Metagenome / Metatranscriptome Family F070365

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	93 residues
Representative Sequence	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA
Number of Associated Samples	74
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.79 %
% of genes near scaffold ends (potentially truncated)	27.64 %
% of genes from short scaffolds (< 2000 bps)	65.04 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.106 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (31.707 % of family members)
Environment Ontology (ENVO)	Unclassified (57.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (93.496 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.39% β-sheet: 0.00% Coil/Unstructured: 51.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF06736	TMEM175	4.88
PF07883	Cupin_2	4.07
PF07589	PEP-CTERM	2.44
PF13545	HTH_Crp_2	1.63
PF12836	HHH_3	1.63
PF07366	SnoaL	1.63
PF00072	Response_reg	0.81
PF00106	adh_short	0.81
PF13561	adh_short_C2	0.81
PF00149	Metallophos	0.81
PF14085	DUF4265	0.81
PF08281	Sigma70_r4_2	0.81
PF03167	UDG	0.81
PF04454	Linocin_M18	0.81
PF10509	GalKase_gal_bdg	0.81
PF03544	TonB_C	0.81
PF09722	Xre_MbcA_ParS_C	0.81
PF13466	STAS_2	0.81
PF02954	HTH_8	0.81
PF12728	HTH_17	0.81
PF12706	Lactamase_B_2	0.81
PF11453	DUF2950	0.81
PF02782	FGGY_C	0.81
PF01381	HTH_3	0.81
PF01066	CDP-OH_P_transf	0.81
PF01255	Prenyltransf	0.81
PF00437	T2SSE	0.81
PF00069	Pkinase	0.81
PF13366	PDDEXK_3	0.81
PF12844	HTH_19	0.81
PF00857	Isochorismatase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	4.88
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.25
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.81
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.81
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.81
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.81
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.81
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.81
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.81
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
All Organisms	root	All Organisms	30.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
cellular organisms	root	All Organisms → cellular organisms	30.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.44 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.44 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.81 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.81 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.44 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.81 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.44 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.63 %
Candidatus Aminicenantes bacterium RBG_16_63_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_63_16	0.81 %
unclassified Spongiibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → unclassified Spongiibacteraceae	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.44 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.63 %
gamma proteobacterium BDW918	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → unclassified Spongiibacteraceae → gamma proteobacterium BDW918	0.81 %
Candidatus Aminicenantes bacterium RBG_16_63_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_63_16	0.81 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1007248	Not Available	723	Open in IMG/M
3300001084\|JGI12648J13191_1000051	All Organisms → cellular organisms → Bacteria → Acidobacteria	15023	Open in IMG/M
3300001151\|JGI12713J13577_1000028	All Organisms → cellular organisms → Bacteria	57220	Open in IMG/M
3300001471\|JGI12712J15308_10002992	All Organisms → cellular organisms → Bacteria	4943	Open in IMG/M
3300001546\|JGI12659J15293_10080948	Not Available	712	Open in IMG/M
3300001593\|JGI12635J15846_10074833	Not Available	2494	Open in IMG/M
3300001593\|JGI12635J15846_10842680	Not Available	525	Open in IMG/M
3300003352\|JGI26345J50200_1006538	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300003367\|JGI26338J50219_1007767	Not Available	859	Open in IMG/M
3300003505\|JGIcombinedJ51221_10235561	Not Available	743	Open in IMG/M
3300003551\|Ga0005498J51100_126587	Not Available	553	Open in IMG/M
3300004080\|Ga0062385_10313044	Not Available	905	Open in IMG/M
3300004082\|Ga0062384_100311362	Not Available	982	Open in IMG/M
3300004082\|Ga0062384_101292123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae → unclassified Spongiibacteraceae → gamma proteobacterium BDW918	534	Open in IMG/M
3300004091\|Ga0062387_100038962	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300004092\|Ga0062389_100877933	Not Available	1079	Open in IMG/M
3300004092\|Ga0062389_103815475	Not Available	566	Open in IMG/M
3300004099\|Ga0058900_1404711	Not Available	954	Open in IMG/M
3300004118\|Ga0058886_1005059	Not Available	1318	Open in IMG/M
3300004137\|Ga0058883_1560182	Not Available	1263	Open in IMG/M
3300004631\|Ga0058899_10001845	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300004631\|Ga0058899_10024019	Not Available	839	Open in IMG/M
3300004631\|Ga0058899_10166271	Not Available	645	Open in IMG/M
3300004631\|Ga0058899_10190782	Not Available	686	Open in IMG/M
3300004631\|Ga0058899_10192340	Not Available	934	Open in IMG/M
3300004631\|Ga0058899_11614755	Not Available	516	Open in IMG/M
3300004631\|Ga0058899_12114701	Not Available	643	Open in IMG/M
3300004635\|Ga0062388_101828147	Not Available	624	Open in IMG/M
3300005591\|Ga0070761_10010845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	5135	Open in IMG/M
3300005591\|Ga0070761_10020781	All Organisms → cellular organisms → Bacteria → Acidobacteria	3652	Open in IMG/M
3300005591\|Ga0070761_10062086	Not Available	2111	Open in IMG/M
3300005591\|Ga0070761_10102315	Not Available	1651	Open in IMG/M
3300005591\|Ga0070761_10247982	Not Available	1063	Open in IMG/M
3300005591\|Ga0070761_10333570	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300005602\|Ga0070762_10000571	All Organisms → cellular organisms → Bacteria → Acidobacteria	15814	Open in IMG/M
3300005602\|Ga0070762_10021437	Not Available	3376	Open in IMG/M
3300006176\|Ga0070765_100001000	All Organisms → cellular organisms → Bacteria	16854	Open in IMG/M
3300006176\|Ga0070765_100004202	All Organisms → cellular organisms → Bacteria	9336	Open in IMG/M
3300006176\|Ga0070765_100672561	Not Available	978	Open in IMG/M
3300010341\|Ga0074045_10194968	Not Available	1359	Open in IMG/M
3300010343\|Ga0074044_10769161	Not Available	629	Open in IMG/M
3300011120\|Ga0150983_11170985	Not Available	688	Open in IMG/M
3300011120\|Ga0150983_12277135	Not Available	978	Open in IMG/M
3300011120\|Ga0150983_12463373	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300011120\|Ga0150983_12704275	Not Available	551	Open in IMG/M
3300011120\|Ga0150983_13107569	Not Available	1041	Open in IMG/M
3300011120\|Ga0150983_14818511	Not Available	662	Open in IMG/M
3300019188\|Ga0184599_146632	Not Available	1075	Open in IMG/M
3300020579\|Ga0210407_11269954	Not Available	551	Open in IMG/M
3300020581\|Ga0210399_10554174	Not Available	953	Open in IMG/M
3300020582\|Ga0210395_10016700	All Organisms → cellular organisms → Bacteria	5400	Open in IMG/M
3300020582\|Ga0210395_10075482	All Organisms → cellular organisms → Bacteria → Acidobacteria	2482	Open in IMG/M
3300020583\|Ga0210401_10257983	Not Available	1603	Open in IMG/M
3300020583\|Ga0210401_11550707	Not Available	520	Open in IMG/M
3300021171\|Ga0210405_10002498	All Organisms → cellular organisms → Bacteria	19016	Open in IMG/M
3300021171\|Ga0210405_10676958	Not Available	799	Open in IMG/M
3300021180\|Ga0210396_10079208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2983	Open in IMG/M
3300021180\|Ga0210396_10327120	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300021181\|Ga0210388_10016425	All Organisms → cellular organisms → Bacteria	5940	Open in IMG/M
3300021181\|Ga0210388_10072952	All Organisms → cellular organisms → Bacteria → Acidobacteria	2897	Open in IMG/M
3300021181\|Ga0210388_10095799	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300021401\|Ga0210393_10025983	All Organisms → cellular organisms → Bacteria → Acidobacteria	4566	Open in IMG/M
3300021401\|Ga0210393_11140654	Not Available	629	Open in IMG/M
3300021405\|Ga0210387_10014894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6016	Open in IMG/M
3300021405\|Ga0210387_10046971	Not Available	3464	Open in IMG/M
3300021405\|Ga0210387_11120264	Not Available	686	Open in IMG/M
3300021405\|Ga0210387_11829664	Not Available	511	Open in IMG/M
3300021406\|Ga0210386_10027571	Not Available	4451	Open in IMG/M
3300021406\|Ga0210386_11597310	Not Available	541	Open in IMG/M
3300021420\|Ga0210394_11150224	Not Available	668	Open in IMG/M
3300021433\|Ga0210391_10000197	All Organisms → cellular organisms → Bacteria → Acidobacteria	71736	Open in IMG/M
3300021433\|Ga0210391_10011603	All Organisms → cellular organisms → Bacteria	7130	Open in IMG/M
3300021474\|Ga0210390_10395871	Not Available	1168	Open in IMG/M
3300021478\|Ga0210402_11649069	Not Available	568	Open in IMG/M
3300023030\|Ga0224561_1026800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300024225\|Ga0224572_1066530	Not Available	666	Open in IMG/M
3300026467\|Ga0257154_1007359	Not Available	1464	Open in IMG/M
3300027034\|Ga0209730_1023807	Not Available	669	Open in IMG/M
3300027066\|Ga0208236_1017875	Not Available	519	Open in IMG/M
3300027334\|Ga0209529_1002019	Not Available	2957	Open in IMG/M
3300027370\|Ga0209010_1000067	All Organisms → cellular organisms → Bacteria → Acidobacteria	41754	Open in IMG/M
3300027505\|Ga0209218_1002554	Not Available	2672	Open in IMG/M
3300027505\|Ga0209218_1068789	Not Available	726	Open in IMG/M
3300027545\|Ga0209008_1013938	Not Available	1894	Open in IMG/M
3300027575\|Ga0209525_1104727	Not Available	667	Open in IMG/M
3300027590\|Ga0209116_1003485	Not Available	3439	Open in IMG/M
3300027590\|Ga0209116_1108272	Not Available	610	Open in IMG/M
3300027619\|Ga0209330_1006717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2584	Open in IMG/M
3300027648\|Ga0209420_1000105	All Organisms → cellular organisms → Bacteria	53459	Open in IMG/M
3300027676\|Ga0209333_1117486	Not Available	721	Open in IMG/M
3300027729\|Ga0209248_10047439	Not Available	1322	Open in IMG/M
3300027737\|Ga0209038_10062195	Not Available	1119	Open in IMG/M
3300027767\|Ga0209655_10008602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_63_16	3475	Open in IMG/M
3300027767\|Ga0209655_10013540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2755	Open in IMG/M
3300027767\|Ga0209655_10051629	Not Available	1371	Open in IMG/M
3300027768\|Ga0209772_10024803	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300027853\|Ga0209274_10007670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	4881	Open in IMG/M
3300027853\|Ga0209274_10007914	All Organisms → cellular organisms → Bacteria → Acidobacteria	4808	Open in IMG/M
3300027853\|Ga0209274_10488948	Not Available	637	Open in IMG/M
3300027855\|Ga0209693_10404755	Not Available	659	Open in IMG/M
3300027884\|Ga0209275_10071798	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300027884\|Ga0209275_10368904	Not Available	806	Open in IMG/M
3300027895\|Ga0209624_10369488	Not Available	956	Open in IMG/M
3300028906\|Ga0308309_10000625	All Organisms → cellular organisms → Bacteria	22067	Open in IMG/M
3300028906\|Ga0308309_10001630	All Organisms → cellular organisms → Bacteria	13296	Open in IMG/M
3300028906\|Ga0308309_11696926	Not Available	536	Open in IMG/M
3300030740\|Ga0265460_10931584	Not Available	789	Open in IMG/M
3300030741\|Ga0265459_13185141	Not Available	574	Open in IMG/M
3300030913\|Ga0265759_109759	Not Available	539	Open in IMG/M
3300030949\|Ga0074031_1807834	Not Available	871	Open in IMG/M
3300031041\|Ga0265755_116043	Not Available	503	Open in IMG/M
3300031708\|Ga0310686_108582780	Not Available	690	Open in IMG/M
3300031708\|Ga0310686_113462978	Not Available	564	Open in IMG/M
3300031718\|Ga0307474_10694391	Not Available	804	Open in IMG/M
3300032515\|Ga0348332_14200434	Not Available	593	Open in IMG/M
3300034163\|Ga0370515_0174616	Not Available	919	Open in IMG/M
3300034163\|Ga0370515_0393006	Not Available	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.18%
Aquatic	Environmental → Aquatic	13.01%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.37%
Freshwater	Environmental → Aquatic → Freshwater	13.01%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	47.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.06%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	47.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.06%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	31.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	16.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.44%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300003551	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300019188	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031041	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10072482	3300001082	Forest Soil	MSDIKFVSWKEILLKTLGETDPEKLAQLVPEAELAMFTRQQELNDSPQHSEELSTMPIASEALRVVKRRITKPVVPASSTGNAARFANFVRRSGAA*
JGI12648J13191_10000515	3300001084	Forest Soil	MAELKLVSWKEILLRTLDETDPKKLAQLVPEAELALFKRQQELNDSPQHSEELSAMPIAAEALRVVKRRITKPLVLASSKGNGARFANFVRRSRIA*
JGI12713J13577_100002851	3300001151	Forest Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA*
JGI12712J15308_100029927	3300001471	Forest Soil	MSDIKFVSWKEILLKTLDETDPEQLARLVPEAELAMFKRQQELYNCPQDDEELSTMSVASEALRVVKRKIIKPRILESSKGNGARFSNFDRRSTSSSKYTTGIFSGHRHSFTNPQS*
JGI12659J15293_100809481	3300001546	Forest Soil	LFGSYGLCESGGDSLSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPVASEALRVVKRRIIKRDVLGPSKSDDARFVNSVRRSKTA*
JGI12635J15846_100748331	3300001593	Forest Soil	MGEIKSVSWEEIVLKTLDETNPLKLAQLVPEAALAMFKRELKLHDCPENSEELSAMSIASEALRVVKRRITKARLPGPSKGNGTRFANFVRRSRTA*
JGI12635J15846_108426801	3300001593	Forest Soil	MGDIKFVSWKEIVLKTLDETDSEKLAQLVPEAELAIFRRQQELYNRSQGDEELSTMPIASEALRVIKRRIIKPIVPPTPTGNGARFSNSVRSGKA*
JGI26345J50200_10065382	3300003352	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLARLVPEADLAMFKRRQELSDSPQDSEELSTMSVASEALRVVKRRIVKAVILGPSKGDDARFVKSVRRSETA*
JGI26338J50219_10077672	3300003367	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLARLVPEADLAMFKRRQELSDSPQDSEELSTMSVASEALRVVKRRIVKAVILGPSKG
JGIcombinedJ51221_102355612	3300003505	Forest Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIMKPGVPASSAGKGA
Ga0005498J51100_1265871	3300003551	Forest Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPKAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIIKPGVLASSAGKGARFADSVRRAGTG*
Ga0062385_103130441	3300004080	Bog Forest Soil	LSDLKFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELDDTPQNSEELSTMPVASEALRVVKRRIIKREVLGPPKADVARFVNSVRRAKTA*
Ga0062384_1003113622	3300004082	Bog Forest Soil	LGDLKFVSWKEILLKTLDETDPEKLAQLVPEAELAMFKRRQELPASPQNSEELSTMSVASEALRVVKRRIIKPGVLASSAGNGARFAYSVRRSGTG*
Ga0062384_1012921231	3300004082	Bog Forest Soil	LTDLKFVSWKEILLKILDETDPEKLAQLVPEADLAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRIIKRVVLGPSKADDARFVNSVRRSKSA*
Ga0062387_1000389624	3300004091	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLAGLVPEAELAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRITRAVVLGPAKGGDARFVNSARRLETA*
Ga0062389_1008779332	3300004092	Bog Forest Soil	LDETDPEKLARLVPEADLAMFKRRQELSDSPQDSEELSTMSVASEALRVVKRRIVKAVILGPSKGDDARFVKSVRRSETA*
Ga0062389_1028016272	3300004092	Bog Forest Soil	MTDLKFVSWEEIFLRIVEETDPEELARLVPDLELAMFKRELELRDNPQNSEELSTMCVASEALRVVKCRIIKPGVLVPSTGNGARFANSVRCSETV*
Ga0062389_1038154751	3300004092	Bog Forest Soil	LLKTLDETDPEKLAQLVPEAELAMFKRKLELRDSPENSEELSTMCVASEALRVVKRRTIKPGVLASSTGKGARFADSVLQYGTE*
Ga0058900_14047111	3300004099	Forest Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLLPEAELAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYARFVNSVRRSKTA*
Ga0058886_10050592	3300004118	Forest Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIIKPGVPASSAGKGARFADSVRRAGTG*
Ga0058883_15601822	3300004137	Forest Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIMKPGVPASSAGKGARFADSVRRAGTG*
Ga0058899_100018452	3300004631	Forest Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPVASEALRVVKRRIIKRDVLGPSKSDDARFVNSVRRSKTA*
Ga0058899_100240191	3300004631	Forest Soil	LSDLKFVSWKEILLKTLDETDAEKLARLVPEAELAMFKRRQELHVSPWSSEELSTMSVASKALRVVKRRIIKREVLGPS
Ga0058899_101662711	3300004631	Forest Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLLPEAELAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYARFVNSARRSKTA*
Ga0058899_101907821	3300004631	Forest Soil	LSDLKFVSWKEILVKTLDESDPEKLARLVPEAELAMFKRRQELSDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYARFMNSVRRSKTA*
Ga0058899_101923402	3300004631	Forest Soil	LSDLKFVSWKEVLLKTLDESDPEKLARLVPEAELAMFKRRQELSDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYARFANFARRSKSA*
Ga0058899_116147551	3300004631	Forest Soil	MTDLKFVSWKEIFLKIMDETDPDKLARLVPEAELAIFKRQQKLYNCPQHSEELSAMCVASEALRVVKHRITKPTVTGNPARFANFVRRSRIA*
Ga0058899_121147012	3300004631	Forest Soil	LARLVPEAELAMFKRRQELSDSPQNSEELSTMSAASEALRVVKRRIMTRPILGPSKGDYARFVNSARRSKTA*
Ga0062388_1018281472	3300004635	Bog Forest Soil	ARLVPEAELAMFKRRQELDDTPQNSEELSTMPVASEALRVVKRRIIKCKVLGPSKAEDARFVNSVQRCKTA*
Ga0070761_100108454	3300005591	Soil	MSDIKFVSWKEILLKTLDETDPEKLARLVPEAELAIFRRHQELCGSPQNSAELSTMPIASEALRVVKRRITKPVVLASSTGNAARFANFVRRSGTA*
Ga0070761_100207818	3300005591	Soil	MSTLLIVRRERVKGGVMSDLKFVSWKEIFLKTLDETDREKLARLVPEAELAIFERQQKLYSCPQHSEELSAMCVASEALRVVKHRIFKPRVLESPKGNSARFANFVRRSGTA*
Ga0070761_100620862	3300005591	Soil	LSDIKFVSWKEILLKTLDETDPEKLAQLVPEAELAMFKRELELRDSPQNSEELSTMCVASEALRVVKRRTIRPGVLASSTGNGA*
Ga0070761_101023153	3300005591	Soil	LLKTLDETDPEKLARLVPEAELAMFKRRQELNDTPQNSEELSTMPVASEALRVVKRRITTGAVLRPSKGDAARFVDSVRRSKTA*
Ga0070761_102479822	3300005591	Soil	LSDLKFVSWKEILLKTLDETDAEKLARLVPEAELAMFKRRQELHVSPWSSEELSTMSVASKALRVVKRRIIKREVLGPSRGNDARFV
Ga0070761_103335701	3300005591	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREALGPSTGNNARFANFVRRSGTA*
Ga0070762_100005716	3300005602	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREALGPSRGNNARFANFVRRSGTA*
Ga0070762_100214374	3300005602	Soil	MLIAMSDIKFVSWKELLLKALGETDPEKLAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVVKRRITKPVAPASSTGNAARFANFARRSGSA*
Ga0070765_10000100015	3300006176	Soil	MSDIKFVSWEEIVLKTLDETDLEKLAQLVPEAELAMFKRGKELYNCLQHNEELSTMSVASEALRVVKRRITTPVVLASSAGGGARSANFVRRSGTA*
Ga0070765_1000042023	3300006176	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLIPEAELAMFKRRQELSDSPQNGEELSSMSVASEALRVVKRRIMTRPVLGPSKSDDPRFVNSVRRSKTA*
Ga0070765_1006725612	3300006176	Soil	MSDIKFVSWKELLLKALGETDPEELAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVVKRRITKPVAPASSTGNAARFANFARRSGSA*
Ga0074045_101949682	3300010341	Bog Forest Soil	LSDLKFVSWKEILVKTLEETDPEKLARLVPEAELAMFKRRQELDDSPQNREELSTMAVASEALRVVKRKITKSAVLGSSKAQGARSVNSARRSDGANVESGEA*
Ga0074044_101093502	3300010343	Bog Forest Soil	MNDIKLVSWGEIFLKTMDETDPEKLARLVPEAESAIFKRRQELNNCPQHSEELSTMCVAFEALRVVKHEIFKPISSPGEARQLLRSAS*
Ga0074044_107691612	3300010343	Bog Forest Soil	DLKFVSWKEMLRKTLDETDPDKLAQLVPAAELAIFKRRQQLYNSPQHSEELSTMCVASEALRVVKHRITTPSKGNGARFANFVRRPGTA*
Ga0150983_111709852	3300011120	Forest Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLVPEAELAMFKRRQELPDSPQNSEELSTMAVASEALRVVKRRIMTRPVLGPSKDDYARFVNSVRRSKTA*
Ga0150983_122771351	3300011120	Forest Soil	KEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIMKPGVPASSAGKGARFADSVRRAGTG*
Ga0150983_124633732	3300011120	Forest Soil	GDSLSDLRFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELRDGPQNSEELSTMHVASEALRVVKRRIIKAVVLGSSKGDDASFANSVRRSEPA*
Ga0150983_127042751	3300011120	Forest Soil	LSDLKLVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELSDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYA
Ga0150983_131075692	3300011120	Forest Soil	LHDLKFVSWKEILLKTLDEANPEKLARLVTEAELAMFQRRQELDVSPSNSEELSTMSVASEALRVVKRRIIKREVLGPSNADNPRFVNSLHRSKTA*
Ga0150983_148185112	3300011120	Forest Soil	ETDPEKLARLVPEAELAMFKRRQELSDSPQNSEELSTMSAASEALRVVKRRIMTRPILGPSKGDYARFVNSARRSKTA*
Ga0184599_1466321	3300019188	Soil	LSDLKFVSWKEIFVKTLDETDPEKLARLVPEAELAMFKRRQELPDSPQNSEELSTMSVASEAFRVVKRRIMTRPVLGPSKA
Ga0210407_112699541	3300020579	Soil	EKLAQLVSEVELAMFKRELELDDCSRPSEELSTMSIASEALRVLKRRITRPRVLEPSKGNGARFANFVRHPGVA
Ga0210399_105541742	3300020581	Soil	LNDLQFVSWKEILVKTLDETDPEKLARLVQETELAMFKRELELDNCPQHSEELSTMSVASEALRVVKRRIIKTEVLGPARGDDAPFVNSDRRSETA
Ga0210395_100167001	3300020582	Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPKAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIIKPGVLASSAGKGARFADSVRRAGTG
Ga0210395_100754824	3300020582	Soil	LRDIKFVSWKEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIMKPGVPASSAGKGARFADS
Ga0210401_1000760616	3300020583	Soil	MTDLKFVSWKEIFLEAVDEPDPEKLARVLPEAESAIFERQQELYNCPQHGEELSAMGIASEALRVIKHRIMRPTVIGNRTRFANFVRRPRIA
Ga0210401_102579832	3300020583	Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSTCNSEELSTMPIASEALRVVKRRIIKREVLSPSKGDDARFVDSARRSKTA
Ga0210401_115507071	3300020583	Soil	LSDNKFVSWKEILLETLDETDPEKLAQLVPEAELAIFKRQQELCHSPQNSEELSTMCVASEALRVVRRRIIKPGVLASSAGNGARFADSVRRAGTG
Ga0210405_100024985	3300021171	Soil	LSDIKFVSWKEILLETLDETDPEKLAQLVPEAELAMFKRQLELCHSPQNSEELSTMSVASEALRVVKRRIMKPGVPASSAGKGARFADSVRRAGTG
Ga0210405_106769581	3300021171	Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPVASEALRVVKRRIIKRDVLGPSKSDDARFVNSVRRSKTA
Ga0210396_100792087	3300021180	Soil	LHDLKFVSWKEILLKTLDEANPEKLARLVTEAELAMFQRRQELDVSPSNSEELSTMSVASEALRVVKRRIIKREVLGPSNADNPRFVNSLHRSKTA
Ga0210396_103271202	3300021180	Soil	MSDIQFVCWKEIFLKALDEADPEKLARLVPAAELAIFRRQQELCVNPQNSEERSTMCVASEALRVVKRRITKPLVLASPKGNPARF
Ga0210388_1001642510	3300021181	Soil	MGDIQFVSWEELVLKTLDETDPLKLAQLVPEAALAMFKRELELHNCPENSEELSAMSVASEALRVVKRRITKARLLKPSKGNSARFANFVRRSRTA
Ga0210388_100729524	3300021181	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREALGPSTGNNARFANFVRRSGTA
Ga0210388_100957994	3300021181	Soil	IPEAELAMFKRRQELDVSPWNSEELSTMPVASEALRVVKRRIIKRDVLGPSKSDDARFVNSVRRSKTA
Ga0210393_100259839	3300021401	Soil	KEILLKTLDEANPEKLARLVTEAELAMFQRRQELDVSPSNSEELSTMSVASEALRVVKRRIIKREVLGPSNADNPRFVNFLHRSKTA
Ga0210393_111406541	3300021401	Soil	LSDLKFVSWKEILLKTLDETDAEKLARLVPEAELAMFKRRQELHVSPWSSEELRTMSVASKALRVVKRRIIKREVLGPSRGNDARFVNFVRRSGTA
Ga0210389_107814341	3300021404	Soil	MSDIKFVSWEEIVLKTLNETDPLKLAQLVPEAYLAMFKRELELCESPQNSEELSTMSVAYEALRVLKHRITKPVVLASAASNSARFANSIPRSVTG
Ga0210387_100148942	3300021405	Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPIASEALRVVKRRIIKREVLSPSKGDDARFVDSARRSKTA
Ga0210387_100469712	3300021405	Soil	LNDLQFVSWKEILVKTLDETDPEKLARLVPETELAMFKRELELDNCPQHSEELSTMSVASEALRVVKRRIIKTEVLGPARGDDAPFVNSDRRSETA
Ga0210387_111202642	3300021405	Soil	LSDIKFVSWKEILLETLDEADAEKLARLVPEAELAMFKRQQELNNSPHHSEELSTMPIASEALRVVKRRITKPVVVASPTGNGARFANFVRRSGTA
Ga0210387_118296641	3300021405	Soil	LSVWLFGSYALCKSGGDSLSDLKFVSWKEVLLKTLDETDPEKLARLVPEAELAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRIMTRPVLGPSKDDYARFVNSARRSKTA
Ga0210386_100275711	3300021406	Soil	LSDLKFVSWKEILLKTLDETDAEKLARLVPEAELAMFKRRQELHVSPWSSEELSTMSVASKALRVVKRRIIKREVLGPSRGNDARFVNFVRRSGTA
Ga0210386_115973101	3300021406	Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSTCNSEELSTMPIASEALRVVKRRIIKREVLSPSKGDDARF
Ga0210394_111502241	3300021420	Soil	VSWKEILVKTLDETDPEKLARLVQETELAMFKRELELDNCPQHSEELSTMSVASEALRVVKRRIIKTEVLGPARGDDAPFVNSDRRSETA
Ga0210391_100001972	3300021433	Soil	MLIAMSDIKFVSWKELLLKALGETDPEELAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVVKRRITKPVAPASSTGNAARFANFARRSGSA
Ga0210391_100116034	3300021433	Soil	LSDLKFVSWKEILLKTLDETDAEKLARLLPEVELATFKRRQELHVSPWNSEERSTMSVASEALRVVKRRIIKREVLGPSRGNDARFVNFVRRSGTA
Ga0210390_103958712	3300021474	Soil	MSDIKFVSWEEIVLKTLNETDPLKLAQLVPEAYLAMFKRELELCESPQNSEELSTMSVAYEALRVLKHRITKPVVLASAASN
Ga0210402_116490691	3300021478	Soil	LNDLQFVSWKEILVKTLDETDPEKLARLVPETELAMFKRELELDNCPQHSEELSTMSVASEALRVVKRRIIKTEVLGPAKGDDAP
Ga0210409_112849531	3300021559	Soil	MTDLKFVSWKEIFLKAADELDLEKLARLLPEAELAIFKRQQELYNCPQHSEELNAMCIASEALRVIKHRFIKPTVI
Ga0224561_10268002	3300023030	Soil	FVSWKEILLKALDETDPEKLARHVPEAELAMFKRRQELDDSPENSEELSTMPVASEALRVVKRRIVKAAALRASKGDDGRFVNSVRRSKTA
Ga0224572_10665302	3300024225	Rhizosphere	LSDLKFVSWKEIFVKTLDETDPEKLARLVPEAELAMFKRRQELPDSPQNSEELSTMSVASEAFRVVKRRIMTRPVLGPSKADDARFVNSVRRSKTA
Ga0257154_10073592	3300026467	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELADIPQNSEELGTMPVASEALRVVKRRIMTRAVLGPSKRDAARFVDTVRRSKTA
Ga0209730_10238071	3300027034	Forest Soil	LHDLEFVSWKEILLKTLDEANPEKLARLVTEAELAMFQRRQELDVSPSNSEELSTMSVASEALRVVKRRIIKREVLGPSNADNPRFANCLHRSKTA
Ga0208236_10178751	3300027066	Forest Soil	LSDLKFVSWKEILLKTLDETDAEKLARLLPEVELATFKRRQELHVSPWNSEERSTMSVASEALRVVKRRIIKREVLGPSRGNDARFVNFVRRS
Ga0209529_10020195	3300027334	Forest Soil	LSDLKFVSWKEILLKTLDETDPETLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA
Ga0209010_100006720	3300027370	Forest Soil	MAELKLVSWKEILLRTLDETDPKKLAQLVPEAELALLKRQQELNDSPQHSEELSAMPIAAEALRVVKRRITKPLVLASSKGNGARFANFVRRSRIA
Ga0209218_10025541	3300027505	Forest Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA
Ga0209218_10687892	3300027505	Forest Soil	MSDIKFVSWKELLLKALGETDPEKLAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVVKRRITKPVAPASSTGNAARFANFARRSGSA
Ga0209008_10139382	3300027545	Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLAQLVPEAELAMFKRELELRDSPQNSEELSTMCVASEALRVVKRRTIRPGVLASSTGNGA
Ga0209525_11047271	3300027575	Forest Soil	MSDIKFVSWKEILLKTLDETDPEQLARLVPEAELAMFKRQQELYNCPQDDEELSTMSVASEALRVVKRKIIKPRILESSKGNGARFSNFDRRSTSSSKYTTGIFSGHRHSFTNPQS
Ga0209116_10034854	3300027590	Forest Soil	MAELKLVSWKEILLRTLDETDPKKLAQLVPEAELALFKRQQELNDSPQHSEELSAMPIAAEALRVVKRRITKPLVLASSKGNGARFANFVRRSRIA
Ga0209116_11082721	3300027590	Forest Soil	MSDLQFVCWKEIFLKALDETDPEKLARLVPAAELAIFKRQQELCDNPHNSEERSTMCIASEALRVVKRRITKPVVLPSSKGSPARFANFVRRPRTA
Ga0209330_10067171	3300027619	Forest Soil	EILLKTLDETDPEKLARLLPEAELAMFKRRQELPESAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA
Ga0209420_100010546	3300027648	Forest Soil	MSDIKFVSWKEILLKTLGETDPEKLAQLVPEAELAMFTRQQELNDSPQHSEELSTMPIASEALRVVKRRITKPVVPASSTGNAARFANFVRRSGAA
Ga0209333_11174861	3300027676	Forest Soil	MGDIKFVSWKEIVLKTLDETDSEKLAQLVPEAELAIFRRQQELYNRSQGDEELSTMPIASEALRVIKRRIIKPIVPPTPTGNGARFSNSVRSGKA
Ga0209248_100474391	3300027729	Bog Forest Soil	LSDLKFVSWKEILLETLDETDPEKLARLVPEAELAMFKRRQELDDTPQNSEELSTMPVASEALRVVKRRIIKCKVLGPSKAEDARFVNSVQRCKTA
Ga0209038_100621951	3300027737	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLARLVPEADLAMFKRRQELSDSPQDSEELSTMSVASEALRVVKRRIVKAVILGPSKGDD
Ga0209655_100086023	3300027767	Bog Forest Soil	LSDLKFVSWKDILLKTRDETDPEKLARLVPEAELAMFKRRQELDGTPQNSEELSTMPIASEALRVVKRRIIKREVLGLPKAHDARFVNSVERSKTA
Ga0209655_100135404	3300027767	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLARLVPEADLAMFKRRQELSDSPQDSEELSTMSVASEALRVVKRRIVKAVILGPSKGDDARFVKSVRRSETA
Ga0209655_100516292	3300027767	Bog Forest Soil	LSDLKFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELDDTPQNSEELSTMPVASEALRVVKRRIIKREVLGPPKADVARFVNSVRRAKTA
Ga0209772_100248033	3300027768	Bog Forest Soil	LSDIKFVSWKEILLKTLDETDPEKLAGLVPEAELAMFKRRQELPDSPQNSEELSTMSVASEALRVVKRRITRAVVLGPAKGGDARFVNSARRLETA
Ga0209274_100076704	3300027853	Soil	MSDIKFVSWKEILLKTLDETDPEKLARLVPEAELAIFRRHQELCGSPQNSAELSTMPIASEALRVVKRRITKPVVLASSTGNAARFANFVRRSGTA
Ga0209274_100079144	3300027853	Soil	MSTLLIVRRERVKGGVMSDLKFVSWKEIFLKTLDETDREKLARLVPEAELAIFERQQKLYSCPQHSEELSAMCVASEALRVVKHRIFKPRVLESPKGNSARFANFVRRSGTA
Ga0209274_104889481	3300027853	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELNDTPQNSEELSTMPVASEALRVVKRRITTGAVLRPSKGDAARFVDSVRRSKTA
Ga0209693_104047552	3300027855	Soil	DRPFMLIAMSDIKFVSWKELLLKALGETDPEKLAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVVKRRITKPVAPASSTGNAARFANFARRSGSA
Ga0209275_100717983	3300027884	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREALGPSRGNNARFANFVRRSGTA
Ga0209275_103689042	3300027884	Soil	LSDLKFVSWKEILLKTLDETDAEKLARLLPEVELATFKRRQELDVSPWNSEERSTMSVASEALRVVKRRIIKREVLGPSRGNDARFVNFVRRSGTA
Ga0209624_103694882	3300027895	Forest Soil	MLKAMSDIKFVSWKEILLETLRETDPGKLAQLVPEAELAMFKRQQELNHSPQHSEELSAMPIASEALRVIKRRITKTVAPASSTGNAARFANFVRRSGTA
Ga0308309_1000062510	3300028906	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLIPEAELAMFKRRQELSDSPQNGEELSSMSVASEALRVVKRRIMTRPVLGPSKSDDPRFVNSVRRSKTA
Ga0308309_1000163011	3300028906	Soil	MSDIKFVSWEEIVLKTLDETDLEKLAQLVPEAELAMFKRGKELYNCLQHNEELSTMSVASEALRVVKRRITTPVVLASSAGGGARSANFVRRSGTA
Ga0308309_116969261	3300028906	Soil	TLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPIASEALRVVKRRIIKREVLSPSKGDDARFVDSARRSKTA
Ga0265460_109315842	3300030740	Soil	LSDLKFVSWKEVLLKTLDETDPEKLARLIPEAELAMFKRRQELDVSPWNSEELSTMPIASEALRVVKRRIIKREVLSPSKCDDLRFVDSARRSKTA
Ga0265459_131851411	3300030741	Soil	LSDLKFVSWKEILLKTLDETDPETLARLLPEAELAMFKRRQELDVSPWNSEELSTMPIASEALRVVKRRIIKREVLSPSKGDDARFVDSARRSKTA
Ga0265759_1097591	3300030913	Soil	LLKALDETDPEKLARLVPEAELAMFKRRQELDDSPENSEELSTMPVASESLRVVERRIIKRAALGASNGDDARFEDSVRCSETA
Ga0074031_18078341	3300030949	Soil	LSDLKFVSWKEILLKTLDETDPETLARLLPEAELAMFKRRQELPDSAQNSEELSAMPIASEALRVVKRRIIKREALGPSTGNNARFANFVRRSGTA
Ga0265755_1160431	3300031041	Soil	LSDLKFVSWKEILLKTLDETDPEKLARLIPEAELAMFKRRQELPESAQNSEELSAMPIASEALRVVKRRIIKREVLGPSRGNNARFANFVRRSGTA
Ga0310686_1085458542	3300031708	Soil	MSDIKFVSWEEIVLKTLNETDPLKLAQLVPEAYLAMFKRELELCESPQNSEELSTMSVASEALRVLKRTITKPVVLASSARDGARFANFVRRSGAA
Ga0310686_1085827802	3300031708	Soil	MSDIEFLCWKEIFLKALEETDSEKLARLVPTAELAIFKRQQELCDNPPNSEELSALCVASEALRVVKRRITKPGVLGPSKGNAARFANFVRRSGIA
Ga0310686_1134629781	3300031708	Soil	DPEKLARLVPEAELAMFKRRQELDDTPQNSEELSTMPVASEALRVVKRRIIKREVLGPPKADVARFVNSVRRAKTA
Ga0307474_106943911	3300031718	Hardwood Forest Soil	LHDLKFVSWKEILLKTLDEADPEKLARLVTEAELAMFQRRQELDVSPWNSEELSTMSVASEALRVVKRRIIKREVLGPSNADNPRFVNSLHRSKTA
Ga0348332_142004341	3300032515	Plant Litter	FVSLGDPLSDLKFVSWKEILLKTLDETDPEKLARLVPEAELATFTRRQELDDSPENSEELSTMPVASESLRVVERRIIKRAALGASNGDDARFEDSVRCSETA
Ga0370515_0174616_469_759	3300034163	Untreated Peat Soil	MSDIQFLCWKEIFLKALEETDSEKLARLVPTAELAIFKRQQELCDDPHNSEELSALCVASEALRVVKRRITKLGVLGPSKGNAARFANFVRRSGTA
Ga0370515_0393006_247_537	3300034163	Untreated Peat Soil	MSDLKFVSWKEILLKTLDETDPEKLARLVPEAELAMFKRRQELDDTPQNSEELSTMPIASEALRVVKRRITKPVVLPSSTGNPARFAKFVRRSRTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences