Metagenome / Metatranscriptome Family F068997

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068997
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	74 residues
Representative Sequence	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKK
Number of Associated Samples	86
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.67 %
% of genes near scaffold ends (potentially truncated)	95.16 %
% of genes from short scaffolds (< 2000 bps)	90.32 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.806 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.097 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.70% β-sheet: 0.00% Coil/Unstructured: 43.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01212	Beta_elim_lyase	4.03
PF13432	TPR_16	2.42
PF02954	HTH_8	2.42
PF00753	Lactamase_B	1.61
PF00072	Response_reg	0.81
PF13426	PAS_9	0.81
PF13336	AcetylCoA_hyd_C	0.81
PF00440	TetR_N	0.81
PF01837	HcyBio	0.81
PF04193	PQ-loop	0.81
PF12728	HTH_17	0.81
PF02806	Alpha-amylase_C	0.81
PF11453	DUF2950	0.81
PF09720	Unstab_antitox	0.81
PF13683	rve_3	0.81
PF04366	Ysc84	0.81
PF11399	DUF3192	0.81
PF02899	Phage_int_SAM_1	0.81
PF00689	Cation_ATPase_C	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	8.06
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	4.03
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	4.03
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	4.03
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	4.03
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	4.03
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	4.03
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	4.03
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	4.03
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	4.03
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	4.03
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	4.03
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	4.03
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	4.03
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	4.03
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	4.03
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	4.03
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.81
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.81
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.81
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.81
COG1900	Sulfur incorporation enzyme MA1821 (anaerobic homocysteine biosynthesis), HcyBio/DUF39 family	Amino acid transport and metabolism [E]	0.81
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.81
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.81
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.61 %
Unclassified	root	N/A	48.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.61 %
Unclassified	root	N/A	48.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.81 %
Unclassified	root	N/A	48.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.35 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.61 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	16.13 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.81 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.13 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.61 %
unclassified Thermoplasmata	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	10.48 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.61 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.61 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.81 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.81 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
unclassified Syntrophobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales	8.87 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	1.61 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.81 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.81 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.81 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.81 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	8.87 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1.61 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.81 %
Fundidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio	0.81 %
Desulfobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium	0.81 %
Desulfomonile	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile	0.81 %
Desulforhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus	0.81 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	8.87 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1.61 %
unclassified Fundidesulfovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio	0.81 %
unclassified Desulforhabdus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus	0.81 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → environmental samples	0.81 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.81 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.39 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	8.87 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1.61 %
Fundidesulfovibrio sp. SG106	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio → Fundidesulfovibrio sp. SG106	0.81 %
Desulforhabdus sp. TSK	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus → Desulforhabdus sp. TSK	0.81 %
uncultured Desulfobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → environmental samples → uncultured Desulfobacterium sp.	0.81 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.81 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.81 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	0.81 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.81 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.81 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000124\|BS_KBA_SWE12_21mDRAFT_c10061703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	978	Open in IMG/M
3300000311\|WSSedA1Ba3DRAFT_1013647	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300001213\|JGIcombinedJ13530_101159039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	503	Open in IMG/M
3300001213\|JGIcombinedJ13530_109176903	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300003541\|JGI20214J51650_10911304	Not Available	614	Open in IMG/M
3300003852\|Ga0031655_10221486	Not Available	716	Open in IMG/M
3300006224\|Ga0079037_100490935	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300006224\|Ga0079037_100670838	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300006224\|Ga0079037_101769458	Not Available	617	Open in IMG/M
3300009053\|Ga0105095_10448219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	714	Open in IMG/M
3300009087\|Ga0105107_10688304	Not Available	711	Open in IMG/M
3300009091\|Ga0102851_10780090	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1020	Open in IMG/M
3300009091\|Ga0102851_12366918	Not Available	606	Open in IMG/M
3300009111\|Ga0115026_11377023	Not Available	582	Open in IMG/M
3300009166\|Ga0105100_10490968	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300009167\|Ga0113563_10295867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	1676	Open in IMG/M
3300009167\|Ga0113563_10893798	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300009167\|Ga0113563_12501570	Not Available	623	Open in IMG/M
3300009167\|Ga0113563_13160425	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009171\|Ga0105101_10034598	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300009519\|Ga0116108_1023416	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M
3300012931\|Ga0153915_10922741	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	1015	Open in IMG/M
3300012931\|Ga0153915_11454724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_43_11	801	Open in IMG/M
3300012931\|Ga0153915_11522819	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300012931\|Ga0153915_11711084	Not Available	736	Open in IMG/M
3300012931\|Ga0153915_12474793	Not Available	607	Open in IMG/M
3300012931\|Ga0153915_12661447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	585	Open in IMG/M
3300012964\|Ga0153916_11691479	Not Available	706	Open in IMG/M
3300012964\|Ga0153916_11776790	Not Available	689	Open in IMG/M
3300012964\|Ga0153916_12060101	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	640	Open in IMG/M
3300012964\|Ga0153916_12123812	Not Available	631	Open in IMG/M
3300012964\|Ga0153916_12350065	Not Available	600	Open in IMG/M
3300012964\|Ga0153916_12507134	Not Available	581	Open in IMG/M
3300013080\|Ga0153913_1517211	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300014151\|Ga0181539_1091867	Not Available	1298	Open in IMG/M
3300014155\|Ga0181524_10399916	Not Available	600	Open in IMG/M
3300014321\|Ga0075353_1162405	Not Available	572	Open in IMG/M
3300014323\|Ga0075356_1234840	Not Available	508	Open in IMG/M
3300015253\|Ga0180081_1036759	Not Available	802	Open in IMG/M
3300017929\|Ga0187849_1332919	Not Available	563	Open in IMG/M
3300017939\|Ga0187775_10128378	Not Available	882	Open in IMG/M
3300017947\|Ga0187785_10470579	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300017966\|Ga0187776_10246033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Fundidesulfovibrio → unclassified Fundidesulfovibrio → Fundidesulfovibrio sp. SG106	1142	Open in IMG/M
3300018004\|Ga0187865_1046689	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300018009\|Ga0187884_10119569	Not Available	1131	Open in IMG/M
3300018015\|Ga0187866_1086904	Not Available	1318	Open in IMG/M
3300018019\|Ga0187874_10214522	Not Available	797	Open in IMG/M
3300018021\|Ga0187882_1385760	Not Available	532	Open in IMG/M
3300018023\|Ga0187889_10176958	Not Available	995	Open in IMG/M
3300018024\|Ga0187881_10057722	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300018029\|Ga0187787_10406056	Not Available	538	Open in IMG/M
3300018030\|Ga0187869_10114900	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300018055\|Ga0184616_10358996	Not Available	548	Open in IMG/M
3300018089\|Ga0187774_10237543	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300018089\|Ga0187774_10607986	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300019212\|Ga0180106_1277775	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300020048\|Ga0207193_1743631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	641	Open in IMG/M
3300022385\|Ga0210376_1094957	Not Available	524	Open in IMG/M
3300022653\|Ga0236337_1188389	Not Available	650	Open in IMG/M
3300024056\|Ga0124853_1311874	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300025948\|Ga0210088_1082757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	521	Open in IMG/M
3300025963\|Ga0210146_1045662	Not Available	502	Open in IMG/M
3300027713\|Ga0209286_1085240	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300027726\|Ga0209285_10053896	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300027739\|Ga0209575_10141695	Not Available	867	Open in IMG/M
3300027740\|Ga0214474_1318458	Not Available	548	Open in IMG/M
3300027740\|Ga0214474_1361662	Not Available	507	Open in IMG/M
3300027890\|Ga0209496_10251989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	865	Open in IMG/M
3300027896\|Ga0209777_10404484	Not Available	1026	Open in IMG/M
3300027897\|Ga0209254_10485302	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300027900\|Ga0209253_11188474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	512	Open in IMG/M
3300027902\|Ga0209048_10145588	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1772	Open in IMG/M
3300027979\|Ga0209705_10045198	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300030613\|Ga0299915_10003523	All Organisms → cellular organisms → Bacteria	11318	Open in IMG/M
3300031255\|Ga0315554_1096895	Not Available	1095	Open in IMG/M
3300031360\|Ga0307444_1190386	Not Available	606	Open in IMG/M
3300031551\|Ga0315548_1039478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2316	Open in IMG/M
3300031949\|Ga0214473_11191770	Not Available	789	Open in IMG/M
3300031949\|Ga0214473_12198823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	532	Open in IMG/M
3300032069\|Ga0315282_10504692	Not Available	685	Open in IMG/M
3300032118\|Ga0315277_11232520	Not Available	661	Open in IMG/M
3300032156\|Ga0315295_10693903	Not Available	1027	Open in IMG/M
3300032163\|Ga0315281_11724033	Not Available	607	Open in IMG/M
3300032782\|Ga0335082_11432429	Not Available	561	Open in IMG/M
3300032829\|Ga0335070_10086876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3310	Open in IMG/M
3300032829\|Ga0335070_10345051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulforhabdus → unclassified Desulforhabdus → Desulforhabdus sp. TSK	1434	Open in IMG/M
3300032897\|Ga0335071_11676573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	580	Open in IMG/M
3300033004\|Ga0335084_11926655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	577	Open in IMG/M
3300033413\|Ga0316603_12332037	Not Available	504	Open in IMG/M
3300033414\|Ga0316619_10414504	Not Available	1072	Open in IMG/M
3300033414\|Ga0316619_10714308	Not Available	847	Open in IMG/M
3300033414\|Ga0316619_12113373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	514	Open in IMG/M
3300033419\|Ga0316601_100435567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1243	Open in IMG/M
3300033433\|Ga0326726_10326690	Not Available	1444	Open in IMG/M
3300033433\|Ga0326726_10429375	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300033480\|Ga0316620_10638025	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300033480\|Ga0316620_10648940	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300033480\|Ga0316620_11674364	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300033481\|Ga0316600_10216523	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300033482\|Ga0316627_101499000	Not Available	682	Open in IMG/M
3300033485\|Ga0316626_10006074	All Organisms → cellular organisms → Bacteria	6417	Open in IMG/M
3300033485\|Ga0316626_11029105	Not Available	731	Open in IMG/M
3300033485\|Ga0316626_11255075	Not Available	663	Open in IMG/M
3300033486\|Ga0316624_10225359	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300033487\|Ga0316630_10336374	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300033487\|Ga0316630_11769662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	563	Open in IMG/M
3300033487\|Ga0316630_11879813	Not Available	548	Open in IMG/M
3300033488\|Ga0316621_10045340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	2162	Open in IMG/M
3300033489\|Ga0299912_10794869	Not Available	724	Open in IMG/M
3300033489\|Ga0299912_11103352	Not Available	584	Open in IMG/M
3300033493\|Ga0316631_10056925	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300033513\|Ga0316628_100946921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300033513\|Ga0316628_101038953	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300033513\|Ga0316628_101443609	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300033513\|Ga0316628_102618622	Not Available	665	Open in IMG/M
3300033513\|Ga0316628_103099640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → environmental samples → uncultured Desulfobacterium sp.	606	Open in IMG/M
3300033521\|Ga0316616_101114773	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300033521\|Ga0316616_102834266	Not Available	653	Open in IMG/M
3300034083\|Ga0373901_011979	Not Available	1450	Open in IMG/M
3300034100\|Ga0373910_0097498	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.58%
Engineered	Engineered	2.42%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.87%
Terrestrial	Environmental → Terrestrial	38.71%
Bioremediation	Engineered → Bioremediation	2.42%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.39%
Soil	Environmental → Terrestrial → Soil	37.10%
Marine	Environmental → Aquatic → Marine	8.87%
Metal	Engineered → Bioremediation → Metal	2.42%
Sediment	Environmental → Aquatic → Sediment	1.61%
Peat	Environmental → Terrestrial → Peat	1.61%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	31.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.06%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.84%
Lake	Environmental → Aquatic → Freshwater → Lake	4.84%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.23%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.61%
Pond	Environmental → Aquatic → Freshwater → Pond	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	31.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	20.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.06%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.84%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.03%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.03%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.42%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.81%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	25.00%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	8.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.65%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.84%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.23%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.23%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.42%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.61%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.81%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.81%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025948	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027739	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031551	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034081	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.3	Engineered	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M
3300034100	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BS_KBA_SWE12_21mDRAFT_100617033	3300000124	Marine	MTKIVFSVLSMLIITSLAADAPAVYAQRSPADFAGEPDKTMATAHESFVKKDMGKAADQIGKAAD
WSSedA1Ba3DRAFT_10136472	3300000311	Wetland	MTKKVFSVLSMLIITSLVAGIPAVYAQTSSADFTSEPDKTMAAAHESFVKKNMNKAAEQISKAADYVKKEADKVATNAKRA*
JGIcombinedJ13530_1011590391	3300001213	Wetland	MKKNAVSTLCMLIVISLISGIQAVYAQTSPSDFSGEPDKTMAAAHESFVKKDMNKAAEQIGKAADYVK
JGIcombinedJ13530_1091769031	3300001213	Wetland	MTKKCISILSVLIITSLVAGIPAIYAQTSPADFPSEPDKTMAAAHESFVKKDMHKAAEQIGKAADYVKKEAG
JGI20214J51650_109113042	3300003541	Wetland	MTKKVFSVLSMLIITSLVAGIPAVYAQTSSADFTSEPDKTMAAAHESFVKKNMNKAAEQISKAADYVK
Ga0031655_102214861	3300003852	Freshwater Lake Sediment	MNKKSFSVLSMLIIATLMAAIPAVYAQTSRGDFTNELDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEVDKVAKDTKEGVKKA
Ga0031655_103247761	3300003852	Freshwater Lake Sediment	MTKKYFSVLSMLIVAVLMAAIPAVYAQTSPGDITDEPDKNMAKAHESFVKGDINKAAEYIHKA
Ga0079037_1004909353	3300006224	Freshwater Wetlands	MLIIAAWMAAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGEMDKAAEQINKAAAYVKKE
Ga0079037_1006708383	3300006224	Freshwater Wetlands	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSPSDFTNEPDRTMASAHESFLKGEMNKAAEQIHKAAAYVKKEADKVAK
Ga0079037_1017694581	3300006224	Freshwater Wetlands	MNKRSYSVLSMLIIAAWIVAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKEGVKK
Ga0105095_104482192	3300009053	Freshwater Sediment	MNKKSFSVLSMVIIAVLMVAIPAVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAVEYIHKAAAYVKKEADEVAKDTKEGVKKAGDDLTKLGQ
Ga0105107_106883041	3300009087	Freshwater Sediment	MKKKSFSVLSMLIIVVLMAAISAVYAQTSPGDFTNEPDKTMASAHESFLKGKMNKAAEQINKAAAYVKKEADEVAKDTK
Ga0102851_107800902	3300009091	Freshwater Wetlands	MVATLIAALPVVYAQTSSGDFREEPDKTMAAAHESFIKKDMNKAAEQIHKAAAYVK
Ga0102851_123669182	3300009091	Freshwater Wetlands	MNRKSFSVLSMLIIAALMAVIPAVYAQTSRGEFTNEPDKTMASAHESFLKGEMNKAAEQINKAAVYVKKEADKVAKEAREDVKKAADDLDKL
Ga0115026_113770231	3300009111	Wetland	MNKSAFSVLSIFIIAAWMAATPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKE
Ga0105100_104909681	3300009166	Freshwater Sediment	MVIIAVLMAAISVVYAQTSPGDFTNEPDKTMADAHESFLKGEMNKAADQINKAAAYVKKEADKVAKDTQ
Ga0113563_102958671	3300009167	Freshwater Wetlands	MAKKVLSALSLLPITSLVAGIPAVYAQSSPADFSGEPDKTMAAAHESFVKKDMKKA
Ga0113563_108937982	3300009167	Freshwater Wetlands	MNKKSFSVLSMLIIAVLMAAIAAVYAQTSPGDFTNEPNKTMASAHESFLKGERNKAAEQINKAAAYMKKEADKVAKDTKEGVKKAGD
Ga0113563_125015701	3300009167	Freshwater Wetlands	MNKRSYSVLSMLIIAAWIVAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKEGVKKAGD
Ga0113563_131604251	3300009167	Freshwater Wetlands	MNKKSFSVLSMVIIAVLMVAIPVVYAQTSPGDFPNEPDKTMAKAHESFVKGDINKAVEYIHKAAAYVKKEADKVA
Ga0105101_100345981	3300009171	Freshwater Sediment	MNKKSFSVLSMLIIVVLMAAISAVYAQTSPGDFTNEPDKTMASAHESFIKGEMNKAAEQINKAAAYVKK
Ga0116108_10234163	3300009519	Peatland	MTKKYFSVLSMLIVAVLLAAIPAVYAQTSPGDITNEPDKNMAKAHESFVKGDINKAAEYIHKAAAYV
Ga0153915_109227411	3300012931	Freshwater Wetlands	MFIIAVWMVVIPVAYAQTSPGDFTDEPDKTMANAHESFMKKDMKKAAEQIDKAAAYVKKEADKVAQDAKEGVKKAGDELDKL
Ga0153915_114547241	3300012931	Freshwater Wetlands	MTINHTPNEGRNQMTKKYFSVSSMLIIAVLMAAIPAVYAQTSPGDFTDEPDKSMAKAHESFVKKDMNKAAEQIHKAAVYVKKEGDKVA
Ga0153915_115228191	3300012931	Freshwater Wetlands	MNKKTFSVLSMLIIAALMAAISAVYAQTAPGDFTREPDKSMASAHESFLKGEMNKAAEQIRKAAAYVKKEADKVAKDTKE
Ga0153915_117110842	3300012931	Freshwater Wetlands	MTKKYFSVLSMLILAVLMAAIPAVYAQTSPDDFTNEPDKSMAKAHESFVKGDINKAADYIHKAAAYVKKEAD
Ga0153915_124747932	3300012931	Freshwater Wetlands	MNKKSFSVLSMLTIAVLMAAVLAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKK
Ga0153915_126614472	3300012931	Freshwater Wetlands	MNKKSFSVLSMVIIAVLMVAIPAVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAVEYIHKAAAYVKKEADKVAKDTKEG
Ga0153916_116914792	3300012964	Freshwater Wetlands	MNKKTFSVLTMLSIAVLMAAIPAVYAQTSPGDFTNEPDKTMAAAHESFLKGEMNKAAEQINRAAAYVKKEANKVSKDAKEGVKKAGDDL
Ga0153916_117767901	3300012964	Freshwater Wetlands	MNKKSFSVLSMLSIAVLMVAIPAVHAQTSPGDFTNEPDKTMAAAHESFLKGEMNKAAEQINKAAAYVKKEADKV
Ga0153916_120601012	3300012964	Freshwater Wetlands	MFIVAVLMGVISVAYAQTSPGDFTEEPDKTMANAHESFMKKDMKKAAEQIDKAAAYVKKEADKV
Ga0153916_121238122	3300012964	Freshwater Wetlands	MNKKSFSVLSMLSIAVLMVTIPAVYAQTSPGDFTNEPDKTMAAAHESFLKGEMNKAAEQINKAAAYVKKEADKV
Ga0153916_123500652	3300012964	Freshwater Wetlands	MNKKSFSVLNMLIIAALMAAISAVYAQTSSGDFTNEPDKTMVSAHESFLKGEMNKAAEQINKAAAYVKK
Ga0153916_125071342	3300012964	Freshwater Wetlands	MNKKSFSVLSMLTIAVLMAAVLAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEADK
Ga0153916_131062242	3300012964	Freshwater Wetlands	MVKRYFSVLSVLILVVLLTTIPTVYAQTSSGDFTEEPDKSMAKGQESFVKGDKNKAAGYIHD
Ga0153913_15172112	3300013080	Freshwater Wetlands	MNKKSFSVLSMLSIAVLMAAISAFYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKE
Ga0181539_10918672	3300014151	Bog	MIKKYFSVLSMLIITVLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDINKAAEYIHKAAAYV
Ga0181524_103999162	3300014155	Bog	MIKKYFSVLSMLIITVLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVAKDSKEGV
Ga0075353_11624052	3300014321	Natural And Restored Wetlands	MTKKVFSVLSMLIITSLVAGIPTVYAQTSPADFTSEPDKTMAAAHESFVKKDMKKASEQISKAATYVNKEADKVAKDTKEGVK
Ga0075356_12348402	3300014323	Natural And Restored Wetlands	MTKNVFSVLSMLIITSMVAGIPAVYAQTSPADFSSEPDKTMAAAHESFAKKDMNKATEQIGKAADYVRKEA
Ga0180081_10367592	3300015253	Soil	MLIITSLVAGIPAVYAQTSPADFSSEPDKTMAAAHESFVKKNMNKAAEQISKAADYV
Ga0187849_13329191	3300017929	Peatland	MTKKYFSVLSMLIIAVLMAAIPAVYAQTSPGDITHEPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEA
Ga0187775_101283781	3300017939	Tropical Peatland	MTKKAFTFLSVLMITAFMVALPPVYPQTTPGGFTSEPDKTMAAAHESFVKKEMNKSAEQINKAAAYVKKQANQV
Ga0187785_104705792	3300017947	Tropical Peatland	MDKKTYSILSILIMAGFMAAIPMAFAQTSSGDFSNEPDKTMAGAHESFLKGEMNKAADQIDKAAAYVKKE
Ga0187776_102460333	3300017966	Tropical Peatland	MTKKAFTFLSVLMITAFMVALPPVYPQTTPGGFTSEPDKTMAAAHESFVKKDMNKAAEQINKAAAYVKKQA
Ga0187870_10952694	3300017998	Peatland	MNKKSFSVLSLLIIAVLMAAIPAVYAKTPPGDITDKPDKNMAKAHESFVKGDINKAAEYIHKA
Ga0187865_10466895	3300018004	Peatland	MNKKSFSVLSLLIIAVLMAAIPAVYAKTSPGDITDKPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVS
Ga0187884_101195692	3300018009	Peatland	MIKKYFSVLSMLIITVLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDINKAAEYIHKAA
Ga0187866_10869042	3300018015	Peatland	MTRKYLSVLSMLIIAVLMAAIPTAYAQTSPGDITAEPDKNMAKAHESFVKGDMNKAAEYIHKAAAYVKKEADKVAKDTKE
Ga0187874_102145222	3300018019	Peatland	MIKKYFSVLSMLIITVLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVAKD
Ga0187882_13857601	3300018021	Peatland	MNKKSFSVLSLLIIAVLMAAIPAVYAKTSPGDITDKPDKNMAKAHESFVKGDINKAADYIHKAAAYVKKEADKVAK
Ga0187889_101769582	3300018023	Peatland	MIKKYFSVLSMLIITVLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVAKDSKE
Ga0187881_100577226	3300018024	Peatland	MNKKSFSVLSLLIIAVLMAAIPAVYAKTSPGDITDKPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVAK
Ga0187787_104060562	3300018029	Tropical Peatland	MTKKSFSVLTMFSIIVLMAAITTVCAQTTPGGFTDEPDKTMAAANESFIKKEMNKSAEQINKAAAYVKK
Ga0187869_101149001	3300018030	Peatland	MTQKYFSVLSMLIIAVLIVAIPAVYAQTSPGDITDDPDKNMAKAHESFVKGDINKAAEYIHKSAAYVKKEADKVAKDTKEGV
Ga0184616_103589961	3300018055	Groundwater Sediment	MNKKSFSVLSMLILAVLMAAIAAGCAQKSPGDFTNEPDKSMEKAHESFVKGDINKAADYIHKAAAYVKEEADKVAKDA
Ga0187774_102375431	3300018089	Tropical Peatland	MEKKLFAVLSGLIIILLVAIIPVVYAQTSPGGFTDEPDKTMAAAHESFIKKDMNKSAEQINKAAAYV
Ga0187774_106079861	3300018089	Tropical Peatland	MEKKIFSVLSELIITALLVGIPAVYAQTSPADFTGEPDKSMAAAHESFIKKDMNKSAEQINKAAAY
Ga0180106_12777751	3300019212	Groundwater Sediment	MDKKSFSALSMLILAVLMAAIPAVYAQTSPGDFTNEPDKSMASAHESFLKGEMNKAAEQINKAAAYVKKEADKVAKDTKEGVRKVG
Ga0207193_17436311	3300020048	Freshwater Lake Sediment	IQAVRLYQNKKRRIQMTQNVFSVLSMLIITSLVAGIPAVYAQTSPAGFTSEPDKTMAAAHESFVKKNMNKAAEQISKAADYVKKDADKVATNAKEGVXXXXXXXX
Ga0210376_10949572	3300022385	Estuarine	MTKIVLSVLSMLIITSLAADAPAVYAQRSPADFAGEPDKTMAAAHESFVKKDMDNASDQIGKA
Ga0236337_11883891	3300022653	Freshwater	MNKKSFSVLSMLIIATLMAAIPAVYAQTSRGDFTNELDKTMASAHESFLKGEMNKAAEQINKAAAY
Ga0124853_13118742	3300024056	Freshwater Wetlands	MDGCHPAVYSQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKEA
Ga0210088_10827572	3300025948	Natural And Restored Wetlands	MTKKYYSVLITFIIAVLMAAVPVVYAQTSPGGFTDQPDKSMAAAHESFVKKDMNKAADQIGKAADYVKGEAGKV
Ga0210146_10456621	3300025963	Natural And Restored Wetlands	MTKKVFSVLSMLIITSLVAGIPAIYAQTSPADFTSEPDKTMAAAHESFVKKNLNKAAEQISKAADYVKKDADKVATNA
Ga0209286_10852402	3300027713	Freshwater Sediment	MNKKSFSVLSMLILAVLMAAIAAGCAQKSPGDFTNEPDKSMEKAHESFVKGDINKAADYIDKAAAYV
Ga0209285_100538961	3300027726	Freshwater Sediment	MLIIVVLMAAISAVYAQTSPGDFTNEPDKTMASAHESFLKGKMDKAAEQINKAAAYVKKEADEVAKDTKEGVKK
Ga0209575_101416953	3300027739	Freshwater	MTKIVLSVLSMLIITSLAADAPAVYAQRSPANFTGEPDKTMAAANESFVKKD
Ga0214474_13184581	3300027740	Soil	MRHITNERENQMTKKYFSVLSMLVLALLMAAIAAGCAQKSPGDFTNEPDKSMAKGHESFAMGDINKAADYIHKAAAY
Ga0214474_13616622	3300027740	Soil	MNKKSFSILSMLIILAWIAAISTVFAQTSPGGFTNEPDKSMAKAHESFVKGEMNKAAESIAKAATYVKKEADEVAKDTKEGVKKAGDDLTKLGQD
Ga0209496_102519891	3300027890	Wetland	MAKKVLSALSLLPITSLVAGIPAVYAQSSPADFSGEPDKTMAAAHESFVKKDMKKAS
Ga0209777_104044842	3300027896	Freshwater Lake Sediment	MNKKSFSVLSMLIIATLMAAIPAVYAQTSRGDFTNELDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEVDKVAKDTKEG
Ga0209254_104853021	3300027897	Freshwater Lake Sediment	MTQKVFSVLSMLIITSLVAGIPAIYAQTSSADFSSEPDKTMAAAHDSFVKKNMNKAAEQISKAADYVKKDADKVATNAKE
Ga0209253_111884741	3300027900	Freshwater Lake Sediment	MVIIAVLMVAIPAVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAVEYIHKVAAYVKKEADKVAKDTKEG
Ga0209048_101455881	3300027902	Freshwater Lake Sediment	MTKKVFSVLSMLIITSLAAGIPAVYAQTSPADFTSEPDKTMAAAHESFVKKDINKASEQIGKAADYVKKEADKVAKDAKGGVKKAGDELGNVG
Ga0209705_100451982	3300027979	Freshwater Sediment	MNKKSFSVLSMVIIAVLMVAIPVVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAVEYIHKAAAYVKKEADKVAKDT
Ga0299915_1000352315	3300030613	Soil	MNKKSFSVLSMLIIAVLMAAISAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEADKVAKDTKEGVKKA
Ga0315554_10968951	3300031255	Salt Marsh Sediment	MTKKHFSVLSMLVLAVLTAAIAAGCAQKSPGDFTNEPDKSMAKAHESFVKGDINKAADYIHTAAAYVKEEA
Ga0307444_11903861	3300031360	Salt Marsh	MTKKHFSVLSMLVLAVLMAAIATGCAQKSSGDFTNEPDKSMAKAHESFVKGDINKAADYIHTAAAYVK
Ga0315548_10394781	3300031551	Salt Marsh Sediment	MTKKHFSVLSMLVLAVLMAAIATGCAKKSSGDFTNEPDKSMAKAHESFVKGDINKAADYIHTAAAYVKEEADKVA
Ga0214473_111917702	3300031949	Soil	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKK
Ga0214473_121988232	3300031949	Soil	MLIIAALIAAIPTVYAQASPGDLTREPDKTMASAHESYLKGEMNKAAEQINKAAAYVRKEADKVATDTKEGVKKAADDLDKLGEGVKR
Ga0315282_105046922	3300032069	Sediment	MNKKSFSVLSMLIIAALMAAIPEVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEADKVAKDTKEGVKKAGDDLGKLGQG
Ga0315277_112325201	3300032118	Sediment	MTKKYFSVLSMLIIAVLMAAIPAVHAQTSPGDTDEPDKNMAKAHESFVKGDINKAAEYINKAAAYVKKEADKVAK
Ga0315295_106939032	3300032156	Sediment	MTKKVFSVLSMFIITSLVAGIPAVYAQTSPADFTSEPDKTMAAAHESFVKKNMNKAAEQISKAADYVEKDADKVATNAREGVKKA
Ga0315281_117240331	3300032163	Sediment	MTKYFSVLIMCIIAVSMAAIPVVYAQTSPGGFTNEPDKTMAAAHESFVKKDMNKSAEQIKKAADYVKKEADQVAKDSKEGVKKAGEELDKLGEA
Ga0335082_114324292	3300032782	Soil	MAKMAFSVLSMLIVATLLVGTPAVYAQTSPADFTGEPDKSMAAAHESFVKKDMNKAAEQISKAADYVKTEAAKVAK
Ga0335070_100868761	3300032829	Soil	MTKMAFSVLSMLVVTSLVADIPAVYAQTSPTDFAGDPDKTMAAAHESFVKKDMNKAAEQISKAADYVKKEADKVAKDA
Ga0335070_103450513	3300032829	Soil	MTKMASSVLCSLIVASLVAGSPAVYAQTSPADFAGEPDKTMAAAHESFVKKDMNKAAEQ
Ga0335071_116765731	3300032897	Soil	MTKVAFSLLSMLIMSSLLAGIPAVYAQTSPADFTGEPDKTMAAAHESFVKKEMNKAAEQISGASDYVK
Ga0335084_119266551	3300033004	Soil	MTKMASSVLCSLIVASLVAGSPAVYAQTSPADFAGEPDKTMAAAHESFVKKDMNKAAEQISKAADYVKKEADKVAKDASEG
Ga0316603_123320371	3300033413	Soil	MLVIAVLVVAIPAVYGQTSPGDFTSEPDKTMASGHESFLKGEMNKAAEQINKAAAYVKKEVDKVAKDSKEGVKKAADDLD
Ga0316619_104145042	3300033414	Soil	MNRKSFSVLSMLIIAALMAAIPSVYAQTSPGDFTNEPDKTMAAAHESFLKGEMSKAAEQINKAAAYVKKEADKVAKDA
Ga0316619_107143082	3300033414	Soil	MTKKVFSVLSMLIITSLVAGIPAVYAQTSSADFSSEPDKTMAAAHESFVKKNMNKAAEQISKAA
Ga0316619_121133731	3300033414	Soil	MTKKYFSVLSMLIIAVLVATISAVYAQTSPADFTGEPDKTMAAAHESFVKKDMNKAAEQIHKAAVYVKK
Ga0316601_1004355672	3300033419	Soil	MNRKSVSALSMLIIGTLMAVIPTVYAQTPRGDFTNEPDKTMASAHESFLKGEMNKAAEQINKASAYVKKEADKVA
Ga0326726_103266902	3300033433	Peat Soil	MSKKHFSVLSMLIITLLMGAIPAVYAQTSPGNITDEPDKNMAKAHESFVKGDMNKAAEYIHKAAAYVKK
Ga0326726_104293753	3300033433	Peat Soil	MTKKSFSILSMLIILALIATISTVFAQTSPGGFTNEPDKSMAKAHESFVKGEMNKAAKSIAKAATYVKKEAN
Ga0316620_106380251	3300033480	Soil	MTKKYFSVLSMLIIAVLMAAIPAVYAQTSPGDITHEPDKNMAKAHESFVKGDINKAAEYIHKAAAYVKKEADK
Ga0316620_106489403	3300033480	Soil	MTINHTPNEGRNQMTKKYFSVSSMLIIAVLMAAIPAVYAQTSPGDFTDEPDKSMAKAHESFVKKDMNKAAEQIHKAAVYVKKEGDKVAKGTKEGVRKA
Ga0316620_116743641	3300033480	Soil	MNKKSFSVLSMLSIAVLMVTIPAVYAQTSPGDFTNEPDKTMAAAHESFLKGEMNKAAEQINKAAAYVKKE
Ga0316600_102165232	3300033481	Soil	MNKSAFSVLSILIIAAWMAATPAVYAQTSSGDFTNEPDKTMASAHESFLKGEMDKAAEQINKAAA
Ga0316627_1014990002	3300033482	Soil	MAKKVLSALSLLIITSLVAGIPTVYAQTSPSEFPGEPDKTMAAAHESFAKKDMKKASEQ
Ga0316626_100060748	3300033485	Soil	MNKNSFSVLSMLILAVLMAAIAAGCAQKSSGDFTNEPDKSMEKAHESFVKGDINKAADYIHKAAAHVKEEADKVAKDA
Ga0316626_110291052	3300033485	Soil	MNKSAFSVLSIFIIAAWMAATPAVYAQTSSGDFTNEPDKTMASAHESFLKGEMDKAAEQINKAAAYVKKEADKVAKDSK
Ga0316626_112550751	3300033485	Soil	MNKRSYSVLSMLIIAAWIVAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKEGVKKAGDELEKL
Ga0316624_102253591	3300033486	Soil	MTKKYFSVLSMLILAVLMAAIPAVYAQTSPGDITGEPDKNMAKAHESFVKGDINKAAQYIHKAAAYVK
Ga0316630_103363741	3300033487	Soil	MTKKCVLLLSMLMVAALIAALPMVNAQTTPGGFTNEPDKTMAAAHESFIKKDTDKASEQISKAGAYVKKEADKVA
Ga0316630_117696621	3300033487	Soil	MTKKYFSVLSMLIIAVLVATISAVYAQTSPADFTGEPDKTMAAAHESFVKKDMNKAAEQIHKAAVYVKKEADKVAKDSKEGVRKAGEELDKL
Ga0316630_118798131	3300033487	Soil	MLIIAAWMAAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGEMDKAAEQINKAAAYVKKEADKVAKDS
Ga0316621_100453401	3300033488	Soil	MAKKVLSALSLLLITSLVAGIPAVYAQSSPADFSGEPDKTMAAAHESFVKKDMKK
Ga0299912_107948691	3300033489	Soil	MNKKSFSVLSMLIIAVLMAAISAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKE
Ga0299912_111033521	3300033489	Soil	MNKKSFSVLSMLIIAVLMVGTSAVYAQTSPSDFTNEPDKTMAAAHESFLKGEMNKAAEQINKAAAYVKKEADKVAKDTKEGVKKAG
Ga0316631_100569252	3300033493	Soil	MNKKSFSVLSMVIIAVLMVAIPAVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAAEYIHKAAAYVKKEADKVAKDTKEGVKKAADD
Ga0316628_1009469211	3300033513	Soil	MNKKSFSVLSILIIAVLIAAISAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEADKV
Ga0316628_1010389531	3300033513	Soil	MNKKSFSVLSILITAAWMAAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAY
Ga0316628_1014436092	3300033513	Soil	MNKKSFSVLSMVIIAVLMVAIPVVYAQTSPGDFTNEPDKTMAKAHESFVKGDINKAAEYIHKA
Ga0316628_1026186221	3300033513	Soil	MNKKSFSVLSILITAAWMAAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKD
Ga0316628_1030996402	3300033513	Soil	MLIIAVLMAAIPAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAADQIHKAAVYVKKEADKVAKDAREGVKKAGEDL
Ga0316616_1011147731	3300033521	Soil	MNKSAFSVLSIFIIAAWMAATPAVYSQTSSGDFTNEPDKTMASAHESFLKGETDKAAEQINKAAAYVKKEADKVAKDSKEGVKKAGDD
Ga0316616_1028342662	3300033521	Soil	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSPGDFTNEPNKTMASAHESFLKGERNKAAEQINKAAAYVKKEADKV
Ga0373911_084945_384_572	3300034081	Sediment Slurry	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSPGDFTNEPDKTMASAHESFLKGEMNKAVDQINKA
Ga0373901_011979_1_240	3300034083	Sediment Slurry	MNKKSFSVLSMLIIAVLMAAIPAVYAQTSSGDFTNEPDKTMASAHESFLKGEMNKAAEQINKAAAYVKKEADKVAKDTKE
Ga0373910_0097498_1_228	3300034100	Sediment Slurry	MTKKYFSVLSMLIIAVLMAAIPAVYAQKSPGDITDEPDKTMASAHESFLKGKMNKSAEQIHKAAAYVKKEAGKVAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068997

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences