Metagenome / Metatranscriptome Family F070340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	55 residues
Representative Sequence	MGRLFGFLSVVIVLGVGMYIYSRQAQSSSAAAGANSPKAAINITGVRAD
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.24 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.62 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.431 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.260 % of family members)
Environment Ontology (ENVO)	Unclassified (21.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.911 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.65% β-sheet: 0.00% Coil/Unstructured: 49.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13335	Mg_chelatase_C	4.07
PF00498	FHA	3.25
PF03054	tRNA_Me_trans	2.44
PF13720	Acetyltransf_11	1.63
PF12779	WXXGXW	1.63
PF05096	Glu_cyclase_2	1.63
PF01594	AI-2E_transport	1.63
PF00977	His_biosynth	1.63
PF01790	LGT	0.81
PF11008	DUF2846	0.81
PF14360	PAP2_C	0.81
PF02446	Glyco_hydro_77	0.81
PF08281	Sigma70_r4_2	0.81
PF01035	DNA_binding_1	0.81
PF00155	Aminotran_1_2	0.81
PF00440	TetR_N	0.81
PF01546	Peptidase_M20	0.81
PF13699	DUF4157	0.81
PF10647	Gmad1	0.81
PF02566	OsmC	0.81
PF07238	PilZ	0.81
PF13536	EmrE	0.81
PF00563	EAL	0.81
PF13414	TPR_11	0.81
PF02803	Thiolase_C	0.81
PF13541	ChlI	0.81
PF03745	DUF309	0.81
PF01872	RibD_C	0.81
PF02550	AcetylCoA_hydro	0.81
PF04014	MazE_antitoxin	0.81
PF00326	Peptidase_S9	0.81
PF12867	DinB_2	0.81
PF09411	PagL	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	2.44
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.63
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.81
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.81
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.81
COG0427	Propionyl CoA:succinate CoA transferase	Energy production and conversion [C]	0.81
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	0.81
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.81
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.81
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.81
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.81
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.81
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.81
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.81
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.81
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.43 %
Unclassified	root	N/A	10.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.98 %
Unclassified	root	N/A	10.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.57 %
Unclassified	root	N/A	10.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.21 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.57 %
Unclassified	root	N/A	10.57 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.21 %
Unclassified	root	N/A	10.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.94 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.81 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.81 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.21 %
Unclassified	root	N/A	10.57 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.63 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.81 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.81 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.81 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.21 %
Unclassified	root	N/A	10.57 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.81 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Methylobacterium dankookense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium dankookense	0.81 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.81 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.21 %
Unclassified	root	N/A	10.57 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.81 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.81 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.81 %
Methylobacterium dankookense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium dankookense	0.81 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.81 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.81 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001159\|JGI12650J13346_1006943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300001174\|JGI12679J13547_1000393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1892	Open in IMG/M
3300001593\|JGI12635J15846_10289434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300001867\|JGI12627J18819_10143544	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300002245\|JGIcombinedJ26739_101004104	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300004082\|Ga0062384_100232416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300004091\|Ga0062387_101643779	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300004121\|Ga0058882_1014202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300004479\|Ga0062595_101756465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005538\|Ga0070731_10008803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7666	Open in IMG/M
3300005541\|Ga0070733_11055756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	545	Open in IMG/M
3300005545\|Ga0070695_101465789	Not Available	567	Open in IMG/M
3300005563\|Ga0068855_102205845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	553	Open in IMG/M
3300005591\|Ga0070761_10240604	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005602\|Ga0070762_11225169	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300005995\|Ga0066790_10326630	Not Available	654	Open in IMG/M
3300006028\|Ga0070717_10001266	All Organisms → cellular organisms → Bacteria	17259	Open in IMG/M
3300006028\|Ga0070717_10641606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300006176\|Ga0070765_100886454	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300006176\|Ga0070765_101702498	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300006755\|Ga0079222_11328670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300006800\|Ga0066660_11620149	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300009525\|Ga0116220_10612466	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300009700\|Ga0116217_10179202	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300009764\|Ga0116134_1307987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010043\|Ga0126380_10145881	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300010159\|Ga0099796_10107118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300010379\|Ga0136449_100231921	All Organisms → cellular organisms → Bacteria → Acidobacteria	3456	Open in IMG/M
3300011120\|Ga0150983_14340493	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300011269\|Ga0137392_10448082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012096\|Ga0137389_11001841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300012209\|Ga0137379_10366829	Not Available	1349	Open in IMG/M
3300012349\|Ga0137387_10326452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1110	Open in IMG/M
3300012357\|Ga0137384_10648072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012917\|Ga0137395_10491143	Not Available	884	Open in IMG/M
3300012917\|Ga0137395_10551634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300012918\|Ga0137396_10965475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012922\|Ga0137394_10490448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300012927\|Ga0137416_11398924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300012930\|Ga0137407_10851083	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300014169\|Ga0181531_10607471	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	678	Open in IMG/M
3300015054\|Ga0137420_1020770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300015265\|Ga0182005_1172553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300017932\|Ga0187814_10166412	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300017938\|Ga0187854_10414565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300017943\|Ga0187819_10217623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1123	Open in IMG/M
3300017943\|Ga0187819_10461122	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300017955\|Ga0187817_10259049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300017961\|Ga0187778_10026271	All Organisms → cellular organisms → Bacteria → Acidobacteria	3558	Open in IMG/M
3300017972\|Ga0187781_10683019	Not Available	742	Open in IMG/M
3300017988\|Ga0181520_10691023	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300017995\|Ga0187816_10091005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1305	Open in IMG/M
3300018021\|Ga0187882_1227235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300018030\|Ga0187869_10150906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300018035\|Ga0187875_10736217	Not Available	517	Open in IMG/M
3300018085\|Ga0187772_10056454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2430	Open in IMG/M
3300018085\|Ga0187772_11008411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300018088\|Ga0187771_10765661	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300020580\|Ga0210403_10278712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300020583\|Ga0210401_10055899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3721	Open in IMG/M
3300021088\|Ga0210404_10304055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300021170\|Ga0210400_10632771	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300021171\|Ga0210405_10340791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300021178\|Ga0210408_11179176	Not Available	586	Open in IMG/M
3300021181\|Ga0210388_10019498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5472	Open in IMG/M
3300021181\|Ga0210388_10389281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300021403\|Ga0210397_11375314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300021420\|Ga0210394_10041618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4049	Open in IMG/M
3300021432\|Ga0210384_10856386	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300021433\|Ga0210391_10957237	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300021474\|Ga0210390_10740182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300021474\|Ga0210390_10808932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300021477\|Ga0210398_10811711	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300021479\|Ga0210410_10814334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300021559\|Ga0210409_10565080	Not Available	1004	Open in IMG/M
3300022522\|Ga0242659_1017485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300022557\|Ga0212123_10190243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300022721\|Ga0242666_1029243	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300024220\|Ga0224568_1004935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1297	Open in IMG/M
3300025404\|Ga0208936_1036816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300025414\|Ga0208935_1036091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300025854\|Ga0209176_10163896	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300025911\|Ga0207654_10390242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300025922\|Ga0207646_10185166	Not Available	1881	Open in IMG/M
3300025928\|Ga0207700_11468735	Not Available	605	Open in IMG/M
3300026309\|Ga0209055_1307272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026879\|Ga0207763_1016149	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300027063\|Ga0207762_1040899	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300027648\|Ga0209420_1079291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300027660\|Ga0209736_1029368	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300027701\|Ga0209447_10013301	All Organisms → cellular organisms → Bacteria → Acidobacteria	2357	Open in IMG/M
3300027727\|Ga0209328_10112444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300027727\|Ga0209328_10258912	Not Available	518	Open in IMG/M
3300027829\|Ga0209773_10022909	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300027869\|Ga0209579_10165459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300027898\|Ga0209067_10894942	Not Available	521	Open in IMG/M
3300027905\|Ga0209415_10168228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium dankookense	2151	Open in IMG/M
3300027905\|Ga0209415_10913881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300028020\|Ga0265351_1026442	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300028776\|Ga0302303_10060228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300028798\|Ga0302222_10406709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300028863\|Ga0302218_10061700	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300028906\|Ga0308309_10526701	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300029903\|Ga0247271_117837	Not Available	863	Open in IMG/M
3300030659\|Ga0316363_10285411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300030659\|Ga0316363_10366653	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300030743\|Ga0265461_11109146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	801	Open in IMG/M
3300031233\|Ga0302307_10119917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300031235\|Ga0265330_10305079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300031344\|Ga0265316_10016707	All Organisms → cellular organisms → Bacteria	6359	Open in IMG/M
3300031708\|Ga0310686_100507615	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300031708\|Ga0310686_104638444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300031715\|Ga0307476_10919945	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300031718\|Ga0307474_10428451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1032	Open in IMG/M
3300031754\|Ga0307475_10502367	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031823\|Ga0307478_11016312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031962\|Ga0307479_10800501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300032180\|Ga0307471_100656587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300032783\|Ga0335079_10126737	All Organisms → cellular organisms → Bacteria → Acidobacteria	2880	Open in IMG/M
3300032828\|Ga0335080_10982675	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300032898\|Ga0335072_11293464	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300033826\|Ga0334847_007050	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300033982\|Ga0371487_0038509	All Organisms → cellular organisms → Bacteria → Acidobacteria	2926	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.94%
Host-Associated	Host-Associated	4.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.67%
Aquatic	Environmental → Aquatic	16.26%
Plants	Host-Associated → Plants	4.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.98%
Freshwater	Environmental → Aquatic → Freshwater	14.63%
Peat	Environmental → Terrestrial → Peat	4.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.97%
Loam	Environmental → Terrestrial → Soil → Loam	18.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12650J13346_10069431	3300001159	Forest Soil	MSRVFGLLSVVIVMAAGMYIYSKQAQSSSAAAGANSPKAAINITGVRGDLISIATSERRYFATEGKYASL
JGI12679J13547_10003932	3300001174	Forest Soil	MGRLFGFLSTVIVMAIGMYIYSTQVEGTSAAAGTNSPQAAISITGVRS
JGI12635J15846_102894342	3300001593	Forest Soil	MGRVFGFLGVVIVLAIGVYVYSKQVQSSSAPGANTPKAAIIITGVRSDLISIA
JGI12627J18819_101435442	3300001867	Forest Soil	MGRLFGFLSTVIVMAVGMYIYSKQVEGSSAAAGTNSPQAAISITGVRSDLIS
JGIcombinedJ26739_1010041042	3300002245	Forest Soil	MGRIFGFLSVVIVMGIGMYLYSKQMQSSSAAAGATSPQAAINITGVKN
Ga0062384_1002324161	3300004082	Bog Forest Soil	MGRVFGFLSVVIVLGIGMYIYSRQAQSSSAAAGANNPKAAINITGVKTDLIGIASAER
Ga0062387_1016437792	3300004091	Bog Forest Soil	MGRVFSFLSVVIVLGIGMYVYSRQAQSSSAAAGASNPKAAINITGVKSDLIGIASAER
Ga0058882_10142022	3300004121	Forest Soil	MGRLFGFLSVVVVLGIGMYIYSRQAQSSSAPAGTNNPKAAINITGVKSDLISIATAERRYYA
Ga0062595_1017564652	3300004479	Soil	MSRLFGFLSVVIVMAAGLYIYSRQVQSTSAAMGTNNPKAAIN
Ga0070731_100088031	3300005538	Surface Soil	MGRIFGFLSIVIVLGAGMYIYSKQAQSSSALAGANNPKAAINITGVKTDLINIAGAERRYFATEGKYATLDELISTNY
Ga0070733_110557561	3300005541	Surface Soil	MRNVFGLLSIVIVMAIGMYIYSKQAQSSSSLAGANNPKAAINITGVKSDLVSIASAERRYFATEGKYASFDELISSNTITVVRQRPPYTYDVQTS
Ga0070695_1014657892	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIFGFMSVMIAMAVGIYLYAHQAQSSSAAAGVNNPKAAIDITGVRTDLMTIAQ
Ga0068855_1022058453	3300005563	Corn Rhizosphere	MSRLFGFLSVIIVMAAGLYIYSRQVQSTSAATGTNNPKSAINITGVRTDLMT
Ga0070761_102406042	3300005591	Soil	MSRLFGFLSVVIVMAIGMYIYSQQVQGASAAAGASNPQAAINITG
Ga0070762_112251691	3300005602	Soil	MGRVFGFLSLVIALGVGMYIYSRQAQSSSAAAGASNPKAAINITGVKSDLIGIASAERLY
Ga0066790_103266301	3300005995	Soil	MRGIFGFLSIIIVLGVGMYIYSKQAQSSSAIAGATNPQAAINI
Ga0070717_1000126615	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLLGFISVVIVMGIGMYIYSKQVQSTSAAAGTNSPQAAINITGVRNDLVS
Ga0070717_106416063	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGRLFGFLGVVVVLAIGMYVGSKQLQSSSAPAGANTPKAAINITG
Ga0070765_1008864542	3300006176	Soil	MSRLFGFLSVIIVMGIGMFIYSKQMQSSSAQAGASNPQGAINITG
Ga0070765_1017024981	3300006176	Soil	MGRLFGFLGVVIALAAGMYVYSRQAQSSSAAAGANNPQAAI
Ga0079222_113286703	3300006755	Agricultural Soil	MGRIFGFMSVMIAMAVGIYLYAHQAQSSSAAAGVNNPKAAID
Ga0066660_116201492	3300006800	Soil	MGRLFGFLSVVIVMAAGMYIYSRQVQSSSAPAGANSPKAAINI
Ga0116220_106124661	3300009525	Peatlands Soil	MGKIFGFLTLVIVMGVGMYIYSKEVQSSSAAAGANNPKAAVNITGVKSDLLSIATSERQYYATEGKYASFDELVSNNYMGVSKQRPPYSYEIQTSSS
Ga0116217_101792023	3300009700	Peatlands Soil	MSRLFGFLSVIIVMAIGMYIYSKQIQSTSAEAGASSPQGAINITGVKSDLISIASAERRYFATEG
Ga0116134_13079871	3300009764	Peatland	MGRLFGFLSVVVVLGVGMYVYSRQAQSSSAAAGANSPKAAIRITGVKSDLISIATTER
Ga0126380_101458811	3300010043	Tropical Forest Soil	MGRLFSFIGIVTVMAVGVYIYARQSQSSSAVAGVNNPKAAINITAVRSDLMTIAQAERGYFPLEGKTDPLDE
Ga0099796_101071181	3300010159	Vadose Zone Soil	MGRLVGFVSVVIVLAIGMYIYSQQLQSSSAPAGANTPKAAINITGV
Ga0136449_1002319211	3300010379	Peatlands Soil	MSRLFGFLSVVIVMAIGMYIYSKQMQSSSAEAGATNPQGAINITGVKSDLISIASAERRYFATEGKY
Ga0150983_143404931	3300011120	Forest Soil	MGRLFSFIGLLVVAGAGMYIYAHQAESSSAATGTNNPKAAINITGVRSDLMTIAQAERG
Ga0137392_104480821	3300011269	Vadose Zone Soil	MGRLFGFFSVVIVLAIGVYVYSQQLQSSSAPAGANTPKAAINITGVRSD
Ga0137389_110018411	3300012096	Vadose Zone Soil	MSRLFSFLSVIIVMAVGMYIYSQQIQSSSAPTGANTPKAAINITGVKSDLMSIASAERRYFATEGKYAS
Ga0137379_103668292	3300012209	Vadose Zone Soil	MSRLFSFLSVIIVMAVGMYIYSQQIQSSSAPTGANTPKA
Ga0137387_103264521	3300012349	Vadose Zone Soil	MFGFLSVVIVLAVGMYLYSKQVQSTSAPAGANTPQGAINITGVKSDLIS
Ga0137384_106480721	3300012357	Vadose Zone Soil	MSRLFSFLSVIIVMAVGMYIYSQQIQSSSAPTGANTPKAAINITGVKSDLMSIASAERRYFATEGKYASFDELISSNTMTIVRQRPPYTYDVQTSS
Ga0137395_104911431	3300012917	Vadose Zone Soil	MGRLFGFLSLVIVMAIGMYLYSREMQNSSAAAGANSPKAAINITGVRSD
Ga0137395_105516341	3300012917	Vadose Zone Soil	MGRLVGFVSVVIVLAIGVYVYSQQLQSSSAPAGANTPKAAINITGVRSDLIS
Ga0137396_109654751	3300012918	Vadose Zone Soil	MGRVFGFLGVVVALAIGMYVYSKQLQSSSAPAGANTPKAAINITGVRSDLISIAT
Ga0137394_104904482	3300012922	Vadose Zone Soil	MGRMFGFLGVVIALAVGMYVYSRQAQSSAAAAGANNPQAAINITGVRSDLISIATAERRYFATEGKYASFDELISTHY
Ga0137416_113989241	3300012927	Vadose Zone Soil	MGRLVGFVSVVIVLAIGMYVYSQQLQSSSAPAGANTPK
Ga0137407_108510831	3300012930	Vadose Zone Soil	MGRLFGFLGIVIALAVGMYVYSRQVQSSAAAAGANNPQAAINITGVRSDLIS
Ga0181531_106074712	3300014169	Bog	MSRLFGFLSVVIVMAIGMYIYSQRVQGASATAGATNPQA
Ga0137420_10207702	3300015054	Vadose Zone Soil	MGRVFGFLGVVVALAIGMYVYSKQLQSSSAPAGANTPKAAINITGVRSDLISLATA
Ga0182005_11725533	3300015265	Rhizosphere	MNRVFGFLSVVIVMAAGLYIYSRQVQSTSAATGTNNPKAAINITGVRTDLM
Ga0187814_101664121	3300017932	Freshwater Sediment	MSRLFGFLSLVIVLAAGMYIYSRQAQSSSSAAGANSPKAAINITGVRSDLMVIAQ
Ga0187854_104145651	3300017938	Peatland	MGRLFGFLSVVIVLGVGMYIYSRQAQSSSAAAGANSPKAAINITGVRAD
Ga0187819_102176233	3300017943	Freshwater Sediment	MSRMFGFISVIIVMAIGMYIYSKQIQSTSAEAGASSPQGAINITGVRSDLVSIASA
Ga0187819_104611223	3300017943	Freshwater Sediment	MSRIFGFLSVVIVLAAGMYIYSRQAQSSSAAVGANSPKAAINITGVRSDLMVIAQAERGYFA
Ga0187817_102590491	3300017955	Freshwater Sediment	MGRIFGFLSVIIVMGAGMYIYSRQAQSSSAGLGANSPKAAINITG
Ga0187778_100262711	3300017961	Tropical Peatland	MRRIFGFLSIVIVLGVGFYIYTKQAQSSSSTAGANSPKAAISITGVRGDLMSIAQAER
Ga0187781_106830191	3300017972	Tropical Peatland	MGRLFGFVGLVAALAVGMYIYSKDIQSTSATAGTNNPKAA
Ga0181520_106910232	3300017988	Bog	MSRLFGFLSVVIVMAIGMYIYSQQVQGASATAGASNPQAAINITGVKSDLISIASAERRYYATEGKYASLLELISTNSVSVARQ
Ga0187816_100910051	3300017995	Freshwater Sediment	MSRMFGFISVIIVMAIGMYIYSKQIQSTSAEAGASSPQGAINITGVRSDLVSIASAERRYFATEGKYASFDDLISTNYITVARQRPPYSY
Ga0187882_12272351	3300018021	Peatland	MGRLFGFLSVVIVLGVGMYIYSRQAQSSSAAAGANSPKAAINITGVRADLISIATAERQYYASEAKYAS
Ga0187869_101509061	3300018030	Peatland	MGRLFGFLSIVIVLAIGMYIYSRQVQNSSAPAGANNPKAAINITGVKSDLISIASAERR
Ga0187875_107362172	3300018035	Peatland	MSRLFGFLSVVIVMAIGMYIYSQQVQGASATAGATNPQAAINITGVKS
Ga0187772_100564541	3300018085	Tropical Peatland	MSRLLGILGLVIALAIGMYIYSRQVQSISSTTGVKNPKTAVSITGVRADL
Ga0187772_110084111	3300018085	Tropical Peatland	MGRLFGFVGLLAALAVGMYIYAKQAQTSSAAIGANNPKAAVNIVGVRNDLMSIAQAERGY
Ga0187771_107656613	3300018088	Tropical Peatland	MSRIFGFLSIVIVLGVGFYIYTKQAQSSSSAAGANSPKAAINITGVRSDLMSIATAERGYFASE
Ga0210403_102787121	3300020580	Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATNPAGAINITGVKSDLISIASAERRYFATEGKYT
Ga0210401_100558991	3300020583	Soil	MSRLFSFLSIIIVMAAGMYIYSRQAQDSSAIVGANN
Ga0210404_103040551	3300021088	Soil	MRSVLGLLSIVIVMAIGMYIYSRQAQNSSALAGANNPKAAINITGVKSD
Ga0210400_106327713	3300021170	Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATN
Ga0210405_103407911	3300021171	Soil	MGRLFGFISVVIVLGVGMYIYSKQAQSSSAEAGANNPKAAINITGVRSDLISIATTERRY
Ga0210408_111791761	3300021178	Soil	MSRLFSFLSIIIVMAAGMYIYSRQAQDSSAIAGANNPKAAINITAVRTDLITIAQAER
Ga0210388_100194986	3300021181	Soil	MGRAFGFLSVVAVLAVGMYVYSRQAQSSSAAAGVNNPKAAV
Ga0210388_103892811	3300021181	Soil	MGRLFGFLGVVIALAAGMYVYTRQAESSSALAGANNPKAAINLTGVKSDLISIGTSERRYFASE
Ga0210397_113753142	3300021403	Soil	MGRMFGFLSVIIVMAIGMYIYSKQMQSTSAEAGASTPQGAINITGVKTDLMTIASAERRYFATEGK
Ga0210394_100416184	3300021420	Soil	MSRLFGFLSVIIVMGIGMFIYSKQMQSSSAQAGASNPQGAI
Ga0210384_108563861	3300021432	Soil	MGRIFGFLVLLVTVGVGIYLYAKQAQSSSAAAGASNPKAAINITGVRTDLMTIAQAERGY
Ga0210391_109572371	3300021433	Soil	MGRVFGLLGAVIALAAGMYVYSRQAQSASVAAGADNPKAAINITGVKGDLISIATSERRYYATEGKYASFEELISANYITVARQRPP
Ga0210390_107401821	3300021474	Soil	MGRMFGFLSVIIVMAIGMYIYSKQMQSTSAEAGASTPQGAINITGVKTDLMT
Ga0210390_108089322	3300021474	Soil	MSRLFGFLSIVIVMAIGMYIYSKQMQSTSAEAGATSPQGAINITGVKSDLMSIASAERRYFATEGKYASID
Ga0210398_108117111	3300021477	Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAETGATNPAGAINITGVKSDLISIASAERRYFATEGKYTSLDEL
Ga0210410_108143341	3300021479	Soil	MSRLFGFLSIVIVMAIGMYIYSKQMQSTSAEAGATSPQGAINITGVKSDLMSIASAERRYFATEGKYAS
Ga0210409_105650802	3300021559	Soil	MSRLFSFLSIIIVMAAGMYIYSRQAQDSSAIAGANNPKAAINITAVRTDLITIAQAERRYFA
Ga0242659_10174852	3300022522	Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATNPAGAINITGVKSDLISIASAERRYFA
Ga0212123_101902433	3300022557	Iron-Sulfur Acid Spring	MGRLFGFISVVIVLGVGMYIYSKQAQSSSAQAGANNPKAAINITGVRSDLISIATTERRYYATE
Ga0242666_10292432	3300022721	Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATNPAGAINITGVKSD
Ga0224568_10049351	3300024220	Plant Litter	MGRIFGILGAVIVLGIGIYIGSMQMQSSSAAAGANNPKAAINITGVK
Ga0208936_10368162	3300025404	Peatland	MGRLFGFLSVVVVLGVGMYVYSRQAQSSSAAAGANSPKAAIRI
Ga0208935_10360912	3300025414	Peatland	MGRLFGFLSVVIVLGVGMYIYSRQAQSSSAAAGANSP
Ga0209176_101638961	3300025854	Arctic Peat Soil	MRGIFGFLSIIIVLGVGMYIYSKQAQSSSAIAGATNPQAAINITGVKSDLIS
Ga0207654_103902421	3300025911	Corn Rhizosphere	MSRLFGFLSVVIVMAAGLYIYSRQVQSTSAAMGTNNPKAAINI
Ga0207646_101851661	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLFSFLTVIIVMAVGMYIYSQQIQSSSAPTGANTPKAAI
Ga0207700_114687351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLFGFLSVVIVMAAGLYIYSRQVQSTSAAMGTNNPKAAINITGVRTDLMTI
Ga0209055_13072721	3300026309	Soil	MGRLFGFLGVVIVLAIGMYVYSKQVQSSSAPAGANTPKAAINI
Ga0207763_10161493	3300026879	Tropical Forest Soil	MRVFGFLGLVIALAVGMYIYSKQAQSSSAAAGANNPKAAINITGV
Ga0207762_10408991	3300027063	Tropical Forest Soil	MRVFGFLGLVIALAVGMYIYSKQAQSSSAAAGANN
Ga0209420_10792911	3300027648	Forest Soil	MGRIFGFLSVVIVLGVGMYIYSRQAQSSSAEAGANNPRAAINITAVRSDLISI
Ga0209736_10293681	3300027660	Forest Soil	MGRVFGFLSVVIVLAIGMYIFSKQAQSSSAAAGANSPKAAINITGVRSDL
Ga0209447_100133014	3300027701	Bog Forest Soil	MGRAFGFLSVVVVLAVGMYVYSKQAQSSSAAAGTNNPKAAINL
Ga0209328_101124442	3300027727	Forest Soil	MGRLFGFLSVVIVMAIAMYLYSKQATTSSAAAGANNPQGAINITGV
Ga0209328_102589121	3300027727	Forest Soil	MSRIFGFLSLVMVMGIGMYIYSRQATSSSAAAGANNPQAAVNITGVRSDLTTIAQA
Ga0209773_100229091	3300027829	Bog Forest Soil	MGRVFSFLSVVIVLGIGMYVYSRQAQSSSAAAGASNPKAAINITGVKSDL
Ga0209579_101654592	3300027869	Surface Soil	MGRIFGFLSIVIVLGAGMYIYSKQAQSSSALAGANNPKAAINITGVKTDLINIAGAERRYFATEGKYATLDELISTNYVSV
Ga0209067_108949421	3300027898	Watersheds	MSRMFGFLGLVIAMAIGMYIYSKQMQGTSAQAGAANPQ
Ga0209415_101682281	3300027905	Peatlands Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATNPAGAINITGVKSDLISIASAERRYFATEAKY
Ga0209415_109138811	3300027905	Peatlands Soil	MSRLFGFLSVVIVMAIGMYIYSKQMQSSSAEAGATNPQGAINITGVKSDLISIASAERRYFATEGK
Ga0265351_10264422	3300028020	Soil	MGRVFGFLSVVIALAVGMYVYSRQAQSSSAAAGANNPKAAIN
Ga0302303_100602281	3300028776	Palsa	MGRVFGFLGVVIVLSIGMYVYSRQAQSSSAAAGTNNPKAAINI
Ga0302222_104067091	3300028798	Palsa	MGRLFGFISVVIVLGVGMYVYSRQAQSSSAEAGANNPKAAINITAVRSDLISIATTE
Ga0302218_100617002	3300028863	Palsa	MSRLFGFLSAVIVMAIGMYIYSQQVQSASATAGASNPQAAINVTGVKSDLINIASAE
Ga0308309_105267011	3300028906	Soil	MGRAFGFLSVVAVLAVGMYVYSRQAQSSSAAAGVNNPKAAVNLTGVKSDLIGIASAE
Ga0247271_1178371	3300029903	Soil	MSRMFGFLSLVIVLGIAMYIYSRDAQNSSAAAGANNPQAAINITGVKSDLI
Ga0316363_102854112	3300030659	Peatlands Soil	MSRLFGFLSVIIVMAIGMYIYSKQMQSSSAEAGATNPAGAINITGVKSDL
Ga0316363_103666532	3300030659	Peatlands Soil	MSRLFGFLSVIIVMAIGMYIYSKQIQSTSAEAGASSPQGAINITG
Ga0265461_111091462	3300030743	Soil	MGRLFGFLSVVIVLAVGMYIYSRQVQSSSAPAGANSPRAAI
Ga0302307_101199171	3300031233	Palsa	MGRLFGFISVVIVLGVGMYIYSKQAQSSSAQAGANNPKAAINITGVRSDLISIATTERRY
Ga0265330_103050791	3300031235	Rhizosphere	MGRLFGFLSVIIVMAIGMYIYSKQIQSTSAEAGASTPQ
Ga0265316_100167071	3300031344	Rhizosphere	MGRLFGFLSVIIVMAIGMYIYSKQIQSTSAEAGASTPQGAINITGVKTDLMTIASAERRYFATEGKYAALDDLISTNYITVA
Ga0310686_1005076153	3300031708	Soil	MGRIFGFISVVVVMAVALYIFSKQAQSSSAAAGANSPKAAINITGVRSDLISIASSERRYFATEGK
Ga0310686_1046384442	3300031708	Soil	MGRLFGFLSVVVVLGIGMYIYSRQVQSSSAPAGANNPKAAINITGVKSDL
Ga0307476_109199452	3300031715	Hardwood Forest Soil	MSRLFGFLSVIIVMGVGMYIYSKQVQSTSAVAGANS
Ga0307474_104284513	3300031718	Hardwood Forest Soil	MGRIFGFLSVVIVMGIGMYLYSKQMQSSSAAAGAT
Ga0307475_105023672	3300031754	Hardwood Forest Soil	MGRLFGLLGVVIVLAIGMYVYSKQVQSASAPAGANT
Ga0307478_110163121	3300031823	Hardwood Forest Soil	MGRIFGFLSVVIVMGVGMYIYSRQATSSSAAAGANNPQAAVNITGVRSDLTSIAQAERRYFATEGKYASFDELV
Ga0307479_108005013	3300031962	Hardwood Forest Soil	MGRIFGFLSVIIVLGAGMYIYSRQAQSSSAALGANSPKAAINITGVRT
Ga0307471_1006565874	3300032180	Hardwood Forest Soil	MGRLLGLLGVVISLAIGMYIYSRQMESSSTTAGANNPKAAINITGVRSDLISIASAE
Ga0335079_101267371	3300032783	Soil	MGRVFGFLGVIIVLGVGMYIYSRQAQSSSAAAGTNSPKAAINITGVRTDLMTIAQAERGYFALEGKYGSLD
Ga0335080_109826753	3300032828	Soil	MSRVFGFLSIVIVLGLGFYIYTKQAQSSSGTAGTNSPKAAINITGVRSDLMSIATAE
Ga0335072_112934642	3300032898	Soil	MSRVFGFLSVVIVLAVGMYIYMQQMQSSSAAAGANNPKA
Ga0334847_007050_1_132	3300033826	Soil	MSRLFGFLSVVIVLAIAMYIYSKQMQSSSAQAGANNPQAAINIT
Ga0371487_0038509_2717_2926	3300033982	Peat Soil	MGRAFGFLSVVIVLAVGMYIYSRQAQSSSAAAGANSPKAAINITGVRADLISIATAERQYYASEAKYASL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences