Metagenome Family F069516

Basic Information
Family ID	F069516
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	49 residues
Representative Sequence	YTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Number of Associated Samples	24
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.35 %
% of genes near scaffold ends (potentially truncated)	16.26 %
% of genes from short scaffolds (< 2000 bps)	16.26 %
Associated GOLD sequencing projects	24
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (96.748 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (78.862 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (81.301 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 56.00% Coil/Unstructured: 44.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03732	Retrotrans_gag	30.89
PF00078	RVT_1	2.44
PF04739	AMPKBI	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
All Organisms	root	All Organisms	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
cellular organisms	root	All Organisms → cellular organisms	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Malpighiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Salicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Saliceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.75 %
Populus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300028786\|Ga0307517_10335474	Not Available	829	Open in IMG/M
3300028786\|Ga0307517_10448051	Not Available	669	Open in IMG/M
3300028786\|Ga0307517_10546940	Not Available	579	Open in IMG/M
3300028786\|Ga0307517_10664502	Not Available	505	Open in IMG/M
3300028794\|Ga0307515_10258517	Not Available	1481	Open in IMG/M
3300028794\|Ga0307515_10838988	Not Available	544	Open in IMG/M
3300030521\|Ga0307511_10367560	Not Available	608	Open in IMG/M
3300031456\|Ga0307513_10708209	Not Available	712	Open in IMG/M
3300031456\|Ga0307513_10894070	Not Available	595	Open in IMG/M
3300031456\|Ga0307513_11092895	Not Available	509	Open in IMG/M
3300031616\|Ga0307508_10158862	Not Available	1864	Open in IMG/M
3300031616\|Ga0307508_10615391	Not Available	688	Open in IMG/M
3300031649\|Ga0307514_10116444	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1877	Open in IMG/M
3300031649\|Ga0307514_10535558	Not Available	545	Open in IMG/M
3300031838\|Ga0307518_10536040	Not Available	586	Open in IMG/M
3300031838\|Ga0307518_10550937	Not Available	571	Open in IMG/M
3300032354\|Ga0325403_1000227	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	34607	Open in IMG/M
3300032354\|Ga0325403_1043907	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	3325	Open in IMG/M
3300032354\|Ga0325403_1043930	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	3323	Open in IMG/M
3300032354\|Ga0325403_1079267	Not Available	1686	Open in IMG/M
3300033180\|Ga0307510_10456531	Not Available	718	Open in IMG/M
3300033180\|Ga0307510_10490704	Not Available	670	Open in IMG/M
3300033180\|Ga0307510_10609554	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	78.86%
Wood	Host-Associated → Plants → Wood	15.45%
Phylloplane	Host-Associated → Plants → Phylloplane	5.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	78.86%
Unclassified	Host-Associated → Plants → Wood → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	78.86%
Unclassified	Host-Associated → Plants → Wood → Unclassified → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.69%

Habitat	Taxonomy	Distribution
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	78.86%
Xylem	Host-Associated → Plants → Wood → Unclassified → Unclassified → Xylem	15.45%
Leaf	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf	5.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030522	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM	Host-Associated	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031649	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM	Host-Associated	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031838	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM	Host-Associated	Open in IMG/M
3300032354	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R4	Host-Associated	Open in IMG/M
3300032355	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R2	Host-Associated	Open in IMG/M
3300032374	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R1	Host-Associated	Open in IMG/M
3300032389	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R2	Host-Associated	Open in IMG/M
3300032390	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R1	Host-Associated	Open in IMG/M
3300032735	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdIQD-R3	Host-Associated	Open in IMG/M
3300032741	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdKOR-R3	Host-Associated	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034389	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-Control-R4	Host-Associated	Open in IMG/M
3300034688	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R1	Host-Associated	Open in IMG/M
3300034689	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R2	Host-Associated	Open in IMG/M
3300034778	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R4	Host-Associated	Open in IMG/M
3300034899	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R4	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0307517_101785113	3300028786	Ectomycorrhiza	MFEARVINLCDRDIAINFGAVADEVILVDSYACTVIFICSD
Ga0307517_101864991	3300028786	Ectomycorrhiza	VGSTPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307517_102723081	3300028786	Ectomycorrhiza	TILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICYDCCFFF
Ga0307517_103324521	3300028786	Ectomycorrhiza	LLALYYLVCLFEARVINLCDRDIAINFGDVAGEVILVDSCAIIFICCDCYFFF
Ga0307517_103354741	3300028786	Ectomycorrhiza	INLCDHDIITNFGVVAREVILADSCAIIFICCDCYLFF
Ga0307517_103530561	3300028786	Ectomycorrhiza	VGLTPYLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSC
Ga0307517_104311521	3300028786	Ectomycorrhiza	CVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCYCYFFF
Ga0307517_104480513	3300028786	Ectomycorrhiza	NLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307517_105469401	3300028786	Ectomycorrhiza	LCDRDIATNFGAAAGEVILVDSCAIIFICCGCYFFF
Ga0307517_105873601	3300028786	Ectomycorrhiza	LVGSTPCLLYTILCVVFEARVINLCDRDIVTNFGVVAGEVILVDSCACTVIFSCCDCYLY
Ga0307517_106645021	3300028786	Ectomycorrhiza	TPCLLYTILCVMFEVRVINLCDCNIATNFGAVAGEVILVDSCAIIFIFYDFYLFF
Ga0307517_106660081	3300028786	Ectomycorrhiza	CVVFEARVINLCDRDIATNFGAVAGEVILVDSCGYHVIFIFYD
Ga0307515_101971953	3300028794	Ectomycorrhiza	ILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFIFYD
Ga0307515_102585174	3300028794	Ectomycorrhiza	LYTILCVVFEARVINLCDRDIAINFGDVAGEVILVDSCAIIFICCDCYFFF
Ga0307515_102671423	3300028794	Ectomycorrhiza	LCDRDIATNFGAIAGEVILVDSCAIIFICCDCYFFF
Ga0307515_103711082	3300028794	Ectomycorrhiza	FEARVINLCDRDIATNFGTVAGEVILVNSCAIIFICCDCYFFF
Ga0307515_104908872	3300028794	Ectomycorrhiza	GSTPCLLYTILCVVFEARVINLCDRDIAINFGVVAGDVILVDSCAIIFICYDFHLFFWKKKET
Ga0307515_104970951	3300028794	Ectomycorrhiza	LVGSTPCLLYTILCVVFEARVINLCDRDIATNFGAIAGEVILVDSCAIIFICCDCYLFF
Ga0307515_105780731	3300028794	Ectomycorrhiza	CVVFEARVINLCDRDIATNFGVVAGEVILVDSCAIIFICCDCYFFF
Ga0307515_106447682	3300028794	Ectomycorrhiza	RVINLCDRDIATNFGAIAGEVILVDSCAIIFICCDCYLFF
Ga0307515_107162461	3300028794	Ectomycorrhiza	LYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFICCD
Ga0307515_108389881	3300028794	Ectomycorrhiza	ILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIFCDCYLFF
Ga0307515_108807593	3300028794	Ectomycorrhiza	VGSTPCLLYTILCVVFEVRVINLCDRDIATNFDAVAGEVILVDFCAIIFICCDCYFFF
Ga0307511_102006361	3300030521	Ectomycorrhiza	INLCDRDIATNFGAVAGEVILVDSCAIIFIYCDCYLFF
Ga0307511_102233581	3300030521	Ectomycorrhiza	STPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307511_102414353	3300030521	Ectomycorrhiza	KSDLNFLVGSTICLLYTILCVVFEARVINLCDCDIGTNFGVVAREVILVDSCGIIFICCDCYFFF
Ga0307511_102479783	3300030521	Ectomycorrhiza	INLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307511_102757121	3300030521	Ectomycorrhiza	LCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFL
Ga0307511_103086103	3300030521	Ectomycorrhiza	CLLYTILCVVFEARVINLCDRDIATNFGVVAGEVILVNSCAIIFICCDYYLFF
Ga0307511_103675603	3300030521	Ectomycorrhiza	CARDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307512_100957326	3300030522	Ectomycorrhiza	SLCDRYIATSFDVITGEVILVDSCAIIFIFCDCYLFF
Ga0307512_102396601	3300030522	Ectomycorrhiza	ARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307512_102826212	3300030522	Ectomycorrhiza	VFESRVINLCDRDIATNFGAVVGEVILVDSCAIIFICCDCYLFF
Ga0307512_102834401	3300030522	Ectomycorrhiza	LCDRDIATNFGVVAGEVILVDSCAYIVIFICCDCYLFF
Ga0307512_104125831	3300030522	Ectomycorrhiza	VFEARVINLCDRDIATKFGAAAGEVILVDSCACTVIFICCDSKKK
Ga0307513_100368334	3300031456	Ectomycorrhiza	MGSTPCLLYTILCVVFEARVINLCDRDIETNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307513_100685981	3300031456	Ectomycorrhiza	VGSTPCLLYTILCVVFEARVINLYDRDIATNFGAIVGEVILVDSCAIIFICCDCYLFF
Ga0307513_101822721	3300031456	Ectomycorrhiza	VINLCDRDIATNFGVVAGEVILVNSCAIIFICCDYYLFF
Ga0307513_102266401	3300031456	Ectomycorrhiza	HKNLTSTFLVGSTPCLLYTILCVVFEARVINLCDRDIAINFGAVAGDVILVDSCAIIFICCDFYLFF
Ga0307513_103240341	3300031456	Ectomycorrhiza	LYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACSVIFICCD
Ga0307513_105003763	3300031456	Ectomycorrhiza	ILCVVFEARVINLCDRDIATNFGAAAGEVILVDSCAIIFICCDCYFFF
Ga0307513_105560221	3300031456	Ectomycorrhiza	YTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307513_105912911	3300031456	Ectomycorrhiza	LYTILCVVFEARVINLCDCDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307513_107082094	3300031456	Ectomycorrhiza	TCLLYTILCVVFEARVINLCDRDIAKNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307513_108442682	3300031456	Ectomycorrhiza	TILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICYDFCFFF
Ga0307513_108940703	3300031456	Ectomycorrhiza	CVVFEARVINLCDRDIATNFGVVAGEVILVDSCAIIFICYDCCFFF
Ga0307513_110818353	3300031456	Ectomycorrhiza	ILCVVFEARVINLCDRDIATNFGAAAGEVILVDSCAIIFICCGCYFFF
Ga0307513_110928951	3300031456	Ectomycorrhiza	VGTTPCLLYTILCVVFEARVINLCDRDIATNFGVVAGEVILVDS
Ga0307509_105033901	3300031507	Ectomycorrhiza	LCDRDIVTNFGAVAGEVILIDSCAIIFICCDCYLFF
Ga0307509_106172661	3300031507	Ectomycorrhiza	VGSTPCLRYTILCVVFEARVINLCDRDIAKNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307509_106498841	3300031507	Ectomycorrhiza	VFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307509_106520971	3300031507	Ectomycorrhiza	VINLCDRDIATNFGAVAGEVILVDSCAYTVIFICCDCYLFF
Ga0307509_106620681	3300031507	Ectomycorrhiza	ILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFFCYNCYLFF
Ga0307508_101588625	3300031616	Ectomycorrhiza	IFLVGSTPCLLYTILCVVFEARVINLCDRDIAINFDAVAGEVILVDSCAIIFICCGCYFF
Ga0307508_104472631	3300031616	Ectomycorrhiza	VNLCDRDIATNFGAVAREVILVDSCAIIFICCDCYFFFLKKKET
Ga0307508_106153911	3300031616	Ectomycorrhiza	LYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFFCCDCYFFF
Ga0307508_109213011	3300031616	Ectomycorrhiza	VGSTPCLLYTILCVVFEARVINLCDRGIATNFDAVAGEVILVDFCAIIFICCDCYFFF
Ga0307514_101164444	3300031649	Ectomycorrhiza	LLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIFCDFYFFF
Ga0307514_102492153	3300031649	Ectomycorrhiza	LYTILCVVFEARVINLCDCDIAINFGDVAGEVILVDSCAIIFICCDCYFFF
Ga0307514_103333963	3300031649	Ectomycorrhiza	TSLCVMFEVRVINLCDCNIATNFGAVAGEVILVDSCAIIFIFYDFYLFF
Ga0307514_103464962	3300031649	Ectomycorrhiza	LCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFFAIIVIYFSKKKRET
Ga0307514_105355581	3300031649	Ectomycorrhiza	RVINLYDRDIATNFGAVAGEVILVDSCAIIFIFCDCYLFL
Ga0307514_105576481	3300031649	Ectomycorrhiza	VGLTPCLLYAILCVVFEARVINLCDRDIATNFGAIAGEVILVDSCAIIFIYCDCYFF
Ga0307516_101311394	3300031730	Ectomycorrhiza	VESTPCLLYTILCVVFEARVINLCNRDIATNFGTVAREVILVDYCAIIFICCDCYLFF
Ga0307516_102681864	3300031730	Ectomycorrhiza	STPCLLYTILCVVFEARVINLCDRDIATNFGAVVGEVILVDSFTIIFIFYDCYLFF
Ga0307516_103540861	3300031730	Ectomycorrhiza	PYLLYTILCVVFEARVINLCDRDMSTNFGAVAGEVILVDSCAIIFICCDCCFFF
Ga0307516_104011251	3300031730	Ectomycorrhiza	FIVGSTPSLLYTILCVVFEARVINLCDRDIATNFGAVAGEVSLVDSCAIIFICCDCYFFF
Ga0307516_104133231	3300031730	Ectomycorrhiza	EARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307516_104973842	3300031730	Ectomycorrhiza	INLYDRDIATNFGAVAGEVILVDSCAIIFIFCDCYLFL
Ga0307516_105385262	3300031730	Ectomycorrhiza	INLSDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307516_105828401	3300031730	Ectomycorrhiza	FLVGSIPYLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSFAIIFICYDCYLFF
Ga0307518_101393391	3300031838	Ectomycorrhiza	YTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIFCDFYLFF
Ga0307518_101421951	3300031838	Ectomycorrhiza	LCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307518_103179442	3300031838	Ectomycorrhiza	FLVGSTPCLLYTILCVVFEARVINLCDRDIATNFGTVAGEVILVDSYACTVIFSCCDCYLYF
Ga0307518_103594551	3300031838	Ectomycorrhiza	PCLLYTILCVVFEVRVINLCDRDIATNFGAVAREVILVDSYAIIFICCDCYFFF
Ga0307518_104019321	3300031838	Ectomycorrhiza	ARVINLCDRDIATNFSAVAGEVILVDSCAIIFICCDCYLFF
Ga0307518_104152301	3300031838	Ectomycorrhiza	EARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFL
Ga0307518_105360401	3300031838	Ectomycorrhiza	TPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFICCDSKKKRET
Ga0307518_105379591	3300031838	Ectomycorrhiza	LVGSTPCLLYTILCVVFEARVINLCDRDIATNFGVVAGEVILVDSCAIIFICCDCHFFF
Ga0307518_105509371	3300031838	Ectomycorrhiza	IFLVGSTPCLLYTILCVVFEARVINLCDRDIAPNFGAVAGEVILVDSCAIIFICCDCYFFSEKKENFCLLR
Ga0325403_10002279	3300032354	Xylem	VFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIFCDFYFFF
Ga0325403_100393411	3300032354	Xylem	MESTPCLLYTILCVVFEVRVINLCDRDIAINFGAVAGEVILVDSCAIIFICCDCYLFL
Ga0325403_10439074	3300032354	Xylem	MGSTPCLLYTILCVVFEARVINLCDRDIATNFGVVVGEVILVDSCACIVIFSCYDCYLYF
Ga0325403_10439304	3300032354	Xylem	MRLTPCLLYTILCVVFEARVINLCDRDIATNFGVVVGEVILVDSCACIVIFSCYDCYLYF
Ga0325403_10762553	3300032354	Xylem	VFEAKVINLCDRDIATNFGAVAGEVILVDSCAINFFFAVIVISFS
Ga0325403_10792671	3300032354	Xylem	PCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIF
Ga0325403_11470251	3300032354	Xylem	PCLLYTILCVVFEARVINLCDRDIATNFGAIAGEVILVDSCACNVIFICCD
Ga0325403_11471631	3300032354	Xylem	PCLLYTILCVVFEARVINLCDRDIATNFGAIAGEVILVDSCAYNVIFICCD
Ga0325403_11535831	3300032354	Xylem	VGSTSCSLHTILCVVFDVRVINLYDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFSE
Ga0325403_11563961	3300032354	Xylem	VFDARVINLCDRDIAINFGAVAGEVILVDSCACTVIFSCCD
Ga0325401_10147193	3300032355	Xylem	MGLTPYFLYTILCVVFEARVINLCDRNILINFSVVTGEVILVDSCAIIFIFCDCYLFF
Ga0325401_11002292	3300032355	Xylem	VFEAKVINLCDRDIATNFGAVAGEVILVDSCAINFFFAVIVIAFS
Ga0325401_11882301	3300032355	Xylem	MGSTPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFICCDSKKKK
Ga0325400_12860102	3300032374	Xylem	VFDVRVINLYDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFSE
Ga0325405_10171987	3300032389	Xylem	EVRVINLCDRDIAINFGTVAGEVILVDSCAIIFICYDCYLFF
Ga0325405_10718711	3300032389	Xylem	LNFLVGSTPCLLYTIVCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0325404_10662811	3300032390	Xylem	LYTILCVVFEARVINLCDRDIATNFGAVAEEVILVDSCAIIFFTVIVISFS
Ga0325410_10638144	3300032735	Xylem	TPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIF
Ga0325414_11324801	3300032741	Leaf	VGSTSCSLHTILCVVFEVRVINLYDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFSE
Ga0307507_101418231	3300033179	Ectomycorrhiza	STLCLLYTILCVVFESRVINLCDRDIATNFGAVTGEVILVDSCAIIFICCDCYLFF
Ga0307507_102376081	3300033179	Ectomycorrhiza	PCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFYLL
Ga0307507_102991021	3300033179	Ectomycorrhiza	FLMGSTPCLLYTILCVVFEARVINLCDRDIATNFGVVAGEVILVNSCAIIFICCDYYLFF
Ga0307507_103203881	3300033179	Ectomycorrhiza	LCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFICYDFCFFF
Ga0307507_103843161	3300033179	Ectomycorrhiza	TSTFLVGSTPCLLYTILCVVFEARVINLCDRDIATNFDAVVGEVILVDSFTIIFIFYDCYLFF
Ga0307507_103936232	3300033179	Ectomycorrhiza	CLLYTILCVVFEARVINLCDRDITTNFGAVAGEVILVDSCAIIFICCDCYLFF
Ga0307507_104323541	3300033179	Ectomycorrhiza	PCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAYTVIFICCDCYLFF
Ga0307507_104800771	3300033179	Ectomycorrhiza	VINLCDRDIATNFGAVAGEVILVDSCAIIFICCYCYFFF
Ga0307507_107110441	3300033179	Ectomycorrhiza	VGSTPCLLYTILCVVFEARVINLYDRDIATNFGAIVGEVILVDSCAIIFICCDCYLFFXK
Ga0307510_101626651	3300033180	Ectomycorrhiza	LCVVFEARVINLCDRDIATNFGAVAGEVILVNSCAIIFICCDYYLFF
Ga0307510_101987943	3300033180	Ectomycorrhiza	TPCLLYTILCVVFEARVINLCDRDIEINFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307510_103065033	3300033180	Ectomycorrhiza	CVVLETRVINLSDRDIATNFGAVAGEVILVDSCAIIFICYDCYFFF
Ga0307510_103707081	3300033180	Ectomycorrhiza	VINLCDRDIATNFGAVAGEVILVDSCAIIFICYDCCFFF
Ga0307510_103857631	3300033180	Ectomycorrhiza	KSDLNFLVGSTPCLLYTILCVVFEDRVINLCDRDIATNFGAVAGEVILVDSCAIIFICCDCYFFF
Ga0307510_104565312	3300033180	Ectomycorrhiza	VGSTPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFI
Ga0307510_104907041	3300033180	Ectomycorrhiza	FPVGSTPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFFCCDCYFFF
Ga0307510_106095541	3300033180	Ectomycorrhiza	EARVINLCDRDIAINFGDVAGEVILVDSCAIIFICCDCYFFF
Ga0325419_003107_5507_5641	3300034389	Leaf	MFEARVINLCDRDIATNFGAVAGEVILVDSCAIIFIFCDFYFFF
Ga0325420_086578_1159_1317	3300034688	Leaf	TPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCTCTVIFICCD
Ga0325420_097793_941_1099	3300034688	Leaf	LLYTILCVVFEARVINLCDRDIATNFGAIGWEVILVDSCAIIFICCDCYFFF
Ga0325420_138508_1_147	3300034688	Leaf	TPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCVIIYFL
Ga0325421_089862_953_1087	3300034689	Leaf	LYTILCVVFEARVINLCDRDIATNFGAVAEEVILVDSCAIIFLL
Ga0325423_007298_11203_11355	3300034778	Leaf	LYTILCVVFEARVINLCDRDIATNFGAVAEEVILVDSCAIIFICCDCYFF
Ga0325407_115660_1_177	3300034899	Xylem	NFLVGSTPCLLYTILCVVFEARVINLCDRDIATNFGAVAGEVILVDSCACTVIFICCD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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