Basic Information | |
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Family ID | F069443 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 124 |
Average Sequence Length | 42 residues |
Representative Sequence | RFHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR |
Number of Associated Samples | 107 |
Number of Associated Scaffolds | 124 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.81 % |
% of genes near scaffold ends (potentially truncated) | 98.39 % |
% of genes from short scaffolds (< 2000 bps) | 96.77 % |
Associated GOLD sequencing projects | 100 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.47 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (46.774 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (25.806 % of family members) |
Environment Ontology (ENVO) | Unclassified (57.258 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (83.871 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 49.25% β-sheet: 0.00% Coil/Unstructured: 50.75% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.47 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Marine Surface Seawater Marine Aqueous Sackhole Brine Freshwater To Marine Saline Gradient Marine Salt Marsh Marine Estuarine Water Pelagic Marine Pelagic Marine Seawater Saline Lake Saline Water Pond Water Sediment Macroalgal Surface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
BBAY93_101324711 | 3300000973 | Macroalgal Surface | FQSVCMGFGYREAEIIPVKMEIEEWCREHLEHLESKFR* |
JGI20152J14361_101132511 | 3300001344 | Pelagic Marine | PDKFADRFQHICFGFGYXEAEIIPAKNEIREWCQEHLSHLESKFR* |
JGI20151J14362_101683393 | 3300001346 | Pelagic Marine | RFHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR* |
JGI20160J14292_101532783 | 3300001349 | Pelagic Marine | HSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR* |
JGI24006J15134_100604851 | 3300001450 | Marine | DRFQHICFGFGYREAEIIPMKSEIKEWCQEHLDHLESKFR* |
JGI24003J15210_101838862 | 3300001460 | Marine | MSPEKFADRFQHICFGFGYRESEIIPQKHEIKEWCQEHLDKLESRFG* |
GOS2226_10272081 | 3300001943 | Marine | LMGPKKFGERFHDICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR* |
Ga0066835_102220903 | 3300005606 | Marine | VCLGFGYREAEIIPAKLEIEEWCREHLLHLESKFR* |
Ga0075108_101064331 | 3300005913 | Saline Lake | RFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR* |
Ga0075117_11427504 | 3300005914 | Saline Lake | ADRFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR* |
Ga0075117_11812161 | 3300005914 | Saline Lake | PDKFADRFQHICFGFGYREAEIIPQKLEIKEWCQEYLDKLESRFR* |
Ga0075462_100524636 | 3300006027 | Aqueous | CLGFGYREAEIIPAKMEIEEWCREHLDHLESKFR* |
Ga0075461_101920593 | 3300006637 | Aqueous | VCMGFGYREAEIIPAKMEIFDWCRDYLQGLENKFR* |
Ga0070754_104800083 | 3300006810 | Aqueous | FHNVCLGFGYREAEIIPAKMEIEEWCREHLTHLESKFR* |
Ga0075476_102597533 | 3300006867 | Aqueous | FAERFHNVCLGFGYREAEIIPAKMEIEEWCQEHLSHLESKFR* |
Ga0075479_102044405 | 3300006870 | Aqueous | KSFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLDHLESKFR* |
Ga0070746_103941801 | 3300006919 | Aqueous | ALMGPKKFGERFHDICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR* |
Ga0075460_103243211 | 3300007234 | Aqueous | RFHDVCLGYGYREAEIIPAKEDIEDWCRDHLLHLENKFR* |
Ga0099850_12895061 | 3300007960 | Aqueous | QTFANRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR* |
Ga0118687_104064141 | 3300009124 | Sediment | PQTFAERFQSVCMGFGYREAEIIPAKLEIFDWCREYLQKMETKVR* |
Ga0114995_100684561 | 3300009172 | Marine | RFQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR* |
Ga0115551_12715851 | 3300009193 | Pelagic Marine | GPDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLDHLESKFR* |
Ga0115548_12440423 | 3300009423 | Pelagic Marine | GPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR* |
Ga0115545_10389776 | 3300009433 | Pelagic Marine | GPDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLSHLESKFR* |
Ga0115562_11190644 | 3300009434 | Pelagic Marine | FHNICLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR* |
Ga0115559_13353061 | 3300009438 | Pelagic Marine | LMGPKKFGERFHSICLGFGYRESEIIPLKMEIEEWCHEHLSHLESKFR* |
Ga0115559_13381931 | 3300009438 | Pelagic Marine | MGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR* |
Ga0115558_12933561 | 3300009449 | Pelagic Marine | SICLGFGYRESEIIPLKMEIEEWCQEHLSHLESKFR* |
Ga0115554_10847801 | 3300009472 | Pelagic Marine | CFGFGYREAEIIPAKNEIRELCQEHLSHLESKFR* |
Ga0115554_11334834 | 3300009472 | Pelagic Marine | KKFGERFHSICLGFGYRESEIIPLKMEIEEWCQEHLSHLESKFR* |
Ga0115571_11221771 | 3300009495 | Pelagic Marine | CFGFGYREAEIIPAKNEIREWCQEHLDHLESKFR* |
Ga0115003_107000733 | 3300009512 | Marine | FQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR* |
Ga0115104_109640584 | 3300009677 | Marine | QHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR* |
Ga0115012_112391571 | 3300009790 | Marine | KTFAKRFHDVCLGFGFREAEIIPAKMEIEEWCREHLLTLENKFR* |
Ga0098059_13072601 | 3300010153 | Marine | PEKFADRFQAICFGFGYREAEIIPTKNEIKEWCQEYLSHLESKFR* |
Ga0129342_13531381 | 3300010299 | Freshwater To Marine Saline Gradient | TFAERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLENKFR* |
Ga0136656_11353814 | 3300010318 | Freshwater To Marine Saline Gradient | VCLGFGYREAEIIPAKMEIEEWCQDHLSHLESKFR* |
Ga0129324_100652511 | 3300010368 | Freshwater To Marine Saline Gradient | SVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR* |
Ga0129324_101533951 | 3300010368 | Freshwater To Marine Saline Gradient | RFADRFQSVCMGFGYREAEIIPAKMEIEEWCRDHLSHLESKFR* |
Ga0163111_107668921 | 3300012954 | Surface Seawater | MGPDKFADRFQAICLGFGYREAEIIPAKSEIKEWCQEHLNHLESKFR* |
Ga0181369_10622601 | 3300017708 | Marine | EDALMGPDKFGERFHSICLGFGYREAEIIPLKLEIIEWCREHLLHLESKFR |
Ga0181369_10774941 | 3300017708 | Marine | MGPKKFGERFHSICLGFGYRESEIIPAKMEMEEWCREHLSHLESKFR |
Ga0181404_11406441 | 3300017717 | Seawater | LMGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLSHLESKFR |
Ga0181390_11267383 | 3300017719 | Seawater | NHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR |
Ga0181398_10378181 | 3300017725 | Seawater | RFQHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR |
Ga0181389_10215297 | 3300017746 | Seawater | GPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR |
Ga0181389_12085442 | 3300017746 | Seawater | NVCLGFGYREAEIIPTKIEIEEWCREHLLHLENKFR |
Ga0181393_11312563 | 3300017748 | Seawater | RERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR |
Ga0181420_10350161 | 3300017757 | Seawater | FGERFHNICLGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR |
Ga0181385_10862265 | 3300017764 | Seawater | ERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR |
Ga0181413_10447005 | 3300017765 | Seawater | LMGPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR |
Ga0181425_11308151 | 3300017771 | Seawater | MGPDKFADRFQHICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR |
Ga0181424_103300173 | 3300017786 | Seawater | MGPKMFGERFHNICLGFGYREAEIIPMKMEIEEWCQEHLAHLESKFR |
Ga0181565_107258314 | 3300017818 | Salt Marsh | HSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0181552_102960321 | 3300017824 | Salt Marsh | MTPQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR |
Ga0181584_102244681 | 3300017949 | Salt Marsh | AERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0181607_105224383 | 3300017950 | Salt Marsh | DALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLENLESKFR |
Ga0181577_105697371 | 3300017951 | Salt Marsh | KKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR |
Ga0181583_108487961 | 3300017952 | Salt Marsh | MGPDKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR |
Ga0181590_103840641 | 3300017967 | Salt Marsh | PQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQSLENKFR |
Ga0181569_108617671 | 3300017986 | Salt Marsh | TFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLLTLENKFR |
Ga0181600_105058221 | 3300018036 | Salt Marsh | ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLSHLESKFR |
Ga0181606_100680121 | 3300018048 | Salt Marsh | SPKTFAERFHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0181572_103213414 | 3300018049 | Salt Marsh | ICLGFGYREAEIIPTKMEIEEWCREHLLHLESKFR |
Ga0181572_103682324 | 3300018049 | Salt Marsh | KTFAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLLTLENKFR |
Ga0181561_103255571 | 3300018410 | Salt Marsh | PKKFGDRFHNICLGFGYREAEIIPAKIEIEEWCREHLSHLESKFR |
Ga0181561_103453661 | 3300018410 | Salt Marsh | RFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR |
Ga0181560_102952201 | 3300018413 | Salt Marsh | ALMTPQTFADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR |
Ga0181559_102547164 | 3300018415 | Salt Marsh | MGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR |
Ga0181558_103535734 | 3300018417 | Salt Marsh | RFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR |
Ga0181567_106649831 | 3300018418 | Salt Marsh | FAERFHSVCLGFGFREAEIIPAKMEIEEWCREHLSHLENKFR |
Ga0181591_107897481 | 3300018424 | Salt Marsh | HSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0181564_105038121 | 3300018876 | Salt Marsh | KFGERFHNICLGFGYREAEIIPLKLEIIDWCREHLLHLESKFR |
Ga0194029_10443811 | 3300019751 | Freshwater | MTPQTFADRFQSVCMGFGYREAEIIPAKMELFDWCRDYLQNLENKFR |
Ga0181595_102245594 | 3300020053 | Salt Marsh | GERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR |
Ga0181605_104301533 | 3300020188 | Salt Marsh | KFGERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR |
Ga0181597_104094583 | 3300020194 | Salt Marsh | KKFGERFHNICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR |
Ga0211652_101640414 | 3300020379 | Marine | PDKFADRFQYICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR |
Ga0211636_102511754 | 3300020400 | Marine | FAERFQNVCMGFGYREAEIIPMKMEIEDWCREHLLHLESKFR |
Ga0211521_103430531 | 3300020428 | Marine | PKTFAERFQNVCLGFGYREAEIIPAKSEIEEWCREHLLHLESKFR |
Ga0211576_106253031 | 3300020438 | Marine | ICFGFGYREAEIIPAKNEIKEWCQEHLSHLESKFR |
Ga0181557_12009663 | 3300020601 | Salt Marsh | ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR |
Ga0222718_101682221 | 3300021958 | Estuarine Water | ADRFQHVCFGFGYREAEIIPQKHEIKEWCQEHLDKLEGRFR |
Ga0222716_103755175 | 3300021959 | Estuarine Water | QSVCMGFGYREAEIIPAKMEIEEWCREHLLHLESKFR |
Ga0222716_103824584 | 3300021959 | Estuarine Water | KKFGERFHNICLGFGYRESEIIPAKMEIEEWCQEHLSHLESKFR |
Ga0222715_103486841 | 3300021960 | Estuarine Water | VCLGYGYREPEIIPAKEEIEDWCREHLLHLESKFR |
Ga0222719_105508503 | 3300021964 | Estuarine Water | KKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLSHLESKFR |
Ga0196901_11763071 | 3300022200 | Aqueous | DRFHSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0255765_12164321 | 3300022921 | Salt Marsh | MGPKKFGERFHNICLGFGYRESEIIPAKMEIEQWCQEHLSHLESKFR |
Ga0255783_103232723 | 3300022923 | Salt Marsh | LMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR |
Ga0255752_102808491 | 3300022929 | Salt Marsh | FHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR |
Ga0255770_101156415 | 3300022937 | Salt Marsh | DALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR |
Ga0255770_101513125 | 3300022937 | Salt Marsh | FHSVCMGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0255776_101792141 | 3300023173 | Salt Marsh | ALMGPKKFGERFHNICLGFGYRESEIIPAKMEIEEWCREHLEHLESKFR |
Ga0255776_103000484 | 3300023173 | Salt Marsh | LMGPKKFGERFHNICLGFGYRESEIIPAKMEIEDWCREHLSHLESKFR |
Ga0222676_10299604 | 3300023240 | Saline Water | LMSPKKFAERFHSVCLGFGYREAEIIPMKFEIEQWCQEHLDHLESRFR |
Ga0209535_11055834 | 3300025120 | Marine | RFQHICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR |
Ga0209535_11277351 | 3300025120 | Marine | RFQHICFGFGYREAEIIPMKSEIKEWCQEHLDHLESKFR |
Ga0208919_11557761 | 3300025128 | Marine | ALMGPKKFGERFHNICLGFGYREAEIIPAKMEMEEWCQGHLSHLESKFR |
Ga0209557_11211491 | 3300025483 | Marine | QHICFGFGYREAEIIPQKHEIREWCQEHLDKLESRFR |
Ga0208903_10914204 | 3300025502 | Saline Lake | ADRFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR |
Ga0209195_11161881 | 3300025590 | Pelagic Marine | KKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR |
Ga0208768_10724665 | 3300025601 | Saline Lake | RFQHICFGFGYREAEIIPQKLEIKEWCQEHLDKLESRFR |
Ga0208149_10575515 | 3300025610 | Aqueous | AERFHSVCLGFGYREAEIIPAKMEIEDWCREHLLHLESKFR |
Ga0208149_11394801 | 3300025610 | Aqueous | SVCMGFGYREAEIIPAKMELFDWCRDYLQNLENKFR |
Ga0209406_11614191 | 3300025694 | Pelagic Marine | MGPKKFGERFHSICLGFGYRESEIIPAKMEIEEWCQEHLTHLESKFR |
Ga0208425_11260681 | 3300025803 | Aqueous | SVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR |
Ga0208542_12081851 | 3300025818 | Aqueous | RFHDVCLGYGYREAEIIPAKEDIEDWCRDHLLHLENKFR |
Ga0209631_105239883 | 3300025890 | Pelagic Marine | PKKFGERFHSICLGFGYREAEIIPLKMEIEQWCEEHLGKLESKFI |
Ga0209630_101856261 | 3300025892 | Pelagic Marine | FAERFHNVCLGFGYREAEIIPAKMEIEEWCREHLEHLESKFR |
Ga0209425_101054485 | 3300025897 | Pelagic Marine | PDKFADRFQHICFGFGYREAEIIPAKNEIREWCQEHLSHLESKFR |
Ga0209929_11135454 | 3300026187 | Pond Water | QSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLENKFR |
Ga0209929_11687041 | 3300026187 | Pond Water | ADRFQSVCMGFGYREAEIIPAKMEIFDWCRDYLQNLETKFR |
Ga0233450_102760941 | 3300028115 | Salt Marsh | FGERFHNICLGFGYRESEIIPAKMEIEDWCREHLEHLESKFR |
Ga0257114_12615811 | 3300028196 | Marine | ALMGPDKFADRFQHICFGFGYREAEIIPMKLEIKEWCQEHLDHLESKFR |
Ga0307488_107439141 | 3300031519 | Sackhole Brine | MSADKFADRFQHICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR |
Ga0307488_108095602 | 3300031519 | Sackhole Brine | MSPDKFADRFQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR |
Ga0302137_12768544 | 3300031588 | Marine | MSPKKFAERFHSVCLGFGYREAEIIPMKFEIEQWCQEHLDKLESRFR |
Ga0302131_12872944 | 3300031594 | Marine | HICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR |
Ga0302134_103786523 | 3300031596 | Marine | QHICFGFGYREAEIIPQKHEIKAWCQEHLDKLESRFR |
Ga0302121_100970565 | 3300031626 | Marine | QHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR |
Ga0302121_101116954 | 3300031626 | Marine | FQHICFGFGYREAEIIPQKHEIKEWCQEHLDKLESRFR |
Ga0302121_101200611 | 3300031626 | Marine | QHICFGFGYREAEIIPQKHEIKEWCQEHLDKLEGRFR |
Ga0302118_105496712 | 3300031627 | Marine | ICFGFGYREAEIIPQKHEIKEWCQEYLDKLESRFR |
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