NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069113

Metagenome / Metatranscriptome Family F069113

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069113
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 80 residues
Representative Sequence MVVEVGPEIEQLVFQICRRPEQHVIQILASKGADEPFHEGMGQGNVGDGLDFCHLQNPQIGLPLVEPIERIV
Number of Associated Samples 109
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.39 %
% of genes near scaffold ends (potentially truncated) 81.45 %
% of genes from short scaffolds (< 2000 bps) 83.06 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.355 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.968 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.935 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 0.00%    Coil/Unstructured: 80.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00571CBS 2.42
PF13407Peripla_BP_4 2.42
PF03928HbpS-like 1.61
PF04255DUF433 0.81
PF00196GerE 0.81
PF05977MFS_3 0.81
PF12796Ank_2 0.81
PF00486Trans_reg_C 0.81
PF13305TetR_C_33 0.81
PF04434SWIM 0.81
PF09990DUF2231 0.81
PF09239Topo-VIb_trans 0.81
PF04389Peptidase_M28 0.81
PF00589Phage_integrase 0.81
PF01850PIN 0.81
PF13655RVT_N 0.81
PF07642BBP2 0.81
PF00691OmpA 0.81
PF13649Methyltransf_25 0.81
PF09952AbiEi_2 0.81
PF12704MacB_PCD 0.81
PF08241Methyltransf_11 0.81
PF13676TIR_2 0.81
PF12006DUF3500 0.81
PF04014MazE_antitoxin 0.81
PF07366SnoaL 0.81
PF06262Zincin_1 0.81
PF13495Phage_int_SAM_4 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1389DNA topoisomerase VI, subunit BReplication, recombination and repair [L] 0.81
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.81
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.81
COG3824Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domainPosttranslational modification, protein turnover, chaperones [O] 0.81
COG4279Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 0.81
COG4715Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 0.81
COG5431Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domainGeneral function prediction only [R] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.35 %
UnclassifiedrootN/A5.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10005866All Organisms → cellular organisms → Bacteria3739Open in IMG/M
3300005166|Ga0066674_10242871All Organisms → cellular organisms → Bacteria → Acidobacteria855Open in IMG/M
3300005167|Ga0066672_10103005All Organisms → cellular organisms → Bacteria → Acidobacteria1744Open in IMG/M
3300005167|Ga0066672_10550381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300005176|Ga0066679_10768969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300005179|Ga0066684_10126016All Organisms → cellular organisms → Bacteria → Acidobacteria1600Open in IMG/M
3300005184|Ga0066671_10003863All Organisms → cellular organisms → Bacteria → Acidobacteria5264Open in IMG/M
3300005445|Ga0070708_101628341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300005451|Ga0066681_10006174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5580Open in IMG/M
3300005554|Ga0066661_10887081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300005557|Ga0066704_10661139All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300005568|Ga0066703_10068640All Organisms → cellular organisms → Bacteria → Acidobacteria2026Open in IMG/M
3300005568|Ga0066703_10737594All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005952|Ga0080026_10042295All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300006162|Ga0075030_101490643All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300006176|Ga0070765_100032631All Organisms → cellular organisms → Bacteria4073Open in IMG/M
3300006796|Ga0066665_10122239All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1941Open in IMG/M
3300006796|Ga0066665_11240452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300006797|Ga0066659_10945802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300006797|Ga0066659_11486347All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300006806|Ga0079220_11492072All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300010341|Ga0074045_10141036Not Available1643Open in IMG/M
3300010343|Ga0074044_10886978Not Available583Open in IMG/M
3300010361|Ga0126378_10344069All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300010376|Ga0126381_100337897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2077Open in IMG/M
3300011269|Ga0137392_10838572All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300011270|Ga0137391_10187469All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300012210|Ga0137378_11620019All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300012349|Ga0137387_10097787All Organisms → cellular organisms → Bacteria2041Open in IMG/M
3300012917|Ga0137395_10036161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3019Open in IMG/M
3300012931|Ga0153915_13346185Not Available520Open in IMG/M
3300014150|Ga0134081_10145489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300014166|Ga0134079_10162455All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300014829|Ga0120104_1108812All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300016319|Ga0182033_12035221All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300016387|Ga0182040_10575145All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300016404|Ga0182037_12143898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300016422|Ga0182039_11364143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300017822|Ga0187802_10026642All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300017822|Ga0187802_10215562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium740Open in IMG/M
3300017932|Ga0187814_10402958All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300017936|Ga0187821_10489963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300017943|Ga0187819_10610493All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300017975|Ga0187782_11553424All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300017995|Ga0187816_10504928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300018001|Ga0187815_10287324All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300018006|Ga0187804_10365558All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300018007|Ga0187805_10253635All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300018012|Ga0187810_10272095All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300018086|Ga0187769_10443050Not Available978Open in IMG/M
3300018431|Ga0066655_10840809Not Available625Open in IMG/M
3300018468|Ga0066662_12601953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300019787|Ga0182031_1016307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300019888|Ga0193751_1063590All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300020022|Ga0193733_1134653All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300020583|Ga0210401_10000433All Organisms → cellular organisms → Bacteria51597Open in IMG/M
3300020583|Ga0210401_10005886All Organisms → cellular organisms → Bacteria → Acidobacteria12551Open in IMG/M
3300020583|Ga0210401_10037042All Organisms → cellular organisms → Bacteria4633Open in IMG/M
3300020583|Ga0210401_10442662Not Available1162Open in IMG/M
3300021088|Ga0210404_10066361All Organisms → cellular organisms → Bacteria1742Open in IMG/M
3300021088|Ga0210404_10581294Not Available636Open in IMG/M
3300021168|Ga0210406_11109847All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300021171|Ga0210405_10344352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1176Open in IMG/M
3300021178|Ga0210408_10088936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2424Open in IMG/M
3300021403|Ga0210397_10064886All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300021405|Ga0210387_10115848All Organisms → cellular organisms → Bacteria2258Open in IMG/M
3300021405|Ga0210387_10162975All Organisms → cellular organisms → Bacteria1916Open in IMG/M
3300021406|Ga0210386_10748031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium841Open in IMG/M
3300021475|Ga0210392_11468994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300021478|Ga0210402_10481822All Organisms → cellular organisms → Bacteria → Acidobacteria1152Open in IMG/M
3300021478|Ga0210402_10685486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium947Open in IMG/M
3300022731|Ga0224563_1000807All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300022734|Ga0224571_112237All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300024271|Ga0224564_1046718All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300025320|Ga0209171_10378435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300025928|Ga0207700_10152716All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1910Open in IMG/M
3300025929|Ga0207664_10723291All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300026277|Ga0209350_1006593All Organisms → cellular organisms → Bacteria3958Open in IMG/M
3300026317|Ga0209154_1089454All Organisms → cellular organisms → Bacteria → Acidobacteria1321Open in IMG/M
3300026323|Ga0209472_1040691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2054Open in IMG/M
3300026323|Ga0209472_1063547All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300026326|Ga0209801_1190648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium832Open in IMG/M
3300026330|Ga0209473_1165332All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300026331|Ga0209267_1315460All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300026333|Ga0209158_1106403All Organisms → cellular organisms → Bacteria → Acidobacteria1064Open in IMG/M
3300026335|Ga0209804_1001970All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae12787Open in IMG/M
3300026342|Ga0209057_1070018All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300026343|Ga0209159_1011143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5395Open in IMG/M
3300026467|Ga0257154_1003917All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300026494|Ga0257159_1079451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300026540|Ga0209376_1215859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium856Open in IMG/M
3300026695|Ga0208840_101311All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300027439|Ga0209332_1020813All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300027605|Ga0209329_1141659All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300027842|Ga0209580_10182680All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300027862|Ga0209701_10686357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300027882|Ga0209590_10636838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300027910|Ga0209583_10675648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300028906|Ga0308309_11412959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300029636|Ga0222749_10385960All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300029907|Ga0311329_11010425All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300030813|Ga0265750_1064457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300030862|Ga0265753_1079910All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300031090|Ga0265760_10219973All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300031090|Ga0265760_10385662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300031545|Ga0318541_10320105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium865Open in IMG/M
3300031573|Ga0310915_11148229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300031679|Ga0318561_10475270All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300031708|Ga0310686_104275880All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1790Open in IMG/M
3300031718|Ga0307474_11002154All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300031754|Ga0307475_10103758All Organisms → cellular organisms → Bacteria → Acidobacteria2222Open in IMG/M
3300031820|Ga0307473_10338738All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300031879|Ga0306919_10955189All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300031880|Ga0318544_10040986All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300031890|Ga0306925_10687360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300031890|Ga0306925_11392258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300031912|Ga0306921_11582766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300031912|Ga0306921_12411936All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300031962|Ga0307479_10008977All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium9255Open in IMG/M
3300032001|Ga0306922_12238504All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300032060|Ga0318505_10481907All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300032067|Ga0318524_10463944All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300032076|Ga0306924_10376083All Organisms → cellular organisms → Bacteria → Acidobacteria1627Open in IMG/M
3300032090|Ga0318518_10348850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium760Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment8.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.42%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.42%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.61%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.81%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.81%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.81%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022731Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4EnvironmentalOpen in IMG/M
3300022734Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3Host-AssociatedOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026695Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN391 (SPAdes)EnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1000586663300003505Forest SoilMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGADEPFDKRVRQGNAGDALDFCHLQNPQIGCHWWNL*
Ga0066674_1024287143300005166SoilMVVEIGPEIEQLVFQICRRPEQRVIQVLAPKGADEPFHEWMRQENVGDGLDFRRLQYPQIGLPLVEPVEWIVVGTDVLRHPALPSNGAVED
Ga0066672_1010300513300005167SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPLVEPIKRIV
Ga0066672_1055038113300005167SoilMVVEVVPELEQFIFEICGRPEQLVIQILASNRADEPFDERMRQGNAGDALDFCHLQNAQIGLPLMELIKRIVVGAEVLRHPELP
Ga0066679_1076896913300005176SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPLVEPIKRIVIGAEEVRHSALPSNGAVEHPTKCDTID
Ga0066684_1012601633300005179SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPLVEPIK
Ga0066671_1000386343300005184SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPLVEPIKRIVIGAEEVRHSALPSNGAVEHPTKCDTIDHSR
Ga0070708_10162834113300005445Corn, Switchgrass And Miscanthus RhizosphereMGAMVVEVGPEIEQFILEICALPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFRHLRDPQIGLPSVELIERIMVGAEVLWQPALTSNGAVKHATECD
Ga0066681_1000617463300005451SoilMVVEVGPEIEQLVFEICRCPEQRVIQVLASKGADEPFHEWMGQGNVGDGLDSCHLQYPQIGLPLVEPIKRIVVGA
Ga0066661_1088708123300005554SoilMVVEIGPEIEQLVFQICRGPEQHAIQILASKGADKPFHERMGQGNVGDGLDFRHLQYPQIGLPSMEPIKWIVVGTEVLRHPELLS
Ga0066704_1066113923300005557SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLP
Ga0066703_1006864043300005568SoilMRAMVVEVVPELEQFIFEICGRPEQLVIQILASNRADEPFDERMRQGNAGDALDFCHLQNAQIGLPLMELIKRIVVGAEVLRHPELP
Ga0066703_1073759413300005568SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLPLVE
Ga0080026_1004229513300005952Permafrost SoilMVVEVGPEIQQFILEICTRPEQHVIQIFASNGANEPFHEGMRQGNIGDGLDFCHLQDPQIGLPLVELIERIMVGAEVLWQPALTS
Ga0075030_10149064323300006162WatershedsMVVVVVPEIEQFIFQIDSRPEQRVIQIFASNGADEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIK
Ga0070765_10003263173300006176SoilMVVEVGPEIAQFILQICTRPEQPVIQIFASNGANEPFHEGMRLGNVGDGLDFCHLQDPQIGLPWVELIE
Ga0066665_1012223923300006796SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLPLVEPIKRIVVG
Ga0066665_1124045213300006796SoilMVVEVGPEIEQLVFEVCRRPEQHVIQVFPPQGADQPFYEWMGQGDVGDGLDFYRLQYPQIGLPLVEPIERIIVRAEVLRHPALPTNGAVEHPTECGTID
Ga0066659_1094580213300006797SoilMVVEVVPELKEFIFEICGRPEQRVIQILASNRADEPFDERMRKGNAGDALDFCHLQNPQIGLPLMELIKRIVVGAEVLRHPE
Ga0066659_1148634713300006797SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPL
Ga0079220_1149207213300006806Agricultural SoilMVVEVGPEIEQLVFEVCRRPEQQVIQVFPPQGADQPFHEWMGQGHVRDRLDLLQLQYPQIGLPLVEPIHVDHCQS*
Ga0074045_1014103623300010341Bog Forest SoilMRAMVVEVGSEIEQFVFEIFGRPEQHVIQILASNGADWPFHERMGQGNVGDGLDFCHLQYSQIGLPLVEPIERIVV*
Ga0074044_1088697813300010343Bog Forest SoilMRAMVVEVGSEIEQFVFEIFGRPEQHVIQILASNGADWPFHERMGQGNVGDGLDFCHLQNSQIGLPLVEPIERIVV*
Ga0126378_1034406933300010361Tropical Forest SoilMGAMVVEVGPEIKQLVLEIRRSPEQNVIQILPSNGADQPFHERMRQWNVRDGLDFCHVQYPEVGLPLVEPIKRIVIGA
Ga0126381_10033789713300010376Tropical Forest SoilMRAMVVEVVPELKQFIFEICGRPEQRVIQILASNRADEPFDERMRQGNAGDALDFCHLQNAQI
Ga0137392_1083857213300011269Vadose Zone SoilMRAIVVEVGPEIEKLVFEICSGPEQHAIQILASKRADQPFHKRMGQGNIGDGLDFRHLQYPQIGLPSVEPIKWIVVGAKVLRHPELLSNGAVEHPTESDTI
Ga0137391_1018746913300011270Vadose Zone SoilMGAMVVEVGPEIEQFILQICTRPEQHVIQIFASNGAHEPFHEGMRQGNVGDGLDFCHLQDPQIGLPWVELIERIMVGAEVRWQPALTSNGAVEHAL*
Ga0137378_1162001913300012210Vadose Zone SoilMRAMVVEVVPELEQFIFEICGRPEQRVIQILASNRADEPFDERMRKGNAGDALDFCHLQNPQIGLP
Ga0137387_1009778733300012349Vadose Zone SoilMRAMVVEVGPEIEELVFEVCRRPEQHVIQVFPPQGADQPFHEWMGQGDVGDGLDFYHLQYPQIGLPLVEPIER
Ga0137395_1003616113300012917Vadose Zone SoilMRAMVVEVGPEIEQLVFEICSGPEQHAIQILASKGADQPFHERMGQGNVGDGPDFRHLQYPQIGLPSVEPIKWIVVGADLLRHPALLSNGAVEHP
Ga0153915_1334618513300012931Freshwater WetlandsMRAMIVEVGSEIEQLVFEIRARPEQRAIQTLPAYRSDKPLHEGMGQGSVGDGLDFGHLRDPQIGLPFILTKPGIAWDCVTN*
Ga0134081_1014548913300014150Grasslands SoilMRAMVVEVGTEIEQFVFEICLRPEQYAIQILPSKGTDQPFDERRGQGNVGDGLDFCHFQYPQVGLPLVKPIKRIVVGA
Ga0134079_1016245513300014166Grasslands SoilMGAMVVEVGPEIEQLVFEVCRRPEQHVIQVFPPQGADQPFYEWMGQGDVGDGLDFYRLQYPQIGLPLVEPIERIIVRAEVLRHPA
Ga0120104_110881213300014829PermafrostMGAMVVKVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIMVGAEVLWQP
Ga0182033_1203522113300016319SoilMVVEVGPEIEQLVFQICRRPEQHVIQILASKGADEPFHEGMGQGNVGDGLDFCHLQNPQIGLPLVEPIERIV
Ga0182040_1057514523300016387SoilMRALVVEVGFEIEQFVFQIYRRPEQHVIQILASKGADEPFHEGMGQGNVGDGLDFCHLQNPQIGLPLVEPIERIVVGAQVIRQPAMPSNGAVEHPTECDS
Ga0182037_1214389813300016404SoilMVVEVGPENEQLVFEVCRRPEQQVIQVFPPQRADQPFHERMGQGNVGDGLDLCHLQYPQIGLPLVEPVERIIVGAEVVRH
Ga0182039_1136414313300016422SoilMVVEVGPEIERFVFQICRRPEQHVIQILASQGADEPFHEGMGQGNVGDGLDFCHLQNPQIGLPLVEPKKRIVVH
Ga0187802_1002664223300017822Freshwater SedimentMVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHERMRQGNVGDGLDFCHFQDPQIGLPWWNL
Ga0187802_1021556223300017822Freshwater SedimentMRAMVVEVGSEFEQLVFEICRRPEQRVIQILASKGADEPFHERMGQGSVGDGLDFCHLQYPQIGLPLVEPIKGIVVGAEV
Ga0187814_1040295813300017932Freshwater SedimentMVIEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHERMRQGNVGDGLDFCHFQDPQIGLPLVELIKRIMVGAEVL
Ga0187821_1048996313300017936Freshwater SedimentMVVEVGPEIEQLVFEICRRPEQDVIQVFTPQDADQPFHEWMGQGNVGYGLDFGQLQYTQIGLPLVEPIKWIVVGAQVLRHPALPSNGTVEHPTEGDTIDGS
Ga0187819_1061049313300017943Freshwater SedimentMRAMVVEVGSEFEQLVFEICRRPEQRVIQILASKGADEPFHERMGQGSVGDGLDFCHLQYPQIGLPLVEPIKGIVVG
Ga0187782_1155342413300017975Tropical PeatlandMVVEVGPEIEQLAFKIYSRPEQRVIQILASKGADEPFHEWRGQGNIGDGLDFRHLQYPQMGLPLVEAIK
Ga0187816_1050492813300017995Freshwater SedimentMRAMVVEVGSEFEQLAFQICRRPEQRVIQILASKGADEPFHERMGQGNVGDGLDFCHLQYPQIGLPLAEPIKGIVVGAEVLRHPAFLSNGA
Ga0187815_1028732413300018001Freshwater SedimentMRAMVVEVGSEFEQLAFQICRRPEHRAIQILASKGADQPFHKRMGQGNVGDGLDFCHLQDPQIGLPLLEPIERVV
Ga0187804_1036555823300018006Freshwater SedimentMVVKVGPEIGQLVFEICRRPEQQVIQILSAKGADEPFHEWMGQGNVGYGLDFRQLQYTQIGLP
Ga0187805_1025363523300018007Freshwater SedimentMVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHERMRQGNVGDGLDFCHLQYPQIGLPLVEPIKGIVVGAEVLRHPALLSNGVVEHPTK
Ga0187810_1027209523300018012Freshwater SedimentMRAMVVEVGSEFEQLAFQICRRPEHRAIQILASKGADQPFHKRMGQGNVGDGLDFCHLQYPQIGLPLAEPIKGIVVGAEVLRHPAFLSNGAGEHPTKRATVARFRKTAEP
Ga0187769_1044305023300018086Tropical PeatlandMVVEVGLEIEQLVFKICRCPEQRAIQILASKGADEPFHERMGQGNGGKGLDFCHLQYPQMGLPLVEPI
Ga0066655_1084080923300018431Grasslands SoilMVLEVGPEIERLVFEICRCPEQHAIQILASKGADQPFHERMGQGNVDGLDFCHLQHPLIGLHWWNR
Ga0066662_1260195313300018468Grasslands SoilMVVEVGPEIEQLVFEICSGPEQHAIQILASKRANQPFREWMGQENVGDGLDFRHLQYAQIGLPLVEPIEWIVVGTEVLRHPALPSNGA
Ga0182031_101630713300019787BogMGAVVVVVSLEIEQFVLQICARPEQCMVQTLASNRADEPFDEGMRPRNVGDGLDFCHFQYPQIGLPLVEPIKRIVVRAQILRQPAMPSKGVVE
Ga0193751_106359033300019888SoilMVVEVGPEIEQFILQICTRPEQHVIQIFASNGAHEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIMVGAEVLWQPALTSNGAVEHAL
Ga0193733_113465313300020022SoilMVVEVDPEIEQLVFEICSGPEQHVIQILTAKGANQPFHERMGQGNVGDGLDFRHLQYPQIGLPLVEPIKWIVVGADVVRHPALASNGAVE
Ga0210401_1000043343300020583SoilMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGADEPFDKRVRQGNAGDALDFCHLQNPQIGCHWWNL
Ga0210401_10005886123300020583SoilMVVEVGPEIEQFILEICARPEQHVIQIFASNGANEPFHEGMRLGNVGDGLDFCHLQDPQIGLPWVELIERIMVGAEVLWQPALTRMARLNMRPRATPST
Ga0210401_1003704223300020583SoilMVVEVGPEIQQFILEICARPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCSPPGSADWLAMGGTYREDHGRS
Ga0210401_1044266223300020583SoilMRAMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGVDEPFDERVRQGNAGDALDFCHLQNPQMWRPTLANCFPSA
Ga0210404_1006636133300021088SoilMVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIVVGAEVLWQPALISNGAVEHAL
Ga0210404_1058129413300021088SoilMRAIVVEVSPEIEQFVFEIYRRPEQHVIQILASQGADWPFHEWMGQGNIGDGLAFCHLLYPQIGLPL
Ga0210406_1110984713300021168SoilMVIVIGPEIEQFILEICTRPEHHMIQIFASNGADEPFHEGMRQGNVGDGLDFCYLQDPQIGLPLVELTKRIVVG
Ga0210405_1034435233300021171SoilMVVEVGPEIEQLVFEICRRPEQQVIQILSAKGADEPFHEWMGQGNIGDGLDFRQLQYAQIGLPLVEPIEWIVVGAQVLRRPALPSNGTVEHPTEGDTID
Ga0210408_1008893633300021178SoilMVGAVGSEIEQLVFEIFRRSEPPMIQIPASKGAGWPFHEWMGQGNVRDGLDLCRLQHPQIGLPLLEPVEWVVVGAEVLGHLEWPLRGAVEHPTECN
Ga0210397_1006488613300021403SoilVMRAMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGADEPFDKRVRQGNAGDALDFCHLQNPQIGCHWWNL
Ga0210387_1011584813300021405SoilMGAMVIVVGPEIEQFILQICTRPEHHMIQIFASNGADEPFHEGMRQGNVGDGLDFCYLQDPQIGLP
Ga0210387_1016297523300021405SoilMGAMVVEVGPEIAQFILEICARPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCSPPGSADWLAMGGTYREDHGRS
Ga0210386_1074803123300021406SoilMVVEVGLEIEQFILQICTRPEQHVIQIFASNGANEPFHEGVRPGNVGDGLDFCHLQDPQIGLPWVELIERIMVGAEVL
Ga0210392_1146899413300021475SoilMVVVVSSEIEQFILQICTRPEHHMIQIFASNGADEPFHEGMRQGNVGDGLDFCYLQDPQIGLPLVELIKRIVVGAEVL
Ga0210402_1048182223300021478SoilMAAMVVVIGLEMQQFIFQICTRPEQRMIQIFASNRTDEPFHERMGQGNVGDGFDFCHLQDPQIGLPLVKLIKRIVVGAEVVRHAA
Ga0210402_1068548613300021478SoilMVVKVGPEIEQLVFEICGRPEQQVIQILSAKGADEPFYEWMGHGNVGDGLDFRQLQYTQIGLPLVETIKWIIVGAQVLRHLA
Ga0224563_100080733300022731SoilMVVEVGPEIQQFILQICTRPEQQVIQIFASNGANEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVGTYREDHGRS
Ga0224571_11223713300022734RhizosphereMVVEVGPEIQQFILQICTRPEQHVIQIFASNGANEPFHEGMRPGNVGDGLDFCHLQDPQIGLPLVELIERIMVGA
Ga0224564_104671813300024271SoilMVVVGPEVQQFIFQIYTRPEQRMIQIFASNGTDEPFHERMGQGNVGDALDFSRLQDPQIGLPLVKLIKRIVVGAEVLWQPALPSNGAVEHATECDS
Ga0209171_1037843513300025320Iron-Sulfur Acid SpringMVIVVGPEIEQSILQICTRPEHHMIQIFASNGADELFHEGMRQGNVGDGLDFCYLQDPQIGLPLVELIKRIVV
Ga0207700_1015271613300025928Corn, Switchgrass And Miscanthus RhizosphereMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGADEPFDERVRQGNAGDALDFCRLQNPQIGLPLVELI
Ga0207664_1072329123300025929Agricultural SoilMVVEVVPELKEFIFEICGRPEQRLIQTLASNRTDEPFGERMRKGNAGDALDFCHLQNPQIGLPLMELIKRIVVGAEVLRNPE
Ga0209350_100659333300026277Grasslands SoilMVVEVGPEIEQLVFEVCRRPEQHVIQVFPPQGADQPFDERMGQGNVGDGLDFCHFQYPQVGLPLVKPIKRIVVGA
Ga0209154_108945433300026317SoilMVVEVGPEIEQLVLEIRRSPEQHTIQILPSNGADQPCHEGMRQWNVGDGLDFCHVQYPEVGLPLVEPIKRIVIGAEEVRHSALPSNGAVEHPTKCDTIDHS
Ga0209472_104069113300026323SoilMVVEVGPEIEQLVFEICRCPEQRVIQVLASKGADEPFHEWMGQGNVGDGLDSCHLQYPQIGLPLVEPIKRIVVGAD
Ga0209472_106354723300026323SoilMVVKVGPEIEQLVFEICCRPKQRMIQIVASNGADQPFHKWMGQGNIGDGLDLCHLQYSQIGLPLVEPVKRIVVGAKVLRQPVLPSNGAVEHPA
Ga0209801_119064833300026326SoilMMVVVVPEIEQFIFQIDSRPEQRVIQTFASNGADEPFHEGVRLGNVGDSLDFCHLQDPQIGLPLVKLIKRIVV
Ga0209473_116533213300026330SoilMVVKVGPEIEQLVFEICCRPKQRMIQIVASNGADQPFHKWMGQGNIGDGLDLCHLQYSQIGLPLVEPVKRIVVGAK
Ga0209267_131546013300026331SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLPLVEPIKRIVVGTEVLRHPELPSNGAVEHPTECDTIDLPA
Ga0209158_110640323300026333SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLPLVEPIKRIVVGTEVLRHPELPSNGAVEHPTECDTIDLSRM
Ga0209804_100197013300026335SoilMRAMVVEVGPEIEQLVFEVCRRPEQHVIEVFPPQGADLPFHEWMGQGDVGDGLDFYHLQYPQIGLPLVEPIERI
Ga0209057_107001813300026342SoilMVVKVGPEIEQLVFEICCRPKQRMIQILASNGADQPFHKWMGQGDVGDGLDLCHLQYSQIGLPLVEPVKRI
Ga0209159_101114313300026343SoilMVVKVGPEIEQLVFEICCRPKQRMIQIVASNGADQPFHKWMGQGNIGDGLDLCHLQYSQIGLPLVEPVKRIVVGAKVLRQPVLPSNGAVEH
Ga0257154_100391713300026467SoilMVVELGPEIQQFILEICTRPEQHVIQIFASNGTNEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIMVGVEVLWPRLIMRLSATPSTVPAWTPKPMIRRVY
Ga0257159_107945123300026494SoilMMVVVVPEIEQFIFQIDSRPEQRVIQTFASNGADEPFHQGMRQGNVGDSLDFCHLQDPQIGLPLVKLIKRIVVGAEVRWQ
Ga0209376_121585913300026540SoilMAVKVRPEIEQFVFEVCCRPKKHLIQILASDGAVLPFHKRMGQGNVGDRLGFCHLQYPQVGLPLVEPIKRIVVGTEVLRHPELPSNGAVEHPTESDTIDL
Ga0208840_10131123300026695SoilMMVVVVPEIEQFIFQIDSRPEQRVIQTFASNGADEPFHEGMRQGNVGDSLDFCHLQDPQIGLP
Ga0209332_102081313300027439Forest SoilMGAMVVVIGLEIQQFIFQICTRPEQRMIQIFASNRTDEPFHERMGQGNVGDGFDFCHLQDPQIGLPLVKLIKRIVVGAEVLWQPALPSKWPG
Ga0209329_114165913300027605Forest SoilMVVEVGLEIQQFILEICAHPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIKRIVV
Ga0209580_1018268023300027842Surface SoilMVVEVVPEIEQFIFEIYSRPEQRVIQTLASNGADEPFDERVRQGNTGDALDFCHLQNPQIGLPLVELIKRIVVGAEVLRHPELPAKG
Ga0209701_1068635713300027862Vadose Zone SoilMMVVVVPEIEQFIFQIDSRPEQRVIQTFASNGADEPFHEGMRQGNVGDSLDFCHLQDPQIGLPLVKLIKRIVVGAEIRWQPALPANGSVEHATE
Ga0209590_1063683813300027882Vadose Zone SoilMVVEVGPEIEQLVFEICSGPEQHAIQILASKGADQPFHERMGQGNVGDGLDFCRLQYLQIGLPLVEPIKRIVVGADVLRHPELPSNG
Ga0209583_1067564813300027910WatershedsMVVEVGPEIQQFILEICARPEQHVIQIFASNGANEPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIMVG
Ga0308309_1141295923300028906SoilMVVVVSSEIEQFILQICTRPEQHVIQIFASQRADEPFHEGMRQGNVGDGLDFSHIQDPQIGLPLVERIKGIVVGAEVRWQPALT
Ga0222749_1038596013300029636SoilMVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHEGMRLANVGDGLDFCHLQDPQIGLPLVELIERI
Ga0311329_1101042513300029907BogMGAVVVVVSLEIEQFVLQICARPEQCMVQTLASNRADEPFDEGMRPRNVGDGLDFCHFQYPQIGLPLVEPIKRIVVRAQILRQPAMPSKGVVEHATEC
Ga0265750_106445713300030813SoilMVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPFHEGMSQGNVGDGLDFSHIQDPQIGLPLVERIKGIVVGAEVL
Ga0265753_107991013300030862SoilMVVEVGPEIEQFILQICTRPEQHGIQIFASNGANEPFHEGMRLGNVGDGLDFCHLQDPQIGLPLVELIKRIVVG
Ga0265760_1021997323300031090SoilMVIVVGPEIKQFILQICTRPEHHKIQIFASNGADEPFHEGMRQGNVGDGLDFCYLQDPQIGLPLVELTERIMVR
Ga0265760_1038566213300031090SoilMGALVVEVGPEIEQFILQICTRPEQHVIQIFASNGANEPLHERMRQGNAGDGLDFCHFQNPQSGLPLMELIKRIMVGAQVLRQPALTSNSVV
Ga0318541_1032010523300031545SoilMVVEVGPEIEQLVFEVCRRPEQPVLQVFAPQRADQPFHEWMGQGNVGDGLDLCHLQYPQIGLPLVEPVERIIVGAEVV
Ga0310915_1114822913300031573SoilMVVEVGPEIEQLVFEVCRRPEQPVLQVFAPQRADQPFHEWMGQGNVGDGLDLCHLQYPQIGLPLVEPVERIIVGAEVVRHPALPSNG
Ga0318561_1047527013300031679SoilMVVKVGSEIEQLVFGICHSPKQNVIQILPSNGADQPFHERMRQWNVRYGLYFCHFQYPQVGLPLVEPIKR
Ga0310686_10427588013300031708SoilMGALVVEVGPEIQQFILEICTRPEQHVIQRFASNGANDPFHEGMRQGNVGDGLDFCHLQDPQIGLPLVELIERIMVGAEVVWQPA
Ga0307474_1100215413300031718Hardwood Forest SoilMVIVVGPEIEQFILEICTRPEHHMIQIFASNGADEPFHEGMRQGNVGDGLDFCYLQDPQIGLPLVELIKRIVVGAEVLWQ
Ga0307475_1010375813300031754Hardwood Forest SoilMVVEVVPELKEFIFEICGRPEQRVIQTLASNRTDEPFGERMRKGNAGDALDFCHLQNPQIGLPLMELIKRIVVGA
Ga0307473_1033873833300031820Hardwood Forest SoilMVVEVGPEIEQLVFEVCRRPEQQVIQALPPQGADQPFHEWMGQGHVRDRLDLLQLQYPQIGLPLVKPIQWIIVRAEVLRQPELASNGAVEHPTE
Ga0306919_1095518923300031879SoilMVVEVGPEIERFVFQICRRPEQHVIQILASQGADEPFHEGMGQGNVGDGLDFCHLQNPQSGLPLVEPIERI
Ga0318544_1004098633300031880SoilMVVEVSPEIEQFVFQICSRPEQHVIQILASNGADQPFHEGMGQRNVGDGLDFCHLQNPQSGLPLVEPIERIVVRAQVLRQPAMPSKGAVEHATECD
Ga0306925_1068736013300031890SoilMVVEVGPEIERFVFQICRRPEQHVIQILASQGADEPFHEGMGQGNVGDGLDFCHLQNPQMGLPLVEPIERVVVRAQVVRQPAM
Ga0306925_1139225813300031890SoilMVVEVGPEIEQLVFQICRRPEQHVIQILASKGADEPFHEGMGQGNIGDGLDFCHLQNPQIGLPLVEPIERIVVRAQ
Ga0306921_1158276613300031912SoilMVVKVGSEIEQLVFEICHSPKQNVIQILPSNGADQPFHERMRQWNVRYGLYFCHFQYPQVGLPLVEPIKRIVFGAEV
Ga0306921_1241193613300031912SoilMVVEVGPEIEQFVFEICRRPEQHVIQILASKGADEPFHERMGQGNVGDGLDFCHLQNPQIGLRVDAANSIRVFGG
Ga0307479_1000897713300031962Hardwood Forest SoilMVVEVVPELEQFIFEIWGRPEQRVIQILASNRADEPFDERMRQGNAGDALDFCHLQNAQ
Ga0306922_1223850413300032001SoilMRPMVVKVGSEIEQLVFEICHSPKQNVIQILPSNGADQPFHERMRQWNVRYGLYFCHFQYPQVGLPLVE
Ga0318505_1048190713300032060SoilMREMVVEVGPEIEQLVFEVCRRPEQHVIQVFPPQRADQPFHEWMGQGNVGDGLDLCHLQYPQIGLPLV
Ga0318524_1046394423300032067SoilMVVEVSPEIEQFVFQICSRPEQHVIQILASNGADQPFHEGMGQRNVGDGLDFCHLQNPQSGLPLVEPI
Ga0306924_1037608323300032076SoilMVVEVGPEIERFVFQICRRPEQHVIQILASQGADEPFHEGMGQGNVGDGLDFCHLQNPQIGLPLVEPIERIVVGAEAV
Ga0318518_1034885013300032090SoilMVVEVGPEIEQLVFEVCRRPEQPVLQVFAPQRADQPFHEWMGQGNVGDGLDLCHLQYPQIGLPLVEPVERIMVG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.