Metagenome / Metatranscriptome Family F069303

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069303
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	114 residues
Representative Sequence	VTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.77 %
% of genes near scaffold ends (potentially truncated)	43.55 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.484 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.484 % of family members)
Environment Ontology (ENVO)	Unclassified (41.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.968 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 78.63% β-sheet: 0.00% Coil/Unstructured: 21.37%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF03401	TctC	3.23
PF00313	CSD	3.23
PF04392	ABC_sub_bind	1.61
PF04055	Radical_SAM	1.61
PF01145	Band_7	0.81
PF03979	Sigma70_r1_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.23
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.61
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
All Organisms	root	All Organisms	39.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
cellular organisms	root	All Organisms → cellular organisms	39.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.03 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.29 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.81 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.29 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.23 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.61 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.81 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.81 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.29 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.42 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	1.61 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.42 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	1.61 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.42 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	1.61 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.29 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.42 %
Ensifer sp. IC3342	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	1.61 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig969279	Not Available	511	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1040356	Not Available	675	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10043052	Not Available	1190	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10085206	Not Available	789	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1012353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1627	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10058164	Not Available	852	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1047643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	605	Open in IMG/M
3300001545\|JGI12630J15595_10031547	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300002910\|JGI25615J43890_1035736	Not Available	818	Open in IMG/M
3300004281\|Ga0066397_10008995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	1233	Open in IMG/M
3300005165\|Ga0066869_10046273	Not Available	753	Open in IMG/M
3300005332\|Ga0066388_100453000	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
3300005332\|Ga0066388_102892943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300005332\|Ga0066388_105872856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300005363\|Ga0008090_10024137	Not Available	792	Open in IMG/M
3300005435\|Ga0070714_101351582	Not Available	696	Open in IMG/M
3300005445\|Ga0070708_101441711	Not Available	642	Open in IMG/M
3300005467\|Ga0070706_101459544	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300005713\|Ga0066905_102083913	Not Available	527	Open in IMG/M
3300005764\|Ga0066903_102518368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	996	Open in IMG/M
3300005764\|Ga0066903_103349034	Not Available	865	Open in IMG/M
3300006172\|Ga0075018_10001756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7311	Open in IMG/M
3300006173\|Ga0070716_101051347	Not Available	647	Open in IMG/M
3300006175\|Ga0070712_100251027	Not Available	1414	Open in IMG/M
3300006844\|Ga0075428_102336672	Not Available	550	Open in IMG/M
3300006845\|Ga0075421_101620947	Not Available	703	Open in IMG/M
3300006852\|Ga0075433_11012646	Not Available	723	Open in IMG/M
3300006854\|Ga0075425_101689062	Not Available	713	Open in IMG/M
3300009147\|Ga0114129_13507902	Not Available	501	Open in IMG/M
3300009792\|Ga0126374_11128190	Not Available	623	Open in IMG/M
3300009792\|Ga0126374_11142733	Not Available	620	Open in IMG/M
3300010043\|Ga0126380_10042256	Not Available	2401	Open in IMG/M
3300010047\|Ga0126382_10921710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300010358\|Ga0126370_10289759	Not Available	1292	Open in IMG/M
3300010358\|Ga0126370_12466662	Not Available	518	Open in IMG/M
3300010359\|Ga0126376_10779311	Not Available	931	Open in IMG/M
3300010360\|Ga0126372_10352618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1320	Open in IMG/M
3300010361\|Ga0126378_11350413	Not Available	806	Open in IMG/M
3300010362\|Ga0126377_11147300	Not Available	847	Open in IMG/M
3300010366\|Ga0126379_13024995	Not Available	563	Open in IMG/M
3300010376\|Ga0126381_104630260	Not Available	530	Open in IMG/M
3300010398\|Ga0126383_10308048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1585	Open in IMG/M
3300010398\|Ga0126383_10885459	Not Available	978	Open in IMG/M
3300010863\|Ga0124850_1041493	Not Available	1463	Open in IMG/M
3300012198\|Ga0137364_10726979	Not Available	750	Open in IMG/M
3300012202\|Ga0137363_10143212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1870	Open in IMG/M
3300012202\|Ga0137363_10392474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1155	Open in IMG/M
3300012209\|Ga0137379_10236133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1742	Open in IMG/M
3300012210\|Ga0137378_10270116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1582	Open in IMG/M
3300012361\|Ga0137360_11510542	Not Available	576	Open in IMG/M
3300012362\|Ga0137361_10118692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2327	Open in IMG/M
3300012582\|Ga0137358_10381974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300012923\|Ga0137359_10048321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3698	Open in IMG/M
3300012930\|Ga0137407_11285776	Not Available	695	Open in IMG/M
3300012971\|Ga0126369_11462058	Not Available	773	Open in IMG/M
3300012989\|Ga0164305_11556801	Not Available	588	Open in IMG/M
3300016341\|Ga0182035_11819083	Not Available	552	Open in IMG/M
3300016371\|Ga0182034_11272204	Not Available	641	Open in IMG/M
3300016371\|Ga0182034_11421688	Not Available	607	Open in IMG/M
3300016387\|Ga0182040_11426769	Not Available	587	Open in IMG/M
3300016404\|Ga0182037_11536014	Not Available	591	Open in IMG/M
3300016445\|Ga0182038_11937832	Not Available	533	Open in IMG/M
3300018027\|Ga0184605_10383593	Not Available	630	Open in IMG/M
3300018468\|Ga0066662_10449350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153	Open in IMG/M
3300021086\|Ga0179596_10181126	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300021178\|Ga0210408_10703373	Not Available	796	Open in IMG/M
3300021432\|Ga0210384_10219143	Not Available	1712	Open in IMG/M
3300021479\|Ga0210410_11443768	Not Available	581	Open in IMG/M
3300025898\|Ga0207692_10074743	Not Available	1796	Open in IMG/M
3300025910\|Ga0207684_10334462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300025939\|Ga0207665_10195776	Not Available	1471	Open in IMG/M
3300026371\|Ga0257179_1042154	Not Available	581	Open in IMG/M
3300026469\|Ga0257169_1022981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	896	Open in IMG/M
3300027521\|Ga0209524_1050812	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300027646\|Ga0209466_1085263	Not Available	638	Open in IMG/M
3300027654\|Ga0209799_1034398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1126	Open in IMG/M
3300027862\|Ga0209701_10391195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300027875\|Ga0209283_10379971	All Organisms → cellular organisms → Bacteria → Proteobacteria	923	Open in IMG/M
3300028878\|Ga0307278_10145940	Not Available	1060	Open in IMG/M
3300031543\|Ga0318516_10085299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1767	Open in IMG/M
3300031543\|Ga0318516_10098993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1646	Open in IMG/M
3300031545\|Ga0318541_10021090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3117	Open in IMG/M
3300031546\|Ga0318538_10112893	Not Available	1413	Open in IMG/M
3300031546\|Ga0318538_10474970	Not Available	677	Open in IMG/M
3300031564\|Ga0318573_10087173	Not Available	1585	Open in IMG/M
3300031572\|Ga0318515_10014633	All Organisms → cellular organisms → Bacteria → Proteobacteria	3600	Open in IMG/M
3300031572\|Ga0318515_10738337	Not Available	520	Open in IMG/M
3300031668\|Ga0318542_10042077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2034	Open in IMG/M
3300031668\|Ga0318542_10118563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1292	Open in IMG/M
3300031668\|Ga0318542_10658245	Not Available	547	Open in IMG/M
3300031679\|Ga0318561_10121445	Not Available	1388	Open in IMG/M
3300031681\|Ga0318572_10122778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1484	Open in IMG/M
3300031682\|Ga0318560_10291370	Not Available	879	Open in IMG/M
3300031719\|Ga0306917_10742577	Not Available	770	Open in IMG/M
3300031719\|Ga0306917_11308867	Not Available	560	Open in IMG/M
3300031748\|Ga0318492_10379892	Not Available	741	Open in IMG/M
3300031751\|Ga0318494_10068351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1909	Open in IMG/M
3300031751\|Ga0318494_10791526	Not Available	555	Open in IMG/M
3300031770\|Ga0318521_10429586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	789	Open in IMG/M
3300031779\|Ga0318566_10100006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	1422	Open in IMG/M
3300031779\|Ga0318566_10469138	Not Available	617	Open in IMG/M
3300031782\|Ga0318552_10644036	Not Available	540	Open in IMG/M
3300031792\|Ga0318529_10272743	Not Available	787	Open in IMG/M
3300031793\|Ga0318548_10037948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2150	Open in IMG/M
3300031796\|Ga0318576_10095823	Not Available	1349	Open in IMG/M
3300031831\|Ga0318564_10226080	Not Available	832	Open in IMG/M
3300031831\|Ga0318564_10333098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300031832\|Ga0318499_10261867	Not Available	670	Open in IMG/M
3300031833\|Ga0310917_10187709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1378	Open in IMG/M
3300031833\|Ga0310917_10518512	Not Available	810	Open in IMG/M
3300031860\|Ga0318495_10131118	Not Available	1129	Open in IMG/M
3300031879\|Ga0306919_10200130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1484	Open in IMG/M
3300031880\|Ga0318544_10126083	Not Available	974	Open in IMG/M
3300031880\|Ga0318544_10156767	Not Available	874	Open in IMG/M
3300031890\|Ga0306925_10821751	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	962	Open in IMG/M
3300031896\|Ga0318551_10864308	Not Available	527	Open in IMG/M
3300031912\|Ga0306921_10232528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2159	Open in IMG/M
3300031912\|Ga0306921_11485015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300031945\|Ga0310913_10075943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	2235	Open in IMG/M
3300031959\|Ga0318530_10427718	Not Available	549	Open in IMG/M
3300032009\|Ga0318563_10483232	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300032039\|Ga0318559_10392325	Not Available	647	Open in IMG/M
3300032091\|Ga0318577_10184173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	997	Open in IMG/M
3300033289\|Ga0310914_10127147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2224	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.97%
Host-Associated	Host-Associated	4.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.35%
Plants	Host-Associated → Plants	4.03%
Aquatic	Environmental → Aquatic	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.03%
Sediment	Environmental → Aquatic → Sediment	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.23%
Loam	Environmental → Terrestrial → Soil → Loam	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03041750	2124908045	Soil	MWGADCKDDCRVAVVTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARTFQGVKKCVARELEHGSYASNIDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQTWTASQFKERF
AP72_2010_repI_A01DRAFT_10403561	3300000579	Forest Soil	PMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR*
AF_2010_repII_A1DRAFT_100430522	3300000597	Forest Soil	MWGADCKDDCRVAVVTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
AF_2010_repII_A1DRAFT_100852062	3300000597	Forest Soil	VTVLRISATAAAAIVASLLSPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
AF_2010_repII_A100DRAFT_10123532	3300000655	Forest Soil	MWGADCKDDCRVAVVTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALLVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
AF_2010_repII_A001DRAFT_100581641	3300000793	Forest Soil	MWGADCKDDCRVAVVTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRQLDHTVARAFQGVKKCVARELEYGSYPSNLDDALRAILARNCSRQYDAFFQACVATGEEAEVCLGFVQSWTA
AP72_2010_repI_A100DRAFT_10476431	3300000837	Forest Soil	ILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
JGI12630J15595_100315472	3300001545	Forest Soil	MAKMIVGSRFVTVLRISTTGAAAIVASLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEVCLGFVQSWTAAQFKERFYR*
JGI25615J43890_10357363	3300002910	Grasslands Soil	MAKMIVGSRFVTVLRISATGAAAIVATLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR*
Ga0066397_100089951	3300004281	Tropical Forest Soil	VVTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0066869_100462731	3300005165	Soil	MAKMIVGSRFVTVLRISATGAAAVVASLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR*
Ga0066388_1004530002	3300005332	Tropical Forest Soil	VTVLRISATAAAAIVASLLFPILSANSQQDWEQRLKQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVTAGEEAEVCLGFVQSWTAAQFRERFYR*
Ga0066388_1028929433	3300005332	Tropical Forest Soil	AFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCIARELEHGSYPSNVDDALRVILVRNCRRQYDAFFQACVTTGEEAEVCLGFVQSWTASQFKERFYR*
Ga0066388_1058728562	3300005332	Tropical Forest Soil	LFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0008090_100241371	3300005363	Tropical Rainforest Soil	VRLEFDRLDVGCRLQDDCRVAVVMVLRISSAAAAAFVASLLFPMLSANSQPNWQQRQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0070714_1013515821	3300005435	Agricultural Soil	VKRREFVSLLAASLLFPILSVNSQPNRQQRPKRVDHAVAKAFQDVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTASEFKERFYR*
Ga0070708_1014417111	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLRISATAAAGIAASLLFPILSANSQPNWQQRLEQVDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVGNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0070706_1014595441	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAKMIVGSRFVTVLRISATGAAAIVASLLFPILSANSQPNWQHRPGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEVCLGFVQSGTAAQFKERFYR*
Ga0066905_1020839132	3300005713	Tropical Forest Soil	VVVTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR*
Ga0066903_1025183681	3300005764	Tropical Forest Soil	PMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGRYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVHSWTASQFKERFYR*
Ga0066903_1033490342	3300005764	Tropical Forest Soil	VTVLRISATAAAAIVASLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0075018_100017562	3300006172	Watersheds	MAKMIVGSRFVTVLRISATGAAAIVASLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR*
Ga0070716_1010513471	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKRREFVSLLAASLLFPILSANSQPNRQQRLKRVDHAVAKAFQDVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTASEFKERFYR*
Ga0070712_1002510271	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKRREFVSVLAASLLFPILSAHSQPNRQQRLKRVDHAVAKAFQDVKNCVAQELEYGSYSSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFVQSWTASQFKERFYR*
Ga0075428_1023366722	3300006844	Populus Rhizosphere	VKRREFVSLLAASLLFPILSANSQPNRQQRLKRVDHAVAKAFQDVKNCVAHELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTA
Ga0075421_1016209471	3300006845	Populus Rhizosphere	VKRREFVSLLAASLLFPILSANSQPNRQQRLKRVDHAVAKAFQDVKNCVAHELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTAFEFKERFYR*
Ga0075433_110126462	3300006852	Populus Rhizosphere	DRVKRREFVSLLAASLLFPILSANSQPNRQQRLKRVDHAVAKAFQDVKNCVAHELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTASEFKERFYR*
Ga0075425_1016890621	3300006854	Populus Rhizosphere	VKRREFVSLLAASLLFPILSANSQPNRQQRLKRVDHAVAKAFQDVKNCVAHELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTASEFKERFYR*
Ga0114129_135079021	3300009147	Populus Rhizosphere	DDRWVAVVTVLRISATAAAALLFPILSANSQPNWQHRLEQLDHAVARAFQDVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEICLGFVQSWTAAQFKERFYR
Ga0126374_111281901	3300009792	Tropical Forest Soil	VTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0126374_111427332	3300009792	Tropical Forest Soil	VTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFV
Ga0126380_100422562	3300010043	Tropical Forest Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVSSLLFPMLSTNSQPNWQQRLEKLDHAVARTFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR*
Ga0126382_109217102	3300010047	Tropical Forest Soil	MWGADCKYDCRVAVVTVLRISSAAAAALVSSLLFSMLSTNSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0126370_102897593	3300010358	Tropical Forest Soil	AAIAASLLFPILSANSQPKHRLEQLNHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVTAGEEAEVCLGFVQSWTAAQFRERFYR*
Ga0126370_124666622	3300010358	Tropical Forest Soil	AAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0126376_107793112	3300010359	Tropical Forest Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVSSLLFPMLSTNSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFV
Ga0126372_103526183	3300010360	Tropical Forest Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVSSLLFPMLSTNSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR*
Ga0126378_113504131	3300010361	Tropical Forest Soil	VTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEV
Ga0126377_111473001	3300010362	Tropical Forest Soil	MTVLRISSAAAAAFVSSLLFPMLSTNSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR*
Ga0126379_130249951	3300010366	Tropical Forest Soil	MVLRISSAAAAAFVASLLFPMLSANSQPNWQQRQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDTFFQACVATGKEAEVCLAFVQSWTASQFKERFYR*
Ga0126381_1046302601	3300010376	Tropical Forest Soil	AFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0126383_103080483	3300010398	Tropical Forest Soil	VTLLRISATAAAALLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEHGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQTWTASQFKERFYR*
Ga0126383_108854591	3300010398	Tropical Forest Soil	VVVTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKQLDHAVARAFQGVKNCVAQELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEDAEVCLGFVQSWTAAQFKERFYR*
Ga0124850_10414931	3300010863	Tropical Forest Soil	MWGADCKDDCRVAVMTVLRIFSAAAAAFVASFLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0137364_107269792	3300012198	Vadose Zone Soil	VTVLRISATAAAALLFSILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVASGEEAEVCLGFVQTWTASQFKERFYR*
Ga0137363_101432123	3300012202	Vadose Zone Soil	VTVVRISATAAAGIAASLLFPILSANSQPNWQQRLEQVDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVGNCRRQYDAFFQACVAAGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0137363_103924741	3300012202	Vadose Zone Soil	VTVLRISAIAAAAIVASLLFPILSANSQQNWEQRLNQLGHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACAATGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0137379_102361333	3300012209	Vadose Zone Soil	VTVLRISATAAAALLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVASGEEAEVCLGFVQTWTASQFKERFYR*
Ga0137378_102701162	3300012210	Vadose Zone Soil	VTVLRISATAAAALLFPILSANSQPNWQQRLKRVDHAVARAFQGVKNCVAQELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVASGEEAEVCLGFVQTWTASQFKERFYR*
Ga0137360_115105421	3300012361	Vadose Zone Soil	IVGSRFVTVLRISATGAAAIVATLLFPILSANSQQNWEQRLNQLGHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVGNCRRQYDAFFQACVAAGEEAEVCLGFVQSWTAAQFKERFYR*
Ga0137361_101186921	3300012362	Vadose Zone Soil	ISATAAAALLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVASGEEAEVCLGFVQTWTASQFKERFYR*
Ga0137358_103819742	3300012582	Vadose Zone Soil	MADWSIRASARSLDRRCQNDPMAKMIVGSRFVTVLRISATGAAAIVATLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILGRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR*
Ga0137359_100483211	3300012923	Vadose Zone Soil	LLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR*
Ga0137407_112857761	3300012930	Vadose Zone Soil	VTVLRISATAAAALLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAHELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVASGEEAEVCLGFVQTWTASQFKERFYR*
Ga0126369_114620582	3300012971	Tropical Forest Soil	MWGADCKDDCRVAVMTVLRISSAAAGAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR*
Ga0164305_115568011	3300012989	Soil	MAKMIVGSRFVTVLRISATGAAAIVATLLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFIQSWTASEFKERFYR*
Ga0182035_118190831	3300016341	Soil	ISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0182034_112722041	3300016371	Soil	NLTGSMWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0182034_114216881	3300016371	Soil	KDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0182040_114267693	3300016387	Soil	LFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0182037_115360141	3300016404	Soil	MLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0182038_119378321	3300016445	Soil	LLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR
Ga0184605_103835931	3300018027	Groundwater Sediment	MMFSEIKTARVIYAAIAATILLSTSPAVPQTNSQKRLKQLDRAVTKTFQGVKHCVVRELEYGSYPANIDDALRMILVRNCRRQYDAFFQACVATGDEAEKCLAIVQSWTAAEFKERISR
Ga0066662_104493501	3300018468	Grasslands Soil	VTVVRISATAAAGIAASLLFPILSANSQPNWQQRLEQVDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVGNCRRQYDAFFQACVAAGEEAEVCLGFVQSWTAAQFKERFYR
Ga0179596_101811262	3300021086	Vadose Zone Soil	MAKMIVGSRFVTVLRISATGAAAIVATLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR
Ga0210408_107033731	3300021178	Soil	VKRREFVSLLAASLLFPILSANSQPNWQQRLKRVDHAVAKAFRDVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFVQSWTASQFKERFYR
Ga0210384_102191432	3300021432	Soil	VKRREFVSLLAASLLFPILSANSQPNWQQRLKRVDHAVAKAFQGVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFVQSWTASQFKERFYR
Ga0210410_114437681	3300021479	Soil	PILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEVCLGFVQSWTAAQFKERFYR
Ga0207692_100747434	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKRREFVSLLAASLLFPILSVNSQPNRQQRPKRVDHAVAKAFQDVKNCVAHELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAE
Ga0207684_103344621	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTVLRISATAAAGIAASLLFPILSANSQPNWQQRLEQVDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVGNCRRQYDAFFQACVAAGEEAEVCLGFVQSWTAAQFKERFYR
Ga0207665_101957762	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRREFVSLLAASLLFPILSVNSQPNRQQRPKRVDHAVAKAFQDVKNCVAQELEYGSYPSHLDDALRVILVQNCRRQYDAFFQTCVASGQEAEVCLGFVQSWTASQFKERFYR
Ga0257179_10421541	3300026371	Soil	MIVGSRFVTVLRISATGAAAIVATLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR
Ga0257169_10229811	3300026469	Soil	SANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR
Ga0209524_10508122	3300027521	Forest Soil	MAKMIVGSRFVTVLRISTTGAAAIVASLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEVCLGFVQSWTAAQFKERFYR
Ga0209466_10852632	3300027646	Tropical Forest Soil	MWGADCKDDCRVAVVTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQ
Ga0209799_10343982	3300027654	Tropical Forest Soil	MTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0209701_103911951	3300027862	Vadose Zone Soil	ISATGAAAIVATLLFPILSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELESGSYPSNVDDALRVILVRNCGRQYDAFFQACVATGKESEACLGFVQSWTAAEFKERFYR
Ga0209283_103799712	3300027875	Vadose Zone Soil	MAKMIVGSRFVTVLRISAAGAAAIVASLLFPIPSANSQPNWQHRLGHLDHAVARAFKGVKNCVARELEYGSYASNVDDALRVILVRNCRRQYDAFFQACVATGKESEVCLGFVQSWTAAQFKERFY
Ga0307278_101459402	3300028878	Soil	MFSEIKTARVIYAAIAATILLSTSPAVPQTNSQKRLKQLDHAVTKTFQGVKNCVVRELEHGSYPANIDDALRMILVRNCRRQYDAFFQACVATGDEAEKCLAIVQSWTAAQFKERISR
Ga0318516_100852992	3300031543	Soil	VTVLRISATAAAAIVASLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318516_100989931	3300031543	Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318541_100210901	3300031545	Soil	MTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318538_101128931	3300031546	Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARDFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318538_104749701	3300031546	Soil	VTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318573_100871732	3300031564	Soil	VTVLRISATAAAAIVASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318515_100146333	3300031572	Soil	VTVLRISATAAAAIVASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDTFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR
Ga0318515_107383371	3300031572	Soil	NRVAVMTVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318542_100420773	3300031668	Soil	VTVLRISATAAAAIVASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318542_101185633	3300031668	Soil	ANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318542_106582453	3300031668	Soil	NSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318561_101214451	3300031679	Soil	MWGADCKDDYRVAVITVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318572_101227783	3300031681	Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318560_102913702	3300031682	Soil	VTVLRISAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0306917_107425771	3300031719	Soil	MTVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0306917_113088671	3300031719	Soil	TVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318492_103798921	3300031748	Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACVATG
Ga0318494_100683513	3300031751	Soil	MWGADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR
Ga0318494_107915261	3300031751	Soil	VTVLRISATAAAAIVASANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318521_104295862	3300031770	Soil	MWGADCKDDYRVAVMTVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318566_101000061	3300031779	Soil	SATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318566_104691381	3300031779	Soil	CRVAVVTVLRISATAAAAIVASLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318552_106440361	3300031782	Soil	WVAVVTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKNHSVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318529_102727433	3300031792	Soil	SLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDTFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR
Ga0318548_100379481	3300031793	Soil	AAAAIVASANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVAAGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318576_100958231	3300031796	Soil	VTLLRISATAAAAIVASLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318564_102260801	3300031831	Soil	MTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTVSQFKERFYR
Ga0318564_103330981	3300031831	Soil	ATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318499_102618671	3300031832	Soil	MLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0310917_101877093	3300031833	Soil	MTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0310917_105185121	3300031833	Soil	NSQPNWQQRLEQLDHTVARAFQGVKKCVARELEHGSYHSNVDDALRVILARNCRRQYDAFFQACMATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318495_101311182	3300031860	Soil	AAAIVASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0306919_102001301	3300031879	Soil	MLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318544_101260831	3300031880	Soil	LLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCKRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318544_101567671	3300031880	Soil	VASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDTFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR
Ga0306925_108217511	3300031890	Soil	VTVLRISATAAAAIVASLLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318551_108643081	3300031896	Soil	AVMTVLRISSAAAAAFVASLLFPMLSANFQPNWQLRLEQLDHTVARTFQGVKKCVARELEHGSYPSNIDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0306921_102325281	3300031912	Soil	ANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDTFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR
Ga0306921_114850151	3300031912	Soil	SLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0310913_100759432	3300031945	Soil	VTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318530_104277181	3300031959	Soil	LLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318563_104832322	3300032009	Soil	MIVGSRIVTVLRISATAAAAIVASLLFPILSANSQQNWEQRLKNHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0318559_103923253	3300032039	Soil	ADCKDDCRVAVMTVLRISSAAAAAFVASLLFPMLSANSQPNWQQRLEQLDHTVARAFQGVKKCVARELEYGSYPSNVDDALRVILARNCRRQYDAFFQACVATGEEAEVCLGFVQSWTASQFKERFYR
Ga0318577_101841731	3300032091	Soil	LFPILSANSQQNWEQRLKNHAVARAFQGVKSCVARELEYGSYPSNVDDALRVILVRNCRRQYDAFFQACVATGEEAEVCLGFVQSWTAAQFKERFYR
Ga0310914_101271477	3300033289	Soil	AIVASFLLPILSANSQPNWQQRLEQLDHAVARAFQGVKNCVARELEYGSYPSNVDDALRVILVRNCRRQYDTFFQACVATGEEAEVCLGFVQSWTAGQFKERFYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069303

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences