Metagenome Family F069085

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069085
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	65 residues
Representative Sequence	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Number of Associated Samples	90
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.23 %
% of genes near scaffold ends (potentially truncated)	87.10 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.742 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.226 % of family members)
Environment Ontology (ENVO)	Unclassified (45.968 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.742 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.47% β-sheet: 17.89% Coil/Unstructured: 72.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02768	DNA_pol3_beta_3	7.26
PF13538	UvrD_C_2	6.45
PF00216	Bac_DNA_binding	3.23
PF13604	AAA_30	2.42
PF02201	SWIB	1.61
PF09720	Unstab_antitox	1.61
PF01526	DDE_Tnp_Tn3	1.61
PF14451	Ub-Mut7C	0.81
PF13424	TPR_12	0.81
PF09299	Mu-transpos_C	0.81
PF00484	Pro_CA	0.81
PF13676	TIR_2	0.81
PF07690	MFS_1	0.81
PF07311	Dodecin	0.81
PF10431	ClpB_D2-small	0.81
PF00483	NTP_transferase	0.81
PF01051	Rep_3	0.81
PF02515	CoA_transf_3	0.81
PF04255	DUF433	0.81
PF08357	SEFIR	0.81
PF00535	Glycos_transf_2	0.81
PF14486	DUF4432	0.81
PF00463	ICL	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	7.26
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.23
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.61
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	1.61
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.81
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.81
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.81
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.81
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.81
COG5527	Protein involved in initiation of plasmid replication	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
All Organisms	root	All Organisms	32.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
cellular organisms	root	All Organisms → cellular organisms	32.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.42 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.06 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.42 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Verrucomicrobiota incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.42 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.61 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.81 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.81 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.42 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.61 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.81 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	0.81 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.42 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.61 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.81 %
Aquabacterium pictum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	0.81 %
Methylacidimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	0.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01DDMIR	Not Available	500	Open in IMG/M
2170459010\|GIO7OMY02JC15N	Not Available	547	Open in IMG/M
3300000955\|JGI1027J12803_102931981	Not Available	560	Open in IMG/M
3300002245\|JGIcombinedJ26739_100145586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiota incertae sedis → Methylacidimicrobium	2239	Open in IMG/M
3300003219\|JGI26341J46601_10042938	Not Available	1436	Open in IMG/M
3300003219\|JGI26341J46601_10118945	Not Available	757	Open in IMG/M
3300003219\|JGI26341J46601_10128345	Not Available	720	Open in IMG/M
3300003219\|JGI26341J46601_10158661	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300003368\|JGI26340J50214_10037232	Not Available	1408	Open in IMG/M
3300003368\|JGI26340J50214_10055828	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300003368\|JGI26340J50214_10095446	Not Available	766	Open in IMG/M
3300003368\|JGI26340J50214_10122009	Not Available	660	Open in IMG/M
3300004152\|Ga0062386_101128865	Not Available	651	Open in IMG/M
3300005332\|Ga0066388_101565042	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005439\|Ga0070711_100049682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2872	Open in IMG/M
3300005445\|Ga0070708_101384106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	656	Open in IMG/M
3300005468\|Ga0070707_100544630	Not Available	1123	Open in IMG/M
3300005471\|Ga0070698_100233546	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1772	Open in IMG/M
3300005471\|Ga0070698_100903757	Not Available	828	Open in IMG/M
3300005518\|Ga0070699_100031448	All Organisms → cellular organisms → Bacteria	4582	Open in IMG/M
3300005536\|Ga0070697_101815180	Not Available	545	Open in IMG/M
3300005559\|Ga0066700_10546508	Not Available	808	Open in IMG/M
3300005559\|Ga0066700_10901058	Not Available	588	Open in IMG/M
3300005610\|Ga0070763_10087501	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300005764\|Ga0066903_102149649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1075	Open in IMG/M
3300006176\|Ga0070765_100809326	Not Available	885	Open in IMG/M
3300006176\|Ga0070765_101002567	Not Available	789	Open in IMG/M
3300006354\|Ga0075021_10995360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	547	Open in IMG/M
3300009143\|Ga0099792_10484144	Not Available	772	Open in IMG/M
3300009522\|Ga0116218_1123679	Not Available	1177	Open in IMG/M
3300010341\|Ga0074045_10370201	Not Available	932	Open in IMG/M
3300010341\|Ga0074045_10930703	Not Available	548	Open in IMG/M
3300010343\|Ga0074044_10103046	Not Available	1920	Open in IMG/M
3300010343\|Ga0074044_10227488	Not Available	1235	Open in IMG/M
3300010379\|Ga0136449_101407918	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300010379\|Ga0136449_101893788	Not Available	887	Open in IMG/M
3300010379\|Ga0136449_104267136	Not Available	529	Open in IMG/M
3300011271\|Ga0137393_10938471	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300012189\|Ga0137388_10102576	Not Available	2460	Open in IMG/M
3300012202\|Ga0137363_10189772	Not Available	1642	Open in IMG/M
3300012202\|Ga0137363_11258652	Not Available	627	Open in IMG/M
3300012202\|Ga0137363_11660121	Not Available	531	Open in IMG/M
3300012205\|Ga0137362_10754184	Not Available	835	Open in IMG/M
3300012205\|Ga0137362_11791463	Not Available	501	Open in IMG/M
3300012211\|Ga0137377_11320507	Not Available	651	Open in IMG/M
3300012582\|Ga0137358_10977372	Not Available	549	Open in IMG/M
3300012917\|Ga0137395_10664535	Not Available	754	Open in IMG/M
3300012918\|Ga0137396_11242521	Not Available	522	Open in IMG/M
3300012923\|Ga0137359_10129682	Not Available	2241	Open in IMG/M
3300012924\|Ga0137413_10351528	Not Available	1046	Open in IMG/M
3300016319\|Ga0182033_11579195	Not Available	593	Open in IMG/M
3300016341\|Ga0182035_11117923	Not Available	702	Open in IMG/M
3300016357\|Ga0182032_11381236	Not Available	609	Open in IMG/M
3300016371\|Ga0182034_11016567	Not Available	716	Open in IMG/M
3300016404\|Ga0182037_10634202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	909	Open in IMG/M
3300020579\|Ga0210407_10220752	All Organisms → cellular organisms → Bacteria → PVC group	1474	Open in IMG/M
3300020580\|Ga0210403_10244300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1473	Open in IMG/M
3300020580\|Ga0210403_10858233	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300020581\|Ga0210399_11238175	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300020583\|Ga0210401_10104610	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300021171\|Ga0210405_10526516	Not Available	925	Open in IMG/M
3300021171\|Ga0210405_10885141	Not Available	679	Open in IMG/M
3300021171\|Ga0210405_11162079	Not Available	574	Open in IMG/M
3300021178\|Ga0210408_10578261	Not Available	890	Open in IMG/M
3300021178\|Ga0210408_10599341	Not Available	872	Open in IMG/M
3300021180\|Ga0210396_10589320	Not Available	967	Open in IMG/M
3300021181\|Ga0210388_10533101	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300021181\|Ga0210388_11814776	Not Available	502	Open in IMG/M
3300021401\|Ga0210393_10728028	Not Available	808	Open in IMG/M
3300021401\|Ga0210393_11674117	Not Available	503	Open in IMG/M
3300021404\|Ga0210389_10445329	Not Available	1019	Open in IMG/M
3300021404\|Ga0210389_11046819	Not Available	632	Open in IMG/M
3300021405\|Ga0210387_10427028	Not Available	1175	Open in IMG/M
3300021405\|Ga0210387_10733863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	874	Open in IMG/M
3300021405\|Ga0210387_10941465	Not Available	758	Open in IMG/M
3300021405\|Ga0210387_11699553	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021406\|Ga0210386_10281379	Not Available	1423	Open in IMG/M
3300021407\|Ga0210383_10009235	All Organisms → cellular organisms → Bacteria	8463	Open in IMG/M
3300021475\|Ga0210392_11058899	Not Available	607	Open in IMG/M
3300021477\|Ga0210398_10232988	Not Available	1501	Open in IMG/M
3300021479\|Ga0210410_10307276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1423	Open in IMG/M
3300021559\|Ga0210409_10485929	Not Available	1098	Open in IMG/M
3300022557\|Ga0212123_10215709	All Organisms → cellular organisms → Bacteria → PVC group	1408	Open in IMG/M
3300025910\|Ga0207684_10675618	Not Available	879	Open in IMG/M
3300025922\|Ga0207646_11296725	Not Available	636	Open in IMG/M
3300025922\|Ga0207646_11380515	Not Available	613	Open in IMG/M
3300026490\|Ga0257153_1025636	Not Available	1214	Open in IMG/M
3300027521\|Ga0209524_1040306	Not Available	982	Open in IMG/M
3300027603\|Ga0209331_1043971	Not Available	1135	Open in IMG/M
3300027651\|Ga0209217_1048048	All Organisms → cellular organisms → Bacteria → PVC group	1293	Open in IMG/M
3300027651\|Ga0209217_1119554	Not Available	743	Open in IMG/M
3300027667\|Ga0209009_1029371	Not Available	1353	Open in IMG/M
3300027680\|Ga0207826_1001638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6395	Open in IMG/M
3300027681\|Ga0208991_1026659	All Organisms → cellular organisms → Bacteria → PVC group	1748	Open in IMG/M
3300027783\|Ga0209448_10120047	Not Available	880	Open in IMG/M
3300027812\|Ga0209656_10033728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	3010	Open in IMG/M
3300027812\|Ga0209656_10082695	Not Available	1724	Open in IMG/M
3300027812\|Ga0209656_10393760	Not Available	622	Open in IMG/M
3300027824\|Ga0209040_10370529	Not Available	674	Open in IMG/M
3300027824\|Ga0209040_10429834	Not Available	606	Open in IMG/M
3300027825\|Ga0209039_10070345	Not Available	1548	Open in IMG/M
3300027825\|Ga0209039_10211504	Not Available	785	Open in IMG/M
3300027829\|Ga0209773_10369425	Not Available	597	Open in IMG/M
3300027884\|Ga0209275_10172740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300028047\|Ga0209526_10541901	Not Available	753	Open in IMG/M
3300031474\|Ga0170818_114538311	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031546\|Ga0318538_10413206	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031573\|Ga0310915_10529351	Not Available	837	Open in IMG/M
3300031719\|Ga0306917_10092932	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300031754\|Ga0307475_10815832	Not Available	740	Open in IMG/M
3300031796\|Ga0318576_10489987	Not Available	580	Open in IMG/M
3300031820\|Ga0307473_10057289	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300031820\|Ga0307473_10560397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	782	Open in IMG/M
3300031820\|Ga0307473_10741936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	694	Open in IMG/M
3300031910\|Ga0306923_10350772	All Organisms → cellular organisms → Bacteria → PVC group	1682	Open in IMG/M
3300031945\|Ga0310913_11082654	Not Available	560	Open in IMG/M
3300031946\|Ga0310910_11076676	Not Available	626	Open in IMG/M
3300032001\|Ga0306922_12341258	Not Available	511	Open in IMG/M
3300032035\|Ga0310911_10818602	Not Available	538	Open in IMG/M
3300032091\|Ga0318577_10233919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	880	Open in IMG/M
3300032160\|Ga0311301_10693136	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300032180\|Ga0307471_100964374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1020	Open in IMG/M
3300032205\|Ga0307472_101840576	Not Available	602	Open in IMG/M
3300032261\|Ga0306920_103432910	Not Available	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.87%
Aquatic	Environmental → Aquatic	16.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.87%
Freshwater	Environmental → Aquatic → Freshwater	14.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.48%
Loam	Environmental → Terrestrial → Soil → Loam	20.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.23%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.03%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.42%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_07141310	2170459009	Grass Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFIWNPDSA
F62_08047560	2170459010	Grass Soil	MSKRRTREKKSAKPQQPAKPEEISVGRRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESRFRLNP
JGI1027J12803_1029319811	3300000955	Soil	MSKRTREEKSAKSQQLAKPDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGE
JGIcombinedJ26739_1001455864	3300002245	Forest Soil	MSKRTREKKGAKSQQLAKPDAISIGRRFAQPYGKARLLVDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEV
JGI26341J46601_100429382	3300003219	Bog Forest Soil	MSKRTREKKAAKSQQPAKPDAISIGRKFAQPYAKARLLIEHPHSYREWNIVGQYDVPGFFYLESRFRLNPGDL
JGI26341J46601_101189451	3300003219	Bog Forest Soil	MSKRTREKKSAKPQRPAKPDEILVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFF
JGI26341J46601_101283451	3300003219	Bog Forest Soil	MSKRTREKKAAKSQQPAKPDAISIGRKFAPPYAKARLLIDHPHSYREWNIVGQYDVPGFFYLESRFRLNPGDL
JGI26341J46601_101586611	3300003219	Bog Forest Soil	MSKRTEKRKAQSLEQLAKPDEISIGRKFAQPYAKARLLIDHPHSYREWNIVGXXDVPGFFYLESQFRLNPG
JGI26340J50214_100372321	3300003368	Bog Forest Soil	MSKRRTREKKSAKPQQPAKPEEISVGRRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESRFRLNPGE
JGI26340J50214_100558281	3300003368	Bog Forest Soil	MSKRTREKKGAKSQQPAKPDAISIGRRFAQPYCKARLLIDHPHSYREWNIVGQCDV
JGI26340J50214_100954462	3300003368	Bog Forest Soil	MSKRTREKKSAKPQXPAKPDEILVGRXFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFF
JGI26340J50214_101220091	3300003368	Bog Forest Soil	MSKRTREKKGAESQPPAKPAAISMGRKFAQPYAKARLLFDHPHSYREWNLVGQSDVPGFF
Ga0062386_1011288652	3300004152	Bog Forest Soil	MSKRTREKKDAKSQQLAKPDEISVGRRFAQPYAKARLLIDHPHSYRQWNIVGQCDVPGFFYLESRF
Ga0066388_1015650422	3300005332	Tropical Forest Soil	MSKRTKRRKNAKSQQLAKPDGIATGRKFAQSYDKLRLLIEHPHTYREWNIVGRCDVPGFFYLESQFR*
Ga0070711_1000496821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREKKSAKPQQPAKPNEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLNPG
Ga0070708_1013841061	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREEKSSKPQQLAKLDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQ
Ga0070707_1005446301	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTRGRKGAKSQQLAKPDEISFGRRFAQPYAKAHLLIDHPHSYREWNIVGQCDVPGFF
Ga0070698_1002335465	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREKKRKAQSLEQLAKPDAISIGRKLAQPYGKARLLIEHPHSYREWNIVGHDEVPGFFYLESRFRLNPGE
Ga0070698_1009037571	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTRKKKSAKLQPLAKPDAISIGRRFAQPYAKARLLFDHPHSYREWNIVGQCD
Ga0070699_1000314486	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREKKSAKLEQLIKPDETSIGRRFAQPYDKARLLIEHPHSYREWNIVGRCDVPGFFYLESRFR*
Ga0070697_1018151802	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREKKDAKSQLLAKPDAISIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEQ
Ga0066700_105465083	3300005559	Soil	VSKRIRKKKAPKSQQQSAKPDEISIGRKFAQPYAKARLLIEHPHSYREWNIVGQW*
Ga0066700_109010581	3300005559	Soil	MSKRTREKKGAKSQLLSKPDEIAIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEQPA
Ga0070763_100875012	3300005610	Soil	MSKRTREKKNAKPQQAAKPDEISVGRRFAQPYAKARLLFDRPHSYREWNIVGQYNVPGFFYLESRFRLNPGEQ
Ga0066903_1021496491	3300005764	Tropical Forest Soil	MSKRTREEKSAKSQQLAKPDAISSGRRFAQPHVGKARLLIDHPHSYREWNIVGQCDVPGFFYLES
Ga0070765_1008093261	3300006176	Soil	MSKRTREKKKRKASASRKARRDLGGRRFAQPYAKARLLFDRPHSYREWNIVGQYNVPGFFYLESRFR*
Ga0070765_1010025671	3300006176	Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLGPG
Ga0075021_109953603	3300006354	Watersheds	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVP
Ga0099792_104841441	3300009143	Vadose Zone Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYL
Ga0116218_11236792	3300009522	Peatlands Soil	MSKRTREKKSAKPQRPAKPDEILVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFSIWNPDSA*
Ga0074045_103702011	3300010341	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESRFRLNPGEQ
Ga0074045_109307031	3300010341	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEILVGRRFAQPYAKVRLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLN
Ga0074044_101030461	3300010343	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEILVGRRFAQPYAKVRLLFDHPHSYREWNIVGQYDVPGFFYL
Ga0074044_102274882	3300010343	Bog Forest Soil	MSKRTRTREKKGAKSQQPAKPDEISIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLESRFR
Ga0136449_1014079181	3300010379	Peatlands Soil	MAAMSKRTREKKRKAQSLEQFAKPDEISIGRKFAQPYAKARLLIDHPHSYREWNIV
Ga0136449_1018937881	3300010379	Peatlands Soil	MSKRTREKKSAKPQQPAKPDEILVGRRFAQPYAKVRLLFDHPHSYREWNIVGQYDVPGFSIWNPDSA*
Ga0136449_1042671361	3300010379	Peatlands Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLN
Ga0137393_109384712	3300011271	Vadose Zone Soil	MSKRRGEKNAKSQQLAKRDKISSGRQFAQSYSKVRLLIDHPHSYREWNIVGQCGVPGFFYLESRFR*
Ga0137388_101025764	3300012189	Vadose Zone Soil	MSKRTREKKSAKPQQPAKPDEMSVGRKFAQSYAKARLLFDHPHSYREWNIVGQYC
Ga0137363_101897723	3300012202	Vadose Zone Soil	MSKRTREKKVQSLSNPQSPTRFRLAGGLPNPTVRLASLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGE
Ga0137363_112586521	3300012202	Vadose Zone Soil	MSKRTREEKSAKPQQLAKLDAISIGRRFAQPYDKARLLIDHPHSYREWNIVGQCDVPGFFYL
Ga0137363_116601211	3300012202	Vadose Zone Soil	MSKRIREGKNAKSQQPAKPDAISIGRKFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYL
Ga0137362_107541842	3300012205	Vadose Zone Soil	LRSTAMSKRTREEKSAKSQQPAKPDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGRCDVPGFFYFGIPIPLKPW*
Ga0137362_117914632	3300012205	Vadose Zone Soil	MSKRTREKKGAKSQQPAKPDAISIGRRFAQPYAKARLLIDHPHSYREWNIVGQCDV
Ga0137377_113205071	3300012211	Vadose Zone Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAQARLLFDHPRSYREWNIVGQYDVPGFFYLESRF
Ga0137358_109773721	3300012582	Vadose Zone Soil	MVMSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLSDHPHSYREWNIVGQCDVSG
Ga0137395_106645351	3300012917	Vadose Zone Soil	MSKRTREKKGAKSQQPAKPDALSIGRKFAPPYGKARLLIDHPHSYRGWNIVC
Ga0137396_112425212	3300012918	Vadose Zone Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGE
Ga0137359_101296821	3300012923	Vadose Zone Soil	MSKRTRKKKAPRSQQQSAKPDEISIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLESR
Ga0137413_103515281	3300012924	Vadose Zone Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Ga0182033_115791952	3300016319	Soil	MSKRTKRRKNAKSQQLAKPDGIATGRKFAQSYDKVRLLIEHPHTYREWNIVGRCDVPGFF
Ga0182035_111179233	3300016341	Soil	MSKRTREEKTQRLEQLAKPDGIATGRKFAQSYGKVRLLIEHPHTYREWNIVGRCDVPGFFYLESRFRLNPGEQ
Ga0182032_113812361	3300016357	Soil	MSKRTREKKSAKPQQFAKPDENSVGRRFAQPYAKARLLIEHPYSYREWNIVGQCDVPGFFYLESRFR
Ga0182034_110165671	3300016371	Soil	MSKRTREKKSAKPQQFAKPDENSVGRRFAQPYAKARLLIEHPHSYREWNIVGQCDVPGF
Ga0182037_106342023	3300016404	Soil	MSKRTREEKTQSLEQLAKPDAISSGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEQ
Ga0210407_102207521	3300020579	Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Ga0210403_102443001	3300020580	Soil	MSKRTREKKRKAQSLEQLAKPDEMSIGRKFAQPYAKARLQIDHPHSYREWSIVGQSDVPGFFY
Ga0210403_108582331	3300020580	Soil	MSKRTREGKNAKSQQPAKPDAISIRRKFAQPYGKARLLIDHPHSYREWNILGQCDVP
Ga0210399_112381751	3300020581	Soil	MSKRRTREKKSAKIQPLAKPDEISVGRSFAQPYAKARLLFDHPHSYREWNIVGQYNVPGFFYLDPDSA
Ga0210401_101046101	3300020583	Soil	MSKRTREKKKRKASASRKARRDLGGRRFAQPYAKARLLFDRPHSYREWNIVGQYNVPGFFYLESRFR
Ga0210405_105265162	3300021171	Soil	MSKRTRKKKSAKLQPLAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLGPG
Ga0210405_108851411	3300021171	Soil	MSKRTREKKRKAQSLEQLAKPDAISIGRRFAQSCGKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNP
Ga0210405_111620791	3300021171	Soil	MSKRSREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRF
Ga0210408_105782611	3300021178	Soil	MSKRTREKKGAKSQQLAKPDEISFGRRFAQPYAKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEQPA
Ga0210408_105993411	3300021178	Soil	MSRRTREKKGTKSQQPAKPDAISIGRRFAQPYGKARLLTDHPHSYREWNIVGQCDVPGFFYLESRFRLNP
Ga0210396_105893201	3300021180	Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLG
Ga0210388_105331011	3300021181	Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLGPGEQPA
Ga0210388_118147761	3300021181	Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLGPGEQ
Ga0210393_107280281	3300021401	Soil	KKRKASASRKARRDLGGRRFAQPYAKARLLFDRPHSYREWNIVGQYNVPGFFYLESRFR
Ga0210393_116741171	3300021401	Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYNVP
Ga0210389_104453292	3300021404	Soil	MSKRTRKKKSAKLQPLAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLGPGEQPAI
Ga0210389_110468191	3300021404	Soil	MSKRTREKKSAKPQQPAKPNEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVP
Ga0210387_104270282	3300021405	Soil	MSKRTRAKKSAKPQQPAKTDEIFVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPG
Ga0210387_107338631	3300021405	Soil	MSKRTREKKRAKPQQLAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFF
Ga0210387_109414651	3300021405	Soil	MSKRTRKKKSAKLQPLAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLG
Ga0210387_116995531	3300021405	Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQY
Ga0210386_102813791	3300021406	Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVP
Ga0210383_100092352	3300021407	Soil	MSKRTREKKNAKPQQAAKPDEISVGRRFAQPYAKARLLFDRPHSYREWNIVGQYNGAGVFLFRIPIPLNPGEQPGDLHGL
Ga0210392_110588991	3300021475	Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFRLNPGEQPA
Ga0210398_102329882	3300021477	Soil	MSKRTREKKRAKPQQLAKPDEISVGRRFAQPYAKARLLFDRPHSYREWNIVGQYNVPGFFYLESRFR
Ga0210410_103072763	3300021479	Soil	MSKRRTREKKSAKPQQPAKPDEISVGQRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESR
Ga0210409_104859292	3300021559	Soil	MSKRTRGKKTAKFQQPAKPDAISIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLE
Ga0212123_102157091	3300022557	Iron-Sulfur Acid Spring	MSKRTREEKSAKSEQLAKPDAISIGRRFAQPYGKARLLIDHPHSYREWNIVSQCDVPGFFYLESR
Ga0207684_106756181	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREKKSAKSQLLAKPDAISIGRKFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLESRFR
Ga0207646_112967251	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTRGRKGAKSQQLAKPDEISFGRRFAQPYAKAHLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPGEQPA
Ga0207646_113805151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTREEKSSKPQQLAKLEAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQCD
Ga0257153_10256361	3300026490	Soil	MSKRTREKKGAKSQQLAKPDDISVGRRFAQPYAKARLLIEHPHSYRQWNIVGQCDVPGFFYLESR
Ga0209524_10403061	3300027521	Forest Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQCDVPGFFYLESRFRLNPG
Ga0209331_10439711	3300027603	Forest Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESRFRLNP
Ga0209217_10480481	3300027651	Forest Soil	MSKRTREEKSAKFQQLAKPDAISNGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFF
Ga0209217_11195541	3300027651	Forest Soil	MSKRARKKKAPKSQQPAKPDEISIGRKFAQPYAKARLLIDHPHSYREWSIVGQCDVPGFFYLESRFRLNPGEQPA
Ga0209009_10293711	3300027667	Forest Soil	MSKRTREKKSAKPQQSAKPDEISVGRRFAQPYAKAWNIVGQYDVPGFFYF
Ga0207826_10016387	3300027680	Tropical Forest Soil	MSRRTREKKGAKSQQLAKPDEISFGRRFAQPYAKTRLLIDHPHSYREWNIVGQCDVPGFFYLESRSEI
Ga0208991_10266592	3300027681	Forest Soil	MSKRTREEKSAKFQQLAKPDAISNGRRFAQPYGKARLLIDHPHSYREWDIVGQCDVPGFFYLESRFRLNP
Ga0209448_101200472	3300027783	Bog Forest Soil	MSKRTRRTREKKGAKPHQPEKPDATSIGRRFAQPYAKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFR
Ga0209656_100337287	3300027812	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEILEGRRFAQPYAKARLLFDHPQSYREWNIVGQYDVPGFFYLESR
Ga0209656_100826951	3300027812	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEILVGRRFAQPYAKARLLFDHPHSYREWNIVGQ
Ga0209656_103937601	3300027812	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEMLVGQRFAQPYAKARLLFDHPHSYREWNIVGQYDVP
Ga0209040_103705292	3300027824	Bog Forest Soil	MSKRTREKKSAKPQRPAKPDEILVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYL
Ga0209040_104298341	3300027824	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEMLVGRRFAQPYAKVRLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Ga0209039_100703454	3300027825	Bog Forest Soil	MSKRTREKKSAKPQQPAKPDEILVGRRFAQPYAKVRLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Ga0209039_102115041	3300027825	Bog Forest Soil	MSKRTREKKSAKPQRPAKPDEILVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGFFYLESRFR
Ga0209773_103694251	3300027829	Bog Forest Soil	MSKRRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHAHSYREWNIVGQYDVPGFFYLESRFRLNPGE
Ga0209275_101727401	3300027884	Soil	MSKRTREGKNAKSQQPAKPDAISIRRKFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYLES
Ga0209526_105419011	3300028047	Forest Soil	MSKRTRGKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDV
Ga0170818_1145383111	3300031474	Forest Soil	MSKRTREKKSAKPQQPAKPDEISVGRRFAQPYAKARLLFDHPHSYREWNIVGQYDVPGF
Ga0318538_104132061	3300031546	Soil	VMSKRTREKKSAKPQQFAKPDENSVGRRFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLVLR
Ga0310915_105293512	3300031573	Soil	MSKRTREKKSAKPQQFAKPDENSVGRRFAQPYAKARLLIEHPHSYREWNIVGQCDVPGFFYLVLR
Ga0306917_100929323	3300031719	Soil	MSKRTREKKSAKPQQFAKPDENSVGRRFAQPYAKARLLIDHPHSYREWDIVGQCDVPEQLTLE
Ga0307475_108158322	3300031754	Hardwood Forest Soil	MSKRTREKKSAKLEQLIKPDETSIGRRFAQPYDKARLLIEHPHSYREWNIVGRCDVPGFFYL
Ga0318576_104899872	3300031796	Soil	MSKRTREEKTQRLEQLAKPDGIATGRKFAQSYGKVRLLIEHPHTYHEWNIVGRCDVPGFFYLESRFRLN
Ga0307473_100572891	3300031820	Hardwood Forest Soil	MSKRTREKKRKAQSLEQLAKPDAISIGRKLAQPYGKARLLIEHPHSYREWNIVGHDEVPGFFYLESRFRL
Ga0307473_105603971	3300031820	Hardwood Forest Soil	MSKRTREEKSAKSQQLAKPDAISIGRRFAQPYGKARLLIDHPHSYRECNIVGQ
Ga0307473_107419361	3300031820	Hardwood Forest Soil	MSKRTREEKSSKPQQLAKLDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYLESRFRLNPG
Ga0306923_103507721	3300031910	Soil	MSKRTREEKTQRLEQLAKPDGIATGRKFAQSYGKVRLLIEHPHTYREWNIVGRCDVPGFF
Ga0310913_110826541	3300031945	Soil	MSKRTKRRKNAKSQQLAKPDGIATGRKFAQSYDKVRLLIEHPHTYREWNIVGRCDVPGFFYLESQFRLN
Ga0310910_110766762	3300031946	Soil	MSKRTKRRKNAKSQQLAKPDGIATGRKFAQSYDKVRLLIEHPHTYREWNIVGRCDVPGFFTWNPNSG
Ga0306922_123412581	3300032001	Soil	MSKRTREKKSAKPQQLAKPDEMPIGQRFARSYGKARLLVEHPHSYREWSIEKDGKRFEV
Ga0310911_108186021	3300032035	Soil	MSKRTREKKSAKPEQLAKPDEISIGRRFAKPYDKARLLIEHPHSYREWNIVERYDVPGFFYLESRFRLNPGEQP
Ga0318577_102339191	3300032091	Soil	MSKRTREEKTQRLEQLAKPDGIATGRKFAQSYGKVRLLIEHPHTYHEWNIVGRCDVPGFFYLESRFRLNP
Ga0311301_106931363	3300032160	Peatlands Soil	MSKRIREKKCAKSQQPAKPDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFFYLE
Ga0307471_1009643741	3300032180	Hardwood Forest Soil	MSKRTREKKGAKSQQLAKPEEISFGRRFAQPYSKARLLIDHPHSYREWNIVGQCDV
Ga0307472_1018405761	3300032205	Hardwood Forest Soil	MSKRTREEKSAKPQQLAKLDAISIGRRFAQPYGKARLLIDHPHSYREWNIVGQCDVPGFSYLESRFRLNPGEQPA
Ga0306920_1034329101	3300032261	Soil	SKRTREKKSAKPQQLAKPDEMPIGQRFARSYGKARLLVEHPHSYREWSIEKDGKRFEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences