Metagenome / Metatranscriptome Family F069978

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Overview

Basic Information
Family ID	F069978
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	98 residues
Representative Sequence	STDRVVVRGRYGISFAHGFAADHQFGVGAEFAKTVALDLMLAREGGYSDGVHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR
Number of Associated Samples	94
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	97.56 %
% of genes from short scaffolds (< 2000 bps)	93.50 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.146 % of family members)
Environment Ontology (ENVO)	Unclassified (41.463 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.50% Coil/Unstructured: 52.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04055	Radical_SAM	47.15
PF13399	LytR_C	6.50
PF01336	tRNA_anti-codon	0.81
PF02569	Pantoate_ligase	0.81
PF00359	PTS_EIIA_2	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	89.43 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	89.43 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	75.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	75.61 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1020664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1152	Open in IMG/M
3300002911\|JGI25390J43892_10138232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300004157\|Ga0062590_100109709	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300005172\|Ga0066683_10436796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300005180\|Ga0066685_10258622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1202	Open in IMG/M
3300005181\|Ga0066678_11123158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300005353\|Ga0070669_101716438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300005468\|Ga0070707_101878266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300005536\|Ga0070697_100397548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1195	Open in IMG/M
3300005552\|Ga0066701_10223442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1160	Open in IMG/M
3300005552\|Ga0066701_10692927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300005555\|Ga0066692_10158768	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005559\|Ga0066700_10982974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300005598\|Ga0066706_10414864	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1072	Open in IMG/M
3300005598\|Ga0066706_10421764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1062	Open in IMG/M
3300005617\|Ga0068859_102142288	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300005876\|Ga0075300_1036214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300006034\|Ga0066656_10029949	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300006034\|Ga0066656_10122427	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300006034\|Ga0066656_10129322	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300006046\|Ga0066652_101644116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300006755\|Ga0079222_10358647	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300006845\|Ga0075421_100726075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1152	Open in IMG/M
3300006904\|Ga0075424_101750161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300006914\|Ga0075436_100846463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	682	Open in IMG/M
3300006914\|Ga0075436_100869033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300007004\|Ga0079218_10724813	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	938	Open in IMG/M
3300007076\|Ga0075435_101035897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300007076\|Ga0075435_101778379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300007255\|Ga0099791_10447396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300009012\|Ga0066710_100163902	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300009038\|Ga0099829_11594702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300009089\|Ga0099828_11052215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	724	Open in IMG/M
3300009137\|Ga0066709_103015433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300009147\|Ga0114129_11216686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	937	Open in IMG/M
3300009597\|Ga0105259_1063966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300010159\|Ga0099796_10270353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300010329\|Ga0134111_10061018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1388	Open in IMG/M
3300010329\|Ga0134111_10213642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300010333\|Ga0134080_10051147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1626	Open in IMG/M
3300010364\|Ga0134066_10016664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1575	Open in IMG/M
3300010364\|Ga0134066_10307839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300011271\|Ga0137393_10923469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	744	Open in IMG/M
3300011271\|Ga0137393_10993205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300011403\|Ga0137313_1003648	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300011430\|Ga0137423_1037416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1468	Open in IMG/M
3300011434\|Ga0137464_1026598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1561	Open in IMG/M
3300012039\|Ga0137421_1019340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1649	Open in IMG/M
3300012189\|Ga0137388_10391663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1285	Open in IMG/M
3300012200\|Ga0137382_11048745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300012203\|Ga0137399_10234006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1502	Open in IMG/M
3300012203\|Ga0137399_10898793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300012203\|Ga0137399_11507171	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300012206\|Ga0137380_11577247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300012208\|Ga0137376_10468465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1093	Open in IMG/M
3300012208\|Ga0137376_10783892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	821	Open in IMG/M
3300012349\|Ga0137387_10230416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1333	Open in IMG/M
3300012351\|Ga0137386_11065509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300012357\|Ga0137384_11597068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300012359\|Ga0137385_10757375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300012361\|Ga0137360_10242461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1477	Open in IMG/M
3300012361\|Ga0137360_10469794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1068	Open in IMG/M
3300012363\|Ga0137390_11111584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300012683\|Ga0137398_10381388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	958	Open in IMG/M
3300012917\|Ga0137395_11198583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300012918\|Ga0137396_10500856	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	900	Open in IMG/M
3300012918\|Ga0137396_10520830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300012918\|Ga0137396_10998475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300012927\|Ga0137416_10391378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1175	Open in IMG/M
3300012927\|Ga0137416_10632488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	935	Open in IMG/M
3300012927\|Ga0137416_10643745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	927	Open in IMG/M
3300012927\|Ga0137416_11019737	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300012944\|Ga0137410_11792741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300012972\|Ga0134077_10258477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	723	Open in IMG/M
3300012976\|Ga0134076_10239714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	771	Open in IMG/M
3300014873\|Ga0180066_1123679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300014879\|Ga0180062_1020320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1360	Open in IMG/M
3300015052\|Ga0137411_1051626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300015052\|Ga0137411_1061123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1009	Open in IMG/M
3300015052\|Ga0137411_1061124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300015052\|Ga0137411_1153430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300015052\|Ga0137411_1170495	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	822	Open in IMG/M
3300015052\|Ga0137411_1274371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300015358\|Ga0134089_10299011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300015359\|Ga0134085_10074786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1382	Open in IMG/M
3300015359\|Ga0134085_10241369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300017654\|Ga0134069_1233412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	636	Open in IMG/M
3300017654\|Ga0134069_1245183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300017656\|Ga0134112_10118679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1003	Open in IMG/M
3300017659\|Ga0134083_10145123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	958	Open in IMG/M
3300018054\|Ga0184621_10012797	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300018056\|Ga0184623_10185040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300018071\|Ga0184618_10100698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1132	Open in IMG/M
3300018431\|Ga0066655_11396320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300018482\|Ga0066669_10511365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1041	Open in IMG/M
3300019877\|Ga0193722_1013489	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300019882\|Ga0193713_1010937	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300022195\|Ga0222625_1321845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300024325\|Ga0247678_1032490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	820	Open in IMG/M
3300025922\|Ga0207646_11331072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300026324\|Ga0209470_1038649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2378	Open in IMG/M
3300026324\|Ga0209470_1075615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1555	Open in IMG/M
3300026324\|Ga0209470_1080912	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300026536\|Ga0209058_1297423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300026537\|Ga0209157_1069156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1778	Open in IMG/M
3300026537\|Ga0209157_1361532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300026547\|Ga0209156_10235238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	859	Open in IMG/M
3300026548\|Ga0209161_10255650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	905	Open in IMG/M
3300026551\|Ga0209648_10644530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300027266\|Ga0209215_1005424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1470	Open in IMG/M
3300027643\|Ga0209076_1018178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1891	Open in IMG/M
3300027671\|Ga0209588_1018082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2192	Open in IMG/M
3300027671\|Ga0209588_1029490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1750	Open in IMG/M
3300027875\|Ga0209283_10648726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300028293\|Ga0247662_1065109	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300028380\|Ga0268265_10696768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	981	Open in IMG/M
3300028536\|Ga0137415_10338387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1308	Open in IMG/M
3300028811\|Ga0307292_10454598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300031199\|Ga0307495_10081693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300031226\|Ga0307497_10091762	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1165	Open in IMG/M
3300031740\|Ga0307468_100982496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300031854\|Ga0310904_11323079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	522	Open in IMG/M
3300033417\|Ga0214471_11464941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.87%
Host-Associated	Host-Associated	8.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.93%
Aquatic	Environmental → Aquatic	8.94%
Plants	Host-Associated → Plants	8.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.93%
Sediment	Environmental → Aquatic → Sediment	8.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.63%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.69%
Loam	Environmental → Terrestrial → Soil → Loam	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.06%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10206641	3300002557	Grasslands Soil	GAELARKVSLDLMVVREGGYSSGAGWRPVAGLGLTIGKYRVTLARDAGVNDVGSAYRVGVEAGFK*
JGI25390J43892_101382322	3300002911	Grasslands Soil	GAELVRKVSFDLMVAREGGYSSGASWRPVAGLGLMIGKYRVTLARDTGVNEVGSAYRVGVEATFK*
Ga0062590_1001097091	3300004157	Soil	GVEARIWAGPVSERGDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGVARDGGVSDLGSAYRVGVEARFK*
Ga0066683_104367962	3300005172	Soil	AQDVYAGVEGRVWSGAMAKNPVVVRARYGISFAHGFTADHQFGAGVEFARIVAFDLMGVREGSYGPASTRVVGGLRIVIGKYRITLARDAGVNDLGSAYRVGVDIKFR*
Ga0066685_102586222	3300005180	Soil	MSGNRVVVLGRYGISFAHGFTADHQFGLGAEFAKTIGLDLMLVREGSYGQAHSWRPVGGLRIAIGKYRVTIARDAGVNDLGSAYRVGVDMRFR*
Ga0066678_111231581	3300005181	Soil	VRGRYGISFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGVHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0070669_1017164381	3300005353	Switchgrass Rhizosphere	GPVSERGDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGLARDGGVSDLGSAYRVGVEARFK*
Ga0070707_1018782661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AHGFAADHQFGLGAEVAKIAAFDLMLSREGGYSDGTHLRPVAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0070697_1003975482	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EGRIWSGAFSNDRVVVRGRYGISFAHGFPADHQFGAGAEFSKTVALDLMLAREGAYGDRGASWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGVDARFR*
Ga0066701_102234422	3300005552	Soil	FFSSLKANDPAQDIFAGIEGRIWSGALSGDRVVVRGRYGISFAHGFPADHQFGAGAEFSKTVALDLMLAREGAYGDRGANWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGVDARFR
Ga0066701_106929271	3300005552	Soil	QDVYAGIEGRIWSGPLSGDRVVVRGRYGISFAHGFAADHQFGAGAEFAKTVALDLMLAREGGYGNSVRWRPVAGLRVAIGKYRITLARDAGVNDLGSAYRVGVDARFR*
Ga0066692_101587681	3300005555	Soil	GFAVDHQFGVGAEFAKTVALDLMLAREGGYSEGHHLRPVAGVWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR*
Ga0066700_109829741	3300005559	Soil	IWQGAVSAARDRVVIRGRYGLAFGHGFTADHQLGLGAELARKVSFDLMVAREGGYSSGAGWRPVAGLGLAIGKYRVTLARDAGVNDVGSAYRVGVEAGFK*
Ga0066706_104148641	3300005598	Soil	VVRGRYGLAFGHGFAADHQLGVGAELVRKVSFDLMVAREGGYSSGAGWRPVAGLGLTIGKYRVTLARDTGVNEVGSAYRVGVEATFK*
Ga0066706_104217642	3300005598	Soil	KTNDPSQDVYAGIEGRIWRGPLASDRVVVRGRYGISFAHGFAVDHQFGVGAEFAKTVALDLMLAREGGYSEGHHLRPVAGLWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR*
Ga0068859_1021422881	3300005617	Switchgrass Rhizosphere	GDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGVARDGGVSDLGSAYRVGVEARFK*
Ga0075300_10362141	3300005876	Rice Paddy Soil	SGAMSGTRVVVRGRYGISFAHGFTADHHFGAGAEFGKTAALDLLLAHEGSYGPGSWRPVGGLRLMIGKYRITLARDAGVNDLGSSYRVGVDMRFK*
Ga0066656_100299495	3300006034	Soil	ADHQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0066656_101224271	3300006034	Soil	DDPAQDVYAGVEGRVWSGAMAKNPVVVRARYGISFAHGFTADHQFGAGVEFAKIVAFDLMGVREGSYGPASTRVVGGLRMVIGKYRITLARDAGVNDLGSAYRVGVDIRFR*
Ga0066656_101293223	3300006034	Soil	YAGIEGRIWSGPLSGDRVVVRGRYGISFAHGFAADHQFGAGAEFAKTVALDLMLAREGGYGNGVSWRPVAGLRVAIGKYRITLARDAGVNDLGSAYRVGVDARFR*
Ga0066652_1016441162	3300006046	Soil	QDVYAGIEGRVWSGTMGRGNNRVVVRGRYGMSFAHGFAADHQFGLGADFAKTLGLDLMVVREGSYSNAVNWRPAGALRIAIGKYRVTLARDGGVSDLGSSYRVGVEMRFR*
Ga0079222_103586472	3300006755	Agricultural Soil	FRTNDPAQDVLAGIEGRLWSRSLSGDRLVVRGRYGMAFAHGFPADQQIGLGGELTKTGSVDIMLARDGGYGEKGSSWRAVVGLRVIIGKYRVTVARDAGVNDLGSAYRVGVDMRFK*
Ga0075421_1007260751	3300006845	Populus Rhizosphere	ATHFFSSLTANDPAQDVYAGVEARIWQGPVSEGGDRVVIRGRYGISFAHGFTADHQLGVGAEFSKIVAFDLLFAREGGYGEGSWRPVAGLGLNIGKYRIAVARDGGVNELGSAYRVGVEARFK*
Ga0075424_1017501611	3300006904	Populus Rhizosphere	EARIWQGPVSSNRVVVRGRYGISFAHGFAADHQFGLGAEVAKIAAFDLMLSREGGYSDGTHLRPVAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0075436_1008464631	3300006914	Populus Rhizosphere	KNRVVVRGRYGISFAHGFPADHQFGFGADFAKTLGLDFMVVREESYGHAVNWRPSGALRIAVGKYRVTLARDGGVSDLGSSYRVGVEMRFR*
Ga0075436_1008690332	3300006914	Populus Rhizosphere	QDIFAGIEGRIWSGAFSNDRVVVRGRYGISFGHGFPADHQFGAGAEFAKTVALDLMLAREGAYGDRGASWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGMDARLR*
Ga0079218_107248132	3300007004	Agricultural Soil	YGISFAHGFTADHQVGAGAEFSKIVTFDLLFVREGGYSEGSWRAVAGLGLNIGKYRIAVARDAGVNELGSAYRVGVEARFK*
Ga0075435_1010358971	3300007076	Populus Rhizosphere	TDPAQDMYAGIEARIWQGPVSSNRVVVRGRYGISFAHGFAADHQFGLGAEVAKIAAFDLMLSREGGYSDGTHLRPVAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0075435_1017783791	3300007076	Populus Rhizosphere	HGFTADHQFGAGAEFGKIVAFDLMLAREGSYGSGGASWRPVAGVRIAIGKYRITLTRDTGVNDLGSAYRVGMDARFR*
Ga0099791_104473962	3300007255	Vadose Zone Soil	FFSSLNTNDPAQDIYAGIEGRIWKGPLSTDRVVVRGRYGIAFAHGFGADHQFGLGAEFAKTVALDLMLAREGGYTDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDIRFR*
Ga0066710_1001639025	3300009012	Grasslands Soil	TNDPAQDMYAGIEARIWRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0099829_115947021	3300009038	Vadose Zone Soil	LKFNDPAHDLYAGIEARLWQGSVSGGRDRVVVRGRYGLAFGHGFPADHQLGVGAELVRKVSFDLMVGREGGYSSGAGWRPVAGLGLTVGKYRVTLARDTGVNEVGSAYRVGVEATFK*
Ga0099828_110522152	3300009089	Vadose Zone Soil	GIEGRIWSGAFSNDRVVVRGRYGISFAPGFPADHQFGAGAEFSKTVALDLMLAREGAYGDRGASWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGVDARFR*
Ga0066709_1030154332	3300009137	Grasslands Soil	ATHFFSSLESNDPSQDIYAGIEGRIWSGPLSGDRVVVRGRYGISFAHGFTADHQFGAGAEFSKTLALDLMLAREGGYGNRGVSWRPVAGVRIAIGKYRITLARDAGVNDLGSAYRVGVDARFR*
Ga0114129_112166861	3300009147	Populus Rhizosphere	SLTANDPAQDVYAGVEARIWQGPVSAGGDRVVIRGRYGISFAHEFTADHQLGVGAEFSKIVTVDVLFAKEGGYGEGSWRPVAGLGLNIGKYRIAVARDAGVNELGSAYRVGVEARFK*
Ga0105259_10639661	3300009597	Soil	RGDRVVVRGRYGISFAHGFAADHQLGIGAEFSQTVTFDLLFAREGGYSGGSWRPVAGLGLAIGKYRVAIARDAGVNDLGSAYRVGVEVRFK*
Ga0099796_102703532	3300010159	Vadose Zone Soil	EFGADHQLGVGAEVAKTVALDLMLAREGGYSDGTHWGPVGGLRLVIGKYRVTLARDAGVNDLGSSYRVGVDMRFK*
Ga0134111_100610182	3300010329	Grasslands Soil	DMYAGIEARIWRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0134111_102136421	3300010329	Grasslands Soil	TVIRGRYGISFGHGFTAYHQFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR*
Ga0134080_100511473	3300010333	Grasslands Soil	GISVGHGFTADHQLGLGAELSKAFAFDAMLGREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR*
Ga0134066_100166642	3300010364	Grasslands Soil	ATHFFSSLKTDDPAQDVYAGVEGRVWSGAMAKNSVVVRARYGISFAHGFTADHQFGAGVEFARIVAFDLMGVREGSYGPASTRVVGGLRIVIGKYRITLARDAGVNDLGSAYRVGVDIKFR*
Ga0134066_103078392	3300010364	Grasslands Soil	ADHQFGAGAEVGKTAALDLMLAHEGSYGPGSWRPVGGLRLTIGKYRLTLARDAGVNDLGSSYRVGVDMRFK*
Ga0137393_109234691	3300011271	Vadose Zone Soil	GISFAHGFAVDHQFGVGAEFAKTVALDLMLAREGGYSEGHHLRPVAGLWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR*
Ga0137393_109932052	3300011271	Vadose Zone Soil	GAGAEFSKTVALDLMLAREGAYGDRGASWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGVDARFR*
Ga0137313_10036481	3300011403	Soil	GRYGISFAHGFTADHQLGAGAEFSKVVTFDLLFAKEGGYSEGSWRPVAGLGLNVGKYRIAVARDAGVNELGSAYRVGVEARFK*
Ga0137423_10374163	3300011430	Soil	VVVRGRYGISFAHGFTADHQLGIGAEFSKTVTFDLLFAKEGGYGAGSWRPVAGLGLAVGKYRVAIARDAGVNDLGSAYRVGVEVRFK*
Ga0137464_10265983	3300011434	Soil	VRGRYGISFAHGFAADHQLGIGAEFSQTVTFDLLFAREGGYSGGSWRPVAGLGLAIGKYRVAIARDAGVNDLGSAYRVGVEVRFK*
Ga0137421_10193403	3300012039	Soil	LNEPAQDIYAGLEARLWNGPASDRGDRVVVRGRYGISFAHGFAADHQLGIGAEFSQTVTFDLLFAREGGYSGGSWRPVAGLGLAIGKYRVAIARDAGVNDLGSAYRVGVEVRFK*
Ga0137388_103916632	3300012189	Vadose Zone Soil	ATHFFSSLRTNDPAQDIYAGIEGRIWKGPLSTDRVVVRARYGISFAHGFGADHQFGLGAEVAKTVALDLMLAREGGYSDGAQWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDMRFR*
Ga0137382_110487452	3300012200	Vadose Zone Soil	YGISFAHGFAADHQFGVGAEVAKTVALDLVLSREGGYSDGTHLRPVAGLWLAIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0137399_102340061	3300012203	Vadose Zone Soil	LSTDRVVVRGRYGISFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGTHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0137399_108987932	3300012203	Vadose Zone Soil	DHQFGVGAEVAKTVALDLMLAREGGYSAGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDMRFR*
Ga0137399_115071711	3300012203	Vadose Zone Soil	WRSPGTRNNTVIRARYGISFGHGFTADHQFGLGAELAKAFAFDAMLVREGSYGNGAGWRPVAGLRLAVGKYRVTLTRDGGVNDLGSAYRVGVDVRFR*
Ga0137380_115772472	3300012206	Vadose Zone Soil	FSSLKTNDPSQDVYAGIEARLWKSPGTRNNTVIRGRYGISFGHGFTADHQFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSAYRVGVDVRFR*
Ga0137376_104684652	3300012208	Vadose Zone Soil	STDRVVVRGRYGISFAHGFAADHQFGVGAEFAKTVALDLMLAREGGYSDGVHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0137376_107838921	3300012208	Vadose Zone Soil	QLAGDRLRVASATHFFSSLQTNDPAQDVYAGIEARVWSGAMSGNRVIVRGRYGVSCAHGFAADHQFGLGAEFAKTIGLDLMLAREGSYGQGHSWRPVGGLRIAIGKYRVTLARDAGVNDLGSAYRVGVDMRFR*
Ga0137387_102304161	3300012349	Vadose Zone Soil	AGVEGRVWSGPMSGNRVVVLGRYGISFAHGFTADHQFGLGAEFAKTIGLDLMLVREGSYGQAHSWRPVGGLRIAIGKYRVTIARDAGVNDLGSAYRVGVDMRFR*
Ga0137386_110655092	3300012351	Vadose Zone Soil	FGVGAEFAKTVALDLMLAREGGYSDGVHWRPVAGLRLVIGKYRVTLARDAGINGLGSAYRVGVDIRFR*
Ga0137384_115970681	3300012357	Vadose Zone Soil	NNTVIRGRYGISFGHGFTADHHFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSAYRVGVDVRFR*
Ga0137385_107573752	3300012359	Vadose Zone Soil	SSLKTNDPAQDVYAGIEGRVWSGTMGRGSNRVVVRGRYGMSFAHGFAADHQFGLGADFAKTLGLDLMVVREGSYSNAVNWRPAGALRIAIGKYRVTLARDGGVSDLGSSYRVGVEMRFR*
Ga0137360_102424612	3300012361	Vadose Zone Soil	SLRTNDPAQDIYAGVEGRIWQGPVSQNRVVVRGRYGISFAHGFGADHQFGMGAEFAKTVALDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDMRFR*
Ga0137360_104697942	3300012361	Vadose Zone Soil	RLAAATDFFGSRRVDDPAQDLYGGIAVRNWKGPLSTDRVVVRGRYGISFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGTHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0137390_111115842	3300012363	Vadose Zone Soil	GLGAEFAKTVALDLMLAREGGYTDGVHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDIRFR*
Ga0137398_103813881	3300012683	Vadose Zone Soil	ARIWQGPVSSNRVVVRGRYGISFGHGFAADHQFGLGAEVAKIVALDLMLSREGGYSDGTHLRPVAGLRLVIGKYRITLARDAGVNDLGSTYRVGVDMRFR*
Ga0137395_111985832	3300012917	Vadose Zone Soil	VWSGTMGRGNNRVVVRGRYGMSFAHGFAADHQFGLGADFAKTLGFDLMVVREGSYGNAVNWRPAGALRIAIGKYRVTLARDGGVSDLGSSYRVGVEMRFR*
Ga0137396_105008562	3300012918	Vadose Zone Soil	KTNDPAQDVYAGIEGRIWRGPLASDRVVVRGRYGISFAHGFAVDHQFGVGAEFAKTVALDLMLAREGGYSEGHHLRPVAGLWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR*
Ga0137396_105208302	3300012918	Vadose Zone Soil	SSLKTNDPAQDVYAGIEGRVWSGPMGGGGANNRVVVRARYGISFAHDFAADHQFGVGADFAKTLGVDFMMVREGSYGNAVNWRPAGGLRIAIGKYRVTLARDGGVSDVGSSYRVGVEMRFR*
Ga0137396_109984751	3300012918	Vadose Zone Soil	SDPSQDVYAGVEARVWRSPGTRNNTVIRARYGISFGHGFTADHQFGLGAELAKAFAFDAMLVREGSYGNGAGWRPVAGLRLAVGKYRVTLTRDGGVNDLGSAYRVGVDVRFR*
Ga0137416_103913781	3300012927	Vadose Zone Soil	DNRVVILGRYGISFGHGFGPDHQFGVGAEVAKTVGLDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGLEMRFR*
Ga0137416_106324882	3300012927	Vadose Zone Soil	GVGAEFAKTVALDLMLAREGGYSDGTHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0137416_106437451	3300012927	Vadose Zone Soil	VDHQFGVGAEFAKTVALDLMLAREGGYSEGHLLRPVAGLWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR*
Ga0137416_110197372	3300012927	Vadose Zone Soil	LKTTDPSQDVYAGVEARVWRSPGTRNNTVIRARYGISFGHGFTADHQFGLGAELAKAFAFDAMLVREGSYGNGAGWRPVAGLRLAVGKYRVTLTRDGGVNDLGSAYRVGVDVRFR*
Ga0137410_117927412	3300012944	Vadose Zone Soil	YGISFGHGFGPDHQFGVGAEVAKTVGLDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0134077_102584772	3300012972	Grasslands Soil	RIWKGPLSTDRVIVRARYGVSFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDMRFR*
Ga0134076_102397142	3300012976	Grasslands Soil	SGPLSGDRVVVRGRYGISFAHGFAADHQFGAGAEFAKTVALDLMLAREGGYGNGVRWRPVAGLRVAIGKYRITLARDAGVNDLGSAYRVGVDARFR*
Ga0180066_11236791	3300014873	Soil	RYGISFGHGFSADHQFGIGAEIASTIAFDLMLAREGSYGGGGGTWRPAAGLRLVIGKYRVTLARDTGVNDLGSAYRVGVDVRFR*
Ga0180062_10203201	3300014879	Soil	EARLWNGPASDRGDRVVVRGRYGISFAHGFAADHQLGIGAEFSQTVTFDLLFAREGGYSGGSWRPVAGLGLAIGKYRVAIARDAGVNDLGSAYRVGVEVRFK*
Ga0137411_10516262	3300015052	Vadose Zone Soil	AEVAKIVALDLMLSREGGYSDGAHLRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0137411_10611232	3300015052	Vadose Zone Soil	GFAADHQFGVGAEVAKIVALDLMLSREGGYSDGAHLRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0137411_10611241	3300015052	Vadose Zone Soil	DSRPTIQFGVGAEVAKIVALDLMLSREGGYSDGAHLRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0137411_11534302	3300015052	Vadose Zone Soil	GVGAEVAKTVGLDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR*
Ga0137411_11704952	3300015052	Vadose Zone Soil	SLRTNDPAQDMYAGIEARIWRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKIVALDLMLSREGGYSDGAHLRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0137411_12743712	3300015052	Vadose Zone Soil	RTNDPAQDMYAGIEARIWRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKIVALDLMLSREGGYSDGAHLRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR*
Ga0134089_102990111	3300015358	Grasslands Soil	IWKGPLSTDRAVVRARYGVSFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRDGVEMRFR*
Ga0134085_100747862	3300015359	Grasslands Soil	FSSLKFNDPAHDLYAGIEARLWRGSVSGGRDRVVVRGRYGLAFGHGFAADHQLGVGAELVRKVSFDLMVAREGGYSSGASWRPVAGLGLMIGKYRVILARDTGVNEVGSAYRVGVEATFK
Ga0134085_102413692	3300015359	Grasslands Soil	RGRYGISFGHGFTADHQFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR*
Ga0134069_12334121	3300017654	Grasslands Soil	PSQDIYAGIEGRIWSGPLSGDRVVVRGRYGISFAHGFTADHQFGAGAEFSKTLALDLMLAREGGYGNRGVSWRPVAGVRIAIGKYRIILARDAGVNDLGSAYRVGVDARFR
Ga0134069_12451832	3300017654	Grasslands Soil	SGGRDRVVVRGRYGLAFRHGFAADHQLGVGAELVRKVSFDLMVAREGGYSSGASWRPVAGLGLMIGKYRVILARDTGVNEVGSAYRVGVEATFK
Ga0134112_101186791	3300017656	Grasslands Soil	DIYAGIEGRIWKGPLSTDRVIVRARYGVSFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGAHLRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVDMRFR
Ga0134083_101451231	3300017659	Grasslands Soil	VVRGRYGISFAHGFTADHQFGAGAEFSKTVALDLMLAREGSYGDRVSWRPVAGLRIAIGKYRITLARDAGVNDLGSAYRVGVDARFR
Ga0184621_100127971	3300018054	Groundwater Sediment	IYAGLEGRIWQGPVSRNRVVVRGRYGISFAHGFGVDHQLGVGAEVAKTVAFDLMVSREGYSDGTHWRPAAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0184623_101850401	3300018056	Groundwater Sediment	THFFSSLKTNDPAQDVYAGVEARLWNGAVSARGDRAVVRGRYGISFAHGFTADHQFGLGAELSKILGLDVMVAREGGYGNGGAGWRPVAGLRVAIGKYRITVARDAGVNELGSAYRVGVEARIR
Ga0184618_101006982	3300018071	Groundwater Sediment	GADHQLGVGAEVAKTVAFDLMVSREGGYSDGTHWRPAAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0066655_113963202	3300018431	Grasslands Soil	VGLGAGRPVAGDRLRIAAGTRFFSSLKTNDPSQDVYAGIEARLWKSPGTSNNTVIRGRYGISFGHGFTADHQFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR
Ga0066669_105113652	3300018482	Grasslands Soil	GVGAEVAKTVALDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR
Ga0193722_10134892	3300019877	Soil	MGGGVGNNRVVVRGRYGISFAHGFAADHQFGLGADFAKTIGLDLMVVREGSYGTAVNWRPVGGLRIAIGKYRVTLARDGGVSDLGSSYRVGVEMRFR
Ga0193713_10109375	3300019882	Soil	YGISFAHGFGADHQFGVGAEFAKTVALDLMLAREGGYSDGVHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGVEMRFR
Ga0222625_13218452	3300022195	Groundwater Sediment	IWQGPVSRNRVVVRGRYGIAFAHGFGADHQLGVGAEVAKTVAFDLMVSREGGYSDGTHWRPAAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0247678_10324901	3300024325	Soil	DVFAGVEARIWAGPVSERGDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGVARDGGVSDLGSAYRVGVEARFK
Ga0207646_113310721	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AHGFAADHQFGLGAEVAKIAAFDLMLSREGGYSDGTHLRPVAGLRLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0209470_10386495	3300026324	Soil	KTDDPAQDVYAGVEGRVWNGAMARNPVVVRARYGISFAHGFTADHQFGVGVEFAKIVAFDLMGVREGGYGPASTRVVGGLRIVIGKYRITLARDAGVNDLGSAYRVGVDIKFR
Ga0209470_10756151	3300026324	Soil	SQDVYAGIEARLWKSPGTSNNTVIRGRYGISFGHGFTADHQLGLGAELSKAFAFDAMLVREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR
Ga0209470_10809122	3300026324	Soil	MYAGIEARIWRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0209058_12974232	3300026536	Soil	HQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0209157_10691561	3300026537	Soil	QFGLGAELSKAFAFDAMLAREGSYGNGAGWRPVAGLRLAVGKYRITLTRDAGVNDLGSTYRVGVDVRFR
Ga0209157_13615321	3300026537	Soil	HFFSSLKTNDPAQDMYAGIEARILRGPVSSNRVVVRGRYGISFAHGFAADHQFGVGAEVAKTVALDLMLSREGGYSDGAHWRPVAGLWLVIGKYRVTLARDAGVNDLGSTYRVGVDMRFR
Ga0209156_102352382	3300026547	Soil	GRYGMSFAHGFTADHQFGAGAEVGKTAALDLMLAHEGSYGPGSWRPVGGLRLTIGKYRLTLARDAGVNDLGSSYRVGVDMRFK
Ga0209161_102556502	3300026548	Soil	ATHFFSSLESNDPSQDIYAGIEGRIWSGPLSGDRVVVRGRYGISFAHGFTADHQFGAGAEFSKTLALDLMLAREGGYGNRGVSWRPVAGVRIAIGKYRITLARDAGVNDLGSAYRVGVDARFR
Ga0209648_106445302	3300026551	Grasslands Soil	TADHQLGVGAELVRKVSFDLMVAREGGYSSGVGWRPVAGLGLTVGKYRVTLARDTGVNEVGSAYRVGVEASFK
Ga0209215_10054241	3300027266	Forest Soil	AWGGDRIRVAAATHFFSSLTADDPAQDVYAGLEARIWQGPVSDGGDRVVVRGRYGIAFAHGFTADHQLGLGAEFSKIVAFDLLLAREGGYSEGSWRAVAGLGLSIGKYRIAVARDAGVNELGSAYRVGVEARFK
Ga0209076_10181781	3300027643	Vadose Zone Soil	YGISFGHGFTADHQFGLGAELAKAFAFDAMLVREGSYGNGAGWRPVAGLRLAVGKYRVTLTRDGGVNDLGSAYRVGVEVRFR
Ga0209588_10180821	3300027671	Vadose Zone Soil	FAHGFAVDHQFGVGAEFAKTVALDLMLAREGGYSEGHHLRPVAGLWLVIGKYRITLARDAGINDLGSAYRVGVDMRFR
Ga0209588_10294901	3300027671	Vadose Zone Soil	GIEARLWQGSVSDGRDRVVVRGRYGLAFGHGFPADHQLGVGAELVRKVSFDLMVAREGGYSSGAGWRPVAGLGLTVGKYRVTLARDTGVNEVGSAYRVGVEATFK
Ga0209283_106487262	3300027875	Vadose Zone Soil	NDRVVVRGRYGISFAHGFPADHQFGAGAEFSKTVALDLMLAREGAYGDRGASWRPVAGVRIVIGKYRITLARDTGVNDLGSAYRVGVDARFR
Ga0247662_10651093	3300028293	Soil	RYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGVARDGGVSDLGSAYRVGVEARFK
Ga0268265_106967681	3300028380	Switchgrass Rhizosphere	AGVEARIWAGPVSERGDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGLARDGGVSDLGSAYRVGVEARFK
Ga0137415_103383872	3300028536	Vadose Zone Soil	MYAGIEGRIWKGPLSSGRVIVRGRYGISFAHGFGADHQFGVGAEVAKIVALDLMLAREGGYSDGAHWRPVAGLRLVIGKYRVTLARDTGVNDLGSTYRVGLEMRFR
Ga0307292_104545982	3300028811	Soil	PAQDIYAGIEGRIWRGPVSSNRVVVRGRYGIAFGHGFGADHQLGAGVEVAKTVAFDLMLSREGGYSDGAHWRPVAGLWLLIGKYRVALARDAGVNDLGSSYRVGVDMRFR
Ga0307495_100816931	3300031199	Soil	VVRARYGISFAHGFTADHQFGAGVEFAKIVAFDLMGVREGSYGPASTRVVGGLRIVIGKYRITLARDAGVNDLGSAYRVGVDIKFR
Ga0307497_100917622	3300031226	Soil	FFSSLTANDPAQDVYAGVEARLWQGLVSDGGDRVVIRGRYGISFAHGFTADHQLGLGAEFSKIVTLDLLFAREGGYGEGSWRPVGGLGLNIGKYRIAVARDGGVNELGSAYRVGVEARFK
Ga0307468_1009824961	3300031740	Hardwood Forest Soil	DHQFGLGAEIKKTLAFDLMLAREGSYGSGAGWRPVAGLRLSIGKYRITLARDAGVNDLGSAYRVGVDARFK
Ga0310904_113230791	3300031854	Soil	RSFAGDRFRIAAATHFFSSFTANDPAQDVFAGVEARIWTGPVSERGDRTVIRGRYGISFAHGFTADHQLGVGAELSKIVNIDVLFAHEGGYSGGSWRPVVGLGLAIGKYRIGLARDGGVSDLGSAYRVGVEARFK
Ga0214471_114649411	3300033417	Soil	RAFGGDRFRVAAATHFFSSLKTNDPAQDVYAGVEARIWQSAVSPKDNHTVLRGRYGISFAHGFTADHQFGLGAEFSRVVALDFMVAREGSYGDGASWRPVGGLRLAIGKYRVTVARDAGINELGSAYRVGVEARFK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069978

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences