Metagenome / Metatranscriptome Family F069459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069459
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	96 residues
Representative Sequence	MIVIHATNAWNPTGRNLLPVPGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVEGHVEPASLRQLAIDRFGLYPHLVDQDPAPGLPRIAEVRS
Number of Associated Samples	92
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.28 %
% of genes near scaffold ends (potentially truncated)	28.23 %
% of genes from short scaffolds (< 2000 bps)	87.90 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.548 % of family members)
Environment Ontology (ENVO)	Unclassified (26.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.11% β-sheet: 25.41% Coil/Unstructured: 61.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.16: RNB domain-like	d2vnud4	2vnu	0.61459
b.40.4.16: RNB domain-like	d2id0a4	2id0	0.57315
b.40.4.16: RNB domain-like	d2r7da2	2r7d	0.54652
e.55.1.1: Rap/Ran-GAP	d1srqa_	1srq	0.52685
b.67.2.3: Glycosyl hydrolases family 32 N-terminal domain	d1utwa1	1utw	0.52441

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF11258	DUF3048	32.26
PF00480	ROK	20.16
PF00300	His_Phos_1	3.23
PF00884	Sulfatase	1.61
PF11171	DUF2958	0.81
PF01381	HTH_3	0.81
PF00011	HSP20	0.81
PF00296	Bac_luciferase	0.81
PF01547	SBP_bac_1	0.81
PF00528	BPD_transp_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	40.32
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.65 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	79.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	72.58 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	1.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.61 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.61 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.61 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.61 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	72.58 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1.61 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_105633826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1200	Open in IMG/M
3300001431\|F14TB_102530104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300005174\|Ga0066680_10584144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	701	Open in IMG/M
3300005177\|Ga0066690_10305009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1076	Open in IMG/M
3300005179\|Ga0066684_10527626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	792	Open in IMG/M
3300005181\|Ga0066678_10050521	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300005181\|Ga0066678_10475396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	831	Open in IMG/M
3300005184\|Ga0066671_10390617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	889	Open in IMG/M
3300005332\|Ga0066388_103532829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300005340\|Ga0070689_101066312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300005354\|Ga0070675_101864415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300005435\|Ga0070714_102152565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300005436\|Ga0070713_100488228	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300005450\|Ga0066682_10443063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300005467\|Ga0070706_100452527	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005471\|Ga0070698_100132935	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300005471\|Ga0070698_100756771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	915	Open in IMG/M
3300005532\|Ga0070739_10246598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	884	Open in IMG/M
3300005536\|Ga0070697_101930820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300005537\|Ga0070730_10010167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	7738	Open in IMG/M
3300005537\|Ga0070730_10015084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6176	Open in IMG/M
3300005537\|Ga0070730_10069453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2490	Open in IMG/M
3300005537\|Ga0070730_10214761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1279	Open in IMG/M
3300005542\|Ga0070732_10060943	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300005542\|Ga0070732_10244097	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005556\|Ga0066707_10239664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1181	Open in IMG/M
3300005561\|Ga0066699_10676674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300005575\|Ga0066702_10642336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300005598\|Ga0066706_10424587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1059	Open in IMG/M
3300005614\|Ga0068856_100650422	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005617\|Ga0068859_102719250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005618\|Ga0068864_101779375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	621	Open in IMG/M
3300005764\|Ga0066903_100257194	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300005764\|Ga0066903_100707696	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300005764\|Ga0066903_100989361	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300005764\|Ga0066903_102624099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	977	Open in IMG/M
3300005994\|Ga0066789_10169241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	925	Open in IMG/M
3300006032\|Ga0066696_10681016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300006903\|Ga0075426_10997141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300007790\|Ga0105679_10223353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1005	Open in IMG/M
3300009012\|Ga0066710_100650079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1604	Open in IMG/M
3300009012\|Ga0066710_100993381	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300009012\|Ga0066710_101381650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
3300009012\|Ga0066710_101437471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1067	Open in IMG/M
3300009012\|Ga0066710_103018549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300009038\|Ga0099829_10957086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	710	Open in IMG/M
3300009088\|Ga0099830_11866476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300009089\|Ga0099828_10968495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300009090\|Ga0099827_10885671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	773	Open in IMG/M
3300009094\|Ga0111539_11968504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300009137\|Ga0066709_101315884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1058	Open in IMG/M
3300009137\|Ga0066709_102636656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300009156\|Ga0111538_13552156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300010038\|Ga0126315_10705982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	658	Open in IMG/M
3300010047\|Ga0126382_12201692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300010048\|Ga0126373_12162581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300010152\|Ga0126318_10035587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300010358\|Ga0126370_10974998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300010358\|Ga0126370_11988734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300010359\|Ga0126376_10305283	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300010361\|Ga0126378_10211046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2022	Open in IMG/M
3300010366\|Ga0126379_10980755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	949	Open in IMG/M
3300010371\|Ga0134125_10819074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1024	Open in IMG/M
3300010376\|Ga0126381_103058233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	663	Open in IMG/M
3300010376\|Ga0126381_103197140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300010398\|Ga0126383_10618435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1156	Open in IMG/M
3300010398\|Ga0126383_11544176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300011270\|Ga0137391_10158612	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300011270\|Ga0137391_10229835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1610	Open in IMG/M
3300011270\|Ga0137391_10525734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300011271\|Ga0137393_10406121	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300012096\|Ga0137389_10638277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	915	Open in IMG/M
3300012096\|Ga0137389_10897011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300012096\|Ga0137389_10919174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300012200\|Ga0137382_11301338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012204\|Ga0137374_10011320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10443	Open in IMG/M
3300012206\|Ga0137380_11647091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300012212\|Ga0150985_104211352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300012212\|Ga0150985_116168563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300012355\|Ga0137369_10093335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2489	Open in IMG/M
3300012358\|Ga0137368_10077714	All Organisms → cellular organisms → Bacteria	2660	Open in IMG/M
3300012359\|Ga0137385_11367019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300012360\|Ga0137375_10853829	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012363\|Ga0137390_10252099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1751	Open in IMG/M
3300012363\|Ga0137390_10711338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	966	Open in IMG/M
3300012469\|Ga0150984_103738038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	951	Open in IMG/M
3300012532\|Ga0137373_10653304	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012532\|Ga0137373_10874855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012971\|Ga0126369_12804430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300012971\|Ga0126369_13471597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300012977\|Ga0134087_10574837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300013308\|Ga0157375_11898228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300013503\|Ga0120127_10153046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300013768\|Ga0120155_1120148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300014829\|Ga0120104_1083940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300015373\|Ga0132257_103549798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300018433\|Ga0066667_11080699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	694	Open in IMG/M
3300018468\|Ga0066662_11210013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300018468\|Ga0066662_12996404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300018482\|Ga0066669_12335791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300020070\|Ga0206356_11493401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300021362\|Ga0213882_10478952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300021362\|Ga0213882_10531941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300021384\|Ga0213876_10050919	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300021384\|Ga0213876_10116889	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300021388\|Ga0213875_10033544	All Organisms → cellular organisms → Bacteria	2425	Open in IMG/M
3300021388\|Ga0213875_10217665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	900	Open in IMG/M
3300024275\|Ga0247674_1046403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300025910\|Ga0207684_10354041	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300025922\|Ga0207646_10179612	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300025930\|Ga0207701_11630498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300026078\|Ga0207702_11025378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	819	Open in IMG/M
3300027748\|Ga0209689_1270545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300027773\|Ga0209810_1197504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	802	Open in IMG/M
3300027842\|Ga0209580_10266223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300027842\|Ga0209580_10499647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	605	Open in IMG/M
3300027857\|Ga0209166_10083236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1805	Open in IMG/M
3300027857\|Ga0209166_10096473	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300027875\|Ga0209283_10803205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300028380\|Ga0268265_12411020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300031520\|Ga0272428_1009296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13288	Open in IMG/M
3300032205\|Ga0307472_102443551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300034384\|Ga0372946_0131525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1188	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.48%
Host-Associated	Host-Associated	14.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.68%
Plants	Host-Associated → Plants	14.52%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.84%
Roots	Host-Associated → Plants → Roots	3.23%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.55%
Loam	Environmental → Terrestrial → Soil → Loam	12.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.81%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.03%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.81%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1056338262	3300000956	Soil	VIHATNAWNPTGHNLLPVPGTRLFDVHVEALSGPRTYVFLGSQQHLVFVADLEGHVAPEQLREQVIEVAGLYPHLVDLESPYATAHRRDH*
F14TB_1025301041	3300001431	Soil	VIHATNAWNPTGQNLLAVPGTRLFYVQVTALSGPRTYVFLGTQQHLTFVADFXXXXXXXXXXXXXLREFGLYPHLVDAT*
Ga0066680_105841441	3300005174	Soil	VTSPPAPIHATNAWNPTGRNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEGHVDPASLRSVLIERFGLYPHLIDLDPAPGLPRLFEDQPSPG*
Ga0066690_103050091	3300005177	Soil	MTSTPAPIHATNAWNPTGHNLLPVAGTRLFYAHADALNGPRTYVLLGSQQHLTFVADLEGHVEPGSLRSLLIDRFGLYPHLIDLDPAPGLPRVVNDQREQA*
Ga0066684_105276261	3300005179	Soil	MPARVNPAQTPIHATNAWNPTGRNLLPVEGTRLFYAHADALNGPRTFVLLGNQQHLTFVADIDGYIEPSSLRSLLIDRFGLYPHLVDLDPTPGLPRVFDEQQPSDRG*
Ga0066678_100505211	3300005181	Soil	VTSPPAPIHATNAWNPTGRNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEDHVDPALLRSVLIERFGLYPHLIDLDPAPGLPRLVEDQPSPG*
Ga0066678_104753961	3300005181	Soil	ARHFMIVIHATNAWNPTGRNLLPVPGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVEGHVEPASLRQLAIDRFGLYPHLVDQDPAPGLPRIAEVRS*
Ga0066671_103906171	3300005184	Soil	DQTPIHATNAWNPTGRNLQPVPGTRLFYAHADTLGGPRTFVLLGDQQHLTFVGDLEGQLEPTALRDLMIDQGLYPHQLDLEPLPGLPCVTDSPKELSR*
Ga0066388_1035328292	3300005332	Tropical Forest Soil	VSPSPGASLIHATNAWNPTGLNLLGVPGTRLFYAHAEALSGPRTLVLLGDQHHLTFVGDFESHVDPTSLRDRLVHECGLYPHLVDAH*
Ga0070689_1010663122	3300005340	Switchgrass Rhizosphere	SGALVSLIHATNAWNPTGHNLLGVPDTRLFYVHAEALSGPRTGVFLGTQHHLVFVADLPDHVPPATLRARVLTEAHLYPHLVDLEPAPGAPHVFADRADDP*
Ga0070675_1018644151	3300005354	Miscanthus Rhizosphere	CRSRLRSLFRSVIHATNAWNPTGQNLQEVPGTRLFFVHADALSGPRTYVFLGSQQHLTFVADFAEHVPPSELRERALHEIGLYPHLVDAA*
Ga0070714_1021525651	3300005435	Agricultural Soil	VPTPVHATNAWNPTGRDLQPVDGTRLFYAHAQALSGARTYVLLGSQKHLTFVADLEGHVDPSELRSRLIEEYGLYPHLVDAEPEPGLPRVTPT*
Ga0070713_1004882282	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSIPPIHATNAWNPTGRDLQPVAGTRLFYTHANALSGPHTYVLLGDQKHLTFVADLEGHLAPASIRRVVVNDLRVYPHLVDLEPAPGLPRLRPAP*
Ga0066682_104430631	3300005450	Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDSHVAPEHLRDKVLEVAGLYPHLVDAVDAVDAVDASATPAGR*
Ga0070706_1004525272	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIVIHATNAWNPTGRNLLPVPGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVEGHVEPASLRQLAIDRFGLYPHLVDQDPAPGLPRIAEVRS*
Ga0070698_1001329354	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPQIPAPIHATNAWNPTGRNLQPVPSTRLYYTHADTLSGVRTFVLLGDQHHLTFVADLEGHLDPSSLRDRLIATHGLYPHQVDGEPAPGLPRVSDSTRPTPSSR*
Ga0070698_1007567712	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTQVQTQIHATNAWNATGHNLQPVPGTRLFYAHADALIGPRTFVLLGDQQHLTFVGDLAGHLDPASLRDLMIDAHGLYPYQVDLEPAPGLPRVSDSARLIGRAGPTAG*
Ga0070739_102465982	3300005532	Surface Soil	VSSASPNVIHASNGWNPTGRNLTGLPGTRLFYAHVEALSGLRTYVLLGSQQHLTFVADFEGHVEPGALRDLAIGSAGLYPHLVDVDPAAGLPHLIDPLSREARA*
Ga0070697_1019308201	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LSPIHATNAWNPTGHNLMPIAGTRLYFAHADALSGPRTFVLFGNQQHLTFVADLEGHVDPTTLRSTVIDQFGLYPHLVDIDPAPGLPRLFGGRDEDRNEDRKKKTRPRAQ*
Ga0070730_100101672	3300005537	Surface Soil	LIQLHNQIHATNAWNPTGRNLQPVPGTRLFYAHADTLTGPRTLVLLGDQQHLTFVGDLEGHLDPTSLRELMIDTHGLYPHQVDLEPGPRLPRVSDSPRPAPR*
Ga0070730_100150844	3300005537	Surface Soil	VIHATNAWNPTGRNLLPVPGTRLFYAHAEGLNGPRTFVLLGNQQHLTFVADVDGHADPTSLRALAIEQFGLYPHLVDLEPAPGLPRVFEPRPGAPQ*
Ga0070730_100694531	3300005537	Surface Soil	VPSPIHATNAWNPTGLNLHPVPDTRLYFAHASSLSGPRTYVLLGDQKHLTFVADIEEHVDPLQLRDLLIERYGLYPHLLDADPEPGLP
Ga0070730_102147612	3300005537	Surface Soil	VTQPVIHATNAWNPTGRNLLPVPGTRLFYAHADALNGPRTFVLLGSQQHLTFVADIEGHTEPSALRALAIDRFGLYPHLVDQQPAPGLPRVLERSPGAPA*
Ga0070732_100609432	3300005542	Surface Soil	VPLPIHATNAWNPTGRDLLPIDGTRLFYCHADRLAGERTFVLLGDQKHLTFVADMEGHIDPARLRALMIERFGLYPHLLDADPAPGLQRVR*
Ga0070732_102440972	3300005542	Surface Soil	VALPIHATNAWNPTGLDLPPIEGTRLYYRHAETLDGPRTFVLLGDQKHLTFVADIEGYVDPSNLRQHMIERCGLYPHLVDRAPAPGLPRVTPR*
Ga0066707_102396642	3300005556	Soil	VTSPPAPIHATNAWNPTGRNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEDHVDPASLRSVLIERFGLYPHLIDLDPAPGLPRLFEDQPSPG*
Ga0066699_106766741	3300005561	Soil	MNSTPAPIHATNAWNPTGHNLLPVAGTRLFYAHADALNGPRTYVLLGSQQHLTFVADLEGHVEPGSLRSLLIDRFGLYPHLIDLDPAPGLALA*
Ga0066702_106423362	3300005575	Soil	MSSTLAPIHATNAWNPTGHNLLPVAGTRLFYAHADALNGPRTYVLLGSQQHLTFVADLEGHVEPGSLRSLLIDRFGVYPHLIDVDPAPGLPRVVNDQREQA*
Ga0066706_104245871	3300005598	Soil	VTSPPAPIHATNAWNPTGRNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEDHVDPASLRSVLIERFGLYPHLIDLDPAPGLPRLFEDQRSPG*
Ga0068856_1006504222	3300005614	Corn Rhizosphere	VIHATNAWNPTGRNLLGVPGTRLFYAHAEGLNGPRTFVLLGSQQHLTFVADVEGHIEPAALRALAISAYGIYPHLVDLEPAPGLPRVLEVSSPVGA*
Ga0068859_1027192502	3300005617	Switchgrass Rhizosphere	MSLIHASNAWNPTGHNLLGVPDTRLFYLHAEALSGPRTSVFLGTQHHLVFVADLAGHIPPAELRAQVLTAAHLYPHL
Ga0068864_1017793752	3300005618	Switchgrass Rhizosphere	MSLIHASNAWNPTGHNLLGVPDTRLFYLHAEALSGPRTSVFLGTQHHLVFVADLAGHIPPAELRAQVLTAAHLYPHLVDLEPPVGAPHVFADRADDT*
Ga0066903_1002571943	3300005764	Tropical Forest Soil	VRVLHDVLDVSSTPAPIHATNAWNPTGRNLLPVAGTRLFYTHADALNGPRTYVLLGNQRHLTFVADLEGHVEPGSLRSLLIDRFGLYPHLIDLDPAPGLPRVSDDQRETA*
Ga0066903_1007076962	3300005764	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFVADLEGHVASEQLRDQVVEVAGLYPHLVDLESPYATAQRRDH*
Ga0066903_1009893612	3300005764	Tropical Forest Soil	VPTPAIHATNAWNPTGRDLLPVAGTRLFYTHAEALSGPRTFVLLGNQKHLTFVADFEGHLEASALRDAVIRDCHMYPHLVDLDPAPGLPRLSPTS*
Ga0066903_1026240991	3300005764	Tropical Forest Soil	IHATNAWNPTGRDLTPVAGTRLFYTHAEALSGPRTFVLLGDQKHLTFVADVEGHVEPSAMRELVVTELHLYPHLVDLEPAPGLPHIRTGRQG*
Ga0066789_101692411	3300005994	Soil	VRPNPPQIQLAPPTQPAIHATNAWNPTGRNLLPVSGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVDGHIEPGSLRELTIDRFGLYPHLVDLEPAPGLPRLSG
Ga0066696_106810162	3300006032	Soil	LPGHGVRDRLIKDQTPIHATNAWNPTGRNLQPVPGTRLFYAHADTLGGPRTFVLLGDQQHLTFVGDLEGQLEPAALRDLMIDQGLYPHQLDLEPL
Ga0075426_109971411	3300006903	Populus Rhizosphere	QHQLMPNPIHATNAWNPTGRNLQPVPKTRLFYCHADALSGPRTYVLLGNQQHLTFVGDLEGHVAVEDLRSIVLDRYGLYPHLVDLEPAEGVPRPVDNALG*
Ga0105679_102233531	3300007790	Soil	VPIHATNAWNPTGRHLLPIPGTRLYYVHAESLSGRRTFVLLGSQQHLTFVADLPEHVEPSALRSLLVEQSGLYPHLVDAAPADGPPRTRAEGA
Ga0066710_1006500791	3300009012	Grasslands Soil	VTSPPAPIHATNAWNPTGHNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEDHVDPASLRSVLIERFGLYPHLIDLDPAPGLPRLFEDQRSPG
Ga0066710_1009933811	3300009012	Grasslands Soil	RLIKDQTPIHATNAWNPTGRNLQPVPGTRLFYAHADTLGGPRTFVLLGDQQHLTFVGDLEGQLEPTSLRELMIDRHGLYPHQVDLEPRPGLPRVGDYSTGSSR
Ga0066710_1013816502	3300009012	Grasslands Soil	VTPVQTQIHATNAWNPTGRTLLAVPDTRLFYCHADTLTGPRTFVLLGDQQHLTFVADLEGHVDPSSLRDLLIDVHGLYPHQVDLEPAEGLPRVSDSTRPIAPR
Ga0066710_1014374711	3300009012	Grasslands Soil	VIHATNAWNPTGRNLQPVPGTRLFYAHAEALNGPRTFVLLGSQQHLTFVADLEGHMDPASLRSLLIERFGLYPHLVDLAPAPGLPRVLEAGHVHHVRP
Ga0066710_1025890641	3300009012	Grasslands Soil	PTGRNLLPIVGTRLYYTHADALNGPRTYVFLGDQHHLTFIADLEGQVEPSTLRSLVIERFGLYPHLVDTDPAPGLPRLFASERPR
Ga0066710_1030185492	3300009012	Grasslands Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHANALSGPRTYVFLGSQKHLTFVADLDSHVAPEHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR
Ga0099829_109570861	3300009038	Vadose Zone Soil	GRNLQPVPGTRLYYAHADALTGPRTFVLLGDQQHLTFVGDLEGHLDPASLRDLMIDAYGLYPHQVDLEPAPGLPRVSDSARLIGRAGSTAA*
Ga0099830_118664762	3300009088	Vadose Zone Soil	QPVPGTRLYYAHADALTGPRTFVLLGDQQHLTFVGDLEGHLDPASLRGLMIDAYGLYPHQVDLEPAPGLPRVSDSARLIGRAGSTAG*
Ga0099828_109684952	3300009089	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLYYAHADALIGPRTFVLLGDQQHLTFVGDLEGHLDPASLRDLMIDAYGLYPHQVDLEPASGLPHVSDSARLIGRAGSTAG*
Ga0099827_108856712	3300009090	Vadose Zone Soil	VSTSAVTIHATNAWNPTGRNLLPIPGTRLYYAHAEALNGPRTFVLLGDQQHLTFVADLEDHVDPAALRSILIDRFGLYPHLVDLEPGPGLPRVSVADGVSTRA*
Ga0111539_119685042	3300009094	Populus Rhizosphere	VIHATNAWNPTGHNLHEVPGTRLFYVHAEALSGPRTYVFLGTQQHLTFVADFAEHVPPTDLRERALREIGLYPHLVDAA*
Ga0066709_1013158842	3300009137	Grasslands Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDSHVAREHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR*
Ga0066709_1026366562	3300009137	Grasslands Soil	VSSSAVPIHATNAWNPTGRNLLPIPGTRLYYAHAEALNGPRTFVLLGDQQHLTFVADLEEHVDPTSLRAILIDRFGLYPHLVDLEPAPGMPRVRIADGGTRRS*
Ga0111538_135521561	3300009156	Populus Rhizosphere	VIHATNAWNPTGQNLLAVPGTRLFYVHVTALSGPRTYVFLGTQQHLTFVADFVDHVPPEELRERTLREFGLYPHLVDAT
Ga0126315_107059822	3300010038	Serpentine Soil	VSTSPPPIHATNAWNPTGRNLLPVPNTRLYYTHADALSGPRTFVFLGSQHHLTFVADLEEHLDPSSLRSLVIDKFGLYPHLVDLEPAPGLPRVVADRRARST*
Ga0126382_122016921	3300010047	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFVADLEGHVAPEQLRDQVIQVAGLYPHLVDLESPYATAQRRDH*
Ga0126373_121625812	3300010048	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFVADVEGHVAPEQLREQVIEVAGLYPHLVDLESPYVATHRRDH*
Ga0126318_100355872	3300010152	Soil	VALPIHATNAWNPTGRDLLPVVGTRLYYGYAETVDGPRTLVLLGDQKHLTFIADFEGEVHPSELRARAIDGLGLYPHLIDEEPAAGLPRVVAR*
Ga0126370_109749981	3300010358	Tropical Forest Soil	LHGVPGTRLFYAHAEALSGPRTLVLLGDQHHLTFIGDFESHVDPTSLRDRLVHECGLYPHLVDAR*
Ga0126370_119887341	3300010358	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFVADLEGHVAPEQLRDQVIQVAGLYPHLVDLESPYATAHRQDHG*
Ga0126376_103052832	3300010359	Tropical Forest Soil	LHGVPGTRLFYAHAEALSGPRTLVLLGDQHHLTFVGDFESHVDPTSLRDRLVHECGLYPHLVDAR*
Ga0126378_102110462	3300010361	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFAADLEGHVASEQLRDQVVEVAGLYPHLVDLESPY
Ga0126379_109807551	3300010366	Tropical Forest Soil	MPHNPIHATNAWNSTGRNLLPVPDTRLFFCHVDALSGPRTYVMLGNQQHLTFVADLDGHVRADELRSIVIEQLGLYPHLVDVDPAPGLPRVRPERP*
Ga0134125_108190741	3300010371	Terrestrial Soil	VPNPPIHATNAWNPTGRDLRPIEGTRLYFAHADALNGPRTFVLLGDQKHLTFVADIEGYIEASDVRSLLVERFGLYPHLLDDPPAAGLPRVTPA*
Ga0126381_1030582331	3300010376	Tropical Forest Soil	MDHSTGLSMPHNPIHATNAWNSTGRNLLPVPDTRLFFCHVDALSGPRTYVMLGNQQHLTFVADLDGHVRADALRSIVIEQLGLYPHLVDVEPAPGLPRV
Ga0126381_1031971402	3300010376	Tropical Forest Soil	VRAPIHATNAWNPTGRNLLPVEGTRLYYAHADALSGPRTFVLLGDQKHLTFVADIEGYVEATDLRALMIERFGLYPHLLDVDPVPGLPRLFEEQGRRRP*
Ga0126383_106184352	3300010398	Tropical Forest Soil	VIHATNAWNPTGHNLLPVPGTRLFYVHVEALSGPRTYVFLGSQQHLVFVADLEGHVAPEQLRDQVIQVAGLYPHLVDLESPYATAHRRDH*
Ga0126383_115441762	3300010398	Tropical Forest Soil	MPHNPIRATNAWNSTGRNLLPVPDTRLFFCHVDALSGPRTYVMLGNQQHLTFVADLDGHVPADALRSIVIEQLGLYPHLVDVDPAPGLPRVRPERP*
Ga0137391_101586121	3300011270	Vadose Zone Soil	MTQPPIHATNAWNPTGHNLQPVPGTRLYYADADTLTGPRTFVLLGDQHHLTFVADLEGHLDPNSLRDLLIASQGLYPHQVDLEPAPGLPRVHDSLRPIAPAR*
Ga0137391_102298352	3300011270	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLYYAHADALTGPRTFVLLGDQQHLTFVGDLERHLDPASLRDLMIDAYGLYPHQVDLEPAPGLPRVSDSARLIGRAGSTPG*
Ga0137391_105257341	3300011270	Vadose Zone Soil	VSSSAAPIHATNAWNPTGRNLLPIPGTRLYYAHAEALDGPRTFVLLGDQQHLTFVADLEDHVDAAALRSILIDRFGLYPHLVDLEPAPGLPRISFKDGVSTRS*
Ga0137393_104061212	3300011271	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLYYAHADALTGPRTFVLLGDQQHLTFVGDLEGHLDPASLRDLMIDAHGLYPHQVDLEPAPGLPRVSDSARLTGRAGSTPG*
Ga0137389_106382772	3300012096	Vadose Zone Soil	VTQAQTPIHATNAWNPTGRNLQPVPGTRLFYAHADTLSGPRTFVLLGDQQHLTFVGDLEGHVDPSLLRDLMIDACGLYPHQVDLEPAPGLPRVSDSARSGPSAH*
Ga0137389_108970112	3300012096	Vadose Zone Soil	VISPIHATNAWNPTGRNLLPVAGTRLFYTHADALNGNRTFVLLGDQHHLTFVADLEGYVEPSALRSLLIERFGLYPHLVDRDPAPGLPRLLENQRQPR*
Ga0137389_109191742	3300012096	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLFYAHADALTGQRTFVLLGDQQHLTFVGDLEGHLDPASLRDLMIDAYGLYPHQVDLEPAPGLPRVSDSARLIGRAGSTAG*
Ga0137382_113013382	3300012200	Vadose Zone Soil	VIHATNAWNPTGHNLDEVPGTRLFYVHAEALSGPRTYVFLGNQQHLTFVADFAEHVPPTDLRERAVREIGLYPHLVDAA*
Ga0137374_100113202	3300012204	Vadose Zone Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDLHVPPEHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR*
Ga0137380_116470911	3300012206	Vadose Zone Soil	PIHATNAWNPTGRNLLPVAGTRLFYSHAETLSGPRTFVLLGNQQHLTFVADLEGHAEPTSLRALLVERSGLYPHLVDLDPAPGLPRLFEEQQRPT*
Ga0150985_1042113522	3300012212	Avena Fatua Rhizosphere	VPTLPIHSTNAWNPTGRDLSPIEGTRLYYTHGDALNGPRTFVLLGDQKHLTFVADLEGHVDPSEVRGVLIARFGIYPHLIDSADSASDSAPSPTRRTDGR*
Ga0150985_1161685632	3300012212	Avena Fatua Rhizosphere	VIHATNAWNPTGHNLYEVPRTRLFYVHAEALSGPRTYVFLGTQQHLTFVADFAEHVPPTDLRERTLREIGLYPHLVDAA*
Ga0137369_100933352	3300012355	Vadose Zone Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDLHVAPEHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR*
Ga0137368_100777143	3300012358	Vadose Zone Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDLHVPPEHLRDKVLEVAGLYPHLVDAVDASATPAGR*
Ga0137385_113670192	3300012359	Vadose Zone Soil	MIVIHTTNAWNPTGRNLLPVPGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVEGHVEPASLRQLAIDRFGLYPHLVDQDPAPGL
Ga0137375_108538292	3300012360	Vadose Zone Soil	GTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDSHVPPEHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR*
Ga0137390_102520993	3300012363	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLFYAHADALTGPRTFVLLGDQQHLTFVGDLERHLDPASLRDLMIDAHGLYPHQVDLEPAPGLPRVSDSARLTGRAGSTPG*
Ga0137390_107113382	3300012363	Vadose Zone Soil	VSAPSSPIHATNAWNPTGRNLLPVAGTRLFYAHATALSGLRTFVLLGNQQHLTFAADLEGHIDPITLRSTVIDRFGLYPHLVDLDPAPGLPRLFEEQKQRPR*
Ga0150984_1037380382	3300012469	Avena Fatua Rhizosphere	VIHATNAWNPTGLNLHSVPGTRLFYVHADALSGPRTYVFLGNQQHLTFVADFVDHVPPSDLRERALREIGLYPHLVDAA*
Ga0137373_106533041	3300012532	Vadose Zone Soil	TGQNLTAVPGTRLFSVHADALSGPRTYVFLGSQQHLTFVADLDLHVAPEHLRDKVLEVAGLYPHLVDAVDAVDASATPAGR*
Ga0137373_108748552	3300012532	Vadose Zone Soil	VIHATNAWNPTGQNLTAVPGTRLFYVHADALSGPRTYVFLGSQQHLTFVADLDSHVPPEHLRDKVLEVAGLYPHLVDAVDASATPAGR*
Ga0126369_128044302	3300012971	Tropical Forest Soil	VSPSPSANLIHATNAWNPTGLNLHGVPGTRLFYAHAEALSGPRTLVLLGDQHHLTFVGDFESHLDPTSLRDRVVHECGLYPHLVDA
Ga0126369_134715971	3300012971	Tropical Forest Soil	GPSMPHNPIHATNAWNSTGRNLLPVPDTRLFFCHVDALSGPRTYVMLGNQQHLTFVADLDGHVPFEALRSIVIEQLGLYPHLVDVDPAPGLPRVRPERP*
Ga0134087_105748371	3300012977	Grasslands Soil	MNSTPAPIHATNAWNPTGHNLLPVAGTRLFYAHADALNGPRTYVLLGSQQHLTLVADLEGHVEPGSLRSLLIDRFGLYPHLIDLDPAPGLPRVVGDQREQA*
Ga0157375_118982281	3300013308	Miscanthus Rhizosphere	PPLPSSLMDRARMPQNPIHATNAWNPTGRNLLPVPNTRLFFCHVEALSGPRTFVMLGDQRHLTFVADLEGHVPSESLRAIVVDQFGLYPHLVDTEPAPGLPRIVDRDAGFRQAD*
Ga0120127_101530461	3300013503	Permafrost	VIHATNAWNPTGRNLLAVPGTRLFYAHAEGLNGPRTFVLLGSQQHLTFVADVEGHIDPLSLRPLAINEYGIYPHLVDLEPAPGLPRVSAAPVGMQQ*
Ga0120155_11201482	3300013768	Permafrost	LIHATNAWNPTGRNLQPVPGTRLFYAHADTLNGPRTVVLLGDQQHLTFVADIEGHADPATLRALAIDQFGLYPHLVDLNPAPGQPRLLPEVALR*
Ga0120104_10839402	3300014829	Permafrost	VIHATNAWNPTGRNLLPVPGTRLFYVHAEALNGPRTFVLLGNQQHLTFVADVEDHVDPASLRQLAIDRFGLYPHLVDLEPAPTADGPEHAAYG
Ga0132257_1035497981	3300015373	Arabidopsis Rhizosphere	TNAWNPTGQHLSAVPGTRLYYVHTEALSGPRTYVFLGTQQHLTFVADLTDHVPAAELRARVLEAAGLYPHLVDGGSVADVKHAPQL*
Ga0066667_110806992	3300018433	Grasslands Soil	PTGHNLQPVPGTRLFFTHADALNGPRTYVLLGNQRHLTFVADLEDHVDPASLRSVLIERFGLYPHLIDLDPAPGLPRLFEDQPSPG
Ga0066662_112100131	3300018468	Grasslands Soil	MTSTPAPIHATNAWNPTGHNLLPVAGTRLFYAHADALNGPRTYVLLGSQQHLTFVADLEGHVEPGSLRSLLIDRFGLYPHLIDLDPAPGLPRVVNDQREQA
Ga0066662_129964041	3300018468	Grasslands Soil	MGRSSQPRSAAPVAPPHPPIHATNAWNPTGRNLQPVPGTRLYYTHAVTLNGPRTVVLLGDEHHLTVVADLEGHLEPTSLRDLLIVSHGAYPHQVDLDPAPGLPRVSDSTRPT
Ga0066669_123357911	3300018482	Grasslands Soil	MTQSPIHATNAWNPTGRNLQPVSGTRLYFCHVEALNGERTYVFLGSQQHLTFVADLEGHGAPESLRSLLIERYGLYPHLVDLRAES
Ga0206356_114934011	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MASPPHSFRGAQSSPRPPIHATNAWNPTGCNLQPVPATRLYFAHADRLNGPRTFVLLGTQQHLTFVADLDGTHDPASLRSLMIDQFGLYPHLIDLDPAPGLPRVADPRGRDGAPQ
Ga0213882_104789522	3300021362	Exposed Rock	VIHATNAWNPTGHNLAAVPGTRLYYAHAESLSGPRTYVLLGDQHHLTFVADVEGHVPESDLRQLVLDQCGLYPHLVDAEPEPGLPRVLAPPRVQR
Ga0213882_105319411	3300021362	Exposed Rock	GVDPDRAARNPAQHLVIHATNAWNPTGSNLLPVPGTRLYFTHAVGLNGPRTFVLLGDQQHLTFVADFDGHVAPEQLRQVVLDQAGLYPHLVDAEPAPGLPRVPAAALGSAR
Ga0213876_100509192	3300021384	Plant Roots	VIHATNAWNPTGSNLLPVPGTRLYFAHAVGLNGPRTFVLLGDQQHLTFVADLDGHVAPEQLRQVVLDQAGLYPHLVDAEPAPGLPRVPASALGSAR
Ga0213876_101168892	3300021384	Plant Roots	VIHATNAWNPTGSNLLPVPATRLYFTHAVGLNGPRTFVLLGDQQHLTFVADLDGHVAPERLRQVVLDQAGLYPHLVDAEPAPGLPRVPAAALGSAR
Ga0213875_100335443	3300021388	Plant Roots	MPAPIHATNAWNPTGRDLQPVAGTRLYYAHAASLSGDRTFVLLGDQKHLTFVADLEGHVQPSELRGILIERFGLYPHLLDIDPAPGLPRLVS
Ga0213875_102176651	3300021388	Plant Roots	VSPTPNPIHATNAWNPTGRTLQPVPGTRLYYAHADALGGPRTFVLLGNQHHLTFVADLEGHVAPETLRDLLIERYGLYPHLLDLDPAPGLPRLFEEQSPAS
Ga0247674_10464031	3300024275	Soil	HVSIPPIHATNAWNPTGRDLQPIGSTRLFYTHADALSGPHTYVLLGDQKHLTFVADLEGHLAPASIRRVVVNDLRVYPHLVDLEPAPGLPRLRPAP
Ga0207684_103540412	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIVIHATNAWNPTGRNLLPVPGTRLFYAHAEALNGPRTFVLLGNQQHLTFVADVEGHVEPASLRQLAIDRFGLYPHLVDQDPAPGLPRIAEVRS
Ga0207646_101796121	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPQIPAPIHATNAWNPTGRNLQPVPSTRLYYTHADTLSGARTFVLLGDQHHLTFVADLEGHLDPSSLRDRLIATHGLYPHQVDGEPAPGLPRVSDSTRPTPSSH
Ga0207701_116304982	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VIHATNAWNPTGHNLLPVAGTRLYYVHLDGLSGPRTAVFLGDQRHLTFVADLDTHVPEASLRGVVLSSVNLYPHLVDDPPESGLPRVTGQST
Ga0207702_110253782	3300026078	Corn Rhizosphere	VIHATNAWNPTGRNLLGVPGTRLFYAHAEGLNGPRTFVLLGSQQHLTFVADVEGHIEPAALRALAISAYGIYPHLVDLEPAPGLPRALEVSSPVGA
Ga0209689_12705451	3300027748	Soil	VTSPPAPIHATNAWNPTGRNLQPVPGTRLFFTHDDALNGPRTYVLLGNQRHLTFVADLEDHVDPASLRSVLIERFGIYPHLIDLDPAPGLPRLFEDQQSPG
Ga0209810_11975042	3300027773	Surface Soil	VSSASPNVIHASNGWNPTGRNLTGLPGTRLFYAHVEALSGLRTYVLLGSQQHLTFVADFEGHVEPGALRDLAIGSAGLYPHLVDVDPAAGLPHLIDPLSREARA
Ga0209580_102662232	3300027842	Surface Soil	VPLPIHATNAWNPTGRDLLPIDGTRLFYCHADRLAGERTFVLLGDQKHLTFVADMEGHIDPARLRALMIERFGLYPHLLDADPAPGLQRVR
Ga0209580_104996471	3300027842	Surface Soil	WNPTGLDLPPIEGTRLYYRHAETLDGPRTFVLLGDQKHLTFVADIEGYVDPSNLRQHMIERCGLYPHLVDRAPAPGLPRVTPR
Ga0209166_100832362	3300027857	Surface Soil	LIQLHNQIHATNAWNPTGRNLQPVPGTRLFYAHADTLTGPRTLVLLGDQQHLTFVGDLKGHLDPTSLRELMIDTHGLYPHQVDLEPGPRLPRVSDSPRPAPR
Ga0209166_100964732	3300027857	Surface Soil	VIHATNAWNPTGRNLLPVPGTRLFYAHAEGLNGPRTFVLLGNQQHLTFVADVDGHADPTSLRALAIEQFGLYPHLVDLEPAPGLPRVFEPRPGAPQ
Ga0209283_108032051	3300027875	Vadose Zone Soil	LTQVQTPIHATNAWNPTGRNLQPVPGTRLYYAHADALIGPRTFVLLGDQQHLTFVGDLEGHLDPASLRDLMIDAYGLYPHQVDLEPASGLPHVSDSARLIGRAGSTAG
Ga0268265_124110201	3300028380	Switchgrass Rhizosphere	MSLIHASNAWNPTGHNLLGVPDTRLFYLHAEALSGPRTSVFLGTQHHLVFVADLAGHIPPAELRAQVLTAAHLYPHLVDLEPPVGAPHVFADRADDT
Ga0272428_10092969	3300031520	Rock	VIHATNAWNPTGRNLLPVPGTRLFYQHAEALNGPRTFVLLGSQQHLTFVVDVEGHVEPTALRQLAIDRFGLYPHLVDLEPAAGLPRVVEARS
Ga0307472_1024435512	3300032205	Hardwood Forest Soil	IHATNAWNPTGRNLLPVPGTRLFYAHAAALNGPRTFVLLGSQQHLTFVADLDGHIDPASLRTLAIDRFGLYPHLVDLDPAPGLPRLQEAGAR
Ga0372946_0131525_635_964	3300034384	Soil	MSRTAGPVAPPPAPIHATNAWNPTGRNLQPVPGTRLYFAHADALNGQRTFVLLGNQQHLTFVADLPDHVPAAELRAIVLSQFGLYPHLVDLEPAAGLPRPVNENPRHRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences