Metagenome / Metatranscriptome Family F069143

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069143
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	53 residues
Representative Sequence	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVV
Number of Associated Samples	112
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.22 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	90.32 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.387 % of family members)
Environment Ontology (ENVO)	Unclassified (29.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.79% β-sheet: 32.89% Coil/Unstructured: 51.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01523	PmbA_TldD	56.45
PF01726	LexA_DNA_bind	1.61
PF12704	MacB_PCD	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	56.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.26 %
Unclassified	root	N/A	4.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.26 %
Unclassified	root	N/A	4.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	81.45 %
Unclassified	root	N/A	4.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.45 %
Unclassified	root	N/A	4.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.45 %
Unclassified	root	N/A	4.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10235932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300001686\|C688J18823_10305779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300001686\|C688J18823_10757129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300002244\|JGI24742J22300_10051146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300002568\|C688J35102_118457174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300003997\|Ga0055466_10191541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300004153\|Ga0063455_100446950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300005166\|Ga0066674_10538611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300005179\|Ga0066684_10804395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005180\|Ga0066685_11099320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005337\|Ga0070682_100786058	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005406\|Ga0070703_10242161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300005440\|Ga0070705_100077201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2033	Open in IMG/M
3300005457\|Ga0070662_100656806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300005458\|Ga0070681_11401373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300005471\|Ga0070698_100418930	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005545\|Ga0070695_101177033	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005546\|Ga0070696_100549489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300005546\|Ga0070696_101137153	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005553\|Ga0066695_10119044	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300005555\|Ga0066692_10609285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300005556\|Ga0066707_10419079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300005559\|Ga0066700_10725117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300005560\|Ga0066670_10721556	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005614\|Ga0068856_102477720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005713\|Ga0066905_101069277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005844\|Ga0068862_100297549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1484	Open in IMG/M
3300006175\|Ga0070712_100977837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300006575\|Ga0074053_11816261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300006796\|Ga0066665_10197601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1558	Open in IMG/M
3300006800\|Ga0066660_10545153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300006871\|Ga0075434_100683958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300006894\|Ga0079215_10629742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300006904\|Ga0075424_102164082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300009012\|Ga0066710_103153886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300009090\|Ga0099827_10634955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300009147\|Ga0114129_10280689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2225	Open in IMG/M
3300010045\|Ga0126311_10226671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1376	Open in IMG/M
3300010325\|Ga0134064_10256187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300010325\|Ga0134064_10382098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300010335\|Ga0134063_10694173	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010999\|Ga0138505_100050764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300011003\|Ga0138514_100096864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300012096\|Ga0137389_10321860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1311	Open in IMG/M
3300012198\|Ga0137364_10229049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1368	Open in IMG/M
3300012199\|Ga0137383_10610255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300012200\|Ga0137382_10574974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300012210\|Ga0137378_11679747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012351\|Ga0137386_10463298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300012354\|Ga0137366_10165307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1662	Open in IMG/M
3300012355\|Ga0137369_10354912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300012355\|Ga0137369_10519862	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300012359\|Ga0137385_11192264	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012359\|Ga0137385_11340985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300012360\|Ga0137375_11318720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300012487\|Ga0157321_1009047	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300012507\|Ga0157342_1005426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300012898\|Ga0157293_10181508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300012960\|Ga0164301_11651848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300013296\|Ga0157374_11853044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300013308\|Ga0157375_11402577	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300014154\|Ga0134075_10243188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300014157\|Ga0134078_10133494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300014157\|Ga0134078_10293465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300015359\|Ga0134085_10568657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300015372\|Ga0132256_103535575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018052\|Ga0184638_1223472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300018061\|Ga0184619_10018925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2812	Open in IMG/M
3300018482\|Ga0066669_12077068	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300020004\|Ga0193755_1035354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1648	Open in IMG/M
3300021078\|Ga0210381_10149493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300022534\|Ga0224452_1025300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300022756\|Ga0222622_11254767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300024330\|Ga0137417_1415677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6585	Open in IMG/M
3300025321\|Ga0207656_10466501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300025914\|Ga0207671_10462649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300025924\|Ga0207694_10470524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300025939\|Ga0207665_11490640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300026078\|Ga0207702_10881333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300026300\|Ga0209027_1030816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2031	Open in IMG/M
3300026325\|Ga0209152_10370130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300026327\|Ga0209266_1302138	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026330\|Ga0209473_1329866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300026528\|Ga0209378_1193638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300026550\|Ga0209474_10305332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300026756\|Ga0207577_102789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300026901\|Ga0207487_106427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300027846\|Ga0209180_10172275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300027882\|Ga0209590_10671421	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300028708\|Ga0307295_10118799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300028710\|Ga0307322_10170143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300028715\|Ga0307313_10058883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300028744\|Ga0307318_10144828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300028768\|Ga0307280_10273740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300028782\|Ga0307306_10025921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1366	Open in IMG/M
3300028802\|Ga0307503_10162436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300028803\|Ga0307281_10139308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300028807\|Ga0307305_10129572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1166	Open in IMG/M
3300028807\|Ga0307305_10314564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300028810\|Ga0307294_10398413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300028814\|Ga0307302_10152610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300028819\|Ga0307296_10818683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300028828\|Ga0307312_10226035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300028828\|Ga0307312_10307578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300028828\|Ga0307312_10864583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300028878\|Ga0307278_10025114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2739	Open in IMG/M
3300028878\|Ga0307278_10260594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300028884\|Ga0307308_10192079	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300028885\|Ga0307304_10051925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1520	Open in IMG/M
3300031184\|Ga0307499_10068282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300031226\|Ga0307497_10038943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1603	Open in IMG/M
3300031366\|Ga0307506_10149750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300031366\|Ga0307506_10341787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300032002\|Ga0307416_103778873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300032828\|Ga0335080_11117686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300033158\|Ga0335077_11848417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300033412\|Ga0310810_10452594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1299	Open in IMG/M
3300033475\|Ga0310811_10624845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.29%
Host-Associated	Host-Associated	13.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.65%
Plants	Host-Associated → Plants	13.71%
Aquatic	Environmental → Aquatic	5.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Sediment	Environmental → Aquatic → Sediment	3.23%
Freshwater	Environmental → Aquatic → Freshwater	1.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.61%
Marine	Environmental → Aquatic → Marine	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.52%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026756	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K2-12 (SPAdes)	Environmental	Open in IMG/M
3300026901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-10 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_102359321	3300001305	Soil	LSALDVARLALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVVTLR
C688J18823_103057792	3300001686	Soil	VSALDIARAALEAAGGDAEAVAHSEYSGLARFAGSEVHQPTLIENLVVTLRVLQGNR
C688J18823_107571292	3300001686	Soil	LEVAHAALEASGEEGEAVALAERSGLARFAESEVHQPTLIDNVLVTLRVLRDGRAG
JGI24742J22300_100511462	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVAT
C688J35102_1184571742	3300002568	Soil	VNALDVAGAAVAAAEGDEAEAVVLSEHSGLARFAGREVHQPTLIDNVVVTLRVVRD
Ga0055466_101915412	3300003997	Natural And Restored Wetlands	MSALELARRALAAAGEHAEVVVQSERSGLARFAASEVHQPTLIENAVVQVRVLLPDGRGG
Ga0063455_1004469502	3300004153	Soil	MSALDIARAALAAADGEAEAVAHSERSGLARFAGSEVHQPTLIENAVVTLRVV
Ga0066674_105386111	3300005166	Soil	VTALEVAKAALDTVEGEAEAVAHVEHSGLARFAGSEVHQPTLIENA
Ga0066684_108043952	3300005179	Soil	MSTLDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIEN
Ga0066685_110993202	3300005180	Soil	MKARDVAQAALDAAGGDAEAIAQVESSGLARFAGSEVHQPTL
Ga0070682_1007860582	3300005337	Corn Rhizosphere	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPT
Ga0070703_102421612	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQPTLI
Ga0070705_1000772011	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATT
Ga0070662_1006568062	3300005457	Corn Rhizosphere	VSALELARAALAAVDGDAEAVAHSEQSGLARFAGSEVHQPTLIENAVVTLRVVRD
Ga0070681_114013731	3300005458	Corn Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQP
Ga0070698_1004189302	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTALEVARAALNAAGGEAEAVAHSERSGLARFAGSEVHQPTLVENVVVTLRVVRGDRV
Ga0070695_1011770331	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VSALEVARAAIEAASGEAEAVAQVESSGLARFAGSEVHQPTLIDNTVVTLTVVRDGRTGM
Ga0070696_1005494892	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSTLDIARALLARADGDVEALVHSERSGLARFASSEVHQPTLIENVGVTVRIVLG
Ga0070696_1011371532	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VNAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATTNKID
Ga0066695_101190442	3300005553	Soil	LTARELAEAAVNVAGGEAEAIAEVESSGLARFAGSEVHQPTLIENTVVTLRVVLNARTG
Ga0066692_106092852	3300005555	Soil	LTRALEVGRAALAATEGEAEVVAHAETSGLARFASSEVHQPTLIDNVV
Ga0066707_104190791	3300005556	Soil	VSALEIARAALETVDGEAEAVAHAERSGLARFAGSEVHQPTLIENLVVTLR
Ga0066700_107251171	3300005559	Soil	VSALEIARAALETVDGEAEAVAHAERSGLARFAGSEVHQPTLIENLV
Ga0066700_110048712	3300005559	Soil	LTDSLEVAAAALRAAEGDEAEATVLVERSGLARFADRE
Ga0066670_107215562	3300005560	Soil	VTRALDVARRALEATTGEAEAVAQAETSGLARFAASEVHQPTLIDNVVVTLRIVRDGRTG
Ga0068856_1024777201	3300005614	Corn Rhizosphere	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVV
Ga0066905_1010692771	3300005713	Tropical Forest Soil	VTDALELAGAALAAAAGDEAEAVVQAEHSGLARFAGSEVHQPTLVEDTVVQL
Ga0068862_1002975491	3300005844	Switchgrass Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQPTLIEN
Ga0070712_1009778371	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNALEVAKAALETVDGEAEAVAHVEHSGLARFAGSEVHQPTLIDNA
Ga0074053_118162612	3300006575	Soil	LNAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLR
Ga0079222_124377252	3300006755	Agricultural Soil	VTQALDVARAALEEATGDDAEATVLAESSGLARFAGSEVHQPTLIENVVAALRIFQDGRVGCAITNRV
Ga0066653_102564911	3300006791	Soil	VTRALEVARTALAAADGDAEVVVQAEASGLARFASSEVHQPTLIDNLVVTLRLVRDGRVGVAS
Ga0066665_101976011	3300006796	Soil	LTARELAEAAVNVAGGEAEAIAEVESSGLARFAGSEVHQPT
Ga0066660_105451532	3300006800	Soil	VTSAIEVAHAALAHVEGEAEAVAHMESSGLARFAESEVHQPTLIDNVVVTLRVLHDG
Ga0075434_1006839581	3300006871	Populus Rhizosphere	VSALDVARSALEAAGGDAEAVAHSERSGLARFADSEVHQPTLIENVVVT
Ga0079215_106297422	3300006894	Agricultural Soil	VKALEVARAALAAADGEAEAVAHVERSGLARFAGSEVHQPTLIE
Ga0075424_1021640822	3300006904	Populus Rhizosphere	VSALDVARSALEAAGGDAEAVAHSERSGLARFADSE
Ga0066710_1031538861	3300009012	Grasslands Soil	VSALEIARAALEVAGDEAEAVAHAERSGLVRFAGSEVHQPTLIENLVVTLR
Ga0099827_106349551	3300009090	Vadose Zone Soil	VTSALEVARAALASADGDAEAVAHAESSGLARFADSEVHQPTLIDNVVVTVRV
Ga0114129_102806891	3300009147	Populus Rhizosphere	VNALDLAQAALAAAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMITLRFVHGNRAGV
Ga0126311_102266712	3300010045	Serpentine Soil	VSALEVARAALDAADGDAEAVAHSERSGLARFADSEIHQPTLIE
Ga0134067_104788712	3300010321	Grasslands Soil	VTRALDVARRALEATTGEAEAVAQAETSGLARFAASEVHQPTLIDNVVVTLRVVRNERVGLARTNRV
Ga0134064_102561872	3300010325	Grasslands Soil	VSTLDVARAALGAAGGEAEAVAHSERSGLARFAGSEVHQ
Ga0134064_103820982	3300010325	Grasslands Soil	VTPRALEVARAALEKIDGDADVVAHGESSGLARFASSEVHQPTLI
Ga0134063_106941731	3300010335	Grasslands Soil	VSALPVAQDAIDAAAGDEAEAVVLTERSGLARFAGREVHQPTLIDNV
Ga0138505_1000507642	3300010999	Soil	LKAIDVARAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLR
Ga0138514_1000968641	3300011003	Soil	VSALDVARSALEAAGGDAEAIAHSERSGLARFAESEVHQPTLIENVVVT
Ga0137389_103218602	3300012096	Vadose Zone Soil	VNAIEVAKAALERVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVR
Ga0137364_102290492	3300012198	Vadose Zone Soil	VNALEVAKAALETVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAIVTLRVVRDTRL
Ga0137383_106102552	3300012199	Vadose Zone Soil	VTRALEAARAALAATDGEAEVVAHSETSGLARFASSEVHQPTLIDNVVVTLRVV
Ga0137382_105749742	3300012200	Vadose Zone Soil	VSALEVARAALDAAGGEAEAIAHSERSGLARFAESEVHQP
Ga0137378_116797472	3300012210	Vadose Zone Soil	VNALEVAKAALDTVEGEAEAVAHVEHSGLARFAGSEVHQPTLIEN
Ga0137386_104632982	3300012351	Vadose Zone Soil	MSALEVARAALEAAGADAEAVAHSERSGLARFAGSEVHQPTLIE
Ga0137366_101653072	3300012354	Vadose Zone Soil	VNALELAQAALDMVEGEAEAVAHVEHSGLARFAGSEVHQPTLIE
Ga0137369_103549121	3300012355	Vadose Zone Soil	MSALRVAQAALEAAEGDAEAVTHAEWSGLARFAGSEIHQPTLIENVVVTLRVVRDSRAG
Ga0137369_105198622	3300012355	Vadose Zone Soil	MPESALEVAERALAAVSGDDAAVVVRSERSGLARFAGREVHQPTLIDN
Ga0137385_111922642	3300012359	Vadose Zone Soil	VTWALAVAQAALEAAGEDEAEVVAHVEASGLARFAGSEVHQPTLIADVVATLRVVHDTCVGVATTNRVD
Ga0137385_113409851	3300012359	Vadose Zone Soil	VTSALEIARAALAFADGDAEAVAHAESSGLARFADSE
Ga0137375_113187201	3300012360	Vadose Zone Soil	VSALEIAKAALAATDGEAEAVAHAERSGLARFAGSEVHQPTLIENVVVTLRVVRQKRAGVATTNK
Ga0157321_10090472	3300012487	Arabidopsis Rhizosphere	VTALEIARTAIEAAGGDAEAVAHVERSGLARFAASEIHQ
Ga0157342_10054261	3300012507	Arabidopsis Rhizosphere	MSRALDVAQAALAASGEEGEAVALAERSGLARFAESEVHQPT
Ga0157293_101815081	3300012898	Soil	VNALDVAGAALDAAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTPRVV
Ga0153915_123547542	3300012931	Freshwater Wetlands	VSYALEVAAAAVEAAEGDGAEAVVLTERSGLARFAASDIHQPTLIDNAVATLRIVRDGRVGAAATN
Ga0164301_116518481	3300012960	Soil	VNALDVAKAALETAGGQAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQGNRAGIATTNKIDAPG
Ga0157374_118530441	3300013296	Miscanthus Rhizosphere	VNALDIAKAALETAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAIVTL
Ga0157375_114025772	3300013308	Miscanthus Rhizosphere	MNALDVAQAALDAAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTIRVV
Ga0134075_102431881	3300014154	Grasslands Soil	VNALEVAKAALDTVEGEAEAVAHVEHSGLARFAGSEVHQPTLIENALVTLRVVHDNRVGVATTNKLDA
Ga0134078_101334941	3300014157	Grasslands Soil	VTRALEVARTALAAADGDAEVVVQAEASGLARFASSEVHQPTLIDNLVVT
Ga0134078_102934652	3300014157	Grasslands Soil	VSTLDVARAALGAAGGEAEAVAHSERSGLARFAGSEVHQPTLI
Ga0134085_105686571	3300015359	Grasslands Soil	VSALDVAHAALEAAGGEAEAVAHSERSGLARFASSEVHQPTLIENVV
Ga0132256_1035355752	3300015372	Arabidopsis Rhizosphere	VSALDVAHAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIDNVSVTVRLVRGTRV
Ga0184638_12234721	3300018052	Groundwater Sediment	VNALDVARAALDTAVGEAEAVAHIEHAGLARFAGSEVHQPTLIENAM
Ga0184619_100189255	3300018061	Groundwater Sediment	LKAIDVARAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENA
Ga0066669_120770682	3300018482	Grasslands Soil	VSRALELAHAALDAADGEAEAIAHAETSGLARFASSEVHQPTLISNLSVRLRVVQDGRVGSAATNRVD
Ga0193755_10353542	3300020004	Soil	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTVRVVQDTR
Ga0210381_101494932	3300021078	Groundwater Sediment	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFADSEVHQPTLIENAMVTLRVVQDT
Ga0224452_10253001	3300022534	Groundwater Sediment	VARAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLR
Ga0222622_112547672	3300022756	Groundwater Sediment	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFADSEVHQPTLIENAMVTLRVVQDTRV
Ga0137417_14156774	3300024330	Vadose Zone Soil	VSALEIARAALETVDGEAEAVALAERSGLARFAGSEVHQPTLTRTSS
Ga0207656_104665011	3300025321	Corn Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATTNKID
Ga0207671_104626492	3300025914	Corn Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGS
Ga0207694_104705241	3300025924	Corn Rhizosphere	LNAIEVANAALEVVNGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATTNKI
Ga0207665_114906402	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSALDVARLALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVVTLRVVRG
Ga0207702_108813331	3300026078	Corn Rhizosphere	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVVTLRVVDGNRTGVATTNKV
Ga0209027_10308161	3300026300	Grasslands Soil	MSALDVARAALEAAGGEAEAVAHSERSGLVRFAGSEVHQPTLIENVVVTLRVLHGNRA
Ga0209152_103701301	3300026325	Soil	VSALDVARAALEAAGGEAEAVEHSEHSGLARFAGSEVHQPTLIENLVVTTRVLHGNRA
Ga0209266_13021381	3300026327	Soil	MPESALEIAERVLQAAAGEEAVVVAHVERSGLARFAGAEVHQPTLIDNAVV
Ga0209473_13298661	3300026330	Soil	VSTLDVARAALGAAGGEAEAVAHSERSGLARFAGSEVHQPTLIEN
Ga0209378_11936381	3300026528	Soil	VNALEVAKATLESVEGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMV
Ga0209474_103053322	3300026550	Soil	VTRAIEVARAALEAVDGDAEALGHVETSGLVRFAASEIHQPTLIDNVVVMLRVVRDSKLGIATTNKIDDA
Ga0207577_1027891	3300026756	Soil	VSALELARAALAAVDGDAEAVAHSEQSGLARFAGSE
Ga0207487_1064271	3300026901	Soil	VNALEVARAALDTAGGEAEAVAHVEHSGLARFAGSEVHQPTLIEN
Ga0209180_101722751	3300027846	Vadose Zone Soil	VNAIEVAKAALERVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRV
Ga0209590_106714211	3300027882	Vadose Zone Soil	VTRALEVARAALAATDGDAEVVAHAETSGLARFASS
Ga0307295_101187992	3300028708	Soil	VSALEVARAALDAAGEEAEAIAHSERSGLARFAESEVH
Ga0307322_101701431	3300028710	Soil	VNALEVAKAALDTVEGEAEAVAHVEHSGLARFAGSEVHQPTLIENALVTLRVVHDNRVGVATTNKL
Ga0307313_100588831	3300028715	Soil	VANAALEVVDGEAEAVAHVEHSGLARFADSEVHQPTLIENAMVTLRVVQDTRVGVATTNK
Ga0307318_101448282	3300028744	Soil	VSALEVARAALDAAGEEAEAIAHSERSGLARFAESEVHQPTLIENVVVTLRVV
Ga0307280_102737402	3300028768	Soil	VSALEVARAALNAAGEEAEAIAHSERSGLARFAESEVHQPTLIENVVV
Ga0307306_100259212	3300028782	Soil	VNALDVARTALDAAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTIRVVHGNRVGIATTNKIDPPGLAEV
Ga0307503_101624362	3300028802	Soil	VNALDVAKAALETAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVHGNRAGIATTNRIDAPG
Ga0307281_101393082	3300028803	Soil	MNALDVARAALETAGGEAEAVAHVEHSGLARFAGSE
Ga0307305_101295722	3300028807	Soil	VTALEIAQAALAAVDGGSAEAVAHAERSGLARFASSEVHQPTLIENVVVTLRVVRDSRSGIATTNRIEGDG
Ga0307305_103145641	3300028807	Soil	VNALDVAKAALDTAGGEAEAVAHIEHSGLARFAGSEVHQPTLIENTMVTLRVVHDNRAGVAT
Ga0307294_103984132	3300028810	Soil	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFADSEVHQPTLIENAMVTLRVVQDTRVGV
Ga0307302_101526102	3300028814	Soil	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVAT
Ga0307296_108186832	3300028819	Soil	VNALDVARAALDAAGGEAEAVAHVERSGLVRFADSEVHQPTLIENAIVTLRVVHDTRAG
Ga0307312_102260352	3300028828	Soil	VSALEVARAALNAAGEEAEAIAHSERSGLARFAESEVHQP
Ga0307312_103075782	3300028828	Soil	VNALDVAKAALDAAGGEAEAVAQVERSGLVRFADSEVHQPTLIENAIVTLRVVHDT
Ga0307312_108645832	3300028828	Soil	VSALEIAKAALDTAGGEAEAVAHVEHSGLARFADSEVHQRTLIENVCVTLRVVRGNRAGVATTNKIDAPG
Ga0307278_100251145	3300028878	Soil	VSALDVARTALEAADGDAEAVAHAEWSGLARFAGSEVHQPTLIENVVVTLRVIR
Ga0307278_102605942	3300028878	Soil	VKALDVAKAVLAAADGEAEAVAHVERSGLARFAYSEVHQPTLIENIVVTLRVIRDSRSGVATTNKVDDDGLA
Ga0307308_101920792	3300028884	Soil	VTALEIARAALAAVDGGDAEAVAHAERSGLARFASSEVHQPTLI
Ga0307304_100519251	3300028885	Soil	VSALEVARAALDAAGEEAEAIAHSERSGLARFAESEVHQ
Ga0307499_100682821	3300031184	Soil	LNAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATTNKI
Ga0307497_100389432	3300031226	Soil	VNALDVAKAALETAGGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVHGNRPGIATTNRI
Ga0307506_101497502	3300031366	Soil	VNALEVAKAALETAGGEAEAVAHVEHSGLARFAGSEVHQPTLIE
Ga0307506_103417872	3300031366	Soil	LKAIDVANAALEVVDGEAEAVAHVEHSGLARFAGSEVHQPTLIENAMVTLRVVQDTRVGVATTNKI
Ga0307416_1037788731	3300032002	Rhizosphere	MTAALDVADAALAAAAGEDAEAVVLTERSGLARFAGREVHQP
Ga0335080_111176862	3300032828	Soil	VTGAEAARAALAAADCEAEAVAHAERSGLVRFAGSEVHQPTLIDNLEVTLRVVIDRRVG
Ga0335077_118484171	3300033158	Soil	VTGAEAARAALAAADCEAEAVAHAERSGLVRFAGSEVHQPTLIDNLEVTLRVVIDR
Ga0310810_104525941	3300033412	Soil	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENVVVTLRVVDGNRTG
Ga0310811_106248451	3300033475	Soil	VSALDVARAALEAAGGEAEAVAHSERSGLARFAGSEVHQPTLIENE
Ga0372943_0538171_621_764	3300034268	Soil	VNALEAAGEAIAVASGDEAEAVVLTERSGLARFAERDVHQPTLIDNAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences