NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069107

Metagenome Family F069107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069107
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 41 residues
Representative Sequence AGKVNSADKLYLVIESVRLDTKHSRSSNAPVPADGAGGSGIG
Number of Associated Samples 110
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.61 %
% of genes near scaffold ends (potentially truncated) 92.74 %
% of genes from short scaffolds (< 2000 bps) 94.35 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(10.484 % of family members)
Environment Ontology (ENVO) Unclassified
(29.032 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.742 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00589Phage_integrase 3.23
PF00665rve 1.61
PF01695IstB_IS21 1.61
PF12850Metallophos_2 1.61
PF00072Response_reg 0.81
PF08843AbiEii 0.81
PF14294DUF4372 0.81
PF04101Glyco_tran_28_C 0.81
PF01329Pterin_4a 0.81
PF05016ParE_toxin 0.81
PF04405ScdA_N 0.81
PF00027cNMP_binding 0.81
PF13620CarboxypepD_reg 0.81
PF13701DDE_Tnp_1_4 0.81
PF01609DDE_Tnp_1 0.81
PF07238PilZ 0.81
PF09722Xre_MbcA_ParS_C 0.81
PF08388GIIM 0.81
PF13744HTH_37 0.81
PF01120Alpha_L_fucos 0.81
PF13414TPR_11 0.81
PF13631Cytochrom_B_N_2 0.81
PF01381HTH_3 0.81
PF00146NADHdh 0.81
PF00295Glyco_hydro_28 0.81
PF00069Pkinase 0.81
PF00690Cation_ATPase_N 0.81
PF07311Dodecin 0.81
PF01527HTH_Tnp_1 0.81
PF13817DDE_Tnp_IS66_C 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.23
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 1.61
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 1.61
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 1.61
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 1.61
COG4584TransposaseMobilome: prophages, transposons [X] 1.61
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 0.81
COG0650Formate hydrogenlyase subunit HyfCEnergy production and conversion [C] 0.81
COG1005NADH:ubiquinone oxidoreductase subunit 1 (chain H)Energy production and conversion [C] 0.81
COG2154Pterin-4a-carbinolamine dehydrataseCoenzyme transport and metabolism [H] 0.81
COG2253Predicted nucleotidyltransferase component of viral defense systemDefense mechanisms [V] 0.81
COG2846Iron-sulfur cluster repair protein YtfE, RIC family, contains ScdAN and hemerythrin domainsPosttranslational modification, protein turnover, chaperones [O] 0.81
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.81
COG3293TransposaseMobilome: prophages, transposons [X] 0.81
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 0.81
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.81
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 0.81
COG5421TransposaseMobilome: prophages, transposons [X] 0.81
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.81
COG5434PolygalacturonaseCarbohydrate transport and metabolism [G] 0.81
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573004|GZGWRS402G4F1FNot Available570Open in IMG/M
3300001213|JGIcombinedJ13530_104066273All Organisms → cellular organisms → Bacteria3899Open in IMG/M
3300004080|Ga0062385_10687158All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005166|Ga0066674_10029340All Organisms → cellular organisms → Bacteria2424Open in IMG/M
3300005176|Ga0066679_10088162Not Available1866Open in IMG/M
3300005334|Ga0068869_101961382Not Available525Open in IMG/M
3300005366|Ga0070659_100206689All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1617Open in IMG/M
3300005451|Ga0066681_10547130Not Available715Open in IMG/M
3300005534|Ga0070735_10861441Not Available533Open in IMG/M
3300005575|Ga0066702_10111587All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1577Open in IMG/M
3300005602|Ga0070762_11157396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076534Open in IMG/M
3300005764|Ga0066903_101928221Not Available1132Open in IMG/M
3300005841|Ga0068863_100558921All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300005944|Ga0066788_10138140All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300006032|Ga0066696_10398918All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300006046|Ga0066652_101517782All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300006047|Ga0075024_100882189All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300006050|Ga0075028_100395994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales789Open in IMG/M
3300006059|Ga0075017_100384974All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1050Open in IMG/M
3300006176|Ga0070765_100168414Not Available1968Open in IMG/M
3300006796|Ga0066665_10371161Not Available1173Open in IMG/M
3300006796|Ga0066665_11174994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300009098|Ga0105245_12960063Not Available526Open in IMG/M
3300009137|Ga0066709_103806455Not Available548Open in IMG/M
3300009168|Ga0105104_10384908All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300009174|Ga0105241_10180222All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300009503|Ga0123519_10432227All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300009632|Ga0116102_1055492Not Available1231Open in IMG/M
3300009643|Ga0116110_1066458All Organisms → cellular organisms → Bacteria → Proteobacteria1266Open in IMG/M
3300009645|Ga0116106_1213640Not Available614Open in IMG/M
3300009645|Ga0116106_1230100All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009646|Ga0116132_1102323Not Available881Open in IMG/M
3300009709|Ga0116227_11413023All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300010046|Ga0126384_10300073Not Available1320Open in IMG/M
3300010047|Ga0126382_10780980Not Available812Open in IMG/M
3300010048|Ga0126373_11328411Not Available785Open in IMG/M
3300010361|Ga0126378_11599583Not Available740Open in IMG/M
3300010364|Ga0134066_10157618All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300010366|Ga0126379_10857737Not Available1009Open in IMG/M
3300010366|Ga0126379_13722117Not Available511Open in IMG/M
3300010376|Ga0126381_104870904Not Available516Open in IMG/M
3300010379|Ga0136449_100999248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1347Open in IMG/M
3300010379|Ga0136449_101667838All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300011409|Ga0137323_1020643Not Available1474Open in IMG/M
3300012203|Ga0137399_11454360Not Available572Open in IMG/M
3300012350|Ga0137372_11141841All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4531Open in IMG/M
3300012469|Ga0150984_113398980Not Available509Open in IMG/M
3300013297|Ga0157378_12788039Not Available541Open in IMG/M
3300014151|Ga0181539_1003210All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales15328Open in IMG/M
3300014156|Ga0181518_10224962Not Available964Open in IMG/M
3300014159|Ga0181530_10656874Not Available509Open in IMG/M
3300014199|Ga0181535_10831850All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300014200|Ga0181526_11001252All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300014492|Ga0182013_10712792Not Available501Open in IMG/M
3300014493|Ga0182016_10664619Not Available588Open in IMG/M
3300014499|Ga0182012_11013373Not Available521Open in IMG/M
3300014501|Ga0182024_12835850All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300014502|Ga0182021_11578949Not Available790Open in IMG/M
3300014502|Ga0182021_11735691All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300014502|Ga0182021_13780308All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300014654|Ga0181525_10635644Not Available596Open in IMG/M
3300014839|Ga0182027_10594434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1191Open in IMG/M
3300015259|Ga0180085_1218004Not Available566Open in IMG/M
3300015372|Ga0132256_101691187All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300016270|Ga0182036_10170147All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1570Open in IMG/M
3300016371|Ga0182034_11571270All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300016387|Ga0182040_11745672All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300017787|Ga0183260_10816170Not Available583Open in IMG/M
3300017929|Ga0187849_1077310All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300017933|Ga0187801_10007825Not Available3448Open in IMG/M
3300017938|Ga0187854_10306894All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300017938|Ga0187854_10489336Not Available511Open in IMG/M
3300017961|Ga0187778_10641228Not Available715Open in IMG/M
3300017975|Ga0187782_11081000Not Available625Open in IMG/M
3300017975|Ga0187782_11540399All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae524Open in IMG/M
3300018021|Ga0187882_1370041All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300018023|Ga0187889_10312335All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300018024|Ga0187881_10314921Not Available648Open in IMG/M
3300018030|Ga0187869_10257345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium845Open in IMG/M
3300018030|Ga0187869_10626035All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300018034|Ga0187863_10070521Not Available1974Open in IMG/M
3300018037|Ga0187883_10550791Not Available596Open in IMG/M
3300018042|Ga0187871_10274715All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300018047|Ga0187859_10151569Not Available1229Open in IMG/M
3300018047|Ga0187859_10391386Not Available762Open in IMG/M
3300018062|Ga0187784_10654274All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300018062|Ga0187784_11414566Not Available551Open in IMG/M
3300019787|Ga0182031_1439132All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA32491Open in IMG/M
3300021476|Ga0187846_10039618All Organisms → cellular organisms → Bacteria2108Open in IMG/M
3300025453|Ga0208455_1096285Not Available567Open in IMG/M
3300025494|Ga0207928_1050363All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300025928|Ga0207700_11432037All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300028536|Ga0137415_10629379Not Available885Open in IMG/M
3300028906|Ga0308309_10571851Not Available980Open in IMG/M
3300029915|Ga0311358_10633256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium800Open in IMG/M
3300029939|Ga0311328_10237504Not Available1384Open in IMG/M
3300029956|Ga0302150_10140939Not Available921Open in IMG/M
3300029990|Ga0311336_10291324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium1350Open in IMG/M
3300029999|Ga0311339_10899496All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium840Open in IMG/M
3300030058|Ga0302179_10163397All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300030058|Ga0302179_10302526Not Available704Open in IMG/M
3300030506|Ga0302194_10261302Not Available695Open in IMG/M
3300030617|Ga0311356_11789283Not Available548Open in IMG/M
3300031236|Ga0302324_100728868All Organisms → cellular organisms → Bacteria → Proteobacteria1394Open in IMG/M
3300031236|Ga0302324_100928947All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300031236|Ga0302324_101230736Not Available994Open in IMG/M
3300031247|Ga0265340_10528001All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300031525|Ga0302326_13238736All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4548Open in IMG/M
3300031708|Ga0310686_108719244Not Available518Open in IMG/M
3300031754|Ga0307475_10931398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300031770|Ga0318521_10679393All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300031792|Ga0318529_10328724Not Available712Open in IMG/M
3300031912|Ga0306921_10910612Not Available998Open in IMG/M
3300032160|Ga0311301_11046976All Organisms → cellular organisms → Bacteria → Acidobacteria1071Open in IMG/M
3300032342|Ga0315286_10344006All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300032805|Ga0335078_11489509Not Available757Open in IMG/M
3300032829|Ga0335070_11067083Not Available744Open in IMG/M
3300032892|Ga0335081_10912946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1034Open in IMG/M
3300033004|Ga0335084_11552426Not Available654Open in IMG/M
3300033158|Ga0335077_11463501Not Available655Open in IMG/M
3300033402|Ga0326728_10009644All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales23103Open in IMG/M
3300033405|Ga0326727_10789948Not Available735Open in IMG/M
3300033822|Ga0334828_162155Not Available510Open in IMG/M
3300034090|Ga0326723_0312828Not Available706Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland10.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.45%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.65%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.84%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.03%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.23%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen3.23%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog3.23%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.23%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.42%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.42%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.61%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.81%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.81%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.81%
Hot SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.81%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.81%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009503Hot spring microbial communities from Yellowstone National Park - Yellowstone National Park OP-RAMG-02EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014151Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300025453Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025494Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029956Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2EnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030506Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033822Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FG2_073454702189573004Grass SoilPNVAVAGQVNSSDRICLVIDTVRPDTKHAGGSTVPDLADGAGGSGMG
JGIcombinedJ13530_10406627373300001213WetlandCVAGKVNSADKLYLVIDSVRPDTKHLRDSNAPALADGAGALPID*
Ga0062385_1068715813300004080Bog Forest SoilVSGKVNSADKLYLVIESVKRDSKHSRDSAVPASADGAGGSVVK*
Ga0066674_1002934033300005166SoilCVAGKVNIADKLYLVIELVRLDTSHAQCSSVPVPADGAGGLPLD*
Ga0066679_1008816233300005176SoilVSGKVNTADQLYLVIESVKMGTQHSRCSITPVPADGAGGSLMK*
Ga0068869_10196138223300005334Miscanthus RhizosphereKVNSADKLYLVIESIKPDRKQGIASIAPVHPDGAGGRFMC*
Ga0070659_10020668923300005366Corn RhizosphereVSGKVNSADKLYLVVESVKPDNKRSPRSTAPVPADGAGGSAIR*
Ga0066681_1054713013300005451SoilVNSADQLYLVIETVKRDTKHAWSSNAHTHVDGAEGSTMF*
Ga0070735_1086144113300005534Surface SoilVAGKVNSVNTLYLVIESVKLDTRHQRLSTAPAPADGAGGYGVP*
Ga0066702_1011158733300005575SoilDKLYLVIESVRVDTKYARSSTAPDPVDSVGGLSLP*
Ga0070762_1115739623300005602SoilGKVNSADKLYLVVESVRLDTRQRRVSKVPIPAEGAGGSTLR*
Ga0066903_10192822133300005764Tropical Forest SoilCVAGKVNSVNTLYLVVESVKLDTKHEVLSTAPVRPDGAGG*
Ga0068863_10055892113300005841Switchgrass RhizosphereSADKLYLVVESVRLDTKHSRVSNAHAPADGAGRSPIG*
Ga0066788_1013814013300005944SoilRLYLVIESVRPDTRHPRPSNVPAPADGAGGSPIG*
Ga0066696_1039891813300006032SoilYCIAGKVNSADRLYLVIESVRPDTKHLRESNAPAHGDGAGGSLIE*
Ga0066652_10151778223300006046SoilADKLYLVIELVRLDTSHAQCSSVPVPADGAGGLPLD*
Ga0075024_10088218913300006047WatershedsVNSADQLYLVIESVKRDTKHAWSSTAHAPVDGAEDSTMF*
Ga0075028_10039599413300006050WatershedsCIAGKVNSADKLYLVIESVRPDTTHARCANVPPHVDGAGGSLIE*
Ga0075017_10038497413300006059WatershedsVNSADKLYLVIESVRPDTKHARRSNAPAHFDGAGGSLIE*
Ga0070765_10016841413300006176SoilGKVNSVNTLYLVIESVKLDTKHQRLSTTPVPADGAGGYGVP*
Ga0066665_1037116113300006796SoilKLYLVIESVRQDTKHCRVSTAPVPANGAGGSTVR*
Ga0066665_1117499413300006796SoilKVNSADKLYLVIESVKTDSKHSWDSIASALADGAEGNRLS*
Ga0105245_1296006313300009098Miscanthus RhizosphereAGKVNSTDKLYLVIESVRLDTKRRRSSTELSPADGAGGPAVP*
Ga0066709_10380645513300009137Grasslands SoilVNRADQLYLVIESVKRDTKHAWSSNAHTHVDGAEGSTMF*
Ga0105104_1038490813300009168Freshwater SedimentKVTSAGRLYLVIESVRPDTKHLRDSNAPAHVDGAGGSLIE*
Ga0105241_1018022213300009174Corn RhizosphereSADKLYLVVESVKPDNKRSPRSTAPVPADGAGGSAIR*
Ga0123519_1043222713300009503Hot SpringSQAQLIRPGMAYCVAGKVNSADKPYLVIESVRPDMKPRRVSEAPVPAEGAGGLQTR*
Ga0116102_105549223300009632PeatlandSADKLYLAIESVQWDTKHMWSSTAHAPVDGEEGSAMF*
Ga0116110_106645813300009643PeatlandDKLYLVIESVRPDTKHAQFSIVPAPADGAGGHPMA*
Ga0116106_121364013300009645PeatlandVAGKVNSADKLYLVIESVRLDTKHSRSSNAPVPADGAGGSGIG*
Ga0116106_123010023300009645PeatlandAYCVAGKVNSVHTLYLVIESVKRDTKFERHSTTLVPIDGAGGDGVR*
Ga0116132_110232313300009646PeatlandKVNSADKLYLVIESVKRDTKHSRDSAVPASADGAGGLVVK*
Ga0116227_1141302313300009709Host-AssociatedDKLYLVIESVRLDTKHIRSSTVPDPADGAGGLPLG*
Ga0126384_1030007313300010046Tropical Forest SoilTLYLVIESVKLDTKHGWSSIVPAPADGAGGSTVR*
Ga0126382_1078098013300010047Tropical Forest SoilADKLYLVIESIKMDPKHSQYSTTPAPADCAGGSLMK*
Ga0126373_1132841113300010048Tropical Forest SoilNSADKLYLVIESVKPDTKHPWPSTAPAPSDGAED*
Ga0126378_1159958323300010361Tropical Forest SoilKVNSADKLYLVIESVKRDAKHTWSSTAHAPVDGAEGSAMF*
Ga0134066_1015761813300010364Grasslands SoilNTLYLVIESVKRDTKHERLSTTPIPADGAGGYGMR*
Ga0126379_1085773713300010366Tropical Forest SoilKVNSADKLYLVLEAVKPDTKHGRPSTAPVPVDGAGG*
Ga0126379_1372211723300010366Tropical Forest SoilSGKFNSADKLYLVIESVKPVRKHPWPSTAPAPSDGAEE*
Ga0126381_10487090413300010376Tropical Forest SoilGKVNSADKLYLVIESIKPDMKHPWSSTSLAPSDGAEE*
Ga0136449_10099924813300010379Peatlands SoilKLYLVIESVRLDSKHCRVSTAHVPAEGAGGSTVR*
Ga0136449_10166783813300010379Peatlands SoilCVAGKVNSADKLYLVIESVRPDTKHARSSTAFVPPDGAGEDPLA*
Ga0137323_102064333300011409SoilPQQLYCVFGKVNSADKLYLVMESVKIDTKHLLPSTPPTPPDGAGS*
Ga0137399_1145436013300012203Vadose Zone SoilKVNSADKLYLVIESVKMDTKHSRCSTTPAPADGAGGSLMK*
Ga0137372_1114184113300012350Vadose Zone SoilSADKLYLVIESVKRDTKHSWSSTAHDPADGAEGSSMF*
Ga0150984_11339898023300012469Avena Fatua RhizosphereLVPGKVNSADNLYLVIESVRLDTKPRRVSTAPVPADDAGGPTVR*
Ga0157378_1278803913300013297Miscanthus RhizosphereKVNSADRLFLVIDSVRPDTKHARRSTVPAPADGAGGSAIG*
Ga0181539_100321033300014151BogVNSADKLYLVIESVKRDTKHAWSSTAHAPVDGAEDNVMI*
Ga0181518_1022496243300014156BogDMLYLVIESVRLDTKHSLASIAPVPADGAGGSGIG*
Ga0181530_1065687413300014159BogSKVNSADKLYLVIESVRLDTKLRRPPTAPVPADGAGGPAVR*
Ga0181535_1083185013300014199BogKVNSADKFYLVIESVKPDAKHNRSSIAPAPVEGAES*
Ga0181526_1100125223300014200BogVNSADKLYLVIESVKPDAKHNRSSMVPVPVDGAERQS*
Ga0182013_1071279223300014492BogYSVAGKVNSADKLYLVIESVRLDTKHSRSSNALAPADGAGGSGIG*
Ga0182016_1066461923300014493BogDKLYLVLESVRLDTKHSLASTAPVPADGAGGSGIG*
Ga0182012_1101337313300014499BogNSADKLYLVIESVRLDTKHIRSSTVPDPADGAGGLPLA*
Ga0182024_1283585013300014501PermafrostVNSADKLYLVIESVRPDTRHSRSSTVPVPVAGAGGLPIA*
Ga0182021_1157894913300014502FenKFYLVIESVRPDTKHARSSTPPLLTDGAGENPLA*
Ga0182021_1173569123300014502FenAGDANSSDELYLVIELVRPDTKRLRDSTVPAHVDGAGGSPTD*
Ga0182021_1378030813300014502FenAGKLYLVIESVRPDTKHARCANAPAPVDGAGGSLIE*
Ga0181525_1063564413300014654BogKLYLVIESVRLDTKHIRSSTVPDPADGVGISSLAPGACRSA*
Ga0182027_1059443413300014839FenGVAYSVAGKVNSADKLYLVLEAVRPDTKHSRHSNAHAPVDGAGGSPIG*
Ga0180085_121800413300015259SoilYSVAGKVNSADKLYLVIESVRLDTKHSRSSNALVLADGAGGSGIG*
Ga0132256_10169118713300015372Arabidopsis RhizosphereVAYCVPGKVNSADKLYLVIESVRLDKKRRRVSTASVPADGAGCPTVR*
Ga0182036_1017014733300016270SoilKVNSADKLYLVIESLKRDTKHQRDSAEPAAADGAGGSVMES
Ga0182034_1157127023300016371SoilLIQPNVVYCVAGKVNSADRLYLVIYSVRPDTKHSRRSTVPTLTEGAGGSPTG
Ga0182040_1174567213300016387SoilDVAYCIAGKVNSADKLYLVIESVRLDTKRRRLSSSPVPVDGAGGPAVL
Ga0183260_1081617013300017787Polar Desert SandGKVNSADKLYLVIESVRPDTRHSRSSTLPVLAAGAGGLPIA
Ga0187849_107731043300017929PeatlandVNSADKLYLVIESVRPDTKHARNSNAPVRADGAGGSRMA
Ga0187801_1000782513300017933Freshwater SedimentNSADKLYLVIESVELNTKHARPSIVPAPADGAGGLPLD
Ga0187854_1030689413300017938PeatlandVNSADKFYLVIESVRPDTKHARSSIVPAPADGAGGHPMA
Ga0187854_1048933613300017938PeatlandAGKVNSADKLYLVIESVRLDTKHSRSSNAPVPADGAGGSGIG
Ga0187778_1064122813300017961Tropical PeatlandSYYCVSGKVNSADKLYLVMESVKPDAKHNRASNIAALPDGAGGLP
Ga0187782_1108100013300017975Tropical PeatlandGTLYLVIESVKPDTKHERLSISPVPTDGAGGSGMR
Ga0187782_1154039913300017975Tropical PeatlandKVNSADKLYLVIESVKRDTKHTSGSAVPAAAAGAGGSVVK
Ga0187882_137004113300018021PeatlandLVAGKVNSADKLYLVLESVRPDTKHLRSSNAPTLADGAGGSGIG
Ga0187889_1031233513300018023PeatlandLRPGVAYLVAGKVNSADKLYLVLESVRPDTKHLRSSNAPTLADGAGGSGIG
Ga0187881_1031492113300018024PeatlandKVNSADKFYLVIESVRPDTKHARSSTVPLPSDGAGENPLA
Ga0187869_1025734523300018030PeatlandADKFYLVIESVRPDTKHARSSTAPLPSDGAGENPLA
Ga0187869_1062603523300018030PeatlandCIAGKVNSADKLYLVIESVRPDTKHARCSNAPALVDGAGGSLIE
Ga0187863_1007052113300018034PeatlandSADKLYLVIESIKPDTKHGRCSTVPAPAGGAGGSSMA
Ga0187883_1055079123300018037PeatlandKAQLISSDQAYCIAGKVNSADKLYLVVESVRPDTKHERCSNTPAHVDGAGGSIIE
Ga0187871_1027471523300018042PeatlandCMAGKVNSADKLYLVIESVRPDTKHARSSIAPAPVDGAGGSIIE
Ga0187859_1015156913300018047PeatlandVSGKVNSADKLYLVIESVKPDAKHNRSSMIPVPVDGAGK
Ga0187859_1039138623300018047PeatlandQLISSDQAYCIAGKVNSADKLYLVVESVRPDTKHERCSNTPAHVDGAGGSLIE
Ga0187784_1065427413300018062Tropical PeatlandKVNSADKLYLVIESVRPDTKHARSSNVPIPADGAGENPVA
Ga0187784_1141456613300018062Tropical PeatlandGKVNSADKLYLVIESVRPDTKHARFSNVPADGAGENPVA
Ga0182031_143913233300019787BogVAGKVNSADKFYLVIESVRPDTKHARPSTSPPPSDGAGENPLA
Ga0187846_1003961843300021476BiofilmKVNSADKLYLVIESVKLDSKHARPSTDLAPADGAGGWPMR
Ga0208455_109628513300025453PeatlandSADKLYLAIESVQWDTKHMWSSTAHAPVDGEEGSAMF
Ga0207928_105036313300025494Arctic Peat SoilVAYSVAGKVNSADKLYLVIESVRLDTKHSQHSNAHAPADGAGGSPIG
Ga0207700_1143203713300025928Corn, Switchgrass And Miscanthus RhizosphereYYCVSGKVNSADKLYLVMESVKVDTKHPRPSTVPTPADDAGGRPMV
Ga0137415_1062937923300028536Vadose Zone SoilAAGKVNSVNTLYLVIESVKPDTKHERLSTTPVPTDGAGSYRVR
Ga0308309_1057185133300028906SoilGKVNSVNTLYLVIESVKLDTKHQRLSTTPVPADGAGGYGVP
Ga0311358_1063325623300029915BogKSLLLRPGVAYWVAGKVNSADKLYLVLESVRLDTKHSRHSNAHAPVDGAGGSPIG
Ga0311328_1023750413300029939BogYRVAGKVNSADKLYLVIESVHLDTKHIRSSTTVPDPADGSGGLPLP
Ga0302150_1014093913300029956BogDKLYLVIESVRLDTKHIRHSTVPDPADGAGGLPLA
Ga0311336_1029132413300029990FenMAYCIAGKVNSADRLYLVIESVRPDTKHLRDSKAPAHVDGAGGSLIE
Ga0311339_1089949623300029999PalsaVAGKVNSADKLYLVIESVKRDTQHVWSSTALAPVDGAEDSTVL
Ga0302179_1016339713300030058PalsaSSDELHLVIESVLPDARQARCSNVPVPADGAGGSGIG
Ga0302179_1030252613300030058PalsaDEFYLAIESVKRDTKHMWSSTAHAPVGGAEGSAMF
Ga0302194_1026130223300030506BogKVNSADKLYLVLESVRLDTKHSLASTAPVPADGAGGSGIG
Ga0311356_1178928313300030617PalsaGIAGRVNSSDELHLVIESVLPDARQARCSNVPVPADGAGGSGIG
Ga0302324_10072886813300031236PalsaSGKVNSADKLYLVVESVKPDTKHSSPSNAPVPTDGAGGSSMR
Ga0302324_10092894713300031236PalsaCVAGKVNSADKLYLVIDSVRPDTKHARRSSVPVPAEGAGGSHMG
Ga0302324_10123073613300031236PalsaVAGKVNSAGTLYLVIESVKPDTKHERLSTTPVSADGAGGSSVG
Ga0265340_1052800113300031247RhizosphereYSVAGKVNSADKLYLVLESVRLDTKHLRSSNAPALADGAGGTGIG
Ga0302326_1323873613300031525PalsaNSADKLYLVVESVRLDTRQRRVSKVPIPADGAGGSTLR
Ga0310686_10871924413300031708SoilCVAGKVNSADKLYLVIESVRQDTQRRRVSTTPVPADGAGGIDMR
Ga0307475_1093139813300031754Hardwood Forest SoilSADKLYLVIESVRPDAKHHRSSIAPVPADGAGGSAMV
Ga0318521_1067939313300031770SoilVAGKVNSADKLYLVIEAVHLDTKRRPSSNAPVPADGAGGSTVR
Ga0318529_1032872413300031792SoilAGKVNSADKLYLVLESVRLDTKHPRVSNAHAPDDGAGGSPIG
Ga0306921_1091061213300031912SoilSGKVNSADKLYLVVESVKPDTKHKAVSNAPVPIDGAERRPMR
Ga0311301_1104697623300032160Peatlands SoilDKLYLVIESVRPDTKHARSSTAFVPPDGAGEDPLA
Ga0315286_1034400613300032342SedimentAYSVAGKVNSADKLYLVLESVRPDTKHSRSSNAPVPVDGAGGSPIG
Ga0335078_1148950923300032805SoilVNSADKLYLVVELVRLDTKHRRVSTALVPAEGAGGSTLR
Ga0335070_1106708313300032829SoilSADKLYLVIESVRLDMKARRGSSAPVPADGAGGPTVR
Ga0335081_1091294633300032892SoilIPPDKAYCIAGKVNSADRLYLVIESVRPDTKHLRDSNAPAHVDGAGRSLIE
Ga0335084_1155242613300033004SoilVAGKVNSADRLYLVIESVRLDTKHRRASTTPILADGAGGSAVR
Ga0335077_1146350113300033158SoilCVSGKVNSADKLYLVMESVKPDAKHDRGSNAHAAVDGAGGSS
Ga0326728_1000964483300033402Peat SoilVNSADKLYLVIESVKRDTKHAWSSTAHAPVDGAEDNVMI
Ga0326727_1078994813300033405Peat SoilSADKLYLVIESVKPDAKHSRSSSAPVPVDGAESSS
Ga0334828_162155_346_4893300033822SoilVAYSVAGKVNSADRLYLVIESVRLDTKHSRVSNAHAPADGAGGLPIG
Ga0326723_0312828_242_3613300034090Peat SoilMFGKVNSADKLYLVIESVKIDTKHLLLSKLPIPSDGAGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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