NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070383

Metagenome / Metatranscriptome Family F070383

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070383
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 51 residues
Representative Sequence MLPATAAEFLQLQPVRGRLAVLGLRIIPLFAITALQRNDLSGHETNS
Number of Associated Samples 113
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.81 %
% of genes near scaffold ends (potentially truncated) 41.46 %
% of genes from short scaffolds (< 2000 bps) 97.56 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.179 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.756 % of family members)
Environment Ontology (ENVO) Unclassified
(21.138 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.911 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.67%    β-sheet: 0.00%    Coil/Unstructured: 49.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF00584SecE 29.27
PF03143GTP_EFTU_D3 13.01
PF03144GTP_EFTU_D2 4.07
PF02357NusG 3.25
PF03946Ribosomal_L11_N 1.63
PF00687Ribosomal_L1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG0690Preprotein translocase subunit SecEIntracellular trafficking, secretion, and vesicular transport [U] 29.27
COG2443Preprotein translocase subunit Sss1Intracellular trafficking, secretion, and vesicular transport [U] 29.27
COG0250Transcription termination/antitermination protein NusGTranscription [K] 3.25
COG0080Ribosomal protein L11Translation, ribosomal structure and biogenesis [J] 1.63
COG0081Ribosomal protein L1Translation, ribosomal structure and biogenesis [J] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.18 %
UnclassifiedrootN/A13.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10823395All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300001867|JGI12627J18819_10306622All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae639Open in IMG/M
3300002909|JGI25388J43891_1038654All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300004103|Ga0058903_1535833All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300004137|Ga0058883_1556893All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300004475|Ga0068969_1483047Not Available543Open in IMG/M
3300004604|Ga0068943_1002941All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005171|Ga0066677_10790537All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300005174|Ga0066680_10778626All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300005184|Ga0066671_10307755All Organisms → cellular organisms → Bacteria → Acidobacteria996Open in IMG/M
3300005332|Ga0066388_102089844All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300005436|Ga0070713_102252018All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005436|Ga0070713_102268801All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005437|Ga0070710_11316926All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005439|Ga0070711_100769988All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300005468|Ga0070707_101428153All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300005532|Ga0070739_10127525All Organisms → cellular organisms → Bacteria → Acidobacteria1386Open in IMG/M
3300005542|Ga0070732_11026178All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005552|Ga0066701_10940311All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300005559|Ga0066700_10897207All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300005586|Ga0066691_10538348All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300005598|Ga0066706_11314708All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005610|Ga0070763_10754915All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300005610|Ga0070763_10944022All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005764|Ga0066903_107164569All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300006028|Ga0070717_10887397All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300006028|Ga0070717_11614385All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300006175|Ga0070712_101166588All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300006854|Ga0075425_100911599All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300009011|Ga0105251_10505628All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300009038|Ga0099829_11743374All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009552|Ga0116138_1086841All Organisms → cellular organisms → Bacteria → Acidobacteria872Open in IMG/M
3300009552|Ga0116138_1114777All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300009631|Ga0116115_1145092Not Available603Open in IMG/M
3300010116|Ga0127466_1055523Not Available513Open in IMG/M
3300010361|Ga0126378_12933855All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300010366|Ga0126379_11461073All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300010396|Ga0134126_10452978All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300010396|Ga0134126_11674289Not Available699Open in IMG/M
3300010399|Ga0134127_13737124All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300010859|Ga0126352_1146923Not Available593Open in IMG/M
3300011043|Ga0138528_111788All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300011044|Ga0138545_131282All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300011049|Ga0138554_129758All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300011053|Ga0138531_114761All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300011063|Ga0138537_1059641All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300011090|Ga0138579_1113347All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300011120|Ga0150983_13387908All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300011120|Ga0150983_15498458All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012199|Ga0137383_10641370All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300012203|Ga0137399_10636201Not Available897Open in IMG/M
3300012205|Ga0137362_11782990All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7502Open in IMG/M
3300012208|Ga0137376_10475868Not Available1084Open in IMG/M
3300012208|Ga0137376_11796524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7503Open in IMG/M
3300012381|Ga0134026_1068504All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300012917|Ga0137395_11040172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7584Open in IMG/M
3300012923|Ga0137359_10230762All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1652Open in IMG/M
3300012927|Ga0137416_10963455All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300012955|Ga0164298_11356721All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300012971|Ga0126369_12607625All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300014494|Ga0182017_10881021Not Available539Open in IMG/M
3300014495|Ga0182015_10390107All Organisms → cellular organisms → Bacteria → Acidobacteria899Open in IMG/M
3300014498|Ga0182019_10201459All Organisms → cellular organisms → Bacteria → Acidobacteria1288Open in IMG/M
3300014657|Ga0181522_10119356All Organisms → cellular organisms → Bacteria → Acidobacteria1531Open in IMG/M
3300015374|Ga0132255_100641456Not Available1573Open in IMG/M
3300016702|Ga0181511_1375812All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300017822|Ga0187802_10423721All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300017823|Ga0187818_10502618All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300017930|Ga0187825_10367158All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300017936|Ga0187821_10503972All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300018019|Ga0187874_10348363All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae600Open in IMG/M
3300018020|Ga0187861_10316868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae665Open in IMG/M
3300018021|Ga0187882_1367041All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300019192|Ga0184603_101673All Organisms → cellular organisms → Bacteria → Acidobacteria805Open in IMG/M
3300019270|Ga0181512_1361671Not Available545Open in IMG/M
3300019273|Ga0187794_1597219All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300019275|Ga0187798_1147813All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300019787|Ga0182031_1279127All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300019787|Ga0182031_1451811All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1841Open in IMG/M
3300019888|Ga0193751_1066211Not Available1492Open in IMG/M
3300020004|Ga0193755_1190170Not Available594Open in IMG/M
3300020199|Ga0179592_10533691Not Available500Open in IMG/M
3300021088|Ga0210404_10047590All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2002Open in IMG/M
3300021403|Ga0210397_10669445All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300021407|Ga0210383_11470928All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300021478|Ga0210402_11789167All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300021479|Ga0210410_10854066All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300022510|Ga0242652_1053675All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300022557|Ga0212123_10765000Not Available585Open in IMG/M
3300022716|Ga0242673_1090510All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300023056|Ga0233357_1057334All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300023250|Ga0224544_1029028All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300025454|Ga0208039_1050592All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300025906|Ga0207699_11396212All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025916|Ga0207663_11651388All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300025929|Ga0207664_11908446All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300025929|Ga0207664_11928273All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300026277|Ga0209350_1112496All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300026322|Ga0209687_1014767All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2575Open in IMG/M
3300026474|Ga0247846_1046389All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae774Open in IMG/M
3300026527|Ga0209059_1170346All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300026871|Ga0207825_115775All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300027546|Ga0208984_1136462All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300027748|Ga0209689_1414213All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300027768|Ga0209772_10130290All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300027842|Ga0209580_10600605All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300027855|Ga0209693_10045434All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2160Open in IMG/M
3300027889|Ga0209380_10105727All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1629Open in IMG/M
3300029910|Ga0311369_10864593All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300029922|Ga0311363_11517650All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300029939|Ga0311328_10590976All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300030620|Ga0302046_10735480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium797Open in IMG/M
3300030730|Ga0307482_1047863All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300030849|Ga0075393_10987805All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae595Open in IMG/M
3300030998|Ga0073996_12439992Not Available503Open in IMG/M
3300031022|Ga0138301_1147903All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300031231|Ga0170824_101045775Not Available505Open in IMG/M
3300031234|Ga0302325_13025999All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300031469|Ga0170819_10092944All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300031469|Ga0170819_14788337Not Available767Open in IMG/M
3300031754|Ga0307475_11194707All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300032515|Ga0348332_13549499All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300033289|Ga0310914_11613418All Organisms → cellular organisms → Bacteria552Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.13%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.32%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.69%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.25%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.25%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.25%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.44%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.44%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.44%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.44%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.63%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.63%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.63%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.63%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.63%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.63%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.63%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.81%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.81%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004137Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004604Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010859Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011043Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011044Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011049Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 35 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011053Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012381Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300019192Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019273Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023056Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2EnvironmentalOpen in IMG/M
3300023250Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026474Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026871Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030849Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1082339533300001593Forest SoilMLAAPVAELLQFQPIRRRFAVLRRRIIPLFAITALQGNNFSGHKNS
JGI12627J18819_1030662233300001867Forest SoilMRRVLAAPAAELLLLDPVRCSFAVLHGRVIPLFALSTLQRNDFSGHKTKLLA
JGI25388J43891_103865443300002909Grasslands SoilMRRVLPATPAEFLXLXXIRSGFPVLGXRIIPLFAITALQRNDLSGHSAPSFFLCGAG
Ga0058903_153583333300004103Forest SoilMLPATLAEFLHLQPVRSGLPILGGRIVPLFAITALHRNNFSGH
Ga0058883_155689313300004137Forest SoilMLPAPLAKFLQLQPVRGRLPVLGGRIVPLFAITALYRNDLSGHENS
Ga0068969_148304723300004475Peatlands SoilEFLQFQPVRRGFPVLGSRIISLFALTALQRNDFSGHENSS*
Ga0068943_100294123300004604Peatlands SoilVRRMLPAAITEFLHLQPVRSRLPVLGGRIVPLFAIAALHRNNFSGHCSLHPS*
Ga0066677_1079053733300005171SoilMLPAPRAELLQLQAVRSRFPVLRGRIIPLFAITALQRNDLSGHSAPSFF
Ga0066680_1077862633300005174SoilMRRMLPAPPAEFLQLQAVRSRFPVLGSRIVPLFAITALQRNDLSGHSAPSFFLCG
Ga0066671_1030775513300005184SoilMLPATTAELLDLQPIRHCLPILGSRIISVFAFTALQRNDLSGHENSS
Ga0066388_10208984423300005332Tropical Forest SoilMRRMLAAPAAELLQLNPVRCRLAVLRRRIVPLFAITALHCNDLSGHNLYLNPSVFG*
Ga0070713_10225201823300005436Corn, Switchgrass And Miscanthus RhizosphereMRRVLPATLAKLLHLDPVRSRLPVLGGRVVALFAITALHRNNFSGH*
Ga0070713_10226880123300005436Corn, Switchgrass And Miscanthus RhizosphereMLPAPAAELLQLNPVRGRLAVLRCRIVPLFAITALHGNDLSGHKTQLLASCS*
Ga0070710_1131692613300005437Corn, Switchgrass And Miscanthus RhizosphereMRRMLAATVAELLQFQPVRCRLTVLGLRVIPLFALTALHRNNFSGHN*
Ga0070711_10076998813300005439Corn, Switchgrass And Miscanthus RhizosphereMRRVLAADAAELFQLQALRHSLPVLGGRIVPLFAIAALQGNDLSGHNTAPGFW
Ga0070707_10142815333300005468Corn, Switchgrass And Miscanthus RhizosphereMLPATPAELLDLQAIRSSFPVLGGRIIPLFAITALQRNDLSGHEN
Ga0070739_1012752543300005532Surface SoilMRRMLPASPAELLQLQPVGRRLAVLRRRIVPLFAITALHCNDLSGHKTKLLAVSV*
Ga0070732_1102617813300005542Surface SoilMWRMLPATAAELLNLQPIRHRLPILGSRIIPLFAFTALQRNDLSGHKNNSSLLALALRL*
Ga0066701_1094031113300005552SoilMLAAPVAELFQLQPVRRRLTILGCRIIPLFAITALHRNDLSGHTKQL
Ga0066700_1089720733300005559SoilMLPAPRAELLQLQAVRSRFPVLRGRIIPLFAITALQRNDLSGHSAPSFFLCGAGALARE
Ga0066691_1053834813300005586SoilMLAAPIAKFLQLQPVRLRLAVLRSRIVPLFAITALHRNDLSGHTK
Ga0066706_1131470823300005598SoilMRRVLAADAAELLHLQPLRHSLPILGGRIVPLFAITALQRNDLSGHKRTAPSF*
Ga0070763_1075491513300005610SoilMRRVLAASVAEFLEFQPFRRRLPVLGRRIIPLFAITALQRNNLSGH
Ga0070763_1094402213300005610SoilMRRMLPAPLAKLLHLQPVRSRLPVLGGRIIPLFAITALQRNN
Ga0066903_10716456933300005764Tropical Forest SoilMRRMLAAAPAKLPQLEPVRSRLPVLRRRIIPLFAFTALHRNDLSGHKNQLLA
Ga0070717_1088739713300006028Corn, Switchgrass And Miscanthus RhizosphereMLAAPAAELLQFDPVGCRLAVLRGRIVPLFAITALHCNDLSGHKSKLLAISS*
Ga0070717_1161438523300006028Corn, Switchgrass And Miscanthus RhizosphereMRRMLTAPGTELLQLQPVRLGFAVLRRRIIPLFAITALHCNDLSGHTKTAPGF*
Ga0070712_10116658813300006175Corn, Switchgrass And Miscanthus RhizosphereMRCVLAAPAAELSQFNAIRCRLPVLGLRIVPLFAITALQRNDLSGH
Ga0075425_10091159943300006854Populus RhizosphereMRRVLAATSAELLQLKPVRSRLPVLGCRIIPLFAITALQRNNFSGH
Ga0105251_1050562833300009011Switchgrass RhizosphereMRRMLPALAAEFLEFQPLRRGLPVLRRRIIPVFAITALQRHNFSRHFTHSLLKGTGYKYP
Ga0099829_1174337413300009038Vadose Zone SoilMLTAPVAELLQFQPIRRRLAVFRRGIIPLFAITALHGNDFSGHKNSS*
Ga0116138_108684113300009552PeatlandMQRVLAAPAAELLQLQTVRRRFAVLGRRIVPLFAITALQRNDLSGHFNRS*
Ga0116138_111477733300009552PeatlandMLAATAAELLELQPFRRRLPVLGRRIIPLFAITALQRNNFSGHRSLLKF
Ga0116115_114509223300009631PeatlandMQRVLAAPAAELLQFQTVRSRLAVLGLRIVPLFAITTLQRNNLSGHTKQLLASGC*
Ga0127466_105552323300010116Grasslands SoilMRRVLAADAAELLQLQPLRHSLPILGGRIVPLFAITALQRNNFSGHKTAPGA*
Ga0126378_1293385513300010361Tropical Forest SoilMRRMLAAPPAELLQFQPVRSRLAVLRRRIIPLFAVTALHRNDLSGHDSS*
Ga0126379_1146107313300010366Tropical Forest SoilMLAAPPAELLQFQPVRSRLAVLRRRIVPFFAIAALQRNDLSGHLKPAPS
Ga0134126_1045297823300010396Terrestrial SoilVRRMLPATAAELLLLQPLGHRFAVLGRRIVPLFAITALHRDNFSGHCSLLNLSS*
Ga0134126_1167428923300010396Terrestrial SoilMRRMLPAPGTELLQLQPVRLSFAVLRRRIIPLFAITALHCNDLSGHNKTSS*
Ga0134127_1373712423300010399Terrestrial SoilVRRMLPATAAELLLLQPLGHCFAVLGRRIVPLFAITALHRNNFSGHCSLLNLSS*
Ga0126352_114692323300010859Boreal Forest SoilMSGVLSATAAEFLQFQPLSHGLSVLGLRIVPLFAIAALQGDDFSGHFTDS*
Ga0138528_11178833300011043Peatlands SoilMLAAAAAEFLELQPLCGRFPVLGGRIIPLFAITALQRNDLSGHETNS*
Ga0138545_13128213300011044Peatlands SoilMLPATLTEFLQLQPVRSGLPILRGRIIPLFAISALNRNNFSGHKKTAPGFW
Ga0138554_12975813300011049Peatlands SoilMLAATAAELLEFQPLGRRFAVLGRRVVPLFAITALHRNDFSGHENSS*
Ga0138531_11476113300011053Peatlands SoilMLPATLTEFLQLQPVRSGLPILRGRIIPLFAISALNRNNFSGHKKTAPGFWLL
Ga0138537_105964113300011063Peatlands SoilMLPATAAEFLQLQPVRGRLAVLGLRIIPLFAITALQRNDLSGHETNS*
Ga0138579_111334723300011090Peatlands SoilMLAAPAAELLQFQTVRRRLAVLGRRIVPLFAIAALQRNNLSGHFNRSWLPAASL*
Ga0150983_1338790833300011120Forest SoilMLAATAAEFLELQPLRRRLPVLGRRIIPLFAITALQRNNFSGHRSNSL
Ga0150983_1549845823300011120Forest SoilMLAATAAELLQLQPFRHRLPVLGLRIIPLFAITALQRNDLSGHENSSSVLKLLALNPLSS
Ga0137383_1064137043300012199Vadose Zone SoilMRRMLAAPVAKFLQLQPVRLRLAVLRSRIVPLFAITALHRND
Ga0137399_1063620123300012203Vadose Zone SoilATAAELLQLQPFRHRLPVLGLRIIPLFAITALQRDDLSGHENNS*
Ga0137362_1178299023300012205Vadose Zone SoilMRRMLATPVAELFQLQPVRRRLTVLGRRIIPLFAITALHRNNFSGHTKQLLALSF*
Ga0137376_1047586813300012208Vadose Zone SoilALAELFQFNPVRSCLPILGGRVIALFAITALQRNDLSGHENSS*
Ga0137376_1179652413300012208Vadose Zone SoilMRRVLAATPAEFLQFQPIRCSLPILGGRIVPLFAIAALQGNDLSGHKNSS*
Ga0134026_106850413300012381Grasslands SoilMLAAPIAKLLELQPVRLRLAVLRCRIVPLFAITALHRNDLSGHTKKLLAISL
Ga0137395_1104017223300012917Vadose Zone SoilMRRMLATPVAELFQLQPVRRRLTVLGRRIIPLFAITALHRNDFSGHTKQLLALSF*
Ga0137359_1023076213300012923Vadose Zone SoilMRRVLPATPAEFLQLQAIRSGFPVLGGRIIPLFAITALQRNDLSGHSAPSFFLCGAGALAREKL
Ga0137416_1096345513300012927Vadose Zone SoilVLAAPVAELLQFQTVRRRFAVLGLRIVPLFAITTLQRNNLSGHTKPLLASSF
Ga0164298_1135672113300012955SoilMRRMLPATVAKLLHLDPVRSRFPVLGSRVVPLLTITALHRNNLSGHC*
Ga0126369_1260762523300012971Tropical Forest SoilMRRVLATPSAELLLLDPVRGRLAVLHRRIVPLFAITALQRNDLSGHTTKLLASGC*
Ga0182017_1088102123300014494FenMQRVLAAPAAELLQFQTVRRRFAVLGLRIVPLFAIAALQRNDLSGHFNSSWLLALSF*
Ga0182015_1039010733300014495PalsaMLAATVTELFELQPFRRRLPVLGGRIIPLFAIAALQRNNFSGHRSLLKIQ*
Ga0182019_1020145913300014498FenMQRVLAAPAAELLQFQTVRRRFAVLGLRIVPLFAIATLQRNDLSGHFNGSWLLALSF*
Ga0181522_1011935613300014657BogVLAATAAELFELQPFRGRLPVLGGRIIPLFAITALQRNNFSGHNSLLLPVH
Ga0132255_10064145613300015374Arabidopsis RhizosphereRMLAAPAAELFQFQPIRGRLTILGLRIIPLFAITALHRNNFSGHFNHS*
Ga0181511_137581223300016702PeatlandMRRVLAAPAAELLQFQTVRCRFAVLGLRIVPLFAITTLQRNDLSGHCSLPNPAFSV
Ga0187802_1042372113300017822Freshwater SedimentMRRVLAAPAAKFLLLDAVRCRLAVLHGRVIPLFALATLQCNDLSGHTKQRLVLSF
Ga0187818_1050261823300017823Freshwater SedimentMLAATAAEFLELQPFRRRLPVLGGRIIPLFAITALQRNNFSGHRSLLNSMQK
Ga0187825_1036715813300017930Freshwater SedimentMRRMLAAPAAELLQFHPVRCRLAVLRRRIIPLFAITALQRNDLSGHNPAPSY
Ga0187821_1050397213300017936Freshwater SedimentMRRMLAAPAAELLQFNPVRRRFAVLRRRIIPLFAITALHCNDLSGHTKTAPSF
Ga0187874_1034836313300018019PeatlandMQRVLAAPAAELLQFQTVRSRLAVLGLRIVPLFAITTLQRNNL
Ga0187861_1031686813300018020PeatlandMQRVLAAPAAELLQFQTVRSRLAVLGLRIVPLFAITTLQRNNLSGH
Ga0187882_136704123300018021PeatlandMQRVLAAPAAELLQLQTVRRRFAVLGRRIVPLFAITALQRNALSGHFNRS
Ga0184603_10167343300019192SoilMRRMLPATLAEFFHLQPVRSRLPILGARIVPLFAITALHRNDFSGH
Ga0181512_136167123300019270PeatlandMRGVLAAPVAELLQLQPVRHRFAVLGLRIVPLFAITTLQRNNLSGHFKQLLASGY
Ga0187794_159721913300019273PeatlandMRRMLPATLAKLLHLQPVRSRLPVLGGRVIPLFAITALQRNDLSGHDKNSS
Ga0187798_114781333300019275PeatlandVRRVLAATAAELLELQPIRGRLAILGRRVIPLFALAALQRNVLSGHCSLL
Ga0182031_127912713300019787BogMLAATAAEFLELQPFRRRLPVLGRRIIPLFAITALQRNNFSGHRSLQNSS
Ga0182031_145181153300019787BogMLAATAAEFLELQPFRRRLPVLGRRIIPLFAITALQRNNFSGIAHSKTALKLLALSF
Ga0193751_106621123300019888SoilMFAATAAEFLQFQPLSHGLPVLGLRVIPLFAIAALQRNDFSGHSSLQTAFGF
Ga0193755_119017023300020004SoilMRRVLAADAAEFLQLQPLRHGLPVLGGRIIPLFAITALQRDNFSGHKSSS
Ga0179592_1053369113300020199Vadose Zone SoilMCLMLAATGAELLQFNAVRCRFAVLRGRVIPLFALATLQRNDLSGHENSS
Ga0210404_1004759013300021088SoilMLPATLAKLLHLDPIWCRLPVLGCRVIAFFAITALHRNDFS
Ga0210397_1066944513300021403SoilMLPATLAEFLHLQPVRSGLPILGGRIVPLFAITALHR
Ga0210383_1147092823300021407SoilMLPATLTKLLQLQPVWSRLPVLGARIVPLFTITALHRNDFSGHKKTAPGL
Ga0210402_1178916733300021478SoilMLPATLTKLLQLQPVRSRLPVLGARIVPLFAITALHRNNFSGHENRS
Ga0210410_1085406613300021479SoilMLTATSAEFLQFQPLGHGLPVLGLRVIPLFAIAALQRNDFSGHENSS
Ga0242652_105367523300022510SoilMRRMLPAPLAKLLHLQPVRSRLPVLGARIVPLFAITALHRNDFSGHKKTAPGL
Ga0212123_1076500013300022557Iron-Sulfur Acid SpringMLPATLAEFLQLQPVRSGLPILGGRIIPLFAVTALDRNNFSGHEKSS
Ga0242673_109051013300022716SoilMLAATAAEFLELKPLCRRLPVLGGRIIPLFAITALHRHNFSGHFNRS
Ga0233357_105733413300023056SoilVRRVLAAPVAELLQFQTVRRCFAVLGLRIVPLFAITTLQRNNLSGHCSLPKPALGL
Ga0224544_102902843300023250SoilMLAATVTELFELQPFRRRLPVLGGRIIPLFAIAALQRNNFSG
Ga0208039_105059213300025454PeatlandMQRVLAAPAAELLQLQTVRRRFAVLGRRIVPLFAITALQRNDLSGHFNRS
Ga0207699_1139621223300025906Corn, Switchgrass And Miscanthus RhizosphereMRRMLPAPGTELLQFQPVRLSFAVLRRRIIPLFAITALHCNDLSGHTKTAPSF
Ga0207663_1165138823300025916Corn, Switchgrass And Miscanthus RhizosphereMLAATVAELLQFQPVRCRLTVLGLRVIPLFALTALHRNNFSGHN
Ga0207664_1190844613300025929Agricultural SoilMLAATVAELFQFQPVRCRFTVLGRRIIPLFAITALHRNNLSGHTKTAPSF
Ga0207664_1192827313300025929Agricultural SoilLLNFFMRRMLPAPVAELLQFQPVRSRLAVLRCRIVPLFAITALHCNDLSGHTKTAPSF
Ga0209350_111249613300026277Grasslands SoilMRRVLPATPAEFLDLQPIRSGFPVLGGRIIPLFAITALQRNDLSGHSAPSFFLCGAGALAREKLCGAS
Ga0209687_101476713300026322SoilMRRVLPATPAEFLDLQPIRSGFPVLGGRIIPLFAITALQRNDLSGHSAPGFFLCGAGALAREKLCGAS
Ga0247846_104638913300026474SoilMRRVLAAPAAELLQLQPVRCRFAVLGRRIIPLFAIAALQRNNFSGHFNSSWLLA
Ga0209059_117034623300026527SoilMRRVLTAPATELFHFQPLRLRLTVLGRRIISLFAITALHRNNLSGHTKTAPSF
Ga0207825_11577523300026871Tropical Forest SoilMLPAPLAELLQFDAVRRGLAIFRLRVIALFAITALHCDDLSGHNKTAPSSLASSC
Ga0208984_113646213300027546Forest SoilVRRVLAAPVAELLQFQTVRCRFAVLGLRIVPLFAITTLQRNNLSGHCSLPKPALGL
Ga0209689_141421313300027748SoilMRRVLPATTAELLQLQPVRCRLPVLGFRIVPLFAITALQCNNFSGHRS
Ga0209772_1013029023300027768Bog Forest SoilMLAATAAELLELQPLRRRLPVLGRRIIPLFAIAALQCNNLSGHRSLQNSS
Ga0209580_1060060523300027842Surface SoilMRRMLPATLTELLHLDPVRSRLPVLGSRVVALLAVTALHRNNFSGH
Ga0209693_1004543413300027855SoilMRRVLAASVAEFLEFQPFRRRLPVLGRRIIPLFAITALQRNNLSGHFSLP
Ga0209380_1010572723300027889SoilMLAATAAEFLELKPLCRRLPVLGGRIIPLFAITALQRNNLSGHENSS
Ga0311369_1086459313300029910PalsaMLAATVTELFELQPFRRRLPVLGGRIIPLFAIAALQRNNFSGHRSLLKIQ
Ga0311363_1151765013300029922FenMRRVLAAAATELLELQPFRRRLPVLGGRIISLFAIAALQRNNFSGHKTAPSS
Ga0311328_1059097613300029939BogMLAATAAEFLELKPFRRRLPVLGRRIIPLFAITALQRNNFSGHRSLQNSS
Ga0302046_1073548013300030620SoilLFVRRMFAALAAELRELQTIRRGLAVLGRRIVPVLALRALQRNDLSRHNLHS
Ga0307482_104786323300030730Hardwood Forest SoilMLAAPVAELLQFQTVRCRFAVLGLRIVPLFAITTLQRNNLSGHCSLPKPALSL
Ga0075393_1098780533300030849SoilMRCVLTAPVAELLQLQAIRRRLAVLGLRIVPLFAITTLQRNNFAH
Ga0073996_1243999213300030998SoilMRRVLAADAAELFQLQALRHGLPVLGGRIVPLFAIAALQGNDLSGHKDSS
Ga0138301_114790313300031022SoilMRRVLAATTAELFQLQPLRHRFAVLGLRVIPLFAIAALHRNNFSGHITAPGF
Ga0170824_10104577513300031231Forest SoilMRRMLPASLTEFLQLHAVRSGLPVLRGRIVPVFAITALQRNNFSGHKTAPSFLASSS
Ga0302325_1302599933300031234PalsaMFAATVAELLELQAFCRRLPVLGGRIIPLFAIAALQRNNFSGH
Ga0170819_1009294433300031469Forest SoilMRCVLTAPVAELLQLQAIRRRLAVLRLRIVPLFAITALQGNNFAHRSLPTLSRVARA
Ga0170819_1478833723300031469Forest SoilMLATPVAELFQFQPIRRRLAVLRRRIIPLFAITALHRNNFSGHLK
Ga0307475_1119470723300031754Hardwood Forest SoilMLAAPAAELAQFQTVRLRLTVLSRRIIPLFAITALHRNDLSGHTKTAPGF
Ga0348332_1354949923300032515Plant LitterMRRVLAATAAELLEFQPLRRGLPVLGRRIISLFAITALQRNNFSGHENSS
Ga0310914_1161341813300033289SoilMRRMLPATVAELLQFDPVRRRLAVLGLRVIPLFAFTALHRNNFSGHNKNSSWLLALGL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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