NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F070231

Metagenome Family F070231

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F070231
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 79 residues
Representative Sequence MADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Number of Associated Samples 103
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.69 %
% of genes near scaffold ends (potentially truncated) 37.40 %
% of genes from short scaffolds (< 2000 bps) 78.86 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.675 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.569 % of family members)
Environment Ontology (ENVO) Unclassified
(35.772 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.89%    β-sheet: 31.48%    Coil/Unstructured: 54.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.74
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.297.1.1: WGR domaind2cr9a12cr90.62335
b.29.1.0: automated matchesd5jowa25jow0.60652
d.17.1.0: automated matchesd5zc1a_5zc10.60566
b.69.4.1: WD40-repeatd7m3xa_7m3x0.59844
b.69.12.1: Sema domaind6wvzm16wvz0.59651


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13620CarboxypepD_reg 36.59
PF03734YkuD 17.89
PF01145Band_7 9.76
PF13263PHP_C 3.25
PF00585Thr_dehydrat_C 1.63
PF00496SBP_bac_5 1.63
PF08734GYD 1.63
PF00583Acetyltransf_1 0.81
PF04140ICMT 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 17.89
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 17.89
COG1171Threonine deaminaseAmino acid transport and metabolism [E] 1.63
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 1.63


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.67 %
UnclassifiedrootN/A20.33 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101523797All Organisms → cellular organisms → Bacteria → Acidobacteria1754Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101526397All Organisms → cellular organisms → Bacteria → Acidobacteria2023Open in IMG/M
3300001139|JGI10220J13317_10382985All Organisms → cellular organisms → Bacteria → Acidobacteria996Open in IMG/M
3300001431|F14TB_102736120All Organisms → cellular organisms → Bacteria → Acidobacteria1155Open in IMG/M
3300003267|soilL1_10108686All Organisms → cellular organisms → Bacteria1772Open in IMG/M
3300003319|soilL2_10039160All Organisms → cellular organisms → Bacteria → Proteobacteria8054Open in IMG/M
3300003321|soilH1_10315814All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1143Open in IMG/M
3300003324|soilH2_10061037All Organisms → cellular organisms → Bacteria8727Open in IMG/M
3300003995|Ga0055438_10139621All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300004114|Ga0062593_100106363All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1997Open in IMG/M
3300004114|Ga0062593_100149149All Organisms → cellular organisms → Bacteria → Acidobacteria1770Open in IMG/M
3300004114|Ga0062593_100236725All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1494Open in IMG/M
3300004156|Ga0062589_100232326All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1365Open in IMG/M
3300004480|Ga0062592_101294194All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300005093|Ga0062594_100575221All Organisms → cellular organisms → Bacteria → Acidobacteria979Open in IMG/M
3300005289|Ga0065704_10003414All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia6159Open in IMG/M
3300005289|Ga0065704_10487940All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300005293|Ga0065715_10091694All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter5612Open in IMG/M
3300005294|Ga0065705_10478538All Organisms → cellular organisms → Bacteria → Acidobacteria798Open in IMG/M
3300005294|Ga0065705_10760426All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300005295|Ga0065707_10900427Not Available567Open in IMG/M
3300005331|Ga0070670_100371544All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1259Open in IMG/M
3300005332|Ga0066388_100279672All Organisms → cellular organisms → Bacteria2312Open in IMG/M
3300005332|Ga0066388_101014063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1392Open in IMG/M
3300005333|Ga0070677_10147722All Organisms → cellular organisms → Bacteria → Acidobacteria1091Open in IMG/M
3300005336|Ga0070680_101467011All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300005340|Ga0070689_101114883All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300005344|Ga0070661_101077073Not Available669Open in IMG/M
3300005355|Ga0070671_100018057All Organisms → cellular organisms → Bacteria5724Open in IMG/M
3300005364|Ga0070673_100191145All Organisms → cellular organisms → Bacteria1758Open in IMG/M
3300005365|Ga0070688_100134369All Organisms → cellular organisms → Bacteria → Acidobacteria1673Open in IMG/M
3300005365|Ga0070688_100489653All Organisms → cellular organisms → Bacteria → Acidobacteria926Open in IMG/M
3300005440|Ga0070705_100585403All Organisms → cellular organisms → Bacteria → Acidobacteria861Open in IMG/M
3300005444|Ga0070694_100526267All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300005444|Ga0070694_101227046All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300005456|Ga0070678_100388689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1209Open in IMG/M
3300005456|Ga0070678_101378511All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005543|Ga0070672_100078061All Organisms → cellular organisms → Bacteria2649Open in IMG/M
3300005544|Ga0070686_100402023All Organisms → cellular organisms → Bacteria → Acidobacteria1042Open in IMG/M
3300005545|Ga0070695_100821238All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300005564|Ga0070664_100786885All Organisms → cellular organisms → Bacteria → Acidobacteria889Open in IMG/M
3300005564|Ga0070664_101253663Not Available700Open in IMG/M
3300005577|Ga0068857_101756968All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300005577|Ga0068857_102106632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300005718|Ga0068866_11346384Not Available520Open in IMG/M
3300005764|Ga0066903_108053365Not Available540Open in IMG/M
3300005841|Ga0068863_100032869All Organisms → cellular organisms → Bacteria4942Open in IMG/M
3300005843|Ga0068860_100908564All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300006046|Ga0066652_101121146All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300006049|Ga0075417_10311620All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300006049|Ga0075417_10673516Not Available530Open in IMG/M
3300006237|Ga0097621_101431866Not Available655Open in IMG/M
3300006844|Ga0075428_100001473All Organisms → cellular organisms → Bacteria25177Open in IMG/M
3300006852|Ga0075433_10017810All Organisms → cellular organisms → Bacteria5893Open in IMG/M
3300006852|Ga0075433_11438692Not Available596Open in IMG/M
3300006904|Ga0075424_102415706Not Available551Open in IMG/M
3300006969|Ga0075419_11435984Not Available516Open in IMG/M
3300009094|Ga0111539_10655887All Organisms → cellular organisms → Bacteria → Acidobacteria1222Open in IMG/M
3300009094|Ga0111539_11388481Not Available815Open in IMG/M
3300009098|Ga0105245_10206211All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300009100|Ga0075418_10087242All Organisms → cellular organisms → Bacteria → Acidobacteria3317Open in IMG/M
3300009100|Ga0075418_11139124Not Available845Open in IMG/M
3300009147|Ga0114129_10090312All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4247Open in IMG/M
3300009148|Ga0105243_12104818Not Available600Open in IMG/M
3300009156|Ga0111538_11432156All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300010043|Ga0126380_11513862All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300010047|Ga0126382_10378736All Organisms → cellular organisms → Bacteria → Acidobacteria1096Open in IMG/M
3300010047|Ga0126382_10705714All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300010359|Ga0126376_11221924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300010359|Ga0126376_11256892All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300010360|Ga0126372_10038259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3110Open in IMG/M
3300010360|Ga0126372_10274836All Organisms → cellular organisms → Bacteria → Acidobacteria1463Open in IMG/M
3300010362|Ga0126377_10080000All Organisms → cellular organisms → Bacteria → Acidobacteria2932Open in IMG/M
3300010362|Ga0126377_10208564All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300010366|Ga0126379_10569242All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300010375|Ga0105239_13606692Not Available503Open in IMG/M
3300010399|Ga0134127_10002355All Organisms → cellular organisms → Bacteria → Proteobacteria13667Open in IMG/M
3300010403|Ga0134123_12571253Not Available576Open in IMG/M
3300011119|Ga0105246_10735986All Organisms → cellular organisms → Bacteria → Acidobacteria868Open in IMG/M
3300012485|Ga0157325_1025860Not Available557Open in IMG/M
3300012905|Ga0157296_10397691Not Available515Open in IMG/M
3300012958|Ga0164299_10197345All Organisms → cellular organisms → Bacteria → Acidobacteria1160Open in IMG/M
3300012988|Ga0164306_11046951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium675Open in IMG/M
3300013296|Ga0157374_10344908All Organisms → cellular organisms → Bacteria → Acidobacteria1479Open in IMG/M
3300013297|Ga0157378_10061570All Organisms → cellular organisms → Bacteria3350Open in IMG/M
3300013306|Ga0163162_10698922All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300013308|Ga0157375_12600149Not Available605Open in IMG/M
3300014262|Ga0075301_1013554All Organisms → cellular organisms → Bacteria → Acidobacteria1294Open in IMG/M
3300014326|Ga0157380_10373121All Organisms → cellular organisms → Bacteria → Acidobacteria1344Open in IMG/M
3300015373|Ga0132257_102745605All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300015374|Ga0132255_100038852All Organisms → cellular organisms → Bacteria → Acidobacteria6104Open in IMG/M
3300015374|Ga0132255_100108767All Organisms → cellular organisms → Bacteria → Acidobacteria3783Open in IMG/M
3300019362|Ga0173479_10026042All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300021445|Ga0182009_10022009All Organisms → cellular organisms → Bacteria → Proteobacteria2430Open in IMG/M
3300025271|Ga0207666_1051707Not Available652Open in IMG/M
3300025549|Ga0210094_1056457All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300025893|Ga0207682_10034473All Organisms → cellular organisms → Bacteria → Acidobacteria2040Open in IMG/M
3300025901|Ga0207688_10234217All Organisms → cellular organisms → Bacteria → Acidobacteria1109Open in IMG/M
3300025907|Ga0207645_10109216All Organisms → cellular organisms → Bacteria → Acidobacteria1790Open in IMG/M
3300025908|Ga0207643_10072656All Organisms → cellular organisms → Bacteria → Acidobacteria1982Open in IMG/M
3300025912|Ga0207707_10709278All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300025917|Ga0207660_10240660All Organisms → cellular organisms → Bacteria → Acidobacteria1425Open in IMG/M
3300025918|Ga0207662_10008335All Organisms → cellular organisms → Bacteria → Acidobacteria5674Open in IMG/M
3300025945|Ga0207679_11837566Not Available553Open in IMG/M
3300025960|Ga0207651_10731851All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium873Open in IMG/M
3300026023|Ga0207677_10310251All Organisms → cellular organisms → Bacteria → Acidobacteria1307Open in IMG/M
3300026075|Ga0207708_10076142All Organisms → cellular organisms → Bacteria → Acidobacteria2573Open in IMG/M
3300026088|Ga0207641_10037530All Organisms → cellular organisms → Bacteria4047Open in IMG/M
3300026089|Ga0207648_12104512Not Available525Open in IMG/M
3300026095|Ga0207676_10228650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1661Open in IMG/M
3300026116|Ga0207674_11506374All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300028379|Ga0268266_10871194All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300028381|Ga0268264_10590052All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300031538|Ga0310888_10201567All Organisms → cellular organisms → Bacteria → Acidobacteria1094Open in IMG/M
3300031720|Ga0307469_11165746Not Available727Open in IMG/M
3300031740|Ga0307468_100725329All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300031854|Ga0310904_11097710All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300032122|Ga0310895_10041522All Organisms → cellular organisms → Bacteria → Acidobacteria1641Open in IMG/M
3300032180|Ga0307471_102811645Not Available618Open in IMG/M
3300032205|Ga0307472_100616992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium960Open in IMG/M
3300033412|Ga0310810_10246261All Organisms → cellular organisms → Bacteria → Acidobacteria1970Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.06%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.25%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.25%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.44%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.44%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.44%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.44%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012485Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610Host-AssociatedOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014262Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10152379713300000364SoilIQQRRELIAMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERTT*
INPhiseqgaiiFebDRAFT_10152639733300000364SoilMIGRLKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERLEQGEGR*
JGI10220J13317_1038298513300001139SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELALERL*
F14TB_10273612023300001431SoilMADDSATHSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLXXXXQGEGGKGEGGRAGPVKRHQ*
soilL1_1010868623300003267Sugarcane Root And Bulk SoilMADEEIGATDRRELIDMIGRRIVANGRELTCGVYLTTTGYEVRAEYADGEVLRTQWAMDTQGARIIANRWVDELELERT*
soilL2_10039160103300003319Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATM*
soilH1_1031581413300003321Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATRWVEELG
soilH2_1006103733300003324Sugarcane Root And Bulk SoilMADDSSTYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVIRTQWAMDTQGGRIIATRWVEELGLERLQQGKGERGKGEGLVQSQGSSNEGFG*
Ga0055438_1013962123300003995Natural And Restored WetlandsMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGEGGP*
Ga0062593_10010636333300004114SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0062593_10014914923300004114SoilMATTDDPANRRELIEMIGRQTDAGGRELTCGIYLTPTGYDVRAEYADGEVVRTQWAMDTQGARIIASRWVEELGLDRTR*
Ga0062593_10023672513300004114SoilAMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0062589_10023232623300004156SoilMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0062592_10129419423300004480SoilMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGL
Ga0062594_10057522113300005093SoilMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDE
Ga0065704_1000341433300005289Switchgrass RhizosphereMATTHDSGTESNRRELIEMIGRQKDAAGRELTCGVYLTPTGYEVRAEYTDGEVVRMQWAMDTQGARIIANRWVDELELERTK*
Ga0065704_1048794023300005289Switchgrass RhizosphereTTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0065715_1009169433300005293Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0065705_1047853813300005294Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0065705_1076042623300005294Switchgrass RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLERLQ*
Ga0065707_1090042713300005295Switchgrass RhizosphereMADDSTPASHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070670_10037154413300005331Switchgrass RhizosphereELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0066388_10027967223300005332Tropical Forest SoilMTNDSGADHRELIEMIGRHRTADARELTCGIYLTPTGYEVRAEYTDGEVLRMQWAMDTQGARIIANRWIQELGLERTDTT*
Ga0066388_10101406313300005332Tropical Forest SoilGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWVHELGLERVTREGTSGSPDL*
Ga0070677_1014772223300005333Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070680_10146701113300005336Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEE
Ga0070689_10111488323300005340Switchgrass RhizosphereIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070661_10107707313300005344Corn RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0070671_10001805733300005355Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0070673_10019114523300005364Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT*
Ga0070688_10013436913300005365Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRW
Ga0070688_10048965313300005365Switchgrass RhizosphereMATTDDSGNRRELIEMIGRKKDARGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0070705_10058540323300005440Corn, Switchgrass And Miscanthus RhizosphereMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARII
Ga0070694_10052626713300005444Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEE
Ga0070694_10122704613300005444Corn, Switchgrass And Miscanthus RhizosphereMATTNDSGNRRELIEMIGRQKDPGGRELTCGIYLTPTGYEVRAEYTDGEVVRTQWAMDTQGARIIASRW
Ga0070678_10038868933300005456Miscanthus RhizosphereDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070678_10137851113300005456Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELG
Ga0070672_10007806143300005543Miscanthus RhizosphereQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0070686_10040202333300005544Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0070695_10082123823300005545Corn, Switchgrass And Miscanthus RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP
Ga0070664_10078688513300005564Corn RhizosphereELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0070664_10125366313300005564Corn RhizosphereMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0068857_10175696813300005577Corn RhizosphereMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVD
Ga0068857_10210663213300005577Corn RhizosphereMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATR
Ga0068866_1134638423300005718Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGREMTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0066903_10805336523300005764Tropical Forest SoilMADDSTPDSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWV
Ga0068863_10003286913300005841Switchgrass RhizosphereELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0068860_10090856423300005843Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0066652_10112114623300006046SoilMSDDSAAHAQRRELIELLGRQTDAAGRELTCGIYLTPTGYEVRAEYTQGEVLRTQWAMDTQGARIIGNRWVEELGLDRVT*
Ga0075417_1031162023300006049Populus RhizosphereMTDDPAPYSRRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGK
Ga0075417_1067351613300006049Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLEGTGTA*
Ga0097621_10143186613300006237Miscanthus RhizosphereAAVGCARMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0075428_10000147363300006844Populus RhizosphereMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGKGEGGRAGPS*
Ga0075433_1001781023300006852Populus RhizosphereMTDDPAPYSRRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGGKGEGGRAGPS*
Ga0075433_1143869213300006852Populus RhizosphereMATTNDSGNRRELIEMIGRQKDPGGRELTCGIYLTPTGYEVRAEYTDGEVVRTQWAMDTQGARIIASRWVEELGLERLQQQ*
Ga0075424_10241570623300006904Populus RhizosphereMAITDDSEAQSRRELIEMVGRQKDAGGRELTCGIYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIASRWVEELGLEGTGTA*
Ga0075419_1143598413300006969Populus RhizosphereMATTDDSGNRRELIEMVGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0111539_1065588733300009094Populus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRTS*
Ga0111539_1138848123300009094Populus RhizosphereMADDSTSYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWADELGLDRDS*
Ga0105245_1020621113300009098Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0075418_1008724243300009100Populus RhizosphereMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERLQQGEGG*
Ga0075418_1113912423300009100Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIATRWVEELGLERLPL*
Ga0114129_1009031213300009147Populus RhizosphereMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIASRWVDELGHDRLQ*
Ga0105243_1210481813300009148Miscanthus RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERIR*
Ga0111538_1143215623300009156Populus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRTS*
Ga0126380_1151386213300010043Tropical Forest SoilMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLARTR*
Ga0126382_1037873623300010047Tropical Forest SoilGSGDGYRIGPETMTDDPAPYSQRRELIEMIGRQMGTDARELTCGIYLTQTGYEVSAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERI*
Ga0126382_1070571413300010047Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWAMDTQGARIIASRWVDELGLERTR*
Ga0126376_1122192413300010359Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWPMDTQAGRIIANRWVDELGLERTR*
Ga0126376_1125689223300010359Tropical Forest SoilMTDDPAPYSQRRELIEMIGRQKGTDGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLER
Ga0126372_1003825943300010360Tropical Forest SoilMTNDSGADHRELIAMIGRHRTADARELTCGIYLTPTGYEVRAEYTDGEVLRMQWAMDTQGARIIANRWIQELGLERTDTT*
Ga0126372_1027483623300010360Tropical Forest SoilMADDSTTHAHRRELIEMIGRRRDAGGRELTCGVYLTQTGYEVRAEFSDGEVLRTQWAMDTQGGRIIANRWADELGLERTT*
Ga0126377_1008000033300010362Tropical Forest SoilMTDDPAPYSQRRELIEMIGRQKGTDGRELTCGIYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIATRWADELGLERI*
Ga0126377_1020856423300010362Tropical Forest SoilMADDSTTDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYTDGEVLRTQWAMDTQGGRIIANRWVDELGLARTR*
Ga0126379_1056924223300010366Tropical Forest SoilMTDNPAPSSQRRELIELIGRQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIASRWVDELGLERVTREGTSGSPDL*
Ga0105239_1360669213300010375Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS*
Ga0134127_10002355113300010399Terrestrial SoilMATTDGSNRRELIEMIGRQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVVRTQWAMDTQGAHIIASRWVEELGLR*
Ga0134123_1257125313300010403Terrestrial SoilMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTRYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV*
Ga0105246_1073598613300011119Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR*
Ga0157325_102586013300012485Arabidopsis RhizosphereMTNHSEADRRELIEMIGRQKDAAGRELTCGVYLTPTGYEVRAEYTDGEVVRMQWAMDTQGAHIIASRWVDELGLERLQQGEGGTPLPSSPFPPSP*
Ga0157296_1039769123300012905SoilMATTDDSGNRRELIEMIGQKKDADGRELTCGVYLTPTGYEVRAEYSDGEVLRTQWAMDTQGGHIIGTRWAEELGLDRAS*
Ga0164299_1019734523300012958SoilMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRW
Ga0164306_1104695113300012988SoilMTDDSAPPSQRRELIELIGQQTDAGGRELTCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0157374_1034490833300013296Miscanthus RhizosphereSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR*
Ga0157378_1006157023300013297Miscanthus RhizosphereMSDDSAAHAQRRELIELLGRQRDAAGRELTCGVYLTPTGYEVCAEYTGGEILRTQWAMDTQGARIIANRWVEELGLDRVT*
Ga0163162_1069892223300013306Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDARGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLVPTR*
Ga0157375_1260014923300013308Miscanthus RhizosphereAMAITDDSQAQSNRRELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL*
Ga0075301_101355423300014262Natural And Restored WetlandsMADDPASYSHRRELIEMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGEGGP*
Ga0157380_1037312113300014326Switchgrass RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLD
Ga0132257_10274560513300015373Arabidopsis RhizosphereELIGQQTDAGGRELMCGVYLTPTGYEVRAEYTDGDVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP*
Ga0132255_10003885253300015374Arabidopsis RhizosphereMATTDDSGAQADRRELIEMIGRQKDAGGRELTCGVYLTPTGYEVRAEYADGEVVRTQWAMDTQGAHIIASRWVDELGLERLQQGEGGTPLPSSPFLPSP*
Ga0132255_10010876723300015374Arabidopsis RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRGVDELGLERTR*
Ga0173479_1002604233300019362SoilRQTDAGGRELTCGVYLTPTGYEVRAEYTDGEVFRTQWAMDTQGARIIANRWVDELGLERVTRAGTSGSPDP
Ga0182009_1002200933300021445SoilMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT
Ga0207666_105170713300025271Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0210094_105645723300025549Natural And Restored WetlandsMADDPASYSHRRELIEMISRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIASRWADELGLERLQQGE
Ga0207682_1003447323300025893Miscanthus RhizosphereMADDSTADSHPRELIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207688_1023421723300025901Corn, Switchgrass And Miscanthus RhizosphereMATTDDSGNRRELIEMIGRQTDAGGRELTCGIYLTPTGYDVRAEYADGEVVRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207645_1010921623300025907Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207643_1007265623300025908Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDPTR
Ga0207707_1070927813300025912Corn RhizosphereMTDDSTAYPDRRELIELVGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV
Ga0207660_1024066023300025917Corn RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0207662_1000833523300025918Switchgrass RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207670_1014460633300025936Switchgrass RhizosphereKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0207679_1183756613300025945Corn RhizosphereELIEAIGRRTDAGGRELTCGVYLTPTGYEARAEYADGEVVRTQWAMDTQGARIIATRWVDELGLERL
Ga0207651_1073185123300025960Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGCELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEELGLDRVT
Ga0207677_1031025123300026023Miscanthus RhizosphereMATTDDSGNRRELIEMIGRKKDPRGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIASRWVDELGLERV
Ga0207708_1007614223300026075Corn, Switchgrass And Miscanthus RhizosphereMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIADRWVDELGLERTR
Ga0207641_1003753013300026088Switchgrass RhizosphereQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTRAGTSGSPDP
Ga0207648_1210451213300026089Miscanthus RhizosphereMADDSTSYSDRRELIELIGRKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWADELGLDRDS
Ga0207676_1022865023300026095Switchgrass RhizosphereMTDDSAPHAQRRELIELIGRQQDAVGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIATRWVEEL
Ga0207674_1150637413300026116Corn RhizosphereMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRW
Ga0268266_1087119423300028379Switchgrass RhizosphereIEMIGRQTDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0268264_1059005223300028381Switchgrass RhizosphereMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWMDELGLERVTLAGTSGSPDP
Ga0310888_1020156713300031538SoilMADDSTPDSHPRELIEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIADRWVDELGL
Ga0307469_1116574623300031720Hardwood Forest SoilMAITDDSGTQSNRRELIEMIGRQTDAGGRELTCGIYLTQTGYEVRAEYTDGEVLRMQWAMDTQGGRIIANRWIDELGLERTK
Ga0307468_10072532913300031740Hardwood Forest SoilMATTDDSGTQSDRRELIEMIGRQKDAGGRELTCGIYLTPTGYDVRAEYTDGEVVRTQWAMDTQGARIIA
Ga0310904_1109771013300031854SoilEMIGRQKDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIANRWVDELGLERTR
Ga0310892_1028952533300031858SoilRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRT
Ga0310895_1004152213300032122SoilNRRELIEVIGRKKDAGGRELTCGVYLTQTGYEVRAEYSDGEVLRTQWAMDTQGGHIIATRWAEELGLDRTS
Ga0307471_10281164513300032180Hardwood Forest SoilMTDDPAPYSHRRELIEMIGRQKGADGRELTCGIYLTQTGYEVRAEYSDGEVVRTQWAMDTQGGRIIATRWADELGLERTT
Ga0307472_10061699223300032205Hardwood Forest SoilMTDDSAPPSQRRELIELIGQQKDAGGRELTCGVYLTPTGYEVRAEYTDGEVLRTQWAMDTQGARIIANRWVDELGLERVTRAGTSGSPDP
Ga0310810_1024626123300033412SoilMADDSTPDSHPRELIEMIGRQMDAGGRELTCGLYLTRTGYEVRAEYSDGEVLRTQWAMDTQGGRIIAD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.