NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069239

Metagenome Family F069239

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069239
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 88 residues
Representative Sequence MRDRELRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRDGASDADARQRALDTLNAASFLELSKRPRARRGGGYVHD
Number of Associated Samples 109
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.45 %
% of genes near scaffold ends (potentially truncated) 97.58 %
% of genes from short scaffolds (< 2000 bps) 94.35 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(12.097 % of family members)
Environment Ontology (ENVO) Unclassified
(34.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.355 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF03551PadR 79.03
PF02687FtsX 7.26
PF12704MacB_PCD 4.03
PF00072Response_reg 0.81
PF01548DEDD_Tnp_IS110 0.81
PF07992Pyr_redox_2 0.81
PF03965Penicillinase_R 0.81
PF00196GerE 0.81
PF13360PQQ_2 0.81
PF003892-Hacid_dh 0.81
PF02274ADI 0.81
PF13840ACT_7 0.81
PF00278Orn_DAP_Arg_deC 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 79.84
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 79.03
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 79.03
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 0.81
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 0.81
COG1834N-Dimethylarginine dimethylaminohydrolaseAmino acid transport and metabolism [E] 0.81
COG2235Arginine deiminaseAmino acid transport and metabolism [E] 0.81
COG3547TransposaseMobilome: prophages, transposons [X] 0.81
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.81
COG4874Uncharacterized conserved proteinFunction unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0824834All Organisms → cellular organisms → Bacteria → Acidobacteria931Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105748589All Organisms → cellular organisms → Bacteria → Acidobacteria1020Open in IMG/M
3300000953|JGI11615J12901_12237120All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300004480|Ga0062592_100721508All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae870Open in IMG/M
3300004480|Ga0062592_101377751All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300004633|Ga0066395_10341962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium829Open in IMG/M
3300004643|Ga0062591_100323242All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300005169|Ga0066810_10075064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium707Open in IMG/M
3300005169|Ga0066810_10144552All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005186|Ga0066676_10866084All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis608Open in IMG/M
3300005186|Ga0066676_11148775All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005293|Ga0065715_10307513All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1027Open in IMG/M
3300005294|Ga0065705_10993680All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005332|Ga0066388_101084885All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300005340|Ga0070689_100053419All Organisms → cellular organisms → Bacteria3127Open in IMG/M
3300005354|Ga0070675_101706033All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005354|Ga0070675_101944593All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300005356|Ga0070674_100506646All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300005447|Ga0066689_10089590All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300005466|Ga0070685_10790827All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis698Open in IMG/M
3300005471|Ga0070698_100583992All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300005471|Ga0070698_100771132All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium905Open in IMG/M
3300005471|Ga0070698_101813754All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300005536|Ga0070697_100321366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1333Open in IMG/M
3300005543|Ga0070672_100359994All Organisms → cellular organisms → Bacteria → Acidobacteria1241Open in IMG/M
3300005544|Ga0070686_100035262All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3089Open in IMG/M
3300005544|Ga0070686_100138717All Organisms → cellular organisms → Bacteria1690Open in IMG/M
3300005555|Ga0066692_10251554All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300005557|Ga0066704_10439387All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300005558|Ga0066698_10919911All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis559Open in IMG/M
3300005559|Ga0066700_10705303All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300005568|Ga0066703_10891051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300005618|Ga0068864_101892871All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis602Open in IMG/M
3300005713|Ga0066905_100043486All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2685Open in IMG/M
3300005764|Ga0066903_104614361All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300005840|Ga0068870_11311519All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005841|Ga0068863_100812441All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300005842|Ga0068858_100494866All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1181Open in IMG/M
3300005842|Ga0068858_102524448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300005843|Ga0068860_101418035All Organisms → cellular organisms → Bacteria → Acidobacteria716Open in IMG/M
3300005844|Ga0068862_102088047All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300005844|Ga0068862_102342760All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005937|Ga0081455_10530665All Organisms → cellular organisms → Bacteria → Acidobacteria783Open in IMG/M
3300005985|Ga0081539_10328736All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300006173|Ga0070716_100891936All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300006173|Ga0070716_101844531All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300006844|Ga0075428_101211754All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300006854|Ga0075425_102152042All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300006969|Ga0075419_10439710All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300007076|Ga0075435_100629744All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300009012|Ga0066710_100324060All Organisms → cellular organisms → Bacteria2267Open in IMG/M
3300009012|Ga0066710_103095772All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300009137|Ga0066709_100627772Not Available1535Open in IMG/M
3300009147|Ga0114129_10262605All Organisms → cellular organisms → Bacteria2313Open in IMG/M
3300010036|Ga0126305_10428908All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300010044|Ga0126310_11832899All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300010047|Ga0126382_10900574All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300010047|Ga0126382_11322079All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300010304|Ga0134088_10392786All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300010323|Ga0134086_10086519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1096Open in IMG/M
3300010329|Ga0134111_10530765All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300010336|Ga0134071_10436326All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300010400|Ga0134122_11303162All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300010403|Ga0134123_10169784All Organisms → cellular organisms → Bacteria1826Open in IMG/M
3300011441|Ga0137452_1140550All Organisms → cellular organisms → Bacteria → Acidobacteria810Open in IMG/M
3300012096|Ga0137389_11402037All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300012199|Ga0137383_10798212All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300012358|Ga0137368_10644918All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300012532|Ga0137373_11219639All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012905|Ga0157296_10213054All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300012951|Ga0164300_10393692All Organisms → cellular organisms → Bacteria → Acidobacteria759Open in IMG/M
3300012958|Ga0164299_11689696All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300013308|Ga0157375_10414285All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300014150|Ga0134081_10010305All Organisms → cellular organisms → Bacteria2495Open in IMG/M
3300014267|Ga0075313_1209345All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300014969|Ga0157376_10890344All Organisms → cellular organisms → Bacteria → Acidobacteria908Open in IMG/M
3300015053|Ga0137405_1301745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1872Open in IMG/M
3300015372|Ga0132256_100569916All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300017656|Ga0134112_10281782All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300018422|Ga0190265_12917083All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300018476|Ga0190274_10792202All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1004Open in IMG/M
3300018482|Ga0066669_10777216All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300018482|Ga0066669_11678943All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300018482|Ga0066669_12307863All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300023071|Ga0247752_1066634All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300025924|Ga0207694_10727150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium838Open in IMG/M
3300025925|Ga0207650_11846945All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300025926|Ga0207659_11874310All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300025935|Ga0207709_11562402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300025936|Ga0207670_10780270All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300025936|Ga0207670_11842620All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300025938|Ga0207704_11335610All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300025940|Ga0207691_10697120All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300025942|Ga0207689_10573636All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300026035|Ga0207703_11350023All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300026075|Ga0207708_10679976All Organisms → cellular organisms → Bacteria → Acidobacteria878Open in IMG/M
3300026118|Ga0207675_102487747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300026295|Ga0209234_1298994All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300026310|Ga0209239_1333224All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300026324|Ga0209470_1297407All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300026536|Ga0209058_1277720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300026548|Ga0209161_10288886All Organisms → cellular organisms → Bacteria → Acidobacteria812Open in IMG/M
3300026550|Ga0209474_10524575All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300026557|Ga0179587_11124825All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300027821|Ga0209811_10045673All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300027909|Ga0209382_10436627All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300028768|Ga0307280_10400906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300028812|Ga0247825_10074910All Organisms → cellular organisms → Bacteria2269Open in IMG/M
3300031731|Ga0307405_10696451All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300031854|Ga0310904_10543178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300031901|Ga0307406_10771513All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300031911|Ga0307412_11985257All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300031943|Ga0310885_10339030All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300031995|Ga0307409_101014481All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300031996|Ga0308176_12528971All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300032000|Ga0310903_10588179All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300032002|Ga0307416_100724588All Organisms → cellular organisms → Bacteria → Acidobacteria1085Open in IMG/M
3300032005|Ga0307411_12292955All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300032012|Ga0310902_10993477All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300032013|Ga0310906_10283438All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300032075|Ga0310890_10127445All Organisms → cellular organisms → Bacteria → Acidobacteria1647Open in IMG/M
3300032076|Ga0306924_10784885All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300032174|Ga0307470_10395123All Organisms → cellular organisms → Bacteria → Acidobacteria976Open in IMG/M
3300034819|Ga0373958_0072066All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.10%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.26%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.61%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_082483413300000033SoilMRDRDLRQWKALVRQRADRERRELSVEVVDELACHLAEMQATAVRNGASDADGRRMALDTLNAASFLELSKRPRARSRGTIFMKSDLVYALRGLRK
INPhiseqgaiiFebDRAFT_10574858913300000364SoilMRDRELREWRAMVRERADAEWRALSSEVIDELACHLADQYAAARRGGATDAQARDIARQVLNAASFLELSKRPRA
JGI11615J12901_1223712023300000953SoilMRDRDLREWRTLIRERADREWRELSNDVVDELACHLADLHAAALSGGATDADARARALDALNHASFLEVSKRPRARNMPTGYGHDLRFAIRQL
Ga0062592_10072150833300004480SoilMRERELRHWKALVRQRAARERRELSMDVVDELACHLADLHAAAVRSGTSDADARRLALETLNAASFLE
Ga0062592_10137775123300004480SoilMRDRDLAPWKALVRERAQRESRELSRDVVAELACHLVELEEAAIHDGASAADARRQALDALNAASFLPLSKRPR
Ga0066395_1034196223300004633Tropical Forest SoilMRDRDLRHWRALVRDRAKAEWRELSLDVIDELACHLADLHAAALRDGATEEEAEHRALDALRSASFLELSKRPRARR
Ga0062591_10032324213300004643SoilMRDRDLRQWKALVRQRADRERRELSMDVVDELACHLADLHATAVRTGASDADARRMALETLNAASFLELSKRPRAR
Ga0066810_1007506423300005169SoilMRDRQVRQWRTLVRERANREWRELSLDVIDELACHLAELQASAIRRGASDSEAYQIALDALDSASFLELSKRPRARRGGGYVHDV
Ga0066810_1014455223300005169SoilMRDRDLRRWRSLVRARAAREWRELSTEVVDELACHLSDLHADALERGAAADEASRIALDTLNTASFLELSKRPRSRRGVG
Ga0066676_1086608413300005186SoilMRDRSLREWRALVRDRADREWRALSPDVVDELACHLADLHASALGNGASEEAARRDALDALNAASFLEVSKQPRARRFPGGHMHDIRLAF
Ga0066676_1114877523300005186SoilMRDRDLRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRAGASDGDARQKALDTLNAASFLELSKRPRARRGGGYV
Ga0065715_1030751333300005293Miscanthus RhizosphereMRDRDLRRWRSLVRARAEREWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLELSKRPRSRRGVGYGHDVRIALRQLTATP
Ga0065705_1099368023300005294Switchgrass RhizosphereMRDRDLRRWRSLVRARAEHEWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLELSKRPRARRGV
Ga0066388_10108488513300005332Tropical Forest SoilMRDPEMRRWRALVRDRADRDWRELSLDVVDELACHLADLYANAVRSGASESDAERIALDALNAASFLEISKRPRARRGVGYASDVRVALRQLAAAPVVTAVAVLSLALGI
Ga0070689_10005341933300005340Switchgrass RhizosphereMRDRDLRRWRSLVRARAEREWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFL
Ga0070675_10170603313300005354Miscanthus RhizosphereMPDRGLRQWTALVRQRAHRDGRELSVDVVDELACHLADLHATAVRNGASDADARRMALETLSAASFLELSKRPRA
Ga0070675_10194459313300005354Miscanthus RhizosphereMRDRELRQWKALVRERANREWRELSLEVVDELGCHLADLYTAAIRDGASDGAARQLAIDTLNAASFLELSKRPRARPGGGYVHDIRVALRQLAGT
Ga0070674_10050664613300005356Miscanthus RhizosphereMPDRELRSWKSLVRERADREWRELSLEVVDELACHLADLHAAALRGGSTEHQARQAALDALNAASFLDLSKRPRSRRGVGYGHDVRIALRQLTATPIVS
Ga0066689_1008959033300005447SoilMRDRDLRQWKALVREHANREWRELSLEVVDELACHLAELHAAAIRDGASEADARQMALDTLNAASFLELSKNARAPGAAADMCTTSESPCGS*
Ga0070685_1079082713300005466Switchgrass RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHKGASEADARRQALDALNAASFLPLSKRPRARLGGGYVHDVRVAVRRLTATPVVTIVAVMSLAFGI
Ga0070698_10058399223300005471Corn, Switchgrass And Miscanthus RhizosphereMRDRDLRRWRALVRERAKAEWRELSSEVVDELACHLADLHASALERGACEADADRIANDTLRSASFFELSKRPRARRSPVGYVHDIRIAFRQLVATPVVTVVAILSLALG
Ga0070698_10077113233300005471Corn, Switchgrass And Miscanthus RhizosphereMRDRGLREWRALVRARADREWRALSTDVVDELACYLADLEAAALADGASEADARGRALDALNAASFLEVSKRPRA
Ga0070698_10181375413300005471Corn, Switchgrass And Miscanthus RhizosphereMRDRELRHWKALVRERANREWRELSLEVVDELACHLADLHAAALRGGSSEQEAHQIAFDVLNAASFLELSKRPRARRGGG
Ga0070697_10032136613300005536Corn, Switchgrass And Miscanthus RhizosphereMRDRGLREWRALVRARADREWRALSTDVVDELACYLADLEAAALADGASEADARGRALDALNAASFLEVSKRPRARRSPIGVVHDLRIAARQLL
Ga0070672_10035999413300005543Miscanthus RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHKGASEADARRQALDALNAASFLPLSKRPRARLGGGYVH
Ga0070686_10003526263300005544Switchgrass RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSKRPRARLGGGYVHDVRVAVRRLTATPVVT
Ga0070686_10013871713300005544Switchgrass RhizosphereMRDRDLRRWRSLVRARAEREWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLELSKRPRSRRGVGYGHD
Ga0066692_1025155433300005555SoilMRDRDLRQWKALVRERANREWRELSLDVVDELASHLADLHAAAIRDGASDVDARQRALDTLDSLNGASFLELSK
Ga0066704_1043938733300005557SoilMRDRLMRQWRTLIRERANRQWRELSLDTVDELACHLSELQESSTRRGASDEEARQIALDALNAASFLELSNRPRARHGGYLHDL
Ga0066698_1091991123300005558SoilMRDRPLREWRALVRERADRDWRELSPDVVDELACHLADLHASASGNGASEEDARRLALDVLNSASFLELSKRPRARRFPGGHVHA
Ga0066700_1070530313300005559SoilMRDRDLRQWKALVREHANREWRELSLEVVDELACHLAELHAAAIRDGASEADARQMALDTLNAASFLELSKRPRSRRGGGYVHDIRVAMRQLIATPV
Ga0066703_1089105113300005568SoilMRDRDLRRWKTLVRERADQEWRTLSLEVIDELACHLADLHAAALDSGASDAEADRIAADALQSASFLELSKR
Ga0068864_10189287123300005618Switchgrass RhizosphereMRDRELREWRAMVRERADAEWRALSSDVIDELACHLADQYAAARRGGATDAEARDIARQVLNAASFLELSKRPRARIGGGYGHDLKVAVRQMLATPVVTIVAVLSLA
Ga0066905_10004348633300005713Tropical Forest SoilMPDRELRHWKSLVRERADREWRELSLEVVDELACHLADLYAAALRGGSTEPEARQAALDALNTASFLELSKRPRARRSPVGVVHDLRIAARQLLATPVVTAV
Ga0066903_10461436113300005764Tropical Forest SoilMRDRELRRWRSLVRARADREWRELSLDVVDELACHLVDLRASALRRGATEGEADEAALVALNAASFLELSR
Ga0068870_1131151913300005840Miscanthus RhizosphereMRDRDLAQWKVLVRERAERESRELACDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSKRPRARLGG
Ga0068863_10081244113300005841Switchgrass RhizosphereMRDRDLRRWRSLVRARAEREWRELSTEVVDELACHLSDLYADAIERGAADDQAYRIALETLNTASFLELSKRPRSRGGVG
Ga0068858_10049486633300005842Switchgrass RhizosphereMRDRQMRHWRTLVRERANREWRELSLDVVDELACHLAELQTSAISRGASDGEAQQIALDALNSASFLELSKRPRAR
Ga0068858_10252444813300005842Switchgrass RhizosphereMRDRGLRQWKDLVRERADREWRELSLDVVDELACHLADLHAAAIRDGASEADARQIALDTLNAASFLELSKRPRARRGGGYAHDL
Ga0068860_10141803523300005843Switchgrass RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSKRPRAR
Ga0068862_10208804713300005844Switchgrass RhizosphereMRDRDLRHWKALVRERANREWRELSREVVDELGCHLADLHAAAIRDGASDVDARRRALDTLNAASFLELSKRPRARHGGGYIHDVRVAMRQLV
Ga0068862_10234276013300005844Switchgrass RhizosphereMPDRGLRQWTALVRQRAHRDGRELSVDVVDELACHLADLHATAVRNGASDADARRLALETLNAASFLELSKRP
Ga0081455_1053066513300005937Tabebuia Heterophylla RhizosphereMRDREQRRWRAMVRQRANAEWRELSTDVVDELACHLADQYANAMARGESEEAATRLAVDMLNAASFLDLSKRPRARRFTGGHLHDLRVAVRQLRATPIVTA
Ga0081539_1032873623300005985Tabebuia Heterophylla RhizosphereMRDRELREWRLLVRQRADAEWRHLSLGVVDELACHLADLHASALRAGATNDEAHRVALDALQSASFLELSKRPRARHRPGGYMHDIRLAFRQLLATPVVTL
Ga0070716_10089193613300006173Corn, Switchgrass And Miscanthus RhizosphereMRDRELRRWKTLVRERAKAEWRELSSEVVDELACHLADLHAAALDRGATEAEADRVAADALHGASFLELSKRPRARRSPVGLVQDVRLAFRQ
Ga0070716_10184453113300006173Corn, Switchgrass And Miscanthus RhizosphereMRDPDLHRWRALVRARADREWRELSFDVVDELAGHLADLQAAAIRNGASEHEAERRALEALNAASFLELSKRPPARRGVGYAHDIRVAIRQL
Ga0075428_10121175413300006844Populus RhizosphereMRDRDLRRWRSLVRARAEHEWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLELSKRPRARRGVGYGHDVRIALRQMIATPIVSAVAVLSLA
Ga0075425_10215204223300006854Populus RhizosphereMRDRDLRRWRSLVRARAEREWRELSTEVVDELACHLADLHADALARGAADDEAHRIALDTLNTASFLELSKRPRSRRGVGYGHDIRIALRQLI
Ga0075419_1043971013300006969Populus RhizosphereMRDRDLRRWRSLVRARAEREWRELSVEVVDELACHLSDLHADAIAGGAADDEAQQIALDTLNAASFLELSKRPRARRGVGYGHDVRIALRQMIATPI
Ga0075435_10062974433300007076Populus RhizosphereMRDRDLREWRTLIHERADREWRELSPDVEHELACHLADLHAAALTRGASQADARRLALEALNAASFLEVSKRPRARHMPTGYVQDVRLAIRQLRASPLVSA
Ga0066710_10032406013300009012Grasslands SoilMRDRDLRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRAGASDGDARQKALDTLNAASFLELSKRPRARRGGGYVHDIRIAIRQLAGTPVVTIVAVLSLALGI
Ga0066710_10309577213300009012Grasslands SoilMRDRTLREWRAMVRERADRDWRELSPDVVDELACHLAELHASTLGNGVSEEEARRGARDALNAASFVEVSKRPRARRFPVGHMHDIR
Ga0066709_10062777213300009137Grasslands SoilMHDRNLRHWKALVRRRADEEWRQLSLEVIDELACHLADLHAAALRRGASEDEADRCALDALQAASFLELSKRPRARRVPVGYVHDVRLALRQPIATAV
Ga0114129_1026260533300009147Populus RhizosphereMPDRELRHWRSLVRERADREWRELSLEVVDELACHLADLYAAALRGGSTEPEARQAALDALSAASFLEV
Ga0126305_1042890813300010036Serpentine SoilMRDRDLRQWKALVRQRADREGRELSVDVVDELAGHLDDLHATAVRNGATDAGARRMALEALNAASFLELSKRPRARTRGAVFMTSDL
Ga0126310_1183289923300010044Serpentine SoilMRDRDLRQWKALVRQRADREWRELSLEVVDELACHLADLYAAAIRDGASAVDARQLALDTLNAASFLELSKRPRARRGGGYLH
Ga0126382_1090057413300010047Tropical Forest SoilMRDRDVREWRKLVRERADREWRELSLDVVDELASHLADVHAAALAAGARHGEARGRALEALNAASFLELSKRPRARQMP
Ga0126382_1132207923300010047Tropical Forest SoilMRDGDLRHWKALVRKRADEEWRRLSPEVVDELACHLAELHAAARGRGATPDEADRVTGEALRSASFLELSKRPRARRSPVGYVHDLRLAFRQLIATPVVSIVAVLSLAL
Ga0134088_1039278613300010304Grasslands SoilMRDRELRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRDGASDVDARQMALDTLNAASFLELSKRPRARLGGGYVHDIRLG
Ga0134086_1008651913300010323Grasslands SoilMRDRPLREWRALVRERADRDWRELSPDVVDELACHLADLHASASGNGASEEDARRLALDVLNSASFLELSKRPRARRFPGGHVHAMI
Ga0134111_1053076513300010329Grasslands SoilMRDRPLREWRALVRERADRDWRELSADVVDELACHLADLHASALGNGASEEEARRGALDALNAASFLDVSKRPRARRVPGGHMHDIRLAFRQLRATPIVTLVAVL
Ga0134071_1043632613300010336Grasslands SoilMRDPLMREWRTLVRERANREWRELSLDVVDELACHLAELQASSIRRGASNEEARQVALDALNGASFLELSKRPRARPGGYLHDFR
Ga0134122_1130316223300010400Terrestrial SoilMRDRDLRHWKALVRERANREWRELSRDVVDELACHLADLQAAAMHDGASEADARQMALDTLNAASFLELSKRPRARRGGGYVHDIRVATRQLIAT
Ga0134123_1016978413300010403Terrestrial SoilMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSK
Ga0137452_114055033300011441SoilMRDRDLRQWKALVRQRADRERRELSMDVVDELACHLADLHATAVRHGASDADARRMALETLNAASFLELSKRPRARARG
Ga0137389_1140203713300012096Vadose Zone SoilMRDRDLRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRDGASDVDARQMALDTLNQASFLELSKRPRARHGGGYGHDIRVAMRQLIATPVVTIVALLSLALGI
Ga0137383_1079821233300012199Vadose Zone SoilMRDRELRHWKSLVRERANREWRELSFEVVDELACHLAELHAAAIRRGVSDAEAHQIALDALNAASFLEISKR
Ga0137368_1064491823300012358Vadose Zone SoilMRDRELRQWKTLVRERADREWRELSLEVVDELACHLADLNAAAVRSGASEHEARAVALDALNAASFLELSKRPRARRGGGYAHDLRVAMRQLIGTPVVT
Ga0137373_1121963923300012532Vadose Zone SoilMRDRPLREWRALARERADRDWRELSPDVVDELACHLADLHASALGNGASEEEARRGALDALNAASFLEVSKRPRARRFPGGHMHDIRLAFRQLRATPIV
Ga0157296_1021305413300012905SoilMRDRELREWRAMVRERADAEWRALSSDVIDELACHLADQYAAARRGGATDEEARDIARQVLNAASFLELSKRPRARIGGGYGHD
Ga0164300_1039369213300012951SoilMRDRDLRRWRSLVRARAKHEWRELSLEVVDELAGHLADLHADAIARGAADEEAYRIALETLNTASFLELSKRPRARRGVGYGHDIRSALRQLVATPIVT
Ga0164299_1168969623300012958SoilMRDRDLRRWRSLVRARAKHEWRELSLEVVDELACHLADLHADAIARGAADEEAYRIALETLNTASFL
Ga0157375_1041428513300013308Miscanthus RhizosphereMRDRQMRHWRTLVRERANREWRELSLDVVDELACHLAELQASAIRRGASDAEARQIALDALNSASFLELSKRPRTRHGGGYVHDFRVAIRQLIATPVVTAIAALSLA
Ga0134081_1001030553300014150Grasslands SoilMRDRLMRQWRTLIRERANRQWRELSLDTVDELACHLSELQESSTRRGASDEEARQIALDALNAASFLELSKRPRARHG
Ga0075313_120934513300014267Natural And Restored WetlandsMRDRDLRHWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGTSDAGARRMALDTLNAASFLELSKRPRARSRGTVFTKSDLIYAVRGLRRKPLFTAA
Ga0157376_1089034433300014969Miscanthus RhizosphereMRDRQMRQWRTLVRERANREWRELSLDVQEELACHLVELEASAIRRGASGSEARRLALDALGSASFLELSKR
Ga0137405_130174533300015053Vadose Zone SoilMRDRQMRQWRTLVRERANREWRELSLDVLEELACHLAELQASAIRRGASDDEARQIALDALDSASFLELSKRPRARHGGGYLHDFRVAIRQLIATRS*
Ga0132256_10056991613300015372Arabidopsis RhizosphereMRDRDLRRWRSLVRARAKHEWRELSLEVVDELACHLADLHADAIDRGATDDEAYRIALETLNTASFLELSKRPRARRGVGFGHD
Ga0134112_1028178213300017656Grasslands SoilMRDRELRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRDGASDADARQRALDTLNAASFLELSKRPRARRGGGYVHD
Ga0190265_1291708323300018422SoilMRDRDLRQWKALVRQRADRERRELSMDVVDELACHLADLHATAVRNGASDADARRMALDTLNAASFLELSKRPRARSRTRPCRPRRHDSSAQ
Ga0190274_1079220213300018476SoilMRDRQMREWRTLVRERANREWRELSLDVVDELACHLADLQASAIRRGASDGEAHQIALDALNSASFLELSKRPRARRGGGYAHDFRV
Ga0066669_1077721613300018482Grasslands SoilMRDRELDEWRVLIRVRADREWRELSRDVLDELACHLADLHASAVARGAGADQARALALEALNAASFLELSKRPRARRVPGGHMQDIRVAWRQLRATPI
Ga0066669_1167894313300018482Grasslands SoilMRDRTLREWRALVRERADRDWRELSPDVVDELACHLADLHASANGNGASEEDARRLALDALNAASFLELSKRPRARRFPGGHMHDIRLAVRQPRATPIVTVVAVL
Ga0066669_1230786313300018482Grasslands SoilMRDRELRHWKSLVRERANREWRELSFEVVDELACHLADLHAAAIRRGVSDAEAHQIAVDALNAASFLEISKRPRARRGSGYGHDLRVATRQLLGTPVVTT
Ga0247752_106663413300023071SoilMRDRELREWRAMVRERADAEWRALSSDVIDELACHLADQYAAARRGGATDAEARDIARQVLNAASFLELSKRPRARIGGGYGHDLKVAVRQMLATPVVT
Ga0207694_1072715013300025924Corn RhizosphereMRDRHLRQWRTLVRERANREWRELSLDVVDELACHLAELEASAIRRGASDGEARQLALDALSSASFLELSKRPRARPGGGYVHDVRVAIRQLIATPVVTT
Ga0207650_1184694523300025925Switchgrass RhizosphereMPDRGLRQWTALVRQRAHRDGRELSVDVVDELACHLADLHATAVGNGASDADARRMALETLSAASF
Ga0207659_1187431023300025926Miscanthus RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSKRPRARLGGGYVHDVRVAVRRLTAT
Ga0207709_1156240223300025935Miscanthus RhizosphereMRDRQMRQWRTLVRERANREWRELSLDVQEELACHLVELEASAIRRGASGSEARRLALDALGSASFLELSKRPRARRGGGYAHDVRVAIRQLIATPVVTTVA
Ga0207670_1078027013300025936Switchgrass RhizosphereMRDRELREWRAMVRERADAEWRALSSDVIDELACHLADQYAAARRGGATDAEARDIARQVLNAASFLELSKRPRARIGGGYGHDLKVAVRQMLATPV
Ga0207670_1184262013300025936Switchgrass RhizosphereMRDRDLAQWKVLVRERAERESRELARDVVAELACHLVELEEAAIHRGASEADARRQALDALNAASFLPLSKRPRARLGGGYVHDVRV
Ga0207704_1133561023300025938Miscanthus RhizosphereMPDRELRSWKSLVRERADREWRELSLEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLELSKRPRSR
Ga0207691_1069712043300025940Miscanthus RhizosphereMRDRDLAQWKVLVRERAERESRELACDVVAELACHLVELEEAAIHKGASEADARRQALDALNAASFLPLSKRPRAR
Ga0207689_1057363633300025942Miscanthus RhizosphereMRDRQMRHWRTLVRERANREWRELSLDVVDELACHLAELQASATGRGASDDEARRIALEALDSASFLELSKRPRARHGGGYAHDVRVAIRQLIATPVVSAVAVL
Ga0207703_1135002333300026035Switchgrass RhizosphereMRDRHMRQWRTLVRERANREWRELSLDVVDELACHLAELEASAIRRGASDGEARQLALDALSSASFLELSKRPRARHGG
Ga0207708_1067997633300026075Corn, Switchgrass And Miscanthus RhizosphereMRDRDLRRWRSLVRARAEREWRELSVEVVDELACHLADLHADAIARGAADDEAQQIALDTLNAASFLE
Ga0207675_10248774713300026118Switchgrass RhizosphereMRDRQMRQWRTLVRERANREWRELSLDVVDELACHLAELQASATRRGASDDEARQVALDALNSASFLELSKRPRARHGGGYAHDVRVAIRQLIATPVVSAVAV
Ga0209234_129899413300026295Grasslands SoilMRDRDLRQWKALVREHANREWRELSLEVVDELACHLAELHAAAIRDGASEADARQMALDTLNAASFLELSKRPRS
Ga0209239_133322413300026310Grasslands SoilMRDRLMRQWRTLIRERANRQWRELSLDVVDELACHLSDLQESSIRLGASDEEARQIALDALNAASFLELSRRPRARYG
Ga0209470_129740713300026324SoilMRDRSLREWRALVRDRADREWRALSPDVVDELACHLADLHASALGNGASEEAARRDALDALNAASFLEVSKQPRARRFPGGHMHDIR
Ga0209058_127772023300026536SoilMRDRDLRQWKALVRERANREWRELSLEVVDELACHLADLHAAAIRAGASDGDARQKALDTLNAASFLELSKRPRARRGGGYVHDIRIAIRQLAGTPVVTIVAVLSLALGIG
Ga0209161_1028888623300026548SoilMRDRDLRRWKTLVRKRADQEWRTLSLEVIDELACHLADLHAAALDSGASDAEADRIATDALQSASFLALSKRPRARRFPVGYAHDIRIAFRQLV
Ga0209474_1052457513300026550SoilMRDRDLRRWKTLVRKRADQEWRTLSLEVIDELACHLADLHAAALDSGASDAEADRIATDALQSASFLALS
Ga0179587_1112482523300026557Vadose Zone SoilMRDRPMRQWRTLVRERANREWRELSLDVVDELACHLAELQASAIGRGASDDEARQIALDALDSASFLELSKRPRARHGGG
Ga0209811_1004567313300027821Surface SoilMRDRDLRRWRSLVRARAEREWRELSTEVVDELACHLSDLHADAIERGAAADEASRIALDTLNTASFLELSKRPRARRSPVGIVHDLR
Ga0209382_1043662713300027909Populus RhizosphereMRDRDLRQWKALVRQRADRERRELSVEVVDELACHLAEMQATAVRNGASDADGRRMALDTLNAASFLELSKR
Ga0307280_1040090623300028768SoilMRDRQMRQWRTLVRERANREWRELSLDVVDELACHLAELQASAIRRGASDAEAHQIALNALNSASFLELSKRPRARPGGGYVHDVRVAIRQLIATPVVTTVAALSLAL
Ga0247825_1007491043300028812SoilMRDRDLREWRALIRERADREWRELSPDVVDELACHLADLHAAALSGGASQAEARHRAVDALNSASFLEVS
Ga0307405_1069645133300031731RhizosphereMRDRDLRQWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGASEADARRKALDTLNAASFLELSKR
Ga0310904_1054317813300031854SoilMPDRGLRQWTALVRQRAHRDGRELSVDVVDELACHLADLHATAVRNGASDADARRMALETLSAASFLELSKRPRARSRGTAFVKSDLIYAVRGLRKKPLFTAA
Ga0307406_1077151323300031901RhizosphereMPDRELRQWKSLVRERAEREWRELSVEVIDELACHLADLHGAALRAGCTEREARQAALDTLNAASFLELSKRPRARRYPGGLVNDVRVAVRQLVSTPIV
Ga0307412_1198525723300031911RhizosphereMRDGDLRQWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGASEAEARSRALDTLNAASFLELSKRLRARPGARYLQDVGIVENRFQ
Ga0310885_1033903023300031943SoilMRDRDLQQWKALVRQRADGERRELTVDVVDELACHLADLHATAVRNGASDADARRMALDTLNAASFLELSKRPRARSRGTLFMKSDLTYAVRGLRKKPLFTA
Ga0307409_10101448123300031995RhizosphereMRDRDLREWKALVWQRADREGRELSMDVVDELACHLADLHATAVRRGASDADARRMALETLNAASFLELSKRARSRPRGATFVKSDLVYAVRGLRKKPLFTVAAV
Ga0308176_1252897123300031996SoilMRDRDLRQWKALVRERANREWRELSLEVVDELACHLADLYAAAIRDGGSEVDARQLALDTLNAASFLELSKRPRTRRAGGYVHD
Ga0310903_1058817913300032000SoilMRDRELREWRTLIRERADREWRELSPDVVDELACHLAELHAAALANGASQADARHRALDTLNAASFLEVARRPRARHRPTGYVQDVRLAVRQLRASPLVSA
Ga0307416_10072458813300032002RhizosphereMRDGDLRQWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGASEAEARRRALDTLNAASFLELSKRLRARPRARYLQDVGIVE
Ga0307411_1229295523300032005RhizosphereMRDRDLRQWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGASEADARRKALDTLNAASFLELSKRPRARSRGTVFMTRDLIY
Ga0310902_1099347713300032012SoilMPDRGLRQWTALVRQRAHRDGRELSVDVVDELACHLADLHATAVRNGASDADARRMALETLSAASFLELSKRPRARSRGTAFVKSDLIYAV
Ga0310906_1028343813300032013SoilMRDRDLRQWKALVRQRADRERRELSVDVVDELACHLADLHATAVRNGASDADARRMALDTLNAASFLELSKRPRARSRGTVFMTSDLIYAVRGLRKKPLFTAAAVLTL
Ga0310890_1012744513300032075SoilMRDRNVREWRTLIRERADREWRELSPEVVEELACHLAELHAAALTAGASEADARRRALDTLNAASFLEVSRR
Ga0306924_1078488533300032076SoilMRDRELRKWRALVRDRADREWRQLSLDVVDELATHLADLHAAALRRGATGQEADAAAIAALHAASLVDVSKRPRAKRIQGGHVHDL
Ga0307470_1039512333300032174Hardwood Forest SoilMPDRELRHWKSLVRERADRDWRELSLEVVDELACHLADLHAAALRGGSTEHQARQAALDALNAASFLDLSRRPRSRRGVGYGHDVRIALRQMIATPIVST
Ga0373958_0072066_531_7673300034819Rhizosphere SoilMRDRDLRRWRSLVRARAKHEWRELSLEVVDELACHLADLHADAIARGAADEEAYRIALETLNTASFLELSKRPRARRGV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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