\|Ga0187889_10083725	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1610	Open in IMG/M
3300018033\|Ga0187867_10348458	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	824	Open in IMG/M
3300018033\|Ga0187867_10440735	All Organisms → cellular organisms → Archaea	719	Open in IMG/M
3300018035\|Ga0187875_10661419	Not Available	549	Open in IMG/M
3300018037\|Ga0187883_10255915	All Organisms → cellular organisms → Archaea → TACK group	895	Open in IMG/M
3300018043\|Ga0187887_10864209	Not Available	535	Open in IMG/M
3300018057\|Ga0187858_10017123	All Organisms → cellular organisms → Archaea	5782	Open in IMG/M
3300018062\|Ga0187784_10145156	All Organisms → cellular organisms → Archaea	1938	Open in IMG/M
3300018062\|Ga0187784_10226693	Not Available	1523	Open in IMG/M
3300018062\|Ga0187784_10655034	All Organisms → cellular organisms → Archaea	842	Open in IMG/M
3300018085\|Ga0187772_10168518	All Organisms → cellular organisms → Archaea	1458	Open in IMG/M
3300018085\|Ga0187772_11168078	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300018085\|Ga0187772_11277314	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300018086\|Ga0187769_10006496	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7209	Open in IMG/M
3300018086\|Ga0187769_10063349	All Organisms → cellular organisms → Archaea → TACK group	2594	Open in IMG/M
3300018086\|Ga0187769_11319614	Not Available	546	Open in IMG/M
3300018086\|Ga0187769_11548001	Not Available	501	Open in IMG/M
3300018088\|Ga0187771_10029451	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4169	Open in IMG/M
3300018088\|Ga0187771_10343218	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1255	Open in IMG/M
3300018088\|Ga0187771_10617308	Not Available	919	Open in IMG/M
3300018088\|Ga0187771_11638167	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300018090\|Ga0187770_11602136	All Organisms → cellular organisms → Archaea	531	Open in IMG/M
3300020814\|Ga0214088_1987011	All Organisms → cellular organisms → Archaea → TACK group	794	Open in IMG/M
3300022553\|Ga0212124_10346264	All Organisms → cellular organisms → Archaea	785	Open in IMG/M
3300022554\|Ga0212093_1030497	All Organisms → cellular organisms → Archaea	3563	Open in IMG/M
3300022555\|Ga0212088_10000087	All Organisms → cellular organisms → Archaea	178075	Open in IMG/M
3300025313\|Ga0209431_10714444	Not Available	739	Open in IMG/M
3300025650\|Ga0209385_1117732	All Organisms → cellular organisms → Archaea	834	Open in IMG/M
3300025852\|Ga0209124_10358447	Not Available	536	Open in IMG/M
3300025865\|Ga0209226_10224951	All Organisms → cellular organisms → Archaea	814	Open in IMG/M
3300025891\|Ga0209585_10001584	All Organisms → cellular organisms → Archaea	8772	Open in IMG/M
3300025891\|Ga0209585_10005758	All Organisms → cellular organisms → Archaea	4537	Open in IMG/M
3300026486\|Ga0256820_1000804	All Organisms → cellular organisms → Archaea	3369	Open in IMG/M
3300027762\|Ga0209288_10329059	Not Available	511	Open in IMG/M
3300027890\|Ga0209496_10267319	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	844	Open in IMG/M
3300027896\|Ga0209777_10492904	All Organisms → cellular organisms → Archaea	905	Open in IMG/M
3300027979\|Ga0209705_10495500	Not Available	597	Open in IMG/M
3300029799\|Ga0311022_10404096	All Organisms → cellular organisms → Archaea → TACK group	890	Open in IMG/M
3300030114\|Ga0311333_10491273	All Organisms → cellular organisms → Archaea → TACK group	1005	Open in IMG/M
3300031232\|Ga0302323_100511047	All Organisms → cellular organisms → Archaea	1290	Open in IMG/M
3300031344\|Ga0265316_10707869	All Organisms → cellular organisms → Archaea	710	Open in IMG/M
3300032173\|Ga0315268_11605469	Not Available	663	Open in IMG/M
3300032783\|Ga0335079_11396856	All Organisms → cellular organisms → Archaea	695	Open in IMG/M
3300032805\|Ga0335078_10029076	All Organisms → cellular organisms → Archaea → TACK group	8209	Open in IMG/M
3300032829\|Ga0335070_11141596	All Organisms → cellular organisms → Archaea	716	Open in IMG/M
3300032829\|Ga0335070_11676089	All Organisms → cellular organisms → Archaea	577	Open in IMG/M
3300033405\|Ga0326727_11190024	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	532	Open in IMG/M
3300033419\|Ga0316601_100738883	All Organisms → cellular organisms → Archaea	969	Open in IMG/M
3300033433\|Ga0326726_10228459	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1726	Open in IMG/M
3300033433\|Ga0326726_10836060	All Organisms → cellular organisms → Archaea	892	Open in IMG/M
3300033482\|Ga0316627_100066072	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2299	Open in IMG/M
3300033486\|Ga0316624_10131540	Not Available	1831	Open in IMG/M
3300034128\|Ga0370490_0056469	All Organisms → cellular organisms → Archaea	1287	Open in IMG/M
3300034169\|Ga0370480_0085293	Not Available	1091	Open in IMG/M
3300034195\|Ga0370501_0294480	All Organisms → cellular organisms → Archaea	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.58%
Engineered	Engineered	1.61%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.81%
Terrestrial	Environmental → Terrestrial	46.77%
Bioreactor	Engineered → Bioreactor	1.61%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.55%
Soil	Environmental → Terrestrial → Soil	42.74%
Marine	Environmental → Aquatic → Marine	4.84%
Peat	Environmental → Terrestrial → Peat	4.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.61%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.61%
Sediment	Environmental → Aquatic → Sediment	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	35.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.03%
Lake	Environmental → Aquatic → Freshwater → Lake	3.23%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.42%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.61%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.45%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.61%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	17.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.45%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	6.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.65%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	4.84%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.42%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.42%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.42%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.42%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.61%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.61%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.61%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.81%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.81%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005217	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300007910	Microbial communities from sediment of the River Tyne Estuary, UK ? Pasteurized_686d_3	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022554	Dewar_combined assembly	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026486	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04091300	2140918008	Soil	VKTEVYDYFFNEWLKVKDEYAIKKGIHSFSAYITYRLAQLINEDKKNSKE
JGIcombinedJ13530_1039351691	3300001213	Wetland	VKAEIYDYFFNEWLKVREEYTISKGIRSFSAYVTYRLAQLMNDDRKKTKE*
JGIcombinedJ13530_1053097792	3300001213	Wetland	VKTEVYDYFFNEWLKVKEEYAIKKGIHSFSAYVTYRLAQLINEDKKINKEK*
JGIcombinedJ13530_1059383882	3300001213	Wetland	VKAEVYDYFFSEWLKVKEEYAIKKGIRSFSAYVTYRLAQLINEGKKRGEN*
JGIcombinedJ13530_1059487491	3300001213	Wetland	FFNEWLKVKEEYTIKKGIRSFSAYVTYRLSELMSEDKKQRTTK*
JGIcombinedJ13530_1079644472	3300001213	Wetland	VKPEVYDYFFKEWLEVKDEYAIKGGIRSFSAYVTYRLAELIN*
JGI20214J51088_100627264	3300003432	Wetland	VYDYFFKEWLKVKEEYAIKKGIHSFSAYVTATLAQLMNEEKKCNSERDLDRIQRK*
Ga0007798_100642802	3300004775	Freshwater	VKAEVYDYFFREWLSVKEEYAIKRGIRSFSAYVTCRLAELINEDKKHNNKNNHP*
Ga0007800_100207482	3300004776	Freshwater	VKAEVYDYFFKEWLKVKDEYAIKRGIRSFSAYVTYRLAELINEDKKRSEKH*
Ga0069005_100595101	3300005217	Natural And Restored Wetlands	KAEVYDYFFKEWLKVKEEYAIRKGIHSFSAYVTSTLAQLMDEEKKFMSERNSDKTYDK*
Ga0079037_1012174803	3300006224	Freshwater Wetlands	VKTEVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYRLSELITEDKKHSKKESA*
Ga0075520_10585192	3300006795	Arctic Peat Soil	VKTEVYDYFFTEWLKVKDDYAIKKGIHSFSAYITYRLAQLINEDKKNSKE*
Ga0075528_100784461	3300006949	Arctic Peat Soil	VKTEVYDYLFKEWLKVKDEYAIKKGIHSFSAYITYRLAQLITDDKKVAKE*
Ga0073932_10194516	3300007072	Hot Spring Sediment	VKAEVYDYFFKEWLKVKEEYTIKKGIRSFSAYVTYRLAELITQDKRVKQK*
Ga0111549_10720061	3300007910	Sediment	KGYKSITVKAEVYDYFYRDWLKVKSEYTITKGIRSFSAYITYRLAQLIKDDKKPA*
Ga0105095_100239633	3300009053	Freshwater Sediment	VKAEVYDYFFNQWLKVKDEYAIKKGIHSFSAYITCRLAQLIGEDKKSSKE*
Ga0105095_104434471	3300009053	Freshwater Sediment	AEVYDYFFKEWLKVKEEYTIKKGIHSFSAYVTYNLAQLMNEEKKNNSGKKP*
Ga0105106_106000452	3300009078	Freshwater Sediment	VYDYFFKEWLKVKEEYTIKKGIHSFSAFVTYNLAQLMNEEKKSKSEHKPS*
Ga0105103_103247401	3300009085	Freshwater Sediment	VKTEVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYRLSELITEDKKHPTKESA*
Ga0115027_109159262	3300009131	Wetland	VKTEVYDYFFNQWLKVKGEYAIKKGIRSFSAYITYRLSELITEDKKHSKKESA*
Ga0105091_102643461	3300009146	Freshwater Sediment	EVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYRLSELITEDKKHSTKESA*
Ga0105104_105127332	3300009168	Freshwater Sediment	VKTEVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYRLSELITEDKKHSTKESA*
Ga0115028_103288102	3300009179	Wetland	VKTEVYDYFFNQWLKVKGEYAIKKGIRSFSAYITYRLSELITEDKKHSKK*
Ga0114951_1000029251	3300009502	Freshwater	VKAEVYDYFFNEWLKVKDEYAIKRGIRSFSAYICYVLVQLMEEEKKSDKKTKSR*
Ga0116118_11285841	3300009637	Peatland	VKTEVYDYFFGEWLKIKEEYAIKKGIRSFSGFVTYRLAQLMAEEKKHASERKPP*
Ga0116122_10132903	3300009639	Peatland	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMDEEKKCNTKKDRIQA*
Ga0116122_11234011	3300009639	Peatland	TVKAEVYDYFFNEWLKIREEYAIKKGIHSFSAYVTYTLAQLMNEEKKHNKEHKPR*
Ga0116126_12533561	3300009640	Peatland	ITVKAEVYDYFFNEWIKVKEEYAIKKGIHSFSAYITYTLAQLMDKENKSKSRT*
Ga0116110_10841001	3300009643	Peatland	VKAEVYDYFFSEWLKVKDEYTIKRGIRSFSAYVTYRLAQLVSEEKKHENKNKPS*
Ga0116121_13034111	3300009644	Peatland	VKAEVYDYFFNEWIKVKEEYAIKNGIRSFSGYVTFTLAQLMEKEKQKRT*
Ga0116106_12057512	3300009645	Peatland	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMDEEKKCNTKKIEFKHEK*
Ga0116134_11223971	3300009764	Peatland	VYDYFFNEWIKVKEEYAIKNGIRSFSGYVTFTLAQLMEKEKQKRT*
Ga0074046_100422171	3300010339	Bog Forest Soil	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAHLTDEEKKCNTKKDRIQT*
Ga0074045_101746484	3300010341	Bog Forest Soil	VYDYFFNEWLKVKEEYAIKKGIHSFSAYITYTLSQLMNEEKNPNSKDKPR*
Ga0074045_102585801	3300010341	Bog Forest Soil	EWLKVKDEYVIKKGIRSFSAYVTYRLSDLISKDKKCNEKNKPA*
Ga0153915_131114411	3300012931	Freshwater Wetlands	PGYKSITVKPEIYDHFFNEWLKVKDQYTINKGIRSFSAYVTYRLAQLMKDDVK*
Ga0153916_113947861	3300012964	Freshwater Wetlands	VKAEIYDHFFNEWLKVKEQYTIEKGIRSFSAYVTYRLAQLMNGDRKRQKE*
Ga0153916_126287931	3300012964	Freshwater Wetlands	VKAEIYDYFFTEWLKVKEQYTIEKGIRSFSAYVTYRLAQLMNDDKKRQKE*
Ga0182019_105741752	3300014498	Fen	VKTEVYDYFFTEWLKIKDEYAIKKGIHSFSAYITYRLAQLINEDKKHTKE*
Ga0182021_100009837	3300014502	Fen	VKTEVYDYLFKQWLKVKDEYAIKKGIHSFSAYITYRLAQLINDDKKVAKE*
Ga0182021_1001596512	3300014502	Fen	DHFYNEWLKVKEEYTIKKGIRSFSAYITYRLAQLMSEEKNQDK*
Ga0182021_100382564	3300014502	Fen	VYDYFFNEWLKVKDDYAIKKGIHSFSAYITYRLAQLINEDKKSA*
Ga0182021_100452901	3300014502	Fen	TLKCEIYDHFYNEWLKVKEEYTIKKGIRSFSAYITYRLAQLMDEEKKQA*
Ga0182021_100474014	3300014502	Fen	VYDYFFNEWLEVKEEYAIKKGIHSFSAYVTYILAQLINEEKKRKNEK*
Ga0182021_107286721	3300014502	Fen	AEVYDYFFKEWLKVKEEYAIKKGIHSFSAYVTYQLSQLMNEDKKQNNKL*
Ga0182021_110463021	3300014502	Fen	VKADVYDYFFKEWLKVKEDYAIKRGIHSFSAYITYTLAQLVNEEKKNIEKKPP*
Ga0187856_10233904	3300017925	Peatland	VYDYFFNEWIKVKEEYAIKKGIHSFSAYITYTLAQLMDKENKSKSRT
Ga0187856_10898561	3300017925	Peatland	DYFFKEWLKVKDEYAIKKGIHSFSAYITYILAQLMNEEKKRNSEHKPR
Ga0187856_11106272	3300017925	Peatland	VYDYFFNEWIKVKEEYAIKKGIHSFSAYITYTLAQLMEEENKSGHKPH
Ga0187848_100315752	3300017935	Peatland	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMDEEKKCNTKKIEFKHEK
Ga0187879_108778692	3300017946	Peatland	KAEVYDYFFKEWLKVKDEYAIKKGIRSFSAYVCYTLSQLMNEKNENKKS
Ga0187785_102834802	3300017947	Tropical Peatland	IYDHFYNEWLKVKDDYVIRKGIRSFSAYVTYRLAELINQDKKTK
Ga0187779_103425252	3300017959	Tropical Peatland	VYDYFFKEWLKVKDEYTIRKGIHSFSAYITSTLAELMNEEKNCKK
Ga0187779_106903692	3300017959	Tropical Peatland	AEVYDYFFNEWLKVKNEYTIRKGIRSFSAYVTFRLSELMNDDKRTSGKQKE
Ga0187778_103313571	3300017961	Tropical Peatland	VKAEVYDYFFSEWLKVKDEYAIRKGIHSFSAYITYTLAQLMEEEKKGKSEHKPF
Ga0187780_109917161	3300017973	Tropical Peatland	VKSEVYDYFYSEWLKVKEEYAIKKGIRSFSAYVTFRLAQLMAQDKKQVGGRKSP
Ga0187777_102559073	3300017974	Tropical Peatland	VYDYFFKEWLKVKDEYTIRKGIHSFSAYITSTLAELMNEEKNCKKIKKHG
Ga0187782_100775223	3300017975	Tropical Peatland	VYDYFFNEWIKVKEEYAIKKGIHSFSAYITYTLAQLMDKENKSKGEHN
Ga0187816_104380562	3300017995	Freshwater Sediment	VYDYFFNEWLKVKEEYAIKKGIHSFSAYVTYLLAELINE
Ga0187891_10676162	3300017996	Peatland	VYDYFFDEWTKVKEEYAIKKGIHSFSAYVTYTLAQLMEEEKQKRT
Ga0187891_11582452	3300017996	Peatland	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMDEEKKCNTKKDRIQA
Ga0187891_12569971	3300017996	Peatland	SITVKVEVYDYFFNEWLKVKEEYAIKKGIHSFSAYITYTLAQLMDEEKKCQSGR
Ga0187873_11195961	3300018013	Peatland	DYFFNEWLKVREEYAIKKGIHSFSAYVTYLLAQLINEDKKRKSEHKPC
Ga0187860_10539073	3300018014	Peatland	VYAYFFKEWLKVKEECSIKKGIHSFSAYVTYILAQLMDEEKKCNTKKIEFKHEK
Ga0187860_10789201	3300018014	Peatland	VYDYFFDEWTKVKEEYAIKKGIHSFSAYITYLLAELISEEKKRSNEHKP
Ga0187880_100019224	3300018016	Peatland	VKTEVYDYFFGEWLKIKEEYAIKKGIRSFSGFVTYRLAQLMAEEKKHASERKPP
Ga0187880_10059878	3300018016	Peatland	VKAEVYDYFFSEWLKVKDEYTIKRGIRSFSAYVTYRLAQLVSEEKKHENKNKPS
Ga0187880_14874421	3300018016	Peatland	YFFNEWLKVKDEYAIKKGIRSFSAYVTYLLAELVSEGKKRKSENKPF
Ga0187872_101250741	3300018017	Peatland	ADVYDYFFNEWLKVKEEYAIKRGIHSFSAYITYTLAQLIIEEKKRKSEK
Ga0187889_100837252	3300018023	Peatland	VYDYFFKEWLKVKEEYAIKKGIHSFSAYVTSTLAELMNEEKKFRKERNSDKNKKT
Ga0187867_103484583	3300018033	Peatland	VKAEVYGYFFSEWLKVKEEYAIQKGIRSFSAYVTYRLAQLMAEDKKRIK
Ga0187867_104407351	3300018033	Peatland	DHFFKEWLRVKEEYAIEKGIRSFSAYVTYLLAQRINEEKKRSSEHKPG
Ga0187875_106614191	3300018035	Peatland	VKAEVYGYFFSEWLKVKEEYAIQKGIRSFSAYVTYRLAQLIDQETKKR
Ga0187883_102559153	3300018037	Peatland	VKAEVYDYFFKEWLKVKEEYAIKKGIHSFSAYVTYLLAELINDEKKRNNEHKPR
Ga0187887_108642092	3300018043	Peatland	VKAEVYDYFFKEWLKVKEEYAIKKGIHSFSAYITYTLAQLMEEEKKCIGERKSLREP
Ga0187858_100171237	3300018057	Peatland	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMDEEKKCTGERKPR
Ga0187784_101451563	3300018062	Tropical Peatland	GEWLKVREEYIIKKGIRSFSAYVTYRLAQLIAEEKKLAAKRKPS
Ga0187784_102266933	3300018062	Tropical Peatland	AEVYDYFYSEWLKVREEYTIKKGIRSFSAYVTYRLAQLMAEDKKLAAKRKPP
Ga0187784_106550342	3300018062	Tropical Peatland	VKAEVYDYFYGEWLKVREEYIIKKGIRSFSAYVTYRLAQLMAEDKKLAGKRKPL
Ga0187772_101685182	3300018085	Tropical Peatland	VKTEVYDYFYSEWLKVKEKYAIEKGIRSFSAYVTFRLAQIMTQDKKKAGEGKPL
Ga0187772_111680782	3300018085	Tropical Peatland	TVKADIYDYFFSEWLKVKDEYAIKKGIRSFSAYVTYRLAQLVAEDKERLNKK
Ga0187772_112773142	3300018085	Tropical Peatland	SEWLKVKEEYTTKKGIRSFSAYVTFQLSQLMTQHKKHDDERKTP
Ga0187769_100064962	3300018086	Tropical Peatland	VKSEVYDYFYSEWLKVKEEYAIEKGIRSFSAYVTFRLAQLMAQDKKLAGERKSL
Ga0187769_100633492	3300018086	Tropical Peatland	VKADVYDYFFKEWLRVKEEYAIEKGIRSFSAYITYRLSHLEIEDKKKENSKAP
Ga0187769_113196141	3300018086	Tropical Peatland	KAEVYDYFFREWLKVKEEYAIKKGIRSFSAYVCYTLSQLMNEEKKNKKKKS
Ga0187769_115480012	3300018086	Tropical Peatland	VKAEVYDYFFNEWLKIKEEYAIKKGIHSFSAYVTYTLAQLMNEEKKRKSENKQR
Ga0187771_100294516	3300018088	Tropical Peatland	VYDYFFNEWIKVKEEYAIKKGIHSFSAYITYILAQLMDKENKSKRPT
Ga0187771_103432182	3300018088	Tropical Peatland	VKSEVYDYFYSEWLKVKEEYAIKKGIRSFSAYVTFRLAQLMAQDKKQVGGRKST
Ga0187771_106173081	3300018088	Tropical Peatland	TVKAEIYDYFFREWLKVKEEYAIKKGIRSFSAYVCYTLSQLMNEEKKSKKKKA
Ga0187771_116381672	3300018088	Tropical Peatland	YDYFYGEWLKVREEYAIKKGIRSFSAYVTYRLAQLMAEDKKTGP
Ga0187770_116021361	3300018090	Tropical Peatland	VYDYFFNEWLKIKEEYAIEKGIHSFSAYVTYTLAQLMNEEKKRKSENKPP
Ga0214088_19870112	3300020814	Granular Sludge	VKAEVYDYFFKEWLKVKEEYTIKKGIRSFSAYVTYRLAELLTQDKKPKQKD
Ga0212124_103462641	3300022553	Freshwater	VKTEVYDYFFKEWLKVKEEYAINKGIRSFSAYVTYRLAQLINEDKKCSKE
Ga0212093_10304972	3300022554	Hot Spring Sediment	VKAEVYDYFFKEWLKVKEEYTIKKGIRSFSAYVTYRLAELITQDKRVKQK
Ga0212088_10000087141	3300022555	Freshwater Lake Hypolimnion	VKAEVYDYFFNEWLKVKDEYAIKRGIRSFSAYICYVLVQLMEEEKKSDKKTKSR
Ga0209431_107144441	3300025313	Soil	TITVKAHIYDYFFSEWLKVKDQYASEKGIRSFSAFVNCRLAELIKDEPENKTR
Ga0209385_11177322	3300025650	Arctic Peat Soil	VKTEVYDYFFTEWLKVKDDYAIKKGIHSFSAYITYRLAQLINEDKKNSKE
Ga0209124_103584471	3300025852	Arctic Peat Soil	VKTEVYDYLFTEWLKVKDEYAIKKGINSFSAYITYRLAQLI
Ga0209226_102249512	3300025865	Arctic Peat Soil	VKTEVYDYLFTEWLKVKDEYAIKKGINSFSAYITYRLAQLINEDKKNYKE
Ga0209585_1000158413	3300025891	Arctic Peat Soil	YDYFFNEWLRVKDEYTIKKGIQSFSAFVTCRLAQLIIEDKMNENKNKSVKTDS
Ga0209585_100057581	3300025891	Arctic Peat Soil	ITLKTEVYDYLFKEWLKVKDDYAIKKGIHSFSAYITYRLAQLITDDKKSR
Ga0256820_10008045	3300026486	Sediment	VKAEVYDFFFNEWLKVKEEYAINKGIHSFSAFVTYRLAELINEEKRLKE
Ga0209288_103290591	3300027762	Freshwater Sediment	VYDYFFKEWLKVKEEYTIKKGIHSFSAFVTYNLAQLMNEEKKCENE
Ga0209496_102673193	3300027890	Wetland	VKTEVYDYFFNQWLKVKGEYAIKKGIRSFSAYITYRLSELITEDKKHSKK
Ga0209777_104929042	3300027896	Freshwater Lake Sediment	VKTEVYDYFFTEWLKVKDEYAIKKSIHSFSAYITYRLAQFINEDKKGIKE
Ga0209705_104955001	3300027979	Freshwater Sediment	VYDYFFKEWLKVKEEYTIKKGIHSFSAFVTYNLAQLMNEEKKSKSEHKPS
Ga0311022_104040963	3300029799	Anaerobic Digester Digestate	VKAEVYDYFFKEWLKVKEEYTIKKGIRSFSAYVTYRLAELLTQDKKPKQKINPSPELHL
Ga0311333_104912732	3300030114	Fen	VYDYFFNEWLKVKDDYAIKKGIHSFSAYITYRLAQLINDDKKVAKE
Ga0302323_1005110471	3300031232	Fen	YKSITVKTEVYDYFFNEWLKVKDDYAIKKGIHSFSAYITYRLAQLINEDKKSA
Ga0265316_107078692	3300031344	Rhizosphere	VYDYFFKEWLKVKEEYAIKKGIHSFSAYVTYQLSQLINEDKKHKDKT
Ga0315268_116054692	3300032173	Sediment	VKAEIYDYFFNEWLKVKEEYTIKKGIRSFSAYVTYRLSELMSEDKNRSQPQ
Ga0335079_113968561	3300032783	Soil	SITVKAEVYDYFFKEWLKVKEEYAIKKGIHSFSAYVTYCLSQLMNDDKKCNSKHKPS
Ga0335078_1002907610	3300032805	Soil	VYAYFFKEWLKVKEEYSIKKGIHSFSAYVTYILAQLMAEEKKCNTKKDRVQA
Ga0335070_111415962	3300032829	Soil	DYFYGEWIKVKEEYAIKKGIRSFSAYVTFRLVQLMTQDKKQPGEHKPP
Ga0335070_116760891	3300032829	Soil	YDYFFSEWLKVKDEYAIKKGIHSFSAYVTYSLAQLMNEDKNRDNRNKIG
Ga0326727_111900242	3300033405	Peat Soil	LFKEWLKVKEEYAIKKGINSFSAYITYLLAQLINKDEKPANENKPPKAHSLK
Ga0316601_1007388832	3300033419	Soil	VKTEVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYLLSELITEDKKHSKKESAKSLQL
Ga0326726_102284592	3300033433	Peat Soil	VKTEVYDYFFKEWLKVKQEYAIKKGIHSFSGYITYTLSNLINEEKKNISGKKA
Ga0326726_108360602	3300033433	Peat Soil	VKTEVYDYLFKEWLKVKDEYAIKKGIHSFSAYITYRLAQLINDDKEAAKE
Ga0316627_1000660723	3300033482	Soil	VKTEVYDYFFNQWLKVKEEYAIKKGIRSFSAYITYRLSELITEDKKHSKKESA
Ga0316624_101315401	3300033486	Soil	VKAEIYDYFFTEWLKVKEQYTIEKGIRSFSAYVTYRLAQLMNDDKKRQKE
Ga0370490_0056469_719_880	3300034128	Untreated Peat Soil	VKTEVYDYFFNQWLKVKDEYAIKKGIRSFSAYVSYRLSELITEDKKHSKKDSV
Ga0370480_0085293_938_1090	3300034169	Untreated Peat Soil	VKTEVYDYLFKEWLKVKDEYAIKKGIHSFSAYITYRLAQLITDDKKVAKE
Ga0370501_0294480_3_170	3300034195	Untreated Peat Soil	KGYKSITVKTEVYDYFFNEWLKVKDDYAIKKGIHSFSAYITYRLAQLINEDKKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068993

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences