Metagenome / Metatranscriptome Family F069225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069225
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	77 residues
Representative Sequence	MRRLTAAGLLPERAGQPVKAWAHISLADLLLLDGGSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDA
Number of Associated Samples	98
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.54 %
% of genes near scaffold ends (potentially truncated)	92.74 %
% of genes from short scaffolds (< 2000 bps)	85.48 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.032 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.290 % of family members)
Environment Ontology (ENVO)	Unclassified (35.484 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.613 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00239	Resolvase	10.48
PF12802	MarR_2	5.65
PF12697	Abhydrolase_6	1.61
PF07508	Recombinase	1.61
PF00857	Isochorismatase	1.61
PF13408	Zn_ribbon_recom	0.81
PF14461	Prok-E2_B	0.81
PF02627	CMD	0.81
PF04471	Mrr_cat	0.81
PF00196	GerE	0.81
PF13432	TPR_16	0.81
PF13359	DDE_Tnp_4	0.81
PF00902	TatC	0.81
PF02720	DUF222	0.81
PF01740	STAS	0.81
PF00872	Transposase_mut	0.81
PF12146	Hydrolase_4	0.81
PF00264	Tyrosinase	0.81
PF00005	ABC_tran	0.81
PF04978	DUF664	0.81
PF13551	HTH_29	0.81
PF08662	eIF2A	0.81
PF03706	LPG_synthase_TM	0.81
PF13424	TPR_12	0.81
PF00069	Pkinase	0.81
PF12840	HTH_20	0.81
PF13676	TIR_2	0.81
PF01568	Molydop_binding	0.81
PF04545	Sigma70_r4	0.81
PF13411	MerR_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	12.10
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	10.48
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.23
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.61
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.61
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.81
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.81
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	45.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.58 %
Unclassified	root	N/A	45.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	16.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.45 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.03 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.03 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.81 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	15.32 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.45 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.03 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.81 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.81 %
Streptosporangiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis	0.81 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Planobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora	14.52 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.45 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3.23 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Allonocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis	0.81 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.81 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.81 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.81 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.81 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.81 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Planobispora rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	14.52 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	3.23 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	2.42 %
Actinoplanes palleronii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	1.61 %
Actinoplanes deccanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes deccanensis	1.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	0.81 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.81 %
Streptomyces lushanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lushanensis	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Acrocarpospora macrocephala	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	0.81 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.81 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Planobispora rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	14.52 %
Nocardioides sp. Kera G14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	3.23 %
Streptomyces sp. 150FB	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 150FB	1.61 %
Actinoplanes palleronii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	1.61 %
Actinoplanes deccanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes deccanensis	1.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.61 %
Micromonospora sp. H61	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. H61	0.81 %
Streptomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	0.81 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.81 %
Microlunatus elymi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	0.81 %
Streptomyces lushanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lushanensis	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Acrocarpospora macrocephala	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	0.81 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.81 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003368\|JGI26340J50214_10133364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	626	Open in IMG/M
3300003368\|JGI26340J50214_10157426	Not Available	567	Open in IMG/M
3300003368\|JGI26340J50214_10182583	Not Available	520	Open in IMG/M
3300005336\|Ga0070680_100931301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005337\|Ga0070682_100368236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1077	Open in IMG/M
3300005434\|Ga0070709_11488098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	549	Open in IMG/M
3300005434\|Ga0070709_11760332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	506	Open in IMG/M
3300005435\|Ga0070714_100173827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes deccanensis	1956	Open in IMG/M
3300005436\|Ga0070713_100219705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1723	Open in IMG/M
3300005439\|Ga0070711_100369255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1157	Open in IMG/M
3300005439\|Ga0070711_102066022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	501	Open in IMG/M
3300005549\|Ga0070704_101149135	Not Available	707	Open in IMG/M
3300005614\|Ga0068856_100578301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1144	Open in IMG/M
3300005615\|Ga0070702_100068104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2094	Open in IMG/M
3300005719\|Ga0068861_101623416	Not Available	637	Open in IMG/M
3300006028\|Ga0070717_10017883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 150FB	5527	Open in IMG/M
3300006173\|Ga0070716_101315373	Not Available	585	Open in IMG/M
3300006791\|Ga0066653_10477980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	632	Open in IMG/M
3300006806\|Ga0079220_11882763	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300006871\|Ga0075434_102581515	Not Available	509	Open in IMG/M
3300006904\|Ga0075424_100939176	Not Available	922	Open in IMG/M
3300007076\|Ga0075435_101781035	Not Available	540	Open in IMG/M
3300009093\|Ga0105240_11422967	Not Available	728	Open in IMG/M
3300009093\|Ga0105240_12761113	Not Available	505	Open in IMG/M
3300009148\|Ga0105243_11612796	Not Available	676	Open in IMG/M
3300009176\|Ga0105242_10295737	Not Available	1476	Open in IMG/M
3300009551\|Ga0105238_10044137	All Organisms → cellular organisms → Bacteria	4509	Open in IMG/M
3300009551\|Ga0105238_10183718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2068	Open in IMG/M
3300009551\|Ga0105238_11357307	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300009698\|Ga0116216_10027097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3578	Open in IMG/M
3300009700\|Ga0116217_10373953	Not Available	907	Open in IMG/M
3300009700\|Ga0116217_10936796	Not Available	531	Open in IMG/M
3300009824\|Ga0116219_10176227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1230	Open in IMG/M
3300010339\|Ga0074046_10022586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4384	Open in IMG/M
3300010379\|Ga0136449_100092259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6287	Open in IMG/M
3300010379\|Ga0136449_100112118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	5529	Open in IMG/M
3300010379\|Ga0136449_100377146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	2532	Open in IMG/M
3300010401\|Ga0134121_10245462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	1565	Open in IMG/M
3300011107\|Ga0151490_1115379	Not Available	554	Open in IMG/M
3300011270\|Ga0137391_10269402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1473	Open in IMG/M
3300012198\|Ga0137364_11166990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	578	Open in IMG/M
3300012207\|Ga0137381_11340323	Not Available	608	Open in IMG/M
3300012209\|Ga0137379_11288245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	637	Open in IMG/M
3300012350\|Ga0137372_10358348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1115	Open in IMG/M
3300012357\|Ga0137384_10293783	Not Available	1352	Open in IMG/M
3300012357\|Ga0137384_10705494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300012360\|Ga0137375_10743056	Not Available	796	Open in IMG/M
3300012492\|Ga0157335_1042677	Not Available	517	Open in IMG/M
3300012915\|Ga0157302_10566593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	503	Open in IMG/M
3300012925\|Ga0137419_10945136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	712	Open in IMG/M
3300012925\|Ga0137419_11143127	Not Available	650	Open in IMG/M
3300012925\|Ga0137419_11924790	Not Available	508	Open in IMG/M
3300012955\|Ga0164298_10461219	Not Available	839	Open in IMG/M
3300012961\|Ga0164302_10859315	Not Available	692	Open in IMG/M
3300013296\|Ga0157374_11465588	Not Available	706	Open in IMG/M
3300013297\|Ga0157378_10811363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300013306\|Ga0163162_11314877	Not Available	821	Open in IMG/M
3300013307\|Ga0157372_10059316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 150FB	4279	Open in IMG/M
3300014487\|Ga0182000_10645907	Not Available	516	Open in IMG/M
3300014968\|Ga0157379_10099498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2610	Open in IMG/M
3300017654\|Ga0134069_1167930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	739	Open in IMG/M
3300018032\|Ga0187788_10328728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	626	Open in IMG/M
3300018482\|Ga0066669_11493408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	614	Open in IMG/M
3300019885\|Ga0193747_1057002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300020004\|Ga0193755_1201849	Not Available	567	Open in IMG/M
3300021178\|Ga0210408_10549653	Not Available	916	Open in IMG/M
3300021178\|Ga0210408_10996251	Not Available	648	Open in IMG/M
3300021178\|Ga0210408_11450204	Not Available	515	Open in IMG/M
3300021180\|Ga0210396_11754363	Not Available	503	Open in IMG/M
3300021403\|Ga0210397_10295674	Not Available	1188	Open in IMG/M
3300021478\|Ga0210402_10551937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300025898\|Ga0207692_10506329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	767	Open in IMG/M
3300025899\|Ga0207642_10805310	Not Available	598	Open in IMG/M
3300025901\|Ga0207688_10064412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2069	Open in IMG/M
3300025901\|Ga0207688_10183848	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300025911\|Ga0207654_10257998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1171	Open in IMG/M
3300025924\|Ga0207694_10489679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300025928\|Ga0207700_10351758	Not Available	1283	Open in IMG/M
3300025928\|Ga0207700_10697322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	906	Open in IMG/M
3300025928\|Ga0207700_12024909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes palleronii	503	Open in IMG/M
3300025929\|Ga0207664_10191211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes deccanensis	1762	Open in IMG/M
3300025929\|Ga0207664_10585409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300025929\|Ga0207664_10973696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. H61	760	Open in IMG/M
3300025931\|Ga0207644_10780810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300025931\|Ga0207644_10812360	Not Available	782	Open in IMG/M
3300025931\|Ga0207644_11011357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	698	Open in IMG/M
3300025932\|Ga0207690_10898439	Not Available	735	Open in IMG/M
3300025945\|Ga0207679_10567054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1020	Open in IMG/M
3300025960\|Ga0207651_11895266	Not Available	536	Open in IMG/M
3300025961\|Ga0207712_10669205	Not Available	904	Open in IMG/M
3300026035\|Ga0207703_10051440	All Organisms → cellular organisms → Bacteria	3338	Open in IMG/M
3300026075\|Ga0207708_10958044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus elymi	742	Open in IMG/M
3300026121\|Ga0207683_11784445	Not Available	564	Open in IMG/M
3300026329\|Ga0209375_1240988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	616	Open in IMG/M
3300026490\|Ga0257153_1087345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300026555\|Ga0179593_1317354	All Organisms → cellular organisms → Bacteria	4989	Open in IMG/M
3300027625\|Ga0208044_1124630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	732	Open in IMG/M
3300027662\|Ga0208565_1016561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces lushanensis	2754	Open in IMG/M
3300027889\|Ga0209380_10679436	Not Available	592	Open in IMG/M
3300028710\|Ga0307322_10089199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300028793\|Ga0307299_10348423	Not Available	555	Open in IMG/M
3300028828\|Ga0307312_10321350	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1010	Open in IMG/M
3300028872\|Ga0307314_10258942	Not Available	542	Open in IMG/M
3300030494\|Ga0310037_10015339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3704	Open in IMG/M
3300031474\|Ga0170818_107793542	Not Available	744	Open in IMG/M
3300031747\|Ga0318502_10384937	Not Available	833	Open in IMG/M
3300031748\|Ga0318492_10275383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300031751\|Ga0318494_10779660	Not Available	560	Open in IMG/M
3300031890\|Ga0306925_10589577	Not Available	1175	Open in IMG/M
3300032044\|Ga0318558_10232056	Not Available	905	Open in IMG/M
3300032075\|Ga0310890_10915198	Not Available	701	Open in IMG/M
3300032089\|Ga0318525_10513795	Not Available	613	Open in IMG/M
3300032160\|Ga0311301_11802744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	728	Open in IMG/M
3300032160\|Ga0311301_11810063	Not Available	726	Open in IMG/M
3300032174\|Ga0307470_10215114	Not Available	1241	Open in IMG/M
3300032174\|Ga0307470_11036408	Not Available	655	Open in IMG/M
3300032180\|Ga0307471_102584176	Not Available	643	Open in IMG/M
3300032205\|Ga0307472_101164122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	734	Open in IMG/M
3300032261\|Ga0306920_103859769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	547	Open in IMG/M
3300032770\|Ga0335085_10911144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	957	Open in IMG/M
3300032770\|Ga0335085_10944910	Not Available	936	Open in IMG/M
3300032770\|Ga0335085_12494190	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.19%
Host-Associated	Host-Associated	25.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.77%
Plants	Host-Associated → Plants	25.81%
Aquatic	Environmental → Aquatic	2.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.26%
Freshwater	Environmental → Aquatic → Freshwater	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.81%
Loam	Environmental → Terrestrial → Soil → Loam	16.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.23%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_101333642	3300003368	Bog Forest Soil	MQRLIAADLLPERAGQPVKAWVHMSLADLLLLDGSSALLQEWTDGLRAQWAAHRAGASVGGSDGGAWLDGDAAAAMACDAAMAPFVTGE
JGI26340J50214_101574261	3300003368	Bog Forest Soil	VAQITMHFPSRRMRRLVASGLLPERAGQPAKVWAHISLADLLMLDGSYALQQEWTAGVRAQWAARRAAASVGGSDGAAWLEGDAARAFACDASVTPVVLGE
JGI26340J50214_101825831	3300003368	Bog Forest Soil	MRRLVASGLLPERAGQPAKVWAHISLADLLMLDGSYALQQEWTAGVRAQWAARRAAASVGGSDGAAWLEGDAARAFACDASVTPVVLGE
Ga0070680_1009313012	3300005336	Corn Rhizosphere	MTDIMMHFTSQRMRRLVAARLLPERAGQPVKVWAHISLADLLRLDGSSALQEQWTEHVRARWAARRAAASETGASGGAWLDGDAAE
Ga0070682_1003682363	3300005337	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQMEWTERVRARWAARRAHAAETGASDGAWLD
Ga0070709_114880981	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFPNWRMCRLAAVGMLPERAGQPVKAWAHISLADLLRLDGDSALQEQWTERVRARWAARRAHASETGASDGAWLDGD
Ga0070709_117603322	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTQNHSDRMRRLAAAGLLLERAGQPVKAWAHISLADLLLLDGDSALQQERTGRVRARWAARRAHAAEAGASDGAWLDG
Ga0070714_1001738271	3300005435	Agricultural Soil	MRRLTASGLLPERAGQPVKAWVHITLADLLRMDGDSALQEQWTERVRARWAARRAHAAETGASDGAWLDGDAAAAIACDA
Ga0070713_1002197051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGMLPERAGQPVKTWVHITLADLLRLQGSSALQEQWTEQVRARWAARRAHAAETGANDGAW
Ga0070711_1003692553	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGASDGAWLD
Ga0070711_1020660222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFPNWRMCRLAAVGMLPERAGQPVKAWAHISLADLLRLDGDSALQEQWTERVRARWAARRAHAAETGASDGAWLD
Ga0070704_1011491351	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWVHITLADLLRMDGDSALQEQWTEQVRARWAARRAHAAETGASDG
Ga0068856_1005783013	3300005614	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAA
Ga0070702_1000681041	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANDGAW
Ga0068861_1016234161	3300005719	Switchgrass Rhizosphere	MRRLTAANLVPERAGQPVKAWVHITLADLLLLDADSALQEQWTARVRARWAARRAQASETGANDGAWLD
Ga0070717_100178831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPVKAWAHISLADLLLDGDSALQQEWTERVRARWAARRAHAAETGASDGAWLDGDA
Ga0070716_1013153731	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPVKTWVHISLADLLLLDGDSALQEQWTERVRARWAARRAHASETGANDGAWLDGDAAAAIACDA
Ga0066653_104779802	3300006791	Soil	MRRLLAAGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTAQVRAAWAAHRARASETGASDGAWLDG
Ga0079220_118827632	3300006806	Agricultural Soil	VTNITMQNPNYRMRRLTASGLLPERAGQPVKAWVHITLADLLLLDGDSALQEQWTERVRARWAARRAAASETGASDGAWLDGDAAAAI
Ga0075434_1025815152	3300006871	Populus Rhizosphere	MQVTMHFPNWRMRRLAAAGLLPERAGQPVKAWAHISLADLLLLVADSALQDEWTGRVRARWAARRAHAAETGAADGAWLDGDAAAAI
Ga0075424_1009391762	3300006904	Populus Rhizosphere	MRRLAASGLLPERAGQPVKAWAHISLGDLILLDADSALQDQWTAQLRERRAVRRAAASEAGASDGVWLDGDAAEAIACDA
Ga0075435_1017810351	3300007076	Populus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLD
Ga0105240_114229671	3300009093	Corn Rhizosphere	MRRLAAAGLLPERARQPVKAWAHISLADLLLLDGDSALQAEWTERVRARWGARRAHAAETGASDGAWLDGDAAEAV
Ga0105240_127611131	3300009093	Corn Rhizosphere	MSRLVAADLLPERAGQPVKVWAHICLADLLRLDGSSALQEQWTAQVRARWAARRAAASETGASDGAWLDGDAAE
Ga0105243_116127961	3300009148	Miscanthus Rhizosphere	MRRLIAAGLLPERAGQPVKAWVHISLADLMLLDADSALQDQWITHVRERWAARRALASETGSEGGAWLAGDAAAAIAC
Ga0105242_102957371	3300009176	Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQQEWTERVRARWAARRAHAAEAGASDGPWLDG
Ga0105238_100441371	3300009551	Corn Rhizosphere	MRRLIAAGLLPERAGQPVKAWVHISLADLMLLDADSALQDQWITHVRERWAARRAFASETGSEGGAWL
Ga0105238_101837184	3300009551	Corn Rhizosphere	MRRLTAAGLLPERAGQPVKAWAHISLADLLLDGDSALQQEWTERVRARWAARRAHAAETGASDGAWLDGDAAAAI
Ga0105238_113573073	3300009551	Corn Rhizosphere	VTEITMHFPSHRMRRLTAAGLLPERAGQPVKALVHISLGDLTHLNGSACLTDQWIDGVRAKWAARRAAASETGSDGGAWLDGKA
Ga0116216_100270974	3300009698	Peatlands Soil	MQNPSQRMKRLLAAGLLPERAGQPVKAWVYISLADLMVLDGSSALLQEWTARVRARWAGHRAAAWAGGGDGGA*
Ga0116217_103739531	3300009700	Peatlands Soil	MMQKHSRRIRRLVAAGLLPERAGQPVKVVAHISLADLMVLEGSSALLEEWTSRVRAQWAGHRAAASAGGSDGGAWLDSDAAQAVACDAA
Ga0116217_109367962	3300009700	Peatlands Soil	VIKITMHFLSRRMQRLVTAGLLPDRAGQPAKVWAHVSLADLMMLDGSSALLEQWTARVRAQWAAHRAGASLGGSDGAAWLDGDAARAA
Ga0116219_101762272	3300009824	Peatlands Soil	MMQKRSRRMRRLVAAGLLPERAGQPVKAWVHISLADLMVLDGSSALLEEWTARVRAQWAGHRAAASAGGGDGGAWLDGDAATAMACD
Ga0074046_100225866	3300010339	Bog Forest Soil	LGNDVTQITMHFLSYRMRCLVAGGLLPERAGQPVKVVAHISLADLMVLDGSSALMEEWTARVRAQWAGHRAAASVSGSDGGAWLDG
Ga0134128_122532021	3300010373	Terrestrial Soil	MTDITMHFTSQRMRRLVAARLLPERAGQPVKVWAHISLADLLRLDGSSALQEECTAQVRARWAVHRATASETGASDG
Ga0136449_1000922597	3300010379	Peatlands Soil	VRRLVAADLLPERAGQPAKVWAHISLADLMMLDGSSALQEEWTARVRAQWAGHRAQASAGGSDGGAWLDGDAA
Ga0136449_1001121181	3300010379	Peatlands Soil	MQNHSGRMRRLVAAGLLPERAGQPVKVWAHIHLADLMTLEGSSALLEEWTAQVRSQWAAASEGGGDGGAWLDGDAAAA
Ga0136449_1003771463	3300010379	Peatlands Soil	MHFHKQRMQRLITAGLLPERAGQPVKVWAHISLADLMVLDGSSALQEEWTARVRAQWAAHRAEASAGGGDGG
Ga0134121_102454621	3300010401	Terrestrial Soil	MRRLTAAGLLPERAGQPVKAWAHISLADLLLLDGGSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDA
Ga0151490_11153791	3300011107	Soil	MRRLAASDLLPERAGQPVRAWVHVSLADLMMLDGSSALMKEWTEQVRAQWAARRAEASEGGSDGGAWLDGNAAAAVT
Ga0137391_102694021	3300011270	Vadose Zone Soil	MTQKHSGRMRRLVAADLLPERAGQPVKAWVHISLADLLILDGSSALLEEWTTRVRAQWAAHRAGASAGGSDGGAWLDGDAA
Ga0137364_111669901	3300012198	Vadose Zone Soil	MTQNHSDRMRRLTASGLLPERAGQPVKTWVHVSLADLLLLDGSSALQEEWTERVRARWAARRAQASETGDVDVDALEDLVRL
Ga0137381_113403231	3300012207	Vadose Zone Soil	MRRLTAANLLPERAGQPVKAWVHITLADLLRLQGSSALQEQWTERVRVRWAARRAQASETGASDGAWLDGD
Ga0137379_112882451	3300012209	Vadose Zone Soil	MTQNHSDRMRRLMAAGLLPERAGQPVKAWVHISLADLLLLDAGSALQDQWTAQVRERWAAHRAKASETGASDGAWLDGDAAEAIACDAAMAPVVT
Ga0137372_103583481	3300012350	Vadose Zone Soil	MTQNHSDRMRRLMAAGLLPERAGQPVKAWVHISLADLLLLDAGSALQDQWTAQVRERWAAHRAKASETGASDGAWLDGDAAEAIACDAAMAPV
Ga0137384_102937831	3300012357	Vadose Zone Soil	MRRLMAAGLLPERAGQPVKAWVHISLADLLLLDAGSALQDQWTAQVRARWAAHRAKASETGASDGAWLDGD
Ga0137384_107054943	3300012357	Vadose Zone Soil	MRRLMAAGLLPDRAGHPVKAWAHIFLADLLLLDGDSALQEQWTERVRARWAARRAHAAETGASDGAWLDGDAAAAIACDA
Ga0137375_107430561	3300012360	Vadose Zone Soil	MRRLVAANLLPERAGQPVKVWAHISLADLLQLDGSSALQEEWTAQIRAQWAAHRAAAAENGALGYAVSRTRL
Ga0157335_10426771	3300012492	Arabidopsis Rhizosphere	MRRLLAAGLLPERAGQPVKAWVHISLADLMLLDADSALQEQWTAYVREQWAARRAFASETGSEGG
Ga0157302_105665931	3300012915	Soil	MTQNHSDRMRRLTAANLLPERAGQPVKVWAHVSLADLLRLDGDSALQEQWTAQVRARWAAHRAIASETGASDGVWLDG
Ga0137419_109451361	3300012925	Vadose Zone Soil	MTQKHSGRMRRLVAAGLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQIRERRAARRAFASETGSDGGAWLDGDAAEGIACDAAMAL
Ga0137419_111431271	3300012925	Vadose Zone Soil	VPERAGQPVKAWVHITLADLLRLQGSSALQEEWTEQVRARWAARRAAASETGANDGAWLDGDAAQAIACDAAM
Ga0137419_119247901	3300012925	Vadose Zone Soil	MRRLVASDLLPERAGQPVRAWVHISLADLLLLDGDSALQEQWTAQVRERWAACRAFASETGSDGGAWLD
Ga0164298_104612191	3300012955	Soil	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDGDSALQAEWTERVRARWAARHAHAAEAGASDGAWLDGD
Ga0164302_108593151	3300012961	Soil	MRRLVASDLLPERAGQPVKAWGHITLADLLLLDGDSALQEQWTARVRARWAARRAQASETGANDG
Ga0157374_114655881	3300013296	Miscanthus Rhizosphere	MRRLAASGLLPERAGQPVKAWAHISLADLLLLDADSTLQDEWTAQVREQWAARRAAASEAGASDGVWLDGDAAEAIACDAVIA
Ga0157378_108113631	3300013297	Miscanthus Rhizosphere	MRRLTVAGLLPERAGQPVKAWAHISLADLLLLDSDSALQQEWTEQVRARWAARRAAASDTGASDGAWLDGDAASAVACDA
Ga0163162_113148772	3300013306	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPVKTWVHITLADLLRMEGSSALQEEWTEQVRARWAARRAAASETGASDGAWLDGDAAEAIACDPAMAPVVTGDID
Ga0157372_100593161	3300013307	Corn Rhizosphere	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDGGSALQQEWTERVRARWAARRAHAAETGASDGAWLDGDAAAAL
Ga0182000_106459071	3300014487	Soil	MRRLMAAGLLPGRAGNPVRAWAHISLADLLLLDGDTRLLEEWTVQVREQWAARRVAAAETGADDGAWLD
Ga0157379_100994984	3300014968	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPVKAWAHISLADLLLDGDSALQQEWTERVRARWAARRAHAAQTGANDGAWLDGNAAAAVACDAA
Ga0134069_11679302	3300017654	Grasslands Soil	MRRLLAAGLLPERAGQPVKAWVHISLADLLLLDADSALQEQWTEQVRARWAARRAAASETGANDGAWLDGDAAQAITCDAAMAPIVTGD
Ga0187788_103287281	3300018032	Tropical Peatland	MTQKHSRRMRRLAASDLLPERAGQPVRAWVHVSLADLMRLEGSSALLDQWAARVRAQWAARRAGAAAGAGDGGAW
Ga0066669_114934081	3300018482	Grasslands Soil	MTQKHSERMRRLTASGMLPERAGQPVKAWAHISLADLLLLDADSALQDQWTEQVRARWAARRAHASEAGASDGAW
Ga0193747_10570021	3300019885	Soil	MAAGLLPERAGQPVRAWAHISLADLILLDADSALQQEWTGRVRARWAARRAHASEAGASDGAWLDGDAAAAIAC
Ga0193755_12018492	3300020004	Soil	LLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQIRERWAACRAFASEAGSEGGAWLDGDAAEGI
Ga0210408_105496531	3300021178	Soil	MRRLVASDLLPERAGQPVKAWVHLSLADLLLLDGDSALQEQWTAQVRERWAARRAFAAETGSEGGAWLDGDAAGAI
Ga0210408_109962512	3300021178	Soil	MRRLTAAGLLPERAGQPVKAWAHISLADLLLLDGDSALQEQWTERVRARWADRRAAASETGASDGAWLDGDAAQAVACDAAMAPIVTGDGNVDA
Ga0210408_114502041	3300021178	Soil	MRRLVAAKLLPERAGQPVKAWVHIALADLLLLDADSALQEEWTAQMRERWAARRAAASETGASLHSHGPPARAG
Ga0210396_117543631	3300021180	Soil	VRRLTAAGLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQVRERWAAHRAAASEGGRDAGAWLDGDAAEAIACD
Ga0210397_102956742	3300021403	Soil	MQRLVTAGLLPERAGQPVKAWAHISLADLMALDGSSALLQEWTAGLRARWAGHRAEASAGGSDGGAWLDGDAAEAIACDAAMTPIVTGDVNP
Ga0210402_105519371	3300021478	Soil	MRRLVAADLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAHVRERWAARRAFASETGSEGGAWLDGDAA
Ga0207692_105063292	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAASGLLPERAGQPVKAWTHISLGDLILLDADSALQDQWTAQVRERWAARRAAASEAGASDGAWL
Ga0207642_108053102	3300025899	Miscanthus Rhizosphere	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTAQVRERWAARRAFASETASEGGAWLDGDA
Ga0207688_100644121	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDGGSALQDQWTERVRARWAARRAHAAEAGASDGAWLD
Ga0207688_101838481	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWVHITLADLLRMDGDSALQEQWTERVRARWAARRAHAAETGASD
Ga0207654_102579981	3300025911	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAV
Ga0207694_104896791	3300025924	Corn Rhizosphere	MHFTSQRMRRLTAAGLLPERAGQPVKAWAHISLADLLLDGDSALQQEWTERVRARWAARRAHAAETGASDGAWLDGDAAAAI
Ga0207700_103517581	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLIAAGLLPERAGAAVNVLAHMSLADLMLMEGSSALLEEWTSGLRARWAGHRAAAEEAGGHQGLWLDGDAAQALACDASVTPVVVGDV
Ga0207700_106973222	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFPNWRMCRLAAVGMLPERAGQPVKAWAHISLADLLRLDGDSALQEQWTERVRARWAARRAHASEAGASDGAWLDGDAAAAVAC
Ga0207700_120249092	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAASGLLPERAGQPVKAWTHISLGDLILLDADSALQDQWTAQVRERWAARRAAASEAGASDGAWLDGDAAE
Ga0207664_101912111	3300025929	Agricultural Soil	MRRLTASGLLPERAGQPVKAWVHITLADLLRMDGDSALQEQWTERVRARWAARRAHAAETGASDGAWLDGDAA
Ga0207664_105854091	3300025929	Agricultural Soil	MRRLAAAGLLPERAGQPVKAWAHISLGDLILLDADSALQDQWTTQLRERWAARRAAASEAGASDGAW
Ga0207664_109736962	3300025929	Agricultural Soil	MRRLVAARLLPERAGQPVKVWAHISLADLMLLDGDSALQRQWTAQVRARWAARRAAASGTGSDGGVWLDGDAAEGIACDAA
Ga0207644_107808101	3300025931	Switchgrass Rhizosphere	MRRLLASGLLPERAGQPVKALVHMSLADLMLLDGSSALMDEWAAHVRAQWAAARAAASESGSDGGAWLDGETA
Ga0207644_108123601	3300025931	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVT
Ga0207644_110113572	3300025931	Switchgrass Rhizosphere	MQVTMHFPNWRMCRLAAVGMLPERAGQPVKAWAHISLADLLRLDGDSALQEQWTERVRARWAARRAHASETGASDGAWL
Ga0207690_108984391	3300025932	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPV
Ga0207679_105670541	3300025945	Corn Rhizosphere	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDGDSALQAEWTERVRARWAARHAHAAEAGASDG
Ga0207651_118952662	3300025960	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRAHAAEAGASDGAWLDGDAAAAVVCDAA
Ga0207712_106692051	3300025961	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAYISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGANDGAWLDGDAAKAIACDAAMAPV
Ga0207703_100514404	3300026035	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGALLDGDAAAAIVCDA
Ga0207708_109580442	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPVKAWAHISLADLLLLDADSALQEQWTARVRARWAARRAEASETGANDGAWLDGDAAAAVACDAA
Ga0207683_117844451	3300026121	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDA
Ga0209375_12409881	3300026329	Soil	MTQKHSGRMRRLTAANLVPERAGQPVKAWVHITLADLLLLDADSALQEQWTEQVRARWAARRAQASETGASDG
Ga0257153_10873452	3300026490	Soil	MRRLTAAGLLPERAGQPVKAWVHISLADLLLLDGDSALQEEWTARVRARWAGRRAAASETGASDGAWLDGDAAEAIAC
Ga0179593_13173544	3300026555	Vadose Zone Soil	MRRLIAADLLPERAGQPVKAWVHVSLADLLMMEGSSALLDEWTAEVPRPVGGAPAAASAGGSDGGAWLDGTPPPRWRAMPQWLP
Ga0208044_11246301	3300027625	Peatlands Soil	MMQKHSGRMRRLVAAGLLPERAGQPVKVVAHISLADLMVLEGSSALLEEWTSRVRAQWAGHRAAASAGGSDGGAWLDSDAAQAVACDAALDDLVRL
Ga0208565_10165614	3300027662	Peatlands Soil	MRRLVAAGLLPERAGQPVKAWVHISLADLMVLDGSSALLEEWTSQVRAQWAGHRARASAGGGDGGAWLDGDAA
Ga0209380_106794361	3300027889	Soil	MQRLVTAGLLPDRAGQPVKAWIHISLADLLRLDGSSALLQEWTSRVRAQWAGHRAQASAGGGDGGAWLDGDAA
Ga0307322_100891991	3300028710	Soil	LLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQIRERWTACRAFASETGSEGGAWLDGDAAGAIA
Ga0307299_103484232	3300028793	Soil	LVAAGLLPERAGQPVKAWVHISLADLLLLLDGDSALQEQWTAQIRERWTACRAFASETGSEGGAWLDGDAAGAIA
Ga0307312_103213501	3300028828	Soil	LMQVTMHFPNWRMRRLIAAGLLPERAGQPVKAWVHISLADLMLLAGDSALQDQWTAHVRRQWAAQRAFASETGSEGGAWLDGDAAE
Ga0307314_102589422	3300028872	Soil	LPERAGQPVKAWVHISLADLLLLLDGDSALQEQWTAQIRERWTACRAFASETGSEGGAWLDGDAAGAIA
Ga0310037_100153394	3300030494	Peatlands Soil	MQNPSQRMKRLLAAGLLPERAGQPVKAWVYISLADLMVLDGSSALLQEWTARVRARWAGHRAAAWAGGGDGGA
Ga0170818_1077935421	3300031474	Forest Soil	MRRLAASDLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQVRARWAARRAFASETDSDGGAWLDGQDAGAIACDAAMAPL
Ga0318572_109558251	3300031681	Soil	VTDLTTQISIERMRRLVAADLLPERAGQPVKIWAHMSLADLLRFDGSSALQEEWTAQVRAQWAAHRAAASEGGSDGGGVAGWRRRR
Ga0318502_103849373	3300031747	Soil	MCRLTAAGLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQIRARWAGHRAAASEGGGDSGVWLEGDA
Ga0318492_102753833	3300031748	Soil	VTEITMQNHSRRMRRLVAADLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQVRAAWAGHRAAASETGGGGAWM
Ga0318494_107796601	3300031751	Soil	VTEITMQNHSRRMRRLVAADLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQVRAARAGHRAAASESGSGGGAWLDGDAAGAIGCD
Ga0306925_105895771	3300031890	Soil	MCRLTAAGLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQIRARWAGHRAAASEGGGDSGVWLEGDAAEAIACD
Ga0318558_102320563	3300032044	Soil	MCRLTAAGLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQIRARWAGHRAAASEGGGDSGVWLEGDAAEAIACDA
Ga0310890_109151982	3300032075	Soil	MRRLAAAGLLPERAGQPVKAWAHISLADLLLLDGDSALQAEWTERVRARWAARHAHAAEAGASDGA
Ga0318525_105137951	3300032089	Soil	MCRLTAAGLLPERAGQPVKVWAHISLADLLRLEGSSALQEEWTAQIRARWAGHRAAASEGGGDSGVWLEGDAAE
Ga0311301_118027441	3300032160	Peatlands Soil	MQNHSGRMRRLVAAGLLPERAGQPVKVWAHIHLADLMTLEGSSALLEEWTAQVRSQWAAASEGGGDGGAWLDGDAAAAVA
Ga0311301_118100633	3300032160	Peatlands Soil	MNPNMMQNHSGRMQRLLAAGLLPGRAGQPVRAWAHMSLAELLALDGDGALLGQWTAAVRARWAGHRAAASMAGGDGAAWLDGA
Ga0307470_102151141	3300032174	Hardwood Forest Soil	MRRLVAANLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTEQIRERWAACRAFASEAGSEGGAWLDGDAAEGI
Ga0307470_110364081	3300032174	Hardwood Forest Soil	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAM
Ga0307471_1025841762	3300032180	Hardwood Forest Soil	MQRLVAAGLLPERAGQPVKAWVHISLADLLLLDGDSALQEQWTAQVRQRWAARRAFAAETGSEGGAWLDGDAAEGVACDAAMAPLSPGTSTSARWR
Ga0307472_1011641222	3300032205	Hardwood Forest Soil	MTQNHSDRMRRLAASDLLPERAGHPARAWVHMSLADLLRLEGSSALLEQWTAQVRAQWAARRAGAAAGDGTAGAWLDGDAAAAIT
Ga0306920_1038597691	3300032261	Soil	VPRLDRPPAASLAMRRLAASDLLPARAGQPVKAWAHMSLAELLAMDGSSALQEEWTGRVRAQWAAHRAGASAHGGESGAW
Ga0335085_109111442	3300032770	Soil	MRRLAASGLLPERAGQPVKAWAHISLGDLILLDADSALQAEWTARVRERWAARRAAASEAGASDGAWLDGVAAEAIA
Ga0335085_109449101	3300032770	Soil	MRRLLAAGLLPERTGQPVRALVHMSLADLMRLDGSSALQEEWSARVRARWAAHRAAASESGSDGGAWLDGEAAAAFTCDASAIPVVTGDVNLDSPH
Ga0335085_124941901	3300032770	Soil	MRRLVAADLLPERAGQPVKVWAHMSLADLLRLDGSSALQEEWTAQVRAAWAAHRAAASETGGDGGAWLDGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences