NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070396

Metagenome / Metatranscriptome Family F070396

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070396
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 42 residues
Representative Sequence DFGRQPIRRGETFALPASLPVRVRAGREPVRVIRCLGPLVE
Number of Associated Samples 107
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.894 % of family members)
Environment Ontology (ENVO) Unclassified
(26.016 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.715 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01168Ala_racemase_N 60.98
PF14031D-ser_dehydrat 14.63
PF01152Bac_globin 3.25
PF00324AA_permease 2.44
PF04030ALO 1.63
PF13520AA_permease_2 1.63
PF00106adh_short 0.81
PF01609DDE_Tnp_1 0.81
PF08940DUF1918 0.81
PF028262-Hacid_dh_C 0.81
PF11774Lsr2 0.81
PF02653BPD_transp_2 0.81
PF17042NBD_C 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 3.25
COG0531Serine transporter YbeC, amino acid:H+ symporter familyAmino acid transport and metabolism [E] 2.44
COG0833Amino acid permeaseAmino acid transport and metabolism [E] 2.44
COG1113L-asparagine transporter or related permeaseAmino acid transport and metabolism [E] 2.44
COG1115Na+/alanine symporterAmino acid transport and metabolism [E] 2.44
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 1.63
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.81
COG3293TransposaseMobilome: prophages, transposons [X] 0.81
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.81
COG5421TransposaseMobilome: prophages, transposons [X] 0.81
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.81
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.81


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.38%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.69%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.25%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.44%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.63%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.81%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070683_10067799223300005329Corn RhizosphereGSGLVETDSGSQPVRRGQTFALPASLPFRVRAGTEPVRIIRCLGPAA*
Ga0066388_10030778633300005332Tropical Forest SoilGFIEGNFGRRPIRRGETFALPASLPFRVQAGPGPVRVVRCLGPSVT*
Ga0070709_1038673523300005434Corn, Switchgrass And Miscanthus RhizosphereRQPLRRGQTFAWPASLALRVRAGREPVRIVRCLGPEEAR*
Ga0070714_10185505413300005435Agricultural SoilRQALRRGQTFAWPASLALRVRAGREPVRIVRCMGPEEAG*
Ga0070710_1005390423300005437Corn, Switchgrass And Miscanthus RhizosphereRQPVRKGQTFAWPASLSLRLRAGREPVRVVRCLGPLLGPAV*
Ga0070711_10187549023300005439Corn, Switchgrass And Miscanthus RhizosphereWAEGEFGRQPLRRGQTFAWPASLALRVRAGREPVRIVRCLGPEEAR*
Ga0070708_10017154413300005445Corn, Switchgrass And Miscanthus RhizosphereSIEGNFGRKPIRRGETLALPASLPFRVQAGPEPVRVIRCLGPNVE*
Ga0070706_10150462623300005467Corn, Switchgrass And Miscanthus RhizosphereVSGSGLLEGNFGSQPIRRGETYALPASLPLRVRAEAEEVGVVRCLGPAAG*
Ga0070679_10033218423300005530Corn RhizosphereSGSGLVETDSGSQPVRRGQTFALPASLPFRVRAGTEPVRIIRCLGPAA*
Ga0066699_1031069013300005561SoilDFGQQPVRKGQTFAWPASLSLRVRAGREPVRIVRCLGPREA*
Ga0068855_10188079923300005563Corn RhizosphereRKGQTFAWPASLSLRLCAGRAPVRIVRCLGPREA*
Ga0070763_1008815613300005610SoilGRQPVRKGETFALPASLPVRVRAGREPVRVIRCLGPAVD*
Ga0070763_1044088023300005610SoilQPIRRGETYALPASLSFRVRSGREPLRVVRCFGPAAA*
Ga0070766_1010924713300005921SoilQPIRRGETYALPASLPFRIRAAAAGAEPLRVIRCLGPAVR*
Ga0070717_1057903313300006028Corn, Switchgrass And Miscanthus RhizosphereEGDFGRQPIRRGQTFALPASLPVRIRAGREPVRVIRCLGPAGS*
Ga0070717_1106182423300006028Corn, Switchgrass And Miscanthus RhizosphereQPIRRGETYALPASLPFRVRAGREPLRVVRCFGPAAE*
Ga0066696_1110475913300006032SoilGDFGRQPIRKGQAFAWPASLALRVRAGREPVRIVRCLGPREA*
Ga0070712_10059021113300006175Corn, Switchgrass And Miscanthus RhizosphereRGQTLALPASLPVRVRAGPEPVRVIRCLGPAEPARHDQ*
Ga0097621_10091586123300006237Miscanthus RhizosphereFGNQPIRRGETFALPASLHVRVRAGTEPVKVIRCLGPAAE*
Ga0097621_10104026213300006237Miscanthus RhizosphereLRRGQTFAWPASLALRVRAGREPVRIVRCRGPEEAR*
Ga0066665_1117416113300006796SoilQQPVRKGQTFAWPASLSLRVRAGREPVRIVRCLGPREA*
Ga0079221_1008639133300006804Agricultural SoilRRGQTFALPASLPIRVRAGSEDVRVIRCLGPTPA*
Ga0073928_1023321213300006893Iron-Sulfur Acid SpringFVEGDFGSLPVRRGDTFALPASLPVRVRAQHEPVRVVRCLGPAAS*
Ga0073928_1028247523300006893Iron-Sulfur Acid SpringGSQPIRRGETYAVPASLPFLVRAGSEPIRVVRCFGPAAERAPS*
Ga0099830_1176890823300009088Vadose Zone SoilRQPIEKGQSFAWPACLALRLRAGREPLRVVRCLGET*
Ga0066709_10226517613300009137Grasslands SoilASGSGSIEGEFGSQPIRRGETFALPASLHFRVRAGTEPVRVIRCLGPAAE*
Ga0126374_1133205023300009792Tropical Forest SoilFGRQPIRRGETFALPASLHFRVRAETEPVKVIRCLGPAAE*
Ga0126373_1057788313300010048Tropical Forest SoilSGTGWIESDFGSQPIRQGETYALPASLPFRIRAGTEPVRVVRCLGPGAE*
Ga0126373_1285367723300010048Tropical Forest SoilVVAGSGSVDGDFGRQPVRHGQTFAVPASLPVRVRAGREPVRVIRCLGPEPE*
Ga0123356_1409882623300010049Termite GutSEVVSRGETYALPASMPFRVRAGAESLRIIRCLGPTTEP*
Ga0126370_1030797613300010358Tropical Forest SoilSGAGSLEGDFGTQPLSRGETYALPASVPFRVRAGREPLRVIRCLGPTTEH*
Ga0126372_1155641423300010360Tropical Forest SoilGRRPIRRGETFALPASLPFRVQAGPGPVRVVRCLGPSVT*
Ga0126378_1164339023300010361Tropical Forest SoilSIDGDFGSEPVRRGQTFALPAGLPIRVRAGTEAVRVIRCLGPAPA*
Ga0134066_1039726223300010364Grasslands SoilIRKGQAFAWPASLALRVRAGREPVRIVRCLGPREA*
Ga0126379_1117623323300010366Tropical Forest SoilSGSIDGGFGSQPVSQGETYALPASVPFRVRAGRDPLRVIRCLGPTTEP*
Ga0126381_10018307333300010376Tropical Forest SoilIEGDFGVQPIRRGQTFALPASFGFRVRAGSAGPVRVIRCLGPPSSD*
Ga0126381_10036638713300010376Tropical Forest SoilFGSQPIRRGETFALPANLPFRVRSAAELLRVVRCLGPANY*
Ga0126381_10404694813300010376Tropical Forest SoilIEGNFGRRPIRRGETLALPASLPFRVQAGPEPVRVVRCLGPNVE*
Ga0126383_1133869613300010398Tropical Forest SoilGRVPVRSGQTFALPASLPIRVRAGSEAVRVIRCLGPAPP*
Ga0126383_1148603013300010398Tropical Forest SoilQPIRRGETFALPASLQFRVRAGSEPVRVIRCLGPAAE*
Ga0134123_1020496713300010403Terrestrial SoilQPVRKGQTFAWPASLSLRLCAGRAPVRVVRCLGPAV*
Ga0126356_1098367013300010877Boreal Forest SoilTGSIDGDFGSQPVRRGQTFALPASLPTRVRAGREAVRVIRCLGPAVA*
Ga0137370_1078653613300012285Vadose Zone SoilGDGWAEGDFGQQPVRKGQTFAWPASLSLRVRAGREPVRVVRCLGSTV*
Ga0137361_1186562923300012362Vadose Zone SoilSIDGDFGSQPVRRGQTFALPASLPTRVRAGREAVRVIRCLGPVVA*
Ga0137410_1191391223300012944Vadose Zone SoilGRLPVRRGETFALPASLAFRLRAGQEPVHVIRCLGPAVDEDA*
Ga0164303_1010840913300012957SoilAGSIEGEFGRQPIRRGETFALPASLRFRVRAGAEPVRVIRCLGPAAE*
Ga0157369_1146228723300013105Corn RhizosphereGAGFIDGDFGAQPVARGQTLALPASLPVRVRAGPEPVRVIRCLGPAEPARHDQ*
Ga0132257_10286835123300015373Arabidopsis RhizosphereAGFIEGNFGRRPIRRGETFALPASLHFRVQAGPEPVRVVRCLGPIVE*
Ga0182041_1159759423300016294SoilQPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0182035_1092285223300016341SoilDGDFGRQPIRRGQTFAMPASLPTRVRAGREPVRVIRCFGPSPL
Ga0187809_1007452723300017937Freshwater SedimentDFGRQPIRKGQAFAWPASLALRVRAGREPVRIVRCLGPREA
Ga0187785_1042179313300017947Tropical PeatlandGRMPIRRGETLALPASLPFRVRAGRERVNVVRCLGPGAE
Ga0187782_1143796623300017975Tropical PeatlandVVSGDGYLEGDFGRQPIRRGETFALPASLPVRARAGREPVRVVRCLGPALE
Ga0181520_1113510223300017988BogLPISRGDTFALPASLAFAAVAAEEPVRIVRCLGPSTE
Ga0187765_1090297323300018060Tropical PeatlandGSQRVRQGETYALPASLPFRVRAGREPLRVIRCLGPTTEP
Ga0187772_1010128333300018085Tropical PeatlandDGSVEGDFGRWPVRRGDTFALPASLTVRVRAGREPVRVVRCLGPTLE
Ga0187774_1036272923300018089Tropical PeatlandVASGAGSIEGEFGSQPIRRGETFALPASLQFRVRAGSEPVRVIRCLGPAAE
Ga0187774_1128768923300018089Tropical PeatlandFGRQPIRRGETFALPASLHFRVRAGTEPVRVIRCLGPAAE
Ga0210399_1116500923300020581SoilDGDFGSQPVRQGQTFALPASLPIRVRAGPEAVRVIRCLGPSRNDQHRMSSTA
Ga0210405_1037191123300021171SoilSQPIRRGETYALPASLPFRVRAGREPLRVVRCFGPAAE
Ga0210396_1128847213300021180SoilPIRRGETYALPASLSFRVRSGREPLRVVRCFGPAAA
Ga0210388_1104875113300021181SoilEGDFGTQPIRRGETYALPASLPFRIRAAAAGAEPLRVIRCLGPAVR
Ga0213882_1028647823300021362Exposed RockDCGGQPIGKGQSFAWPASLALRVRAGREPVRIVRCMGPEEAR
Ga0210386_1066549213300021406SoilGTQPIRRGETYALPASLPFRIRAAAAGAEPLRVIRCLGPAVR
Ga0210390_10004219133300021474SoilEGDFGSQPIGRGETYALPASLPFRVRAGREPLRVVRCFGPADRAPA
Ga0210390_1023651813300021474SoilRLPLRPGQSFAWPASLALRVRAGREPLRVVRCLGPS
Ga0210398_1050648013300021477SoilRGETYALPASLPFRIRAAAAGAEPLRVIRCLGPAVR
Ga0210398_1057630713300021477SoilEGEFGRVPIRRGETFALPASLPFRVRAEREPVRVVRCLGPSTE
Ga0210402_1036794423300021478SoilFGRQPIRKGQTFAWPASLALRVRAGQEPVRIVRCLGPQEA
Ga0126371_1281018413300021560Tropical Forest SoilPIRPGETFALPASLPVRVRAGREPVRVVRCLGPVVT
Ga0126371_1282483923300021560Tropical Forest SoilGSQPIRRGETFALPASLQFRVRAGSEPVRVIRCLGPAAE
Ga0179589_1061175013300024288Vadose Zone SoilEFGSQPIRRGETFALPASLHLRVRAGTEPVKVIRCLGPAAE
Ga0207693_1048373323300025915Corn, Switchgrass And Miscanthus RhizosphereSQPICRGETFALPASLHFRVRAGTEPVRVIRCLGPAAE
Ga0207663_1097302123300025916Corn, Switchgrass And Miscanthus RhizosphereDGWAEGDFGRQPIRKGQAFAWPASLALRVRAGREPVRIVRCLGPREA
Ga0207687_1125972723300025927Miscanthus RhizosphereDFGRQPIRRGETFALPASLHVRVRAGTEPVKVIRCLGPAAE
Ga0207700_1004948543300025928Corn, Switchgrass And Miscanthus RhizosphereAEGDFGRQPIRKGQAFAWPASLALRVRAGREPVRIVRCLGPQEA
Ga0207704_1033500813300025938Miscanthus RhizosphereGDFGRQPLRKGQTFAWPASLSLRLCAGRAPLRVVRCLGPATR
Ga0207676_1055902113300026095Switchgrass RhizosphereVSGAGFIDGDFGAQPVARGQTLALPASLPVRVRAGPEPVRVIRCLGPAEPARHDQ
Ga0209474_1059738623300026550SoilGDFGRQPIRKGQAFAWPASLALRVRAGREPVRIVRCLGPREA
Ga0209008_107043423300027545Forest SoilDGDFGRQPVRRGQTFAVPASLPTRVRAGPDPVRVIRCLGPVAA
Ga0209074_1044163323300027787Agricultural SoilIEGNFGRRPIRRGETFALPASLPFRVWAGPEPVRVVRCLGPSVT
Ga0209656_1002317313300027812Bog Forest SoilAVVVCGAGSIDGDFGSQPVRRGQTFAVPASLPTRVRAGPEAVRVIRCLGPTLT
Ga0209180_1040658623300027846Vadose Zone SoilRIRAGETFALPASLPFRVRAGREPVRVVRCFGPGTP
Ga0209590_1086227623300027882Vadose Zone SoilASGAGFVEGAFGSRPIRRGETFALPASLSLRVRAGREPVRVVRCLGPSVE
Ga0209006_1013613133300027908Forest SoilGREPIRRGQTFALPASLPVAIRAGREPVRVIRCLGPAVP
Ga0209006_1148443723300027908Forest SoilSIHGNFGDVAVRRGETFALPAHLPIRVAAGREPLRIVRCFGPTAN
Ga0307323_1001278813300028787SoilFGSRPVRRGETFALPASLHFRVRAGGEPVRIIRCLGPAAE
Ga0307312_1027791513300028828SoilPVRRGETFALPASLHFRVRAGGEPVRIIRCLGPAAE
Ga0307501_1006135313300031152SoilGDGWAEGDFGRQPVRKGQTFAWPASLSLRLCAGRAPVRVVRCLGPAV
Ga0307506_1037043813300031366SoilRQPLRKGQTFAWPASLSLRLCAGQEPLRVVRCLGPATR
Ga0318573_1079672913300031564SoilIEGEFGSQPIRRGETFALPASLHFRVRAGTEPVRVIRCLGPAAE
Ga0318555_1041836013300031640SoilSGTGSIDGDFGRQPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0318561_1046470913300031679SoilGFIEGNFGRVPIRRGETLALPASLPVRVHAGPEPVHVVRCLGPGVEGL
Ga0318572_1021918923300031681SoilGSEQVRRSETFALPASLPVRVRAGREPLRIIRCLGPAVP
Ga0318493_1030528323300031723SoilLEGDFGRRPIRRGETFALPASLPVRVRAGQEPVRVVRCLGPVVE
Ga0318500_1015999113300031724SoilRQPVRRGETFALPASLPVRVRAGREPVRVIRCLGPKVP
Ga0318492_1052251323300031748SoilDGDFGRQPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0318494_1036747313300031751SoilRVPIRRGETLALPASLPVRVHAGPEPVHVVRCLGPGVEGL
Ga0318554_1006649733300031765SoilEGDFGRRPIRRGETFALPASLPVRVRAGQEPVRVVRCLGPVVE
Ga0318554_1087499813300031765SoilFGRQPVRRGETFALPASLPVRVRAGREPVRVIRCLGPKVP
Ga0318509_1038147013300031768SoilGGFGRVPIRRGQTFALPASLPFRVRAERDEPVRVIRCLGPGAG
Ga0318521_1058248113300031770SoilVAGTGSIDGDFGSQPVRRGQTFALPASLPIRVRAGPEAVRVSRCLGPTPE
Ga0318546_1063829513300031771SoilSIDGDFGRQPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0318529_1007142533300031792SoilSQPVRRGQTFALPASLPIRVRAGREAVRVIRCLGPAVA
Ga0318564_1019224123300031831SoilQVRRGETFALPASLPGRVRAGREPLRIIRCLGPAVP
Ga0306919_1123788613300031879SoilVSGAGSIDGDFGSEPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0318544_1025665413300031880SoilIDGDFGSQPVRGGQTFALPASLPIRVRAGREAVRVIRCLGPAVA
Ga0310916_1132059513300031942SoilVRRGETFALPASLPVRVRAGREPVRVIRCLGPKVP
Ga0310909_1041066623300031947SoilSRGETYALPACVPFRVRAAREPLRIIRCLGPTTEL
Ga0318531_1057814713300031981SoilIDGDFGREPVRRGQTFALPAGLPIRVRAGTEAVRVIRCLGPAVA
Ga0318562_1082154213300032008SoilAGWVEGGFGRVPIRRGQTFALPASLPFRVRAERDEPVRVIRCLGPGAG
Ga0318563_1006728213300032009SoilEGDFGRQPIRRGETFALPASLPVRVRAGREPVRVIRCLGPLVE
Ga0318504_1011213923300032063SoilVRRGQTFAVPASLPIRVRAGREAVRVIRCLGPAVA
Ga0318524_1019171413300032067SoilAFEGDFGRRSIRRGETFALPASLTFRVRAGREPVRVVRCFGPSLE
Ga0318553_1004208033300032068SoilDFGRQPIRRGETFALPASLPVRVRAGREPVRVIRCLGPLVE
Ga0318553_1013440513300032068SoilAGWVQGGFGRVPIRRGQTFALPASLPFRVRAERDEPVRVIRCLGPGAG
Ga0318553_1055604913300032068SoilDFGRQPVRRGQTFALPASLPIRVRAGTEAVRVIRCLGPAVA
Ga0306924_1051388613300032076SoilIDGDFGNQPVSRGETYALPACVPFRVRAAREPLRIIRCLGPTTEL
Ga0318518_1056607713300032090SoilVEGGFGRVPIRRGQTFALPASLPFRVRAERDEPVRVIRCLGPGAG
Ga0335085_1130291423300032770SoilMTSDFGRQPIRKGQTFAWPASLALRVRAGQEPVRIVRCLGPQEA
Ga0335082_1006825043300032782SoilVRRGQTFALPASLPIRVRAGREAVRVIRCLGPAVA
Ga0318519_1061451523300033290SoilVAGAGFIEGNFGRVPIRRGETLALPASLPVRVHAGPEPVHVVRCLGPGVEGL
Ga0326726_1200512313300033433Peat SoilVEGDFGRAPIRRGETFALPASLPVRVRAGREPVRVVRCLGPDPA


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