Metagenome / Metatranscriptome Family F069032

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069032
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	131 residues
Representative Sequence	MKPFTFFVVALALSIPASTSARQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA
Number of Associated Samples	95
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.72 %
% of genes near scaffold ends (potentially truncated)	37.10 %
% of genes from short scaffolds (< 2000 bps)	77.42 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (73.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.742 % of family members)
Environment Ontology (ENVO)	Unclassified (33.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.323 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.81% Coil/Unstructured: 65.19%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02597	ThiS	9.68
PF03712	Cu2_monoox_C	8.06
PF08241	Methyltransf_11	3.23
PF08811	DUF1800	2.42
PF00753	Lactamase_B	2.42
PF12867	DinB_2	2.42
PF10387	DUF2442	1.61
PF02515	CoA_transf_3	1.61
PF12680	SnoaL_2	0.81
PF03576	Peptidase_S58	0.81
PF12555	TPPK_C	0.81
PF12146	Hydrolase_4	0.81
PF02016	Peptidase_S66	0.81
PF13533	Biotin_lipoyl_2	0.81
PF02738	MoCoBD_1	0.81
PF13711	DUF4160	0.81
PF07519	Tannase	0.81
PF00561	Abhydrolase_1	0.81
PF12847	Methyltransf_18	0.81
PF04255	DUF433	0.81
PF00190	Cupin_1	0.81
PF02567	PhzC-PhzF	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	9.68
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	9.68
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	2.42
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.61
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.61
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.81
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.55 %
Unclassified	root	N/A	26.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.87 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	8.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.87 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	8.06 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.87 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	8.06 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.87 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	8.06 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.87 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8.06 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101490901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	975	Open in IMG/M
3300000571\|JGI1358J11329_10131991	Not Available	755	Open in IMG/M
3300000891\|JGI10214J12806_11574909	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300002128\|JGI24036J26619_10078727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	660	Open in IMG/M
3300003321\|soilH1_10172481	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300003324\|soilH2_10033280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3398	Open in IMG/M
3300004058\|Ga0055498_10040379	Not Available	788	Open in IMG/M
3300004114\|Ga0062593_100016392	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300004114\|Ga0062593_100028963	All Organisms → cellular organisms → Bacteria	3112	Open in IMG/M
3300004156\|Ga0062589_100077445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2011	Open in IMG/M
3300004157\|Ga0062590_100494149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300004643\|Ga0062591_100911496	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005093\|Ga0062594_101075100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	783	Open in IMG/M
3300005289\|Ga0065704_10101181	All Organisms → cellular organisms → Bacteria → Acidobacteria	2247	Open in IMG/M
3300005293\|Ga0065715_10101387	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300005331\|Ga0070670_100351007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300005336\|Ga0070680_101633241	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005338\|Ga0068868_101176553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	708	Open in IMG/M
3300005341\|Ga0070691_10318205	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005366\|Ga0070659_101550209	Not Available	591	Open in IMG/M
3300005440\|Ga0070705_100010987	All Organisms → cellular organisms → Bacteria	4551	Open in IMG/M
3300005444\|Ga0070694_100020356	All Organisms → cellular organisms → Bacteria → Acidobacteria	4229	Open in IMG/M
3300005466\|Ga0070685_10205791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300005466\|Ga0070685_11248655	Not Available	566	Open in IMG/M
3300005467\|Ga0070706_100125611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2392	Open in IMG/M
3300005467\|Ga0070706_100792908	Not Available	877	Open in IMG/M
3300005468\|Ga0070707_100414981	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300005468\|Ga0070707_101099272	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300005518\|Ga0070699_100276577	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300005543\|Ga0070672_100303560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300005544\|Ga0070686_100071649	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300005546\|Ga0070696_100131757	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300005549\|Ga0070704_100301283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1335	Open in IMG/M
3300005549\|Ga0070704_101562886	Not Available	608	Open in IMG/M
3300005577\|Ga0068857_101322433	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300005713\|Ga0066905_100273119	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300005829\|Ga0074479_10506013	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300006196\|Ga0075422_10006520	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300006844\|Ga0075428_100145808	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300006844\|Ga0075428_100260658	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300006844\|Ga0075428_101760510	Not Available	646	Open in IMG/M
3300006845\|Ga0075421_100343275	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300006852\|Ga0075433_10046558	All Organisms → cellular organisms → Bacteria	3772	Open in IMG/M
3300006852\|Ga0075433_11582077	Not Available	565	Open in IMG/M
3300006871\|Ga0075434_100151002	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300006871\|Ga0075434_100455505	Not Available	1300	Open in IMG/M
3300006871\|Ga0075434_101853391	Not Available	609	Open in IMG/M
3300006880\|Ga0075429_100361537	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300006903\|Ga0075426_10525975	Not Available	880	Open in IMG/M
3300006904\|Ga0075424_101029991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	877	Open in IMG/M
3300006904\|Ga0075424_101411943	Not Available	739	Open in IMG/M
3300006969\|Ga0075419_10727708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	705	Open in IMG/M
3300009036\|Ga0105244_10458900	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300009090\|Ga0099827_11035875	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300009100\|Ga0075418_10037728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5227	Open in IMG/M
3300009100\|Ga0075418_10274870	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300009147\|Ga0114129_11299329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	902	Open in IMG/M
3300009162\|Ga0075423_10427180	Not Available	1391	Open in IMG/M
3300009176\|Ga0105242_12870213	Not Available	532	Open in IMG/M
3300010362\|Ga0126377_11096916	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300010401\|Ga0134121_10006436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9488	Open in IMG/M
3300011119\|Ga0105246_10388210	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300011119\|Ga0105246_11622703	Not Available	612	Open in IMG/M
3300012203\|Ga0137399_10040733	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300012204\|Ga0137374_10104519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2659	Open in IMG/M
3300012353\|Ga0137367_10883013	Not Available	617	Open in IMG/M
3300012355\|Ga0137369_10549067	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300012685\|Ga0137397_10816884	Not Available	692	Open in IMG/M
3300012901\|Ga0157288_10181262	Not Available	656	Open in IMG/M
3300012905\|Ga0157296_10096215	Not Available	799	Open in IMG/M
3300012912\|Ga0157306_10348583	Not Available	561	Open in IMG/M
3300012922\|Ga0137394_10107856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300012922\|Ga0137394_11591048	Not Available	510	Open in IMG/M
3300012944\|Ga0137410_10357529	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300012944\|Ga0137410_11668802	Not Available	560	Open in IMG/M
3300015245\|Ga0137409_11539847	Not Available	515	Open in IMG/M
3300015371\|Ga0132258_10762331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2438	Open in IMG/M
3300015371\|Ga0132258_12847128	Not Available	1204	Open in IMG/M
3300015372\|Ga0132256_100035432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4548	Open in IMG/M
3300015372\|Ga0132256_100190657	All Organisms → cellular organisms → Bacteria → Acidobacteria	2090	Open in IMG/M
3300015372\|Ga0132256_100828651	Not Available	1041	Open in IMG/M
3300015373\|Ga0132257_101246401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300015374\|Ga0132255_100110621	All Organisms → cellular organisms → Bacteria → Proteobacteria	3752	Open in IMG/M
3300015374\|Ga0132255_100475525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300018028\|Ga0184608_10373643	Not Available	623	Open in IMG/M
3300018052\|Ga0184638_1004088	All Organisms → cellular organisms → Bacteria	4654	Open in IMG/M
3300018053\|Ga0184626_10082952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300018054\|Ga0184621_10073263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1181	Open in IMG/M
3300018076\|Ga0184609_10434160	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300018084\|Ga0184629_10130572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300021073\|Ga0210378_10246822	Not Available	676	Open in IMG/M
3300025885\|Ga0207653_10043235	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300025907\|Ga0207645_10081635	All Organisms → cellular organisms → Bacteria → Acidobacteria	2072	Open in IMG/M
3300025907\|Ga0207645_10091383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1957	Open in IMG/M
3300025910\|Ga0207684_10428222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300025910\|Ga0207684_10675958	Not Available	879	Open in IMG/M
3300025917\|Ga0207660_11261379	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300025922\|Ga0207646_10798754	Not Available	840	Open in IMG/M
3300025926\|Ga0207659_10011587	All Organisms → cellular organisms → Bacteria → Acidobacteria	5576	Open in IMG/M
3300025934\|Ga0207686_10518213	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300025935\|Ga0207709_10172216	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300025942\|Ga0207689_10111939	All Organisms → cellular organisms → Bacteria → Acidobacteria	2244	Open in IMG/M
3300025942\|Ga0207689_10405491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1137	Open in IMG/M
3300025957\|Ga0210089_1049966	Not Available	538	Open in IMG/M
3300026075\|Ga0207708_10534719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	986	Open in IMG/M
3300027815\|Ga0209726_10217730	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300027873\|Ga0209814_10299270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	700	Open in IMG/M
3300027880\|Ga0209481_10176675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300027909\|Ga0209382_10763078	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031720\|Ga0307469_10385376	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300031720\|Ga0307469_12437307	Not Available	511	Open in IMG/M
3300031740\|Ga0307468_100140213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1530	Open in IMG/M
3300031740\|Ga0307468_100179647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300031740\|Ga0307468_101047728	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031820\|Ga0307473_10224051	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300031847\|Ga0310907_10305249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	802	Open in IMG/M
3300032075\|Ga0310890_10462518	Not Available	956	Open in IMG/M
3300032174\|Ga0307470_10167200	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300032180\|Ga0307471_100331742	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300032180\|Ga0307471_100789393	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300032180\|Ga0307471_101137264	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300032180\|Ga0307471_101658741	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300034643\|Ga0370545_022321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.29%
Host-Associated	Host-Associated	38.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.61%
Plants	Host-Associated → Plants	38.71%
Aquatic	Environmental → Aquatic	9.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.87%
Sediment	Environmental → Aquatic → Sediment	5.65%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Marine	Environmental → Aquatic → Marine	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.58%
Loam	Environmental → Terrestrial → Soil → Loam	18.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.61%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1014909012	3300000559	Soil	MTQFTFVVVALALGIPASTPALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPVMPKKWILDGGGNLGPRTGERVEVTGRTDWQPPSAQPSTEEPPERIPHLDVKSLKTVASSCG*
JGI1358J11329_101319911	3300000571	Groundwater	MQLAVKYLFRMKQIAFLIVALASATPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPAPDEPPDRLPHLDVKAVKTVAPRCT*
JGI10214J12806_115749092	3300000891	Soil	TAAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVAAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTDEPPERIPHLDVKSLKTIASTCG*
JGI24036J26619_100787272	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	ALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
soilH1_101724812	3300003321	Sugarcane Root And Bulk Soil	MKQFTFAVAALALGISASTSAFQQPAAPADGKREFVVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQAPAAQTSTEEPPDRIPHLDVKSVKTVASSCS*
soilH2_100332802	3300003324	Sugarcane Root And Bulk Soil	MKQFTLLVVALALGLAASTRAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAAAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTEEPPERLPHLDVKSVKTIASSCG*
Ga0055498_100403791	3300004058	Natural And Restored Wetlands	MKQFTFVVVALALGVPASTPAFQQTAAPDDDKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQARSPQPSTEEPAERIPHLDVKSLKTLASSCT*
Ga0062593_1000163925	3300004114	Soil	MTPFTFVVVVLVLGLPASTAAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVAAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTDEPPERIPHLDVKSLKTIASTCG*
Ga0062593_1000289632	3300004114	Soil	MKQLAFVVVALALGIPASTPALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAAAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPAAQPSTGEPPERIPHLDVKSVKTVASSCA*
Ga0062589_1000774452	3300004156	Soil	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0062590_1004941492	3300004157	Soil	MKQCTFVLVALAFGMPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPEPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0062591_1009114963	3300004643	Soil	GAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQAPSEKPSADEPPDRIPHLDVKSLKTVASSCA*
Ga0062594_1010751002	3300005093	Soil	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0065704_101011812	3300005289	Switchgrass Rhizosphere	MKPFTFVVVALALGLPPSTLAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTEGAPDRLPHLDVKSLKTIASSCG*
Ga0065715_101013871	3300005293	Miscanthus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPS
Ga0070670_1003510072	3300005331	Switchgrass Rhizosphere	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRIVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0070680_1016332412	3300005336	Corn Rhizosphere	AALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0068868_1011765532	3300005338	Miscanthus Rhizosphere	IPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0070691_103182052	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPASAQPSPEEPPDRVPHLDLKSVKTVASSCG*
Ga0070659_1015502092	3300005366	Corn Rhizosphere	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTYWQARPAQPATDEPPDRIPHLDVKSLKTIA
Ga0070705_1000109875	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTASPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSAEEPPDRVPHLDVKSVKTVASSCG*
Ga0070694_1000203564	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPASAQPSPEEPPDRVPHLDVKSVKTVASSCG*
Ga0070685_102057911	3300005466	Switchgrass Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRSDWQARPAQPSTEEPPDRIPHLD
Ga0070685_112486551	3300005466	Switchgrass Rhizosphere	LMKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0070706_1001256114	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPPLPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPS
Ga0070706_1007929082	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGRREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASNCG*
Ga0070707_1004149812	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSAEEPPDRVPHLDVKSVKTVASSCG*
Ga0070707_1010992721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPPLPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPRCT*
Ga0070699_1002765772	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFFVVALALSIPASTSARQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA*
Ga0070672_1003035601	3300005543	Miscanthus Rhizosphere	CGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0070686_1000716493	3300005544	Switchgrass Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRSDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0070696_1001317572	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVIVALALSIPASTPAFQQTTAPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPATPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA*
Ga0070704_1003012832	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRMPDPAPASATPLPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPRCT*
Ga0070704_1015628861	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKPIAFLIVALASAMPVRTPAFQEPPPDDGKREFIVAGCLLRNGYAGYALDESRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCS*
Ga0068857_1013224331	3300005577	Corn Rhizosphere	TPFTFVVVVLVLGLPASTAAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVAAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTDEPPERIPHLDVKSLKTIASTCG*
Ga0066905_1002731192	3300005713	Tropical Forest Soil	MKPFTFVVVAVALGIPMSTPAFQQTAAPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPAPPSAPTMPKKWILDGGGNLAPHTGEKVEVTGRTDWQAPDAPPSTQEPPERIPHLDVKSLKTVA
Ga0074479_105060132	3300005829	Sediment (Intertidal)	VRALSIRVAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDGRVLAIDGTRLPDPAPASGPSMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPRCT*
Ga0075422_100065203	3300006196	Populus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILEGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0075428_1001458083	3300006844	Populus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREVVVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAPAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA*
Ga0075428_1002606582	3300006844	Populus Rhizosphere	MKPFTFIVVALALGIPMSTPALQQTAPEDGKREFIVSGCLLRNGYAGYAIEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQPPAAQPSNQEPPDRIPHLDVKSLKTVASSCA*
Ga0075428_1017605101	3300006844	Populus Rhizosphere	VTQMKQIAFLIVALASAMPARTPAFQQAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT*
Ga0075421_1003432752	3300006845	Populus Rhizosphere	VTQMKQIAFLIVALASAMPARTPAFQQAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT*
Ga0075433_100465584	3300006852	Populus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASSCG*
Ga0075433_115820772	3300006852	Populus Rhizosphere	VGLMKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCG*
Ga0075434_1001510021	3300006871	Populus Rhizosphere	KPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASSCG*
Ga0075434_1004555052	3300006871	Populus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCS*
Ga0075434_1018533911	3300006871	Populus Rhizosphere	LALGIPASMSAFQQTAAPPDDGKREFVVSGCLLRNGYAGYAVEDSRVVAIDGKRLSDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSLKTVASSCG*
Ga0075429_1003615373	3300006880	Populus Rhizosphere	PTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCV
Ga0075426_105259752	3300006903	Populus Rhizosphere	MSAFQQTAAPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASSCG*
Ga0075424_1010299911	3300006904	Populus Rhizosphere	PTAPGCILLRATRRWETIDLDGVGLMKPFTFVVVALALGIPARGFQQTAAPDDGKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPATPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASSCG*
Ga0075424_1014119432	3300006904	Populus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASSCA*
Ga0075419_107277082	3300006969	Populus Rhizosphere	MKPFTFVLVALAFGLPTLTAALQQTAAPDDGKREVVVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAPAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPPTEEPPDRIPHLDVKSLKTIASSCA*
Ga0105244_104589002	3300009036	Miscanthus Rhizosphere	VLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0099827_110358751	3300009090	Vadose Zone Soil	MPARMPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPARLPHLDVKAVKTVAPSCT
Ga0075418_100377284	3300009100	Populus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPPTEEPPDRIPHLDVKSLKTIASSCA*
Ga0075418_102748702	3300009100	Populus Rhizosphere	MKQIAFLIVALASAMPARTPAFQHAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT*
Ga0114129_112993292	3300009147	Populus Rhizosphere	MKPFTFVLVALAFGLPTLTAALQQTAAPDDGKREVVVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAPAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCV*
Ga0075423_104271801	3300009162	Populus Rhizosphere	AFQQTAAPPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCG*
Ga0105242_128702132	3300009176	Miscanthus Rhizosphere	MKPFTFIVVALALGIPASTSGVQQTAPEDGKREFIVSGCLLRNGYAGYAIEESRVVAIDGKRLPDPAPASAPAMPKRWILDGGGNLGPRTGEKVEVTGRTDWQSRPAQPS
Ga0126377_110969162	3300010362	Tropical Forest Soil	MKPFTFVVVALALGIPASTPALQQTATPDDGKREFIVSGCLLRNGYAGCAVEDSRVLAIDGKRLPDPAPASAPVMPKKWILDGGGNLGPRTGEKEEVTGRTDWQPRPAQPSTEEPPERIPHLDV
Ga0134121_100064363	3300010401	Terrestrial Soil	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPASAQPSPEEPPDRVPRLDLKSVKTVASSCG*
Ga0105246_103882101	3300011119	Miscanthus Rhizosphere	IAFLIVALASAMAPRTPAAQQASPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT*
Ga0105246_116227031	3300011119	Miscanthus Rhizosphere	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTI
Ga0137399_100407334	3300012203	Vadose Zone Soil	MKRFGFVVFALALGSLASTPAAQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA*
Ga0137374_101045191	3300012204	Vadose Zone Soil	IPASTAAFQPTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVVIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPEEPPERIPHLDVKSLKTLASSCA*
Ga0137367_108830131	3300012353	Vadose Zone Soil	VQFTFVVVALALGIPASTAAFQPTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVVIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPEEPPERIPHLDVKSLKTLASSCA*
Ga0137369_105490672	3300012355	Vadose Zone Soil	AVTALALGMSAWTPALQQAATPDDGKREFIVSGCLLRSGYAGYAIDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRSDWTPRSPDASPDEPPERDPHLDVKAVKTVAPSCT*
Ga0137397_108168841	3300012685	Vadose Zone Soil	LALGILASTPAAQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPSTQPSPEEPRDRGPHLDVKSVKTVASSCA*
Ga0157288_101812621	3300012901	Soil	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQALPAQPATDEPPDRIPHLDVKSLKTTASSCA*
Ga0157296_100962151	3300012905	Soil	MKQCTFVLVALAFGMPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPEPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQARQAQ
Ga0157306_103485831	3300012912	Soil	RRQTEIDSVFSGPGLRVLMKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA*
Ga0137394_101078561	3300012922	Vadose Zone Soil	MKRFGFVVVALALGSLASTPAAQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPERVPHLDVKSVKTVASSCA*
Ga0137394_115910481	3300012922	Vadose Zone Soil	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPGRLPHLDVKAVKTLAPRCT*
Ga0137410_103575292	3300012944	Vadose Zone Soil	MKRFGFVVVALALGSLASTPAAQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA*
Ga0137410_116688021	3300012944	Vadose Zone Soil	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPARLPHLDVKAVKTVAPSCT*
Ga0137409_115398471	3300015245	Vadose Zone Soil	MKQVAFLIIALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPP
Ga0132258_107623311	3300015371	Arabidopsis Rhizosphere	FTFVVVALALGVPAATSGFQQSAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTEERPDRTPHLDVKSLKTVASSCG*
Ga0132258_128471283	3300015371	Arabidopsis Rhizosphere	MKQLTLLVVALALGLAAPTLAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQP
Ga0132256_1000354326	3300015372	Arabidopsis Rhizosphere	MKPFTFVVVALVLGAPASTPAFQQAGAPDDGKREFVVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQPPPAQPSTEEPADRVPHLDVKGLKTVASSCA*
Ga0132256_1001906572	3300015372	Arabidopsis Rhizosphere	MKRFTFVVVALALGVPAATSGFQQSAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTEERPDRTPHLDVKSLKTVASSCG*
Ga0132256_1008286511	3300015372	Arabidopsis Rhizosphere	MKQLTLLVVALALGLAAPTLAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTGEPPERIPHLDVKSLK
Ga0132257_1012464011	3300015373	Arabidopsis Rhizosphere	MKRFTFVVVALALGVPAATSGFQQSAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTE
Ga0132255_1001106212	3300015374	Arabidopsis Rhizosphere	MKPFTFVVVALVLGAPASTPAFQQAGAPDDGKREFVVSGCLVRNGYAGYAVEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQPPPAQPSTEEPADRVPHLDLKALKTVASSCA*
Ga0132255_1004755252	3300015374	Arabidopsis Rhizosphere	MKRFTFVVVALALGVPAATSGFQQSAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTEERSDRTPHLDVKSLKTVASSCG*
Ga0184608_103736431	3300018028	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRVPHLDVKAVKTLAPSCT
Ga0184638_10040882	3300018052	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0184626_100829522	3300018053	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPRCT
Ga0184621_100732632	3300018054	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVGDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0184609_104341602	3300018076	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPSMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0184629_101305722	3300018084	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPAFAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTLAPSCT
Ga0210378_102468221	3300021073	Groundwater Sediment	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPPLPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0207653_100432352	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRSDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0207645_100816351	3300025907	Miscanthus Rhizosphere	MKQFTFVLVAFACGIPTFTAALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA
Ga0207645_100913832	3300025907	Miscanthus Rhizosphere	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0207684_104282221	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKQIAFLIVALASAMPARTPAFQQAPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPPLPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPRCT
Ga0207684_106759582	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVVVALALGIPASMSAFQQTAAPPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSVKTVASNCG
Ga0207660_112613791	3300025917	Corn Rhizosphere	AALQQTAVPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPTPASAPAMPKKWILDGGGNLAPHTGEKVEVTGRTDWQARPAQPATDEPPDRIPHLDVKSLKTIASSCA
Ga0207646_107987541	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKPFTFVIIALALSIPASTPAFQQTTAPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPATPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA
Ga0207659_100115871	3300025926	Miscanthus Rhizosphere	APDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0207686_105182132	3300025934	Miscanthus Rhizosphere	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPASAQPSPEEPPDRVPHLDLKSVKTVASSCG
Ga0207709_101722162	3300025935	Miscanthus Rhizosphere	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPASAQPSPEEPPDRVPHLDVKSVKTVASSCG
Ga0207689_101119392	3300025942	Miscanthus Rhizosphere	MTPFTFVVVVLVLGLPASTAAVQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVAAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQAPSAQPSTDEPPERIPHLDVKSLKTIASTCG
Ga0207689_104054911	3300025942	Miscanthus Rhizosphere	TAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0210089_10499661	3300025957	Natural And Restored Wetlands	MKQFTFVVVALALGVPASTPAFQQTAAPDDDKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEVTGRTDWQARSPQPSTEEPAERIPHLDVKSLKTLASSCT
Ga0207708_105347192	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKQFRFVVVALTLGIPVSTLAVQQTAAPDDGKREFVVSGCLLRNGYAGYAVDDGRVVSIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0209726_102177302	3300027815	Groundwater	MKQIAFLIVALASAMAARAPALQQASPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSARPSPDEPPDRLPHLDVKTVKTVAPSCT
Ga0209814_102992702	3300027873	Populus Rhizosphere	MKPFTFVVVALALGIPTSTPAFQQTAAPDDGKREFVVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRIPHLDVKSLKTIASSCV
Ga0209481_101766752	3300027880	Populus Rhizosphere	MKPFTFVLVALAFGLPTLTAALQQTAAPDDGKREVVVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPAPAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPPTE
Ga0209382_107630782	3300027909	Populus Rhizosphere	MKQIAFLIVALASAMPARTPAFQQAAPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0307469_103853761	3300031720	Hardwood Forest Soil	MKPIACLIVAFVLAMAAQTPAVQQASPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPTCA
Ga0307469_124373071	3300031720	Hardwood Forest Soil	MKPFTFVVVALALGIPASTPALQQTAAPDAGKREFIVSGCLLRNGYAGYAIEDSRVVAIDGKRLPDPAPASAPVMPKKWILDGGGNLGPRTGEKVEVTGRTDWQPRPAQPSTEEPPDRI
Ga0307468_1001402132	3300031740	Hardwood Forest Soil	RTPAFQQPPPDDGKREFIVAGCLLRNGYAGYALDESRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPLSAQPSPDEPPDRIPHLDVKAVKTVAPNC
Ga0307468_1001796472	3300031740	Hardwood Forest Soil	AGVFSGGLMKPLTFVIVAVALGISSTSALQQPPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQAPSTQPSTEEPPDRIPHLDVKSLKTVASSCG
Ga0307468_1010477282	3300031740	Hardwood Forest Soil	MKQFTFVVVALALGIPASTPALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPGSAPVMPKKWILDGGGNLGPRTGEKVEVTGRTDWQPRPPQPSTEEPPERIPHLDVKALKTIASSCA
Ga0307473_102240513	3300031820	Hardwood Forest Soil	GIPASTRGFQQTAAPDDGKREFIVSGCQLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRAGEKVEVTGRTDWQPPPAQPSTEEPPDRVPHLDVKSVKTVASSCA
Ga0310907_103052493	3300031847	Soil	FTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASSCA
Ga0310890_104625182	3300032075	Soil	MKQFTFVLVALAFGIPTLTAALQQTAAPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPHTGEKVEITGRTDWQARPAQPSTEEPPDRIPHLDVKSLKTIASGCA
Ga0307470_101672002	3300032174	Hardwood Forest Soil	MKPIACLIVAFVLAMAAQTPAVQQASPDDGKREFIVSGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKA
Ga0307471_1003317422	3300032180	Hardwood Forest Soil	MKQMAFLIVALASAMAAPTPAFQQAPPDDGKREFIVAGCLLRNGYAGYAVEDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRVPHLDVKTVKTVAPSCT
Ga0307471_1007893932	3300032180	Hardwood Forest Soil	MKPIAFLIVALASAMPVRTPAFQQPPPDDGKREFIVAGCLLRNGYAGYALDESRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCS
Ga0307471_1011372642	3300032180	Hardwood Forest Soil	MKPIACLIVAFVLAMPAQTPAVQQASPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAIDGKRLPDPAPASAPAMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT
Ga0307471_1016587412	3300032180	Hardwood Forest Soil	MKPLTFVIVAVALGISSTSALQQPPDDGKREFIVSGCLLRNGYAGYAVEESRVVAIDGKRLPDPAPASAPAMPKKWILDGGGNLGPRTGEKVEVTGRTDWQPPSAQPSAEEPPDRLPHLDVKSVKTVASSCG
Ga0307471_1018054592	3300032180	Hardwood Forest Soil	VTFVVLWSAFILGAQAPSSPPDDGKREFTVSGCLLRNGYAGYQLYPARVEAIDGKAVAAPSTAATAAAPGMPKKWILDGGGNLGTSTGKQVEVIGRSDWQPPSAPTSDEPPNRTPHLDVKSVKTIAPTCS
Ga0370545_022321_29_433	3300034643	Soil	MKQIAFLIVALASAMPARTPAFQQVPPDDGKREFIVSGCLLRNGYAGYAVDDSRVVAVDGKRLPDPAPASAPPMPKKWVLDGGGNLGPRAGEKVEVTGRTDWQPPSAQPSPDEPPDRLPHLDVKAVKTVAPSCT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences