Metagenome / Metatranscriptome Family F069252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	57 residues
Representative Sequence	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERAMKDVIEYRRSKGITEVGGLPAAF
Number of Associated Samples	85
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.61 %
% of genes near scaffold ends (potentially truncated)	24.19 %
% of genes from short scaffolds (< 2000 bps)	77.42 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.806 % of family members)
Environment Ontology (ENVO)	Unclassified (45.161 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.516 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07244	POTRA	6.45
PF04366	Ysc84	5.65
PF09537	DUF2383	4.03
PF00072	Response_reg	2.42
PF03631	Virul_fac_BrkB	2.42
PF01548	DEDD_Tnp_IS110	2.42
PF04229	GrpB	1.61
PF01842	ACT	1.61
PF13517	FG-GAP_3	1.61
PF00082	Peptidase_S8	1.61
PF12704	MacB_PCD	1.61
PF00106	adh_short	0.81
PF00873	ACR_tran	0.81
PF00581	Rhodanese	0.81
PF00534	Glycos_transf_1	0.81
PF05977	MFS_3	0.81
PF13545	HTH_Crp_2	0.81
PF08308	PEGA	0.81
PF00589	Phage_integrase	0.81
PF13420	Acetyltransf_4	0.81
PF07332	Phage_holin_3_6	0.81
PF16640	Big_3_5	0.81
PF01551	Peptidase_M23	0.81
PF07589	PEP-CTERM	0.81
PF13520	AA_permease_2	0.81
PF12840	HTH_20	0.81
PF11706	zf-CGNR	0.81
PF07274	DUF1440	0.81
PF02861	Clp_N	0.81
PF08734	GYD	0.81
PF11329	DUF3131	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	5.65
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.42
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.42
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.61
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.81
COG3477	Uncharacterized membrane protein YagU, involved in acid resistance, DUF1440 family	Function unknown [S]	0.81
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.06 %
Unclassified	root	N/A	41.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.06 %
Unclassified	root	N/A	41.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.06 %
Unclassified	root	N/A	41.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.90 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.19 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.87 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.19 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.42 %
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.65 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.81 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.81 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.81 %
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.19 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.81 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.81 %
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.19 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.81 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.81 %
Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02I9UM1	Not Available	530	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105618197	Not Available	1423	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1004536	All Organisms → cellular organisms → Bacteria → Acidobacteria	2562	Open in IMG/M
3300000955\|JGI1027J12803_100929707	Not Available	1257	Open in IMG/M
3300000955\|JGI1027J12803_105099595	Not Available	1073	Open in IMG/M
3300003322\|rootL2_10358627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300004114\|Ga0062593_100542124	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300004114\|Ga0062593_101997698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300004156\|Ga0062589_100762910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	870	Open in IMG/M
3300004479\|Ga0062595_100933820	Not Available	736	Open in IMG/M
3300004479\|Ga0062595_101146219	Not Available	684	Open in IMG/M
3300004633\|Ga0066395_10117295	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300004643\|Ga0062591_102881090	Not Available	510	Open in IMG/M
3300004803\|Ga0058862_10854669	Not Available	529	Open in IMG/M
3300005330\|Ga0070690_100744701	Not Available	756	Open in IMG/M
3300005332\|Ga0066388_104454121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300005332\|Ga0066388_105508376	Not Available	641	Open in IMG/M
3300005334\|Ga0068869_100004416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	8741	Open in IMG/M
3300005367\|Ga0070667_101122584	Not Available	735	Open in IMG/M
3300005434\|Ga0070709_10415136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300005435\|Ga0070714_100376254	Not Available	1338	Open in IMG/M
3300005436\|Ga0070713_100024835	All Organisms → cellular organisms → Bacteria	4676	Open in IMG/M
3300005439\|Ga0070711_100198140	Not Available	1548	Open in IMG/M
3300005439\|Ga0070711_101856513	Not Available	529	Open in IMG/M
3300005533\|Ga0070734_10236231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1049	Open in IMG/M
3300005538\|Ga0070731_10641881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300005591\|Ga0070761_10049847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2355	Open in IMG/M
3300005602\|Ga0070762_10027194	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300005610\|Ga0070763_10345727	Not Available	827	Open in IMG/M
3300005764\|Ga0066903_100050016	All Organisms → cellular organisms → Bacteria	5074	Open in IMG/M
3300005764\|Ga0066903_100660504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1831	Open in IMG/M
3300005764\|Ga0066903_104251752	Not Available	766	Open in IMG/M
3300005764\|Ga0066903_105901035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300005841\|Ga0068863_100051037	All Organisms → cellular organisms → Bacteria	3921	Open in IMG/M
3300006173\|Ga0070716_100540893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300006173\|Ga0070716_101424864	Not Available	564	Open in IMG/M
3300006175\|Ga0070712_100001302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15095	Open in IMG/M
3300006175\|Ga0070712_100078731	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300006175\|Ga0070712_102046236	Not Available	501	Open in IMG/M
3300006176\|Ga0070765_100210277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300006806\|Ga0079220_10796379	Not Available	714	Open in IMG/M
3300006852\|Ga0075433_11858345	Not Available	517	Open in IMG/M
3300006854\|Ga0075425_102966582	Not Available	519	Open in IMG/M
3300006954\|Ga0079219_10091516	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300009177\|Ga0105248_12674713	Not Available	569	Open in IMG/M
3300009792\|Ga0126374_11790116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010043\|Ga0126380_10208504	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300010048\|Ga0126373_10051227	All Organisms → cellular organisms → Bacteria	3670	Open in IMG/M
3300010048\|Ga0126373_10059970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3408	Open in IMG/M
3300010048\|Ga0126373_10557291	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300010048\|Ga0126373_10608484	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300010048\|Ga0126373_11604364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300010048\|Ga0126373_13016143	Not Available	525	Open in IMG/M
3300010358\|Ga0126370_10048804	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300010358\|Ga0126370_10388513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300010358\|Ga0126370_11561225	Not Available	630	Open in IMG/M
3300010358\|Ga0126370_12371058	Not Available	526	Open in IMG/M
3300010359\|Ga0126376_11408046	Not Available	722	Open in IMG/M
3300010361\|Ga0126378_10045708	All Organisms → cellular organisms → Bacteria	4044	Open in IMG/M
3300010361\|Ga0126378_12596311	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300010366\|Ga0126379_13794459	Not Available	506	Open in IMG/M
3300010376\|Ga0126381_100041777	All Organisms → cellular organisms → Bacteria	5565	Open in IMG/M
3300010376\|Ga0126381_100173421	All Organisms → cellular organisms → Bacteria → Acidobacteria	2857	Open in IMG/M
3300010376\|Ga0126381_100552036	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300010376\|Ga0126381_103291418	Not Available	637	Open in IMG/M
3300010376\|Ga0126381_103540605	Not Available	613	Open in IMG/M
3300010376\|Ga0126381_104602152	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010937\|Ga0137776_1362234	Not Available	837	Open in IMG/M
3300012212\|Ga0150985_109926780	Not Available	836	Open in IMG/M
3300012469\|Ga0150984_119887234	Not Available	1723	Open in IMG/M
3300012971\|Ga0126369_10562271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300013104\|Ga0157370_10333391	Not Available	1398	Open in IMG/M
3300013296\|Ga0157374_11461537	Not Available	707	Open in IMG/M
3300014969\|Ga0157376_11156543	Not Available	801	Open in IMG/M
3300016387\|Ga0182040_11656435	Not Available	546	Open in IMG/M
3300017970\|Ga0187783_10385526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300017970\|Ga0187783_10483552	Not Available	898	Open in IMG/M
3300020069\|Ga0197907_10575805	Not Available	877	Open in IMG/M
3300020078\|Ga0206352_11152083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300020078\|Ga0206352_11191389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1028	Open in IMG/M
3300020081\|Ga0206354_10724705	Not Available	753	Open in IMG/M
3300020579\|Ga0210407_10010767	All Organisms → cellular organisms → Bacteria	6817	Open in IMG/M
3300020580\|Ga0210403_10593311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300021180\|Ga0210396_10030567	All Organisms → cellular organisms → Bacteria	4982	Open in IMG/M
3300021180\|Ga0210396_10846189	Not Available	782	Open in IMG/M
3300021401\|Ga0210393_10151162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1866	Open in IMG/M
3300021402\|Ga0210385_10062276	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300021407\|Ga0210383_11669211	Not Available	522	Open in IMG/M
3300021420\|Ga0210394_10909398	Not Available	765	Open in IMG/M
3300021474\|Ga0210390_10029219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4491	Open in IMG/M
3300021474\|Ga0210390_10053787	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3312	Open in IMG/M
3300021560\|Ga0126371_10014577	All Organisms → cellular organisms → Bacteria	7164	Open in IMG/M
3300021560\|Ga0126371_10059098	All Organisms → cellular organisms → Bacteria → Acidobacteria	3692	Open in IMG/M
3300021560\|Ga0126371_10679233	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_61_10	1178	Open in IMG/M
3300021560\|Ga0126371_10936758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1009	Open in IMG/M
3300021560\|Ga0126371_11123689	Not Available	924	Open in IMG/M
3300021560\|Ga0126371_11844264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300021560\|Ga0126371_12151789	Not Available	673	Open in IMG/M
3300021560\|Ga0126371_12748738	Not Available	597	Open in IMG/M
3300021560\|Ga0126371_12824375	Not Available	589	Open in IMG/M
3300022467\|Ga0224712_10609053	Not Available	533	Open in IMG/M
3300022728\|Ga0224566_100402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3632	Open in IMG/M
3300025315\|Ga0207697_10283576	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300025905\|Ga0207685_10399049	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300025907\|Ga0207645_10492000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300025916\|Ga0207663_11288067	Not Available	589	Open in IMG/M
3300025928\|Ga0207700_10000925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16851	Open in IMG/M
3300025934\|Ga0207686_11669366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	527	Open in IMG/M
3300025938\|Ga0207704_10782866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300027775\|Ga0209177_10176726	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300027853\|Ga0209274_10033988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2374	Open in IMG/M
3300027853\|Ga0209274_10159385	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300028798\|Ga0302222_10127705	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031057\|Ga0170834_109152601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300031446\|Ga0170820_10030527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300031715\|Ga0307476_10012049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5431	Open in IMG/M
3300031720\|Ga0307469_11035267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300031740\|Ga0307468_100047180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2217	Open in IMG/M
3300031866\|Ga0316049_124641	Not Available	502	Open in IMG/M
3300031871\|Ga0316036_116126	Not Available	538	Open in IMG/M
3300031912\|Ga0306921_12637458	Not Available	518	Open in IMG/M
3300032180\|Ga0307471_101890854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300032770\|Ga0335085_10047126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5858	Open in IMG/M
3300032770\|Ga0335085_10747423	Not Available	1082	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.29%
Host-Associated	Host-Associated	13.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.48%
Plants	Host-Associated → Plants	12.90%
Aquatic	Environmental → Aquatic	0.81%
Human	Host-Associated → Human	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Peat	Environmental → Terrestrial → Peat	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%
Digestive System	Host-Associated → Human → Digestive System	0.81%
Rhizome	Host-Associated → Plants → Rhizome	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.87%
Loam	Environmental → Terrestrial → Soil → Loam	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.42%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022728	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_02571690	2170459010	Grass Soil	MPDXKTLATILAICDLIKHNGSGVGTAVEAYERAMNDVIEYRRSKGLTELGGFVRPCTILMR
INPhiseqgaiiFebDRAFT_1056181972	3300000364	Soil	MPDDNTLATILTICDLIKHNGDGVGAAVQAYEQAMKDVMQYRRSKGLTEVGGVPGAA*
AP72_2010_repI_A01DRAFT_10045362	3300000579	Forest Soil	MPDDATLATILAICDLMKNGGSGVESAVQAYQRAMKDVMAYRRAKGITEVGGVPRD*
JGI1027J12803_1009297072	3300000955	Soil	MPDDKTLATILAICDLIKHNESDVGTAVEAYERAMIDVIEYRRSKGLTGVGGLPGPVQS*
JGI1027J12803_1050995951	3300000955	Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERAMNDVIEYRRSKGLTEVGGLPSPVQA*
rootL2_103586273	3300003322	Sugarcane Root And Bulk Soil	MPDDKTVATILAICDLIKHNGSGVATAVEAYERAMKDVIEYRRSRGLTEVGGLPSE*
Ga0062593_1005421243	3300004114	Soil	MPDDKTLATILVICDLIKHNGSGVGTAVEAYERAMKDVIEYRRSKGITEVGGLPAA*
Ga0062593_1019976982	3300004114	Soil	MPDDETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA*
Ga0062589_1007629102	3300004156	Soil	MRTIMPDDETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA*
Ga0062595_1009338201	3300004479	Soil	MPDDKTLATILAVCDLIEHHGSGVEAAVKAYERAMKDVIEYRRSKGMTEVGGLSA*
Ga0062595_1011462191	3300004479	Soil	MPDDNTLATILAICDLIKNNGNGVGAAVEAYERAMKDVLEYRQSKGLTEVGGVPGSR*
Ga0066395_101172952	3300004633	Tropical Forest Soil	MPDDQTLATILAICDLMKHNRNGVEDAVEAYEQAMRDVLHYRRSHGLTEVGGVPAVR*
Ga0062591_1028810901	3300004643	Soil	MPDDKTLATILAICDLIKHNGSGVGTVVEAYERAMKEVIEYRRSKGLTEVGGLPGRVPS*
Ga0058862_108546691	3300004803	Host-Associated	RITMPDDKTLATILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA*
Ga0070690_1007447011	3300005330	Switchgrass Rhizosphere	NTVATILAICDLIKHNGTGVETAIEAYQRALKDVIEYRRSRGMTELGGLPSE*
Ga0066388_1044541211	3300005332	Tropical Forest Soil	MPDDQTLATILAICDLMKHNGNGVEDAVEAYEQAMREVLHYRRSHGLTEVGGVPAVR*
Ga0066388_1055083761	3300005332	Tropical Forest Soil	MPDDRTLATILAICDLIKHNETGVGTAVEAYERALKDVIEYRRSKGITEVGGLPAAS*
Ga0068869_10000441611	3300005334	Miscanthus Rhizosphere	MPDDNTVATILAICDLIKHNGTGVETAIEAYQRALKDVIEYRRSRGMTELGGLPSE*
Ga0070667_1011225841	3300005367	Switchgrass Rhizosphere	ATILAICDLIKHNGTGVETAIEAYQRALKDVIEYRRSRGMTELGGLPSE*
Ga0070709_104151362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDNTLATILAICDLIKHNGNGVGAAVDAYERAMKDIMEYRRSKGLTEVGGVPSGR*
Ga0070714_1003762544	3300005435	Agricultural Soil	MPDDNTIATILAICELINHNENGVGAAVEAYERAMKDVLDYRRSKGLTEVGGVPAAR*
Ga0070713_1000248358	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDKTLATILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA*
Ga0070711_1001981402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDNTLATILAICDLIKHNGNGVGAAVQAYERAMKDVLEYRRSKGLTEVGGVPGSRRLRK*
Ga0070711_1018565132	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDKTLATILAICDLIKHNGSGVGAAVEAYERAMNDVIEYRRSKGLTEVGGLSGPTRS*
Ga0070734_102362312	3300005533	Surface Soil	IIMPDDKTLATILAICDLIKHNGNGVETAVEAYERAMKEAIEYRRSKGLTEVGGLAA*
Ga0070731_106418812	3300005538	Surface Soil	MPDDQTLAMILAICDLMRQNGSGAETAVAAYERAMKEVLEYRRSKGLTEVGGVPA*
Ga0070761_100498472	3300005591	Soil	MPDDQTLATILTICELMKQSGNGVKTAVEAYEHALKEVIQYRRSIGLTEVGGLPAAD*
Ga0070762_100271942	3300005602	Soil	MPDDQTLATILTICDLMTRGENGVETAVDAYERAMKDVIQYRRSVGQTEVGGLPAAD*
Ga0070763_103457272	3300005610	Soil	MPDDQTLATILTICELMKQSGNGVKTAVEAYEHALKEVVQYRRSIGLTEVGGLPAAD*
Ga0066903_1000500161	3300005764	Tropical Forest Soil	KTLAMILAICDLMKHNGSGVGTAIEAYERAMRDVLEYRRSKGLTEVGGLPSGR*
Ga0066903_1006605041	3300005764	Tropical Forest Soil	MPDDNTLATILAICDLIKHNGNGVGAAVEAYERAMKDVMEYRRSMGLTEVGGVPGSR*
Ga0066903_1042517521	3300005764	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERALKDVVEYRRSKGITEVGGLPAAS*
Ga0066903_1059010352	3300005764	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAIEAYERAMRDVIEYRRSKGLTEVGGLPGGR*
Ga0068863_1000510374	3300005841	Switchgrass Rhizosphere	MPDDNTIATILAICDLIKHNGGGVETAIEAYERALKDVIEYRRSRGMTELGGLPSE*
Ga0070716_1005408932	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDQTLAMILAICDLMRQNGSGAETAVAAYERAMKEVLEYRRSKGLTEVGGDPLEAHKV
Ga0070716_1014248641	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDQTLATILTICELMKQGGNGVKTVVEVYEHAMKEVIQYRRSVGLTEVGGLPRVE*
Ga0070712_1000013028	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDQTLAMILAICDLMRQNGSAAETAVAAYERAMKEVLEYRRSKGLTEVGGVPA*
Ga0070712_1000787312	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDNTLATILAICDLIKHNGNGVGAAVQAYERAMKDVLEYRRSKGLTEVGGVPGSR*
Ga0070712_1020462362	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDATLATILAICDLMKNDGSGVESAVQAYQRAMKDVMAYRRAKGITEVGGVPRE*
Ga0070765_1002102771	3300006176	Soil	MPDDQTLATILTICDLMTRGENGVETAVDAYERAMKDVIQYRRSVGQTEVG
Ga0079220_107963792	3300006806	Agricultural Soil	MPDDKTLATILVICDLIEHNGSGVGTAVEAYERAMKDVIEYRRSKGITEVGGLPAA*
Ga0075433_118583451	3300006852	Populus Rhizosphere	RIIMPDDKTLATILAVCDLIEHHGSGVEAAVKAYERAMKDVIEYRRSKGMTEVGGLSA*
Ga0075425_1029665821	3300006854	Populus Rhizosphere	MPDDNTLATILAICDLIKHNGNGVGAAVEAYERGMKDVLEYRRSKGLTEVGGVPGSR*
Ga0079219_100915161	3300006954	Agricultural Soil	MPDDKTLATILVICDLIKHNGSGVGTAVEAYERAMKDVIEYRRSKGITDVGGLPAA*
Ga0105248_126747131	3300009177	Switchgrass Rhizosphere	MPDDETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITGVGGLSA*
Ga0126374_117901162	3300009792	Tropical Forest Soil	LRRFSMPDDKTLAMILAICDLMKHNGSGVGTAIEAYERAMRDVLEYRRSKGLTEVGGLPSGR*
Ga0126380_102085043	3300010043	Tropical Forest Soil	MPDDQTLATILAICDLMKHNRNGVEDAVDAYEQAMREVLQYRRSHGLTEVGGVPAVR*
Ga0126373_100512275	3300010048	Tropical Forest Soil	MPDDNTLATILAICDLIKHNGSGVDSAVEAYQRAMKNVMEYRRAKGITEVGGVPIE*
Ga0126373_100599701	3300010048	Tropical Forest Soil	MPDDKTVATILAICDLIKHNGSGVETAVEAYQRAMKDVIEYRRSRGMTELGGLPSE*
Ga0126373_105572911	3300010048	Tropical Forest Soil	LQLKESLMPDDQTLATILAICDLMKHNRNGVEDAVEAYEQAMREVLQYRRSHGLTEVGGVPAVR*
Ga0126373_106084841	3300010048	Tropical Forest Soil	ILAICDLMKNGGSGVESAVQAYQRAMKDVMAYRRAKGITEVGGVPRD*
Ga0126373_116043641	3300010048	Tropical Forest Soil	RVLMPDDQTLATILAICDLMKHNGDGVKSAVEAYERAMREVLQYRRSHDLTEVGGVPLVK
Ga0126373_130161431	3300010048	Tropical Forest Soil	MPDDQTLATILAICDLMKHNGNGVKTAVEAYERAMREVIKYRRSKGLTEVGGVPGVK*
Ga0126370_100488044	3300010358	Tropical Forest Soil	MPDDQTLATILAICDLMKHNRNGVEDAVEAYEQAMRDVLHYRRSHGLTEVGGVPAVK*
Ga0126370_103885132	3300010358	Tropical Forest Soil	MPDDKTLATILAICDLMKHNGSGVGTAIEAYERAMRDVLEYRRSKGLTEVGGLPSGR*
Ga0126370_115612252	3300010358	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGAAVEAYERALKDVIEYRRSKGLTEVGGLPAA*
Ga0126370_123710581	3300010358	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERAMNDVIEYRRSKGITEVGGLPAAS*
Ga0126376_114080461	3300010359	Tropical Forest Soil	MIMPDDKTVATILAICDLIKHNGSGVETAVEAYQRAMKDVIEYRRSRGITEVGGLPAAF*
Ga0126378_100457084	3300010361	Tropical Forest Soil	MEAGVRQTLATILTICDLIKRNGSGIGTAIEAYERAMKDVIEYRRSMGFTEVGGVPAGYRTS*
Ga0126378_125963112	3300010361	Tropical Forest Soil	ILAICDLMKHNRNGVEDAVDAYEQAMREVLQYRRSHGLTEVGGVPAVR*
Ga0126379_137944591	3300010366	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERAMKDVIEYRRSKGITEVGGLPAAF*
Ga0126381_1000417773	3300010376	Tropical Forest Soil	MPDDDTLATILAICDLMKHNGSGVGAAVEAYQRAMKDVVEYRRSKGLTEVGGVPAR*
Ga0126381_1001734212	3300010376	Tropical Forest Soil	MPDDKTLAMILAICDLVKHNGSGVATAVEAYERAMKDVIEYRRSKGMTEVGGLPAA*
Ga0126381_1005520363	3300010376	Tropical Forest Soil	MPDDQTLATILAICDLMKHNRNGVEDAVEEYEQAMRDVLHYRRSHGLTEVGGVPAVR*
Ga0126381_1032914181	3300010376	Tropical Forest Soil	LRRIFMPDDKTLAMILAICDLMKHNASGVRTAVEAYERAMKDVVEYRRSMGITEVGGLPSGRAS*
Ga0126381_1035406051	3300010376	Tropical Forest Soil	MPDDKTLAMILAICDLMKHNGSGVGTAIEAYEGAMRDVLEYRRSKGLTEVGGLPSGR*
Ga0126381_1046021521	3300010376	Tropical Forest Soil	DQTLATILAICDLMKHNGNGVEDAVEAYEQAMREVLRYRRTHGLTEVGGVPAVR*
Ga0137776_13622342	3300010937	Sediment	MPEDNTISTILAICDLLKHNGNGVGAAVEAYERAMKDVMEYRRSQGLTEVGGVPTR*
Ga0150985_1099267802	3300012212	Avena Fatua Rhizosphere	MPDDKTVATILTICDLIKHNGSGVETAIEAYQRAIKDVIEYRRSKGMTELGGLPRE*
Ga0150984_1198872343	3300012469	Avena Fatua Rhizosphere	LFIEEDFMPDDKTVATILTICDLIKHNGSGVETAIEAYQRAIKDVIEYRRSKGMTELGGLPRE*
Ga0126369_105622711	3300012971	Tropical Forest Soil	MPDDETLATILAICDLIKHNGSGVGTALEAYDRAMKDVIEYRRSKGLTELGGLPGHARS*
Ga0157370_103333913	3300013104	Corn Rhizosphere	TILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA*
Ga0157374_114615371	3300013296	Miscanthus Rhizosphere	MPDDNTLATILAICDLIKNNGNGVGAAVEAYERAMKDVLEYRRSKGLTEVGGVPR*
Ga0157376_111565431	3300014969	Miscanthus Rhizosphere	MPDDNTLATILAICDLIKHNGNGVGAAVEAYERAMKDVLEYRRSKGLTEVGGVPGSR*
Ga0182040_116564351	3300016387	Soil	PFRGGLPMPDDQTLATILAICDLMKQNGSGVQAALEAYERAMKDVLEYRRCQGLTEVGGVPTMK
Ga0187783_103855262	3300017970	Tropical Peatland	MPDDQTLAMILTICDLVGREKKDIKTAVESYGRVMKEVIEYRRSVGETEVGGLPTIK
Ga0187783_104835521	3300017970	Tropical Peatland	MPEDQILATILAICDLVRNNGSDVKTAVEAYERAMKDIIEYRRSRELTEVGGLPTK
Ga0197907_105758051	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDKTLATILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA
Ga0206352_111520831	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	ETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA
Ga0206352_111913891	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDNTVATILAICDLIKHNGTGVETAIEAYQRALKDVIEYRRSRGMTELGGLPSE
Ga0206354_107247052	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	DDKTLATILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA
Ga0210407_100107677	3300020579	Soil	MPDDQTLATILTICELMKQNGNGVKTAVEAYEHALKEVIQYRRSIGLTEVGGLPAAD
Ga0210403_105933112	3300020580	Soil	MPDDQTLATILTICELMRRSENGVKTAVDAYDRAMKDVIHYRRSVGQTELGGLPAAD
Ga0210396_100305673	3300021180	Soil	VHRLSGPFATILTICDLMTRGENGVETAVDAYERAMKDVIQYRRSVGQTEVGGLPAAD
Ga0210396_108461891	3300021180	Soil	MPDDQTLATILTICDLMTRSENGVKTAVDAYERAMKDVIQYRHSVGQTEVGGLPAAD
Ga0210393_101511621	3300021401	Soil	MPDDQTLATILTICDLMTRGENGVETAVDAYERAMKDVIQYRRSVGQTEVGGLPAAD
Ga0210385_100622762	3300021402	Soil	QTLATILTICDLMTRSENGVKTAVDAYERAMKDVIQYRHSVGQTEVGGLPAAD
Ga0210383_116692111	3300021407	Soil	MPDDQTLATILTICELMKQSGNGVKVTVEAYEHAMKEVIQYRRSVGLTEVGVSLVE
Ga0210394_109093981	3300021420	Soil	MPDDNTLATILAICDLIKRNGNGVGVAVEAYERAMKDVMEYRRSKGLTEVGGVPSGR
Ga0210390_100292194	3300021474	Soil	MPDDQTLATILTICELMKQSGNGVKTAVEAYEHALKEVIQYRRSIGLTEVGGLPAAD
Ga0210390_100537873	3300021474	Soil	GPMPDDQTLATILTICDLMTRGENGVETAVDAYERAMKDVIQYRHSVGQTEVGGLPAAD
Ga0126371_100145771	3300021560	Tropical Forest Soil	MPDDKTVATILAICDLIKHNGSGVETAVEAYQRAMKDVIEYRRSRGMTELGGLPSE
Ga0126371_100590983	3300021560	Tropical Forest Soil	MPDDQTLATILAICDLMKHNRNGVEDAVEAYEQAMRDVLHYRRSHGLTEVGGVPAVR
Ga0126371_106792332	3300021560	Tropical Forest Soil	MPDDQTLATILAICDLMKQNGSGVQAALEAYERAMKDVLEYRRCQGLTEVGGVPTMK
Ga0126371_109367582	3300021560	Tropical Forest Soil	MPDDNTLATILAICDLMKHNGSGVGAAVEAYQRAMKDVVEYRRSEGLTEVGGLPSR
Ga0126371_111236892	3300021560	Tropical Forest Soil	MPDDATLATILAICDLMKNGGSGVESAVQAYQRAMKDVMAYRRAKGITEVGGVPRD
Ga0126371_118442642	3300021560	Tropical Forest Soil	MPDDQTLATILAICDLMKHNGNGVEDAVEAYEQAMREVLRYRRTHGLTEVGGVPAVR
Ga0126371_121517892	3300021560	Tropical Forest Soil	VRQTLATILTICDLIKRNGSGIGTAIEAYERAMKDVIEYRRSMGFTEVGGVPAGYRTS
Ga0126371_127487381	3300021560	Tropical Forest Soil	MPDDNTLATILAICDLIKHNGSGVDSAVEAYQRAMKNVMEYRRAKGITEVGGVPIE
Ga0126371_128243751	3300021560	Tropical Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERALKDVVEYRRSKGITEVGGLPAAS
Ga0224712_106090532	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	RITMPDDKTLATILAICDLLEHNGSGVEVAVKAYERAMKEVIEYRRSKGITEIGGLSA
Ga0224566_1004022	3300022728	Plant Litter	MPDDQTLAMILAICGLMRQNGSGVETAVAAYEGAMKEVLDYRRSKGLTEVGGLPA
Ga0207697_102835762	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIMPDDETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA
Ga0207685_103990491	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	HGLFLREITMPDDATLATILAICDLMKNDGSGVESAVQAYQRAMKDVMAYRRAKGITEVGGVPRE
Ga0207645_104920001	3300025907	Miscanthus Rhizosphere	MPDDETLATILTICDLIEHNRSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA
Ga0207663_112880672	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDNTLATILAICDLIKHNGSGVGAAVEAYERAMNDVIEYRRSKGLTEVGGLSGAVRS
Ga0207700_100009257	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDQTLAMILAICDLMRQNGSAAETAVAAYERAMKEVLEYRRSKGLTEVGGVPARPA
Ga0207686_116693661	3300025934	Miscanthus Rhizosphere	MPDDNTVATILAICDLIKHNGTGVETAIEAYQRALKDVIEYRRSRGMTELG
Ga0207704_107828662	3300025938	Miscanthus Rhizosphere	MPDDKTLATILAVCDLIEHHGSGVEAAVKTYERAMKDVIDYRRSKGITEVGGLSA
Ga0209177_101767262	3300027775	Agricultural Soil	MPDDKTLATILVICDLIKHNGSGVGTAVEAYERAMKDVIEYRRSKGITDVGGLPAA
Ga0209274_100339881	3300027853	Soil	MPDDQTLATILTICELMKQSGNGVKTAVEAYEHALKEVVQYRRSIGLTEVGGLPAAD
Ga0209274_101593851	3300027853	Soil	PNTTILHLKSHGLGGPMPDDQTLATILTICELVKQSGNGVKTAVEAYEHALKEVIQYRRSIGLTEVGGLPAAD
Ga0302222_101277052	3300028798	Palsa	MPDDQTLATILAICDLIKRNGTGVKVALESYEQAMKEVIEYRRSQGLTEVGGLPAAK
Ga0170834_1091526012	3300031057	Forest Soil	MPDDQTLATILTVCELMRHSESGVETAIETYERAMKDVIQYRRSVGQTEVGGLPAMK
Ga0170820_100305272	3300031446	Forest Soil	MPDDQTLATILTICELMKQSGNGVKTAVEAYEHAMTEVIQYRRSVGQTEIGGLPAAD
Ga0307476_100120491	3300031715	Hardwood Forest Soil	MPDDQTLATILTICDLMKQSGNGVKTAVESYQHAMKQVIQYRRSVGQTEIGGLPPVE
Ga0307469_110352672	3300031720	Hardwood Forest Soil	MPDDQTLATILTICELMKQGGNGVKTAVEAYEHAMKEVIQYRRSVGLTEVGGLPRVE
Ga0307468_1000471802	3300031740	Hardwood Forest Soil	MPDDKTLATILAICDLIKHNGSGVGTAVEAYERAMNDVIEYRRSKGLTEVGGLPSPVQA
Ga0316049_1246411	3300031866	Soil	AMPDDQTLAMILAICGLMRQNGSGVETAVAAYEGAMKEVLDYRRSKGLTEVGGLPA
Ga0316036_1161261	3300031871	Soil	LRRLAMPDDQTLAMILAICGLMRQNGSGVETAVAAYEGAMKEVLDYRRSKGLTEVGGLPA
Ga0306921_126374581	3300031912	Soil	MPDDTTLATILAICDLMKSHGSGVESAVEAYQRAMKDVMDYRRAKGITEVG
Ga0307471_1018908542	3300032180	Hardwood Forest Soil	MPDDQTLATILTICELMKQGGNGVKTAAETYEHAMKEVIQYRRSIGLTEVGGLPQVE
Ga0335085_100471268	3300032770	Soil	MPDDQTLATILAICDLIKHNGEGVGAAVQAYEQAMKSVLEYRRSKGLTEVGGVPGAA
Ga0335085_107474232	3300032770	Soil	LATILAICDLMKNDGSGVESAIQAYQRAMKDVMAYRRAKGITEVGGVPGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences