NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070237

Metagenome / Metatranscriptome Family F070237

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070237
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 58 residues
Representative Sequence VNLLQTTLDHESSLVNFEAVQQAPPLAAGDTLGLRGSNIVLLPTPAPRGLFRTGTGTGF
Number of Associated Samples 110
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.77 %
% of genes near scaffold ends (potentially truncated) 90.24 %
% of genes from short scaffolds (< 2000 bps) 86.18 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (78.862 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(15.447 % of family members)
Environment Ontology (ENVO) Unclassified
(31.707 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.724 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.99%    β-sheet: 0.00%    Coil/Unstructured: 77.01%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00196GerE 17.89
PF00491Arginase 9.76
PF09980DUF2214 2.44
PF00873ACR_tran 1.63
PF13472Lipase_GDSL_2 1.63
PF10282Lactonase 1.63
PF07690MFS_1 1.63
PF00072Response_reg 0.81
PF00719Pyrophosphatase 0.81
PF11746DUF3303 0.81
PF13561adh_short_C2 0.81
PF03795YCII 0.81
PF06224HTH_42 0.81
PF08281Sigma70_r4_2 0.81
PF069833-dmu-9_3-mt 0.81
PF02333Phytase 0.81
PF13620CarboxypepD_reg 0.81
PF02870Methyltransf_1N 0.81
PF01494FAD_binding_3 0.81
PF05163DinB 0.81
PF00248Aldo_ket_red 0.81
PF02776TPP_enzyme_N 0.81
PF00285Citrate_synt 0.81
PF13358DDE_3 0.81
PF02518HATPase_c 0.81
PF08241Methyltransf_11 0.81
PF07730HisKA_3 0.81
PF02148zf-UBP 0.81
PF00126HTH_1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 9.76
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.63
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 0.81
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.81
COG0372Citrate synthaseEnergy production and conversion [C] 0.81
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.81
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.81
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.81
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.81
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.81
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.81
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.81
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.81
COG42473-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)Lipid transport and metabolism [I] 0.81
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.81
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.81
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.86 %
UnclassifiedrootN/A21.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_100699847All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300001431|F14TB_101498180All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300004156|Ga0062589_101534075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300004157|Ga0062590_100514543All Organisms → cellular organisms → Bacteria → Acidobacteria1024Open in IMG/M
3300004463|Ga0063356_101695615All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300005093|Ga0062594_100522216All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300005175|Ga0066673_10101785All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300005187|Ga0066675_11177127All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005294|Ga0065705_10611050All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005337|Ga0070682_101248120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300005345|Ga0070692_11009690All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300005438|Ga0070701_10015921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3484Open in IMG/M
3300005438|Ga0070701_10690979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300005440|Ga0070705_100518108Not Available908Open in IMG/M
3300005441|Ga0070700_101526558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans568Open in IMG/M
3300005445|Ga0070708_100389523Not Available1314Open in IMG/M
3300005450|Ga0066682_10346108All Organisms → cellular organisms → Bacteria → Acidobacteria958Open in IMG/M
3300005456|Ga0070678_100191456Not Available1682Open in IMG/M
3300005457|Ga0070662_101415165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300005467|Ga0070706_102062649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300005468|Ga0070707_100317490All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1514Open in IMG/M
3300005471|Ga0070698_100800143All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300005535|Ga0070684_102083125All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans535Open in IMG/M
3300005536|Ga0070697_100112517All Organisms → cellular organisms → Bacteria2270Open in IMG/M
3300005545|Ga0070695_101088716All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans653Open in IMG/M
3300005546|Ga0070696_100778603All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300005546|Ga0070696_100960442All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005549|Ga0070704_101531544All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005560|Ga0066670_10349622All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300005561|Ga0066699_10142085All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300005578|Ga0068854_101032704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans729Open in IMG/M
3300005598|Ga0066706_10753214All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300005615|Ga0070702_101371563Not Available577Open in IMG/M
3300005616|Ga0068852_102557315All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300005713|Ga0066905_100565011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium957Open in IMG/M
3300005764|Ga0066903_106366765Not Available616Open in IMG/M
3300005844|Ga0068862_101213895All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300006049|Ga0075417_10440090All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300006237|Ga0097621_100655202All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300006237|Ga0097621_102340858All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300006358|Ga0068871_100869979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium834Open in IMG/M
3300006358|Ga0068871_102240508Not Available521Open in IMG/M
3300006800|Ga0066660_10296145All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300006844|Ga0075428_102057264All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300006847|Ga0075431_101533321All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300006852|Ga0075433_10018357All Organisms → cellular organisms → Bacteria5813Open in IMG/M
3300006852|Ga0075433_10098645All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2586Open in IMG/M
3300006852|Ga0075433_11005688All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300006853|Ga0075420_100452257All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300006854|Ga0075425_100141394All Organisms → cellular organisms → Bacteria2755Open in IMG/M
3300006871|Ga0075434_101062922All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300006903|Ga0075426_10588544All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300006914|Ga0075436_101546432Not Available504Open in IMG/M
3300006969|Ga0075419_10638996All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300007004|Ga0079218_10357350All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300007004|Ga0079218_11114376All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans807Open in IMG/M
3300009100|Ga0075418_12259457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans593Open in IMG/M
3300009147|Ga0114129_11611289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300009156|Ga0111538_11483474All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300009162|Ga0075423_10310446All Organisms → cellular organisms → Bacteria → Acidobacteria1653Open in IMG/M
3300009162|Ga0075423_10632131All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300009162|Ga0075423_11030838All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300010047|Ga0126382_11484164All Organisms → cellular organisms → Bacteria → Proteobacteria623Open in IMG/M
3300010301|Ga0134070_10387062Not Available549Open in IMG/M
3300010362|Ga0126377_10217003All Organisms → cellular organisms → Bacteria → Acidobacteria1843Open in IMG/M
3300010362|Ga0126377_11620500All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans722Open in IMG/M
3300010398|Ga0126383_13538920All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300010399|Ga0134127_11370280All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria778Open in IMG/M
3300010401|Ga0134121_12633372All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300012354|Ga0137366_10754304All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300012358|Ga0137368_10216822All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300012360|Ga0137375_10288014All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300012373|Ga0134042_1171948All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300012407|Ga0134050_1354258All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300012509|Ga0157334_1051432All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300012911|Ga0157301_10197155Not Available675Open in IMG/M
3300012944|Ga0137410_11953675All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300012955|Ga0164298_11513366All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300012957|Ga0164303_10776696Not Available656Open in IMG/M
3300012960|Ga0164301_10952699All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300012986|Ga0164304_11398870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300013297|Ga0157378_11079674All Organisms → cellular organisms → Bacteria → Acidobacteria839Open in IMG/M
3300013306|Ga0163162_12260603Not Available625Open in IMG/M
3300014325|Ga0163163_12157777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300014876|Ga0180064_1061520All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300015371|Ga0132258_12647399All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300017792|Ga0163161_11557465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300018476|Ga0190274_12495952Not Available614Open in IMG/M
3300024056|Ga0124853_1229184All Organisms → cellular organisms → Bacteria2026Open in IMG/M
3300025901|Ga0207688_10667476All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300025922|Ga0207646_11912711Not Available505Open in IMG/M
3300026075|Ga0207708_10308566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1288Open in IMG/M
3300027639|Ga0209387_1063186All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans841Open in IMG/M
3300027873|Ga0209814_10330577All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300027882|Ga0209590_10921848All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300028380|Ga0268265_11288954All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300028828|Ga0307312_10386879Not Available917Open in IMG/M
3300031229|Ga0299913_11448366All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300031538|Ga0310888_10995532All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans527Open in IMG/M
3300031731|Ga0307405_10948446All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300031740|Ga0307468_101570101All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300031769|Ga0318526_10445275Not Available529Open in IMG/M
3300031820|Ga0307473_10002867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5059Open in IMG/M
3300031908|Ga0310900_10641899All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300031908|Ga0310900_11873293All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300031911|Ga0307412_12003890All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans536Open in IMG/M
3300032004|Ga0307414_10327060All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans1307Open in IMG/M
3300032013|Ga0310906_10113879All Organisms → cellular organisms → Bacteria → Proteobacteria1511Open in IMG/M
3300032017|Ga0310899_10249309All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans806Open in IMG/M
3300032179|Ga0310889_10510018All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300032180|Ga0307471_101410196All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300032180|Ga0307471_104304742All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300034817|Ga0373948_0160429Not Available567Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere15.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.25%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.25%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere3.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.44%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.44%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.44%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.44%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.63%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.63%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014876Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10069984713300001431SoilQVNLLQTTLDYESAVVNFEAVQXXXXGTSGDTLGIGPANVVPLQTPAPRGLFRQNSSAGF
F14TB_10149818043300001431SoilQVNLLQTTFDYESSLVNFEAVQQAPPLTSGDTIGVRGSNIVLLPPSTPRGAFRPGAGGGFQ*
soilH2_1027727513300003324Sugarcane Root And Bulk SoilTTLDYESATVSFEAVQQAPPGDAGTTVTVNGANIVLQPTTTPRGIFPANGGQ*
Ga0062589_10153407513300004156SoilQTTLDYESAVVNFEAVQQAPAGTSGDALGIGPANVVPVPTPSPRGLFRQGSGAAF*
Ga0062590_10051454313300004157SoilQVNLLQTMLDYESAIVNFEAVQQAPPLAAGDTVGVRGANIVPIPLSTPRGIFRAGATSGF
Ga0063356_10169561543300004463Arabidopsis Thaliana RhizosphereDYESALVNFEAVQQAPAGTAAADTLGIGPANVVVLPTPAPQGLFRQGSGAGF*
Ga0062594_10052221643300005093SoilQAQVNLLQTTLDHESALVNFEAVQQAPAGVGADTLSPAGTSVSPLPTPAPQGLFRQGASAGF*
Ga0066673_1010178513300005175SoilAQRDLLQAQVNLLQTTLDYESALVNFEAVQQAPAGMIGDTLGVRGAAIVAVPTASPRGLFRQGSGVGF*
Ga0066675_1117712713300005187SoilVNLLQTTLDYESSVVNFEAVQQAPAGIAGDTLAVRGSNVVLVPTPAPRGLFRQGSGGGF*
Ga0065712_1083322213300005290Miscanthus RhizosphereVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPSPRGLFRQGSGAAF*
Ga0065705_1061105023300005294Switchgrass RhizosphereQVNLLQTTLDYESSLVNFEAVQQAPPLAAGGAVSLRGANIVLVPTPAPRGVFRPGAGGAFQE*
Ga0070683_10231782923300005329Corn RhizosphereQARVNLLQTTLDYDSATVTFEAVQQAPPGDSATTVTVRGADIVLQPTPSPRGIFRPDGGQ
Ga0070690_10173899613300005330Switchgrass RhizosphereDYESATVNLEAVQQAPTADGGAVTVRGADIVLQPPATPRGLFRTGAGQ*
Ga0070682_10124812013300005337Corn RhizosphereLQAQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGIGPANVVPLQTPAPRGLFRQGSGAAF*
Ga0070692_1100969023300005345Corn, Switchgrass And Miscanthus RhizosphereLQAQVNLLQTTLDYESALVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPQGLFRQGSAAAF*
Ga0070701_1001592143300005438Corn, Switchgrass And Miscanthus RhizosphereLLQTTLDYESAVVNFEAVQQAPAGVAGDALGVRNANVVLMPTPTPRGLFRQGSGLGF*
Ga0070701_1069097913300005438Corn, Switchgrass And Miscanthus RhizosphereAQRDLLQAQVNLLQTTLDYESALVNFEAVQQAPAGVGGDTLGPGGTNVIAVPTPAPRGLFRQGSATGF*
Ga0070705_10051810813300005440Corn, Switchgrass And Miscanthus RhizosphereVLDYQSAVVNFEAVQQAPPAGAGETVGVRGAQIVGLPTPTPRGIFRTGGQ*
Ga0070700_10152655823300005441Corn, Switchgrass And Miscanthus RhizosphereLQTSLDFESALVNFEAVQQAPPLAAGSSIGLRGANVVLVPTTTPRGLFRPGAGF*
Ga0070708_10038952313300005445Corn, Switchgrass And Miscanthus RhizosphereVNLLQTVLDYQSAVVNFEAVQQAPPARAGETVGVRGAQIVAFPTPMPRGVFRTGGQ*
Ga0066682_1034610823300005450SoilLQTTLDHESSLVNFEAVQQAPPLAAGDTLGLRGSNIVLLPTPAPRGLFRTGTGTGF*
Ga0070678_10019145643300005456Miscanthus RhizosphereQVNLLQTMLDYQSAVVNFEAVQQAPPAGAGDTVGVRGTQIVPLPTPQPRGVFRTGAQ*
Ga0070662_10141516513300005457Corn RhizosphereNLLQTTLDYESAVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPSPRGLFRQGSGAAF*
Ga0070681_1040930513300005458Corn RhizosphereLLQARVNLLQTTLDYDSATVTFEAVQQAPPGDSATTVTVRGADIVLQPTPSPRGIFRPDGGQ*
Ga0070706_10206264923300005467Corn, Switchgrass And Miscanthus RhizosphereQTTLDYESALVNFEAVQQAAPLADADTVGLRGASIVQLPTPTPRGVFRPGAGSGF*
Ga0070707_10031749013300005468Corn, Switchgrass And Miscanthus RhizosphereLLQTTLDYESSLVNFEAVQQAPAGVTGDTLTVQGASVVAVPTPTPRGLFRPGAGSGF*
Ga0070698_10080014333300005471Corn, Switchgrass And Miscanthus RhizosphereVNLLQTTLDYESSLVNFEAVQHAPPLAASGDTVGLRGANIVLLPTPTPRGLFRTGSE*
Ga0070684_10208312513300005535Corn RhizosphereRDLLEAEVNLLQTTLDYESALVTFEAVQQAPPMSSGDTVRVVGASIVELPTSSPRGLFRAGAGTGF*
Ga0070697_10011251763300005536Corn, Switchgrass And Miscanthus RhizosphereNLLQTTLDYESAVVSFEAVQQAPAGITGDTLGVRGASIVAVPTPTPRGLFRQAVGAGF*
Ga0070695_10108871613300005545Corn, Switchgrass And Miscanthus RhizosphereQTTLDHESALVNFEAVQQAPPLTAGATLGINGSSIVLIQTPSPRGLFRPGAGF*
Ga0070696_10077860333300005546Corn, Switchgrass And Miscanthus RhizosphereLLQAQVNLLQTTLDYESAIVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPQGLFRQGSAAAF*
Ga0070696_10096044233300005546Corn, Switchgrass And Miscanthus RhizosphereQAQVNLLQTTLDYEASLVNFEAVQQAPPLTAGDTIGVRGSNIVLLPPSTPRGAFRPGAGGGFQ*
Ga0070704_10153154433300005549Corn, Switchgrass And Miscanthus RhizosphereTTLDYESSLVNFEAVQQAPPLAAGDTIGVRGSNIVLLPPATPRGAFRPGAGGGFQ*
Ga0066670_1034962223300005560SoilVNFEALQQAPALGDPLAGDSIGLRGSNIVLLPTPAARGLFRQGAGGGLLQ*
Ga0066699_1014208533300005561SoilLQAQVNLLQTTLDYESAVVSFEAVQQAPAGLSGDTLGVRGAAIVAVPTPSPRGLFRQGSGLGF*
Ga0070664_10085736433300005564Corn RhizosphereQTTLDYESATVNLEAVQQAPTADGATVTVRGADIVLQPPATPRGLFRTGAGQ*
Ga0068854_10103270423300005578Corn RhizosphereLLEAEVNLLQTTLDYESALVTFEAVQQAPPMSSGDTVRVVGASIVELPTSSPRGLFRAGAGTGF*
Ga0066706_1075321423300005598SoilLQTTLDHESSLVNFEAVQQAPPLAAGDTFGLRGSNIVLLPTPAPRGLFRTGTGTGF*
Ga0070702_10137156323300005615Corn, Switchgrass And Miscanthus RhizosphereRDLLQAQVNLLQTTLDYQSAVVNFDAVQQAPLDPSRGAIGVRGGDIVLLPTATPRGLFRTGQ*
Ga0068852_10255731513300005616Corn RhizosphereLLQTTLDYESAVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPSPRGLFRQGSGAAF*
Ga0066905_10056501133300005713Tropical Forest SoilALVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPTPQGLFRQGASAGF*
Ga0066903_10636676523300005764Tropical Forest SoilDLLQAQVNLLQTSLDYESSLVNFEAVQQAPPLTSGDTIAVRGANVVLLPPATPRGIFRPGAGGGLQ*
Ga0068862_10121389513300005844Switchgrass RhizosphereAQVNLLQTMLDYESAIVNFEAVQQAPPLTAGDTVGVRGANIVPIPLSTPRGIFRAGATSGF*
Ga0075417_1044009013300006049Populus RhizosphereLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGVGPANVLPLPTPAPRGLFRQNSSAGF*
Ga0097621_10065520213300006237Miscanthus RhizosphereDLLQAQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPSPRGLFRQGSGAAF*
Ga0097621_10234085813300006237Miscanthus RhizosphereLQTTLDYESALVNFEAVQQVPAGTSDDALGIGPTNVVPLPTPAPRGLFRQGASAAF*
Ga0068871_10086997923300006358Miscanthus RhizosphereQAQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPAPRGLFRQGSGAAF*
Ga0068871_10224050823300006358Miscanthus RhizosphereQVNLLQTMLDYQSAVVNFEAVQQAPPAGASDTVGVSGTQIVALPTPQPRGLFRTGGQ*
Ga0066660_1029614513300006800SoilAQVNLLQTTLDYESAVVSFEAVQQAPAGLSGDTLGVRGAAIVAVPTPSPRGLFRQGSGLGF*
Ga0075428_10205726413300006844Populus RhizosphereQTTLDYQSALVNFEAVQQAPPLASGETVEVRGANVVLLPTPAPRGVFRQGTSLGLQ*
Ga0075431_10153332113300006847Populus RhizosphereAQRDLLEAQVNLLQTSLDYESAIVNFEAVQQAPPLAAGDTVGVRGANIVPVPLSTPRGIFRTGAGSGF*
Ga0075433_10018357113300006852Populus RhizosphereNLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGVGPASVLPLPTPAPRGLFRQNSSAGF*
Ga0075433_1009864553300006852Populus RhizosphereDYESAVVNFEAVQQAPPLAAGETIGVRGASIVSVPTPSPRGVFRLAAGSGF*
Ga0075433_1100568813300006852Populus RhizosphereNLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGIGPANVVPLQTPAPRGLFRQGSGAAF*
Ga0075420_10045225733300006853Populus RhizosphereAQRDLLEAQVNLLQTTLDYESALVNFEAVQQAPPLAAGDTVGVRGGNIVMVPTSAPRGLFRPGAGSGF*
Ga0075425_10014139413300006854Populus RhizosphereLDYESALVTFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPRGVFRAGEGAAF*
Ga0075434_10106292233300006871Populus RhizosphereQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGVGPASVLPLPTPAPRGLFRQNSSAGF
Ga0075426_1058854433300006903Populus RhizosphereLLEAQVNLLQTSLDYESALVNFEAVQQAPPAGADGNGSGRAGVVALPTPAPRGIFRAGGQ
Ga0075436_10154643213300006914Populus RhizosphereLQTTLDYESALVNFEAVQQAPPIAAGDSVGVRGATIVRLPTPTPSGLFRSGAGTGF*
Ga0075419_1063899613300006969Populus RhizosphereTTLDYESSLVKFEAVQQAPPLTTGDTVGLRGASIVLFPTPTPRGVFRPGAGAGF*
Ga0079218_1035735013300007004Agricultural SoilEYESSRVNFEAVQQAPPLTAGDTIGVRGSNIVLLPPATPRGAFRPGAGGGFQ*
Ga0079218_1111437613300007004Agricultural SoilSLLQTTLEYESALVNFEAVQLAPPRSAGETVAMRGGNIVELPTADPRGIFRPTAGSGF*
Ga0075418_1225945723300009100Populus RhizosphereVNLLQTSLDFESALVNFEAVQQAPPLAAGSSVGLRGASVVLVPTPTPRGLFRPGAGF*
Ga0114129_1161128913300009147Populus RhizosphereTLDYESSLVNFEAVQQAAPLTAGDTIGLRGANVVLLPTSTPRGIFRPGATQGFH*
Ga0111538_1148347433300009156Populus RhizosphereYESSLVNFEAVQQAPPLTSGDTIGVRGSSIVLLPPSTPRGAFRPGSGGGFQ*
Ga0075423_1031044643300009162Populus RhizosphereYESAVVNFEAVQQAPPLAAGETIGVRGASIVSVPTPSPRGVFRLAAGSGF*
Ga0075423_1063213113300009162Populus RhizosphereDYESSIVNFEAVQQAPPLEPGGDTIGIRGSSIVLLPPPTPRGAFRPGGGF*
Ga0075423_1103083843300009162Populus RhizosphereLQADLNLLQTTLDYESSLVNFEAVQQAAPLTAGDTIGLRGANVVLLPTSTPRGIFRPGATQGFQ*
Ga0105248_1189043933300009177Switchgrass RhizosphereTLLQTMLDYQSAVVNLEALEQAPPAGAGAVTVRGADIILPPTPAPRGLFRPGAGQ*
Ga0126382_1148416413300010047Tropical Forest SoilNLLQTTLDYESALVAFDAVQQAPPLNAGSTVGVTGASVVLMPTPNPRGIFRQGALTGF*
Ga0134070_1038706223300010301Grasslands SoilLQAQVNLLQTTLDYESALVNFEAVQQAPPLAAGDTVAVQGANIVLLPTPTPRGVFRPGAGVGF*
Ga0126377_1021700333300010362Tropical Forest SoilRDLLEAQVNLLQTTLDYQSSLVNFEAVQLAPPLAEGDRVTLSGADVVAIPISTPRGIFRTGTGGF*
Ga0126377_1162050023300010362Tropical Forest SoilLDYESSLVNFEAVQLAPPLTEGDRVTVSGADVVAIPLSTPRGLFLAGSGGGF*
Ga0126383_1353892013300010398Tropical Forest SoilQTMLDYQSSLVVFEAVQQAPPLTDGDTVRVSGSNVVVLPTPAPTGLFRTSASPF*
Ga0134127_1137028033300010399Terrestrial SoilLDYESAVVNFEAVQQAPPLTAGDTVGVRGSNVVFLPTPQPQGIFRPGASTGF*
Ga0134121_1263337213300010401Terrestrial SoilQVNLLQTTLDYESSLVNFEAVQQAPAGVTGDTLTVQGASVVAVPTPTPRGLFRPGAGSGF
Ga0137366_1075430413300012354Vadose Zone SoilTLDYESSLVNFEAVQQAPPLADGETVGIRGAEIVRLPTSTPRGLFRTGAIQGFQ*
Ga0137368_1021682223300012358Vadose Zone SoilRTTFDYESSLVNFEAVQQAPPTAAGDTVGLRGANIVPLPTPAPRGLFRSAAGTVFQP*
Ga0137375_1028801413300012360Vadose Zone SoilESSLVNFEAVQQAPPTAAGDTVGLRGANIVPLPTPAPRGLFRSAAGTVFQP*
Ga0134042_117194823300012373Grasslands SoilDLLQAQVNLLQTTLDHESSLVNFEAVQQAPPLAAGDTLGLRGSNIVLLPTPAPRGLFRTGTGTGF*
Ga0134050_135425823300012407Grasslands SoilVNLLQTTLDHESSLVNFEAVQQAPPLAAGDTLGLRGSNIVLLPTPAPRGLFRTGTGTGF*
Ga0157334_105143213300012509SoilLLQAQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDSLGIGPANVVPVPTPSPRGLFRQGSGAGF*
Ga0157301_1019715513300012911SoilTTLDYESSLVNFEAVQQAPPLTGGDTIGVRGSNIMLLPPATPRGAFRPGAGGGF*
Ga0137410_1195367513300012944Vadose Zone SoilESSLVNFEAVQQAPAGTSGDTLAVRGASIVPAPTPQPRGLFRQGSGAGF*
Ga0164298_1151336613300012955SoilAQRDLLEAQVNLLQVTLEYESALVNFEAVQQAPPLAAGDTIGVNGSSVILAPPSTPRGLFRAGSGSIF*
Ga0164303_1077669613300012957SoilLVTFEAVQQAPAGTSDDTLGIGPANVMQLPTPAPRGVFRAGESAAF*
Ga0164301_1095269913300012960SoilQRDLLEAQVNLLQTTLDYESALVTFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPRGVFRAGEGAAF*
Ga0164304_1139887013300012986SoilNLLQTTLDYESALVTFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPRGVFRAGEGAAF*
Ga0157378_1107967413300013297Miscanthus RhizosphereTLDYESALVTFEAVQQAPAGTGGDTLGIGPANVVPLPTPAPRGVFRAGEGAAF*
Ga0163162_1226060323300013306Switchgrass RhizosphereLLQTMLDYQSATVNFDAVQQAPPAGAGDVTVRGANIILPPTPAPQGLFRAGAGQ*
Ga0163163_1215777733300014325Switchgrass RhizosphereYESALVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPRGLFRQDAGAAF*
Ga0180064_106152013300014876SoilQTTLDYESSLVNFEAVQQAPPLTTGDTVGLRGASIVLFPAPPPRGVFRPGAGAGF*
Ga0132258_1264739943300015371Arabidopsis RhizosphereQVNLLQTTLDYESALVTFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPRGVFRAGEGAAF
Ga0163161_1155746513300017792Switchgrass RhizosphereRDLLQAQVNLLQTTLDYESAMVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPQGLFRQGSAAAF
Ga0190274_1249595213300018476SoilLLQTMLDYQSAVVNFEAVQEAPPVGASDTVGVRGTQIVALPTPQPRGLFRTGAQ
Ga0124853_122918443300024056Freshwater WetlandsQAEVNLLQNLLDYESALVNFEAIQQAPPAGEPDAVAVRGATIIPLPTPEPQGVFRPQALQ
Ga0207688_1066747613300025901Corn, Switchgrass And Miscanthus RhizosphereVNLLQTTLDYQSSLLNFEAVQQAPPLTAGDTAALRGANVVFLPTPAPRGLFRPGSGGGFE
Ga0207646_1191271113300025922Corn, Switchgrass And Miscanthus RhizosphereNLLQTTLDYESSLVNFEAVQQAPPLADGETVGIRGAEIVRLPTSTPRGVFRPGAGQGFQ
Ga0207669_1013515313300025937Miscanthus RhizosphereQTMLDYQSATVNFEAVQQAPPAGAGDVTVRGADIILPPTPAPRGLFRAGAGQ
Ga0207679_1060180833300025945Corn RhizosphereQTTLDYESATVNLEAVQQAPTADGATVTVRGADIVLQPPATPRGLFRTGAGQ
Ga0207708_1030856613300026075Corn, Switchgrass And Miscanthus RhizosphereDLLQAQVNLLQTMLDYQSSLVAFEAVQQAPPLTAGDTVRVNGSNVVVQPPPAPGGIFRPGASQFQ
Ga0208185_100632833300027533SoilAQRDLLEAQVNLLQTMLDYESALVTFEAVQLASPLAAGATIEVRGATILPLTPPSPRGAFRPGSGGGL
Ga0209387_106318613300027639Agricultural SoilVNLLQTSLDFESALVNFEAVQLAPPLSAGAISVGVRGANVIAAPSPTSAPRGAFRPGAGF
Ga0209814_1033057723300027873Populus RhizosphereQAQVNLLQTTLDYESAVVNFEAVQQAPAGTSGDTLGVGPANVLPLPTPAPRGLFRQNSSAGF
Ga0209590_1092184813300027882Vadose Zone SoilQRDLLQAQVNLLQTTLDHESSLVNFEAVQQAPPLAAGDTLGLRGSNIVLLPTPAPRGLFRTVTGTGF
Ga0268265_1128895413300028380Switchgrass RhizosphereQTMLDYESAIVNFEAVQQAPPLTAGDTVGVRGANIVPIPLSTPRGIFRAGATSGF
Ga0307312_1038687913300028828SoilVNLLQTVLDYQSAVVNFEAVQQAPPAGAGETVGVRGAQIVALPTPTPRGIFRTGGQ
Ga0299913_1144836613300031229SoilTTLDYQTSLVNFEAVQQAPPLTAGDTVGVRGSNVVLLPTSAPRGLFRQGAGSGF
Ga0310888_1099553223300031538SoilQTMFDYESALVNFEAVQLAPPLSAGNRVVVSGSNIVLLPTPSPRGLFRPGSSSGF
Ga0307405_1094844623300031731RhizosphereLLEAQVNLLQTSLDYESALVSFDAVQQAAPAGADGAAPARSSVVALPAAQPRGIFRSGGE
Ga0307468_10157010113300031740Hardwood Forest SoilESSLVNFEMVQQAPPLTAGDTIGVRGSNIVLLPPSTPRGAFRPGAGGGFQ
Ga0318526_1044527523300031769SoilLQAQVNLLQTTLDHQSALVLFEAVQQAPPPGSSAEIGIRGADIVLMPTPTPRGLFRPGAG
Ga0307473_1000286713300031820Hardwood Forest SoilLLQTTLDYESAVVNVEAVQQAPAGITGDALTVRGASVVAVPTPTPRGLFRQGAGTGF
Ga0310900_1064189933300031908SoilTTLDYESSLVNFEAVQQAPPLMGGDTIGVRGSNIMLLPPATPRGAFRPGAGGGF
Ga0310900_1187329323300031908SoilRDLLQAQVNLLQTTLDYESSLVNFEAVQQAPPLTAGDTVGVRGSGIVLLPTSAPRGVFRPGAGAGLP
Ga0307412_1200389013300031911RhizosphereVLQTLLEHQSAIVNFEAVQFAPPLTAGDTVGVRNASIVLLPPAAPRGIFRPGSVAGF
Ga0307414_1032706033300032004RhizosphereLQTTLEYESALVNFEAVQQAPPLAAGDTVGVRGASVVLVPTATPSGIFRGNAGF
Ga0310906_1011387913300032013SoilQVNLLQTTLDYESALVNFEAVQRAPAGTSGDTLGIGPANVVPLPTPAPQGLFRQGSAAAF
Ga0310899_1024930923300032017SoilVNLLQTSLDFESALVNFEAVQQAPPLAAGSSIGLRGANVILVPTTTPRGLFRPGAGF
Ga0310889_1051001813300032179SoilFDYESSLVNFEAVQQAPAGTSGDTLGIGPANVVPLPTPAPQGLFRQGSAAAF
Ga0307471_10141019633300032180Hardwood Forest SoilDVNLLQTTLDYESSLVNFEAVQQAPPLGAGESVGIQGADIVRLPTPTPRGIFRPGASQGF
Ga0307471_10430474213300032180Hardwood Forest SoilVNLLQTTLDYESSLVNFEAVQQAPAGTSGDTLAVQGASIVLAPTPQPRGLFRQGAGGGF
Ga0373948_0160429_3_1943300034817Rhizosphere SoilQAQVNLLQTTFDYESSLVNFEAVQQAPPLTSGDTIGVRGSNIVLLPPSTPRGAFRPGAGGGFQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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