Metagenome Family F070402

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070402
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	79 residues
Representative Sequence	MKRVLYSVCIGSLALALTAGGAQAAKDKRPERAKPQQRTANVHAARPANIGRTMSAHRNVSAAQYRQRSYAK
Number of Associated Samples	113
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.43 %
% of genes near scaffold ends (potentially truncated)	98.37 %
% of genes from short scaffolds (< 2000 bps)	94.31 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.553 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.447 % of family members)
Environment Ontology (ENVO)	Unclassified (34.959 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.967 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.00% β-sheet: 0.00% Coil/Unstructured: 53.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01471	PG_binding_1	15.45
PF10543	ORF6N	5.69
PF14237	GYF_2	2.44
PF15919	HicB_lk_antitox	2.44
PF02452	PemK_toxin	1.63
PF01565	FAD_binding_4	1.63
PF13414	TPR_11	0.81
PF10049	DUF2283	0.81
PF01272	GreA_GreB	0.81
PF08734	GYD	0.81
PF05016	ParE_toxin	0.81
PF00701	DHDPS	0.81
PF04055	Radical_SAM	0.81
PF00282	Pyridoxal_deC	0.81
PF03466	LysR_substrate	0.81
PF00155	Aminotran_1_2	0.81
PF02661	Fic	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.63
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.63
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.81
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.81
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	66.67 %
Unclassified	root	N/A	15.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	66.67 %
Unclassified	root	N/A	15.45 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	53.66 %
Unclassified	root	N/A	15.45 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.63 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	53.66 %
Unclassified	root	N/A	15.45 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.63 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.81 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.81 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.81 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.81 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	53.66 %
Unclassified	root	N/A	15.45 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.63 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.81 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.81 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.81 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.81 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	53.66 %
Unclassified	root	N/A	15.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.63 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.81 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.81 %
Achromobacter piechaudii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter piechaudii	0.81 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.81 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	53.66 %
Unclassified	root	N/A	15.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.63 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.81 %
Roseomonas sp. B5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. B5	0.81 %
Achromobacter piechaudii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter piechaudii	0.81 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.81 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	53.66 %
Unclassified	root	N/A	15.45 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.63 %
Frankia sp. DC12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12	0.81 %
Roseomonas sp. B5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. B5	0.81 %
Achromobacter piechaudii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter piechaudii	0.81 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.81 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221209308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1027849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300000955\|JGI1027J12803_108155354	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300000955\|JGI1027J12803_109096641	Not Available	515	Open in IMG/M
3300001979\|JGI24740J21852_10075338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	894	Open in IMG/M
3300005167\|Ga0066672_10544084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	752	Open in IMG/M
3300005179\|Ga0066684_10881323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300005187\|Ga0066675_11129235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300005288\|Ga0065714_10508945	Not Available	519	Open in IMG/M
3300005289\|Ga0065704_10212018	Not Available	1102	Open in IMG/M
3300005290\|Ga0065712_10505031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300005294\|Ga0065705_10539953	Not Available	747	Open in IMG/M
3300005295\|Ga0065707_11005500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005329\|Ga0070683_101866109	Not Available	578	Open in IMG/M
3300005331\|Ga0070670_100745547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300005332\|Ga0066388_108460772	Not Available	512	Open in IMG/M
3300005343\|Ga0070687_101148568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. DC12	570	Open in IMG/M
3300005344\|Ga0070661_100758615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	794	Open in IMG/M
3300005353\|Ga0070669_101172465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300005356\|Ga0070674_101495642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300005366\|Ga0070659_101315519	Not Available	641	Open in IMG/M
3300005436\|Ga0070713_101408652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300005436\|Ga0070713_101750849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005440\|Ga0070705_100321276	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1117	Open in IMG/M
3300005455\|Ga0070663_100901351	Not Available	764	Open in IMG/M
3300005518\|Ga0070699_100406101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1232	Open in IMG/M
3300005559\|Ga0066700_10630634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300005577\|Ga0068857_100376704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1317	Open in IMG/M
3300005587\|Ga0066654_10377732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300005615\|Ga0070702_100581290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	836	Open in IMG/M
3300005764\|Ga0066903_100217544	All Organisms → cellular organisms → Bacteria	2890	Open in IMG/M
3300005764\|Ga0066903_108713027	Not Available	516	Open in IMG/M
3300006031\|Ga0066651_10625937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. B5	573	Open in IMG/M
3300006032\|Ga0066696_10869521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter piechaudii	574	Open in IMG/M
3300006046\|Ga0066652_101211494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	715	Open in IMG/M
3300006175\|Ga0070712_100374424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1171	Open in IMG/M
3300006175\|Ga0070712_100623193	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300006175\|Ga0070712_101379184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300006237\|Ga0097621_100155659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1962	Open in IMG/M
3300006796\|Ga0066665_10247529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1409	Open in IMG/M
3300006871\|Ga0075434_101583946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300006904\|Ga0075424_100674338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1104	Open in IMG/M
3300007255\|Ga0099791_10590087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300009012\|Ga0066710_101743103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300009100\|Ga0075418_10839573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	992	Open in IMG/M
3300009156\|Ga0111538_10751726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1235	Open in IMG/M
3300009176\|Ga0105242_12732109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300009545\|Ga0105237_11251924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300009545\|Ga0105237_11885465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300009553\|Ga0105249_12111991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300010320\|Ga0134109_10193380	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010320\|Ga0134109_10347292	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010335\|Ga0134063_10553247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300010362\|Ga0126377_13292091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300010373\|Ga0134128_11602122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300010397\|Ga0134124_12159417	Not Available	596	Open in IMG/M
3300010398\|Ga0126383_10035601	All Organisms → cellular organisms → Bacteria → Proteobacteria	4005	Open in IMG/M
3300011270\|Ga0137391_10134160	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300012200\|Ga0137382_10071662	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300012200\|Ga0137382_10599859	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300012208\|Ga0137376_10686866	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012285\|Ga0137370_10996781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300012361\|Ga0137360_10546759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	989	Open in IMG/M
3300012885\|Ga0157287_1056381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300012917\|Ga0137395_10935092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300012930\|Ga0137407_10630482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1007	Open in IMG/M
3300012955\|Ga0164298_11316920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300012957\|Ga0164303_10582436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300012957\|Ga0164303_11466529	Not Available	514	Open in IMG/M
3300012971\|Ga0126369_13088132	Not Available	545	Open in IMG/M
3300013503\|Ga0120127_10178854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300014968\|Ga0157379_12409814	Not Available	525	Open in IMG/M
3300014969\|Ga0157376_12540196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300015200\|Ga0173480_11231959	Not Available	507	Open in IMG/M
3300015371\|Ga0132258_12804616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300015372\|Ga0132256_102959277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300018433\|Ga0066667_11771438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300019361\|Ga0173482_10433422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300019869\|Ga0193705_1069736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300019875\|Ga0193701_1082749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300019883\|Ga0193725_1110991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300019886\|Ga0193727_1167530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300020016\|Ga0193696_1031700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1414	Open in IMG/M
3300020018\|Ga0193721_1007955	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300020018\|Ga0193721_1028718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1472	Open in IMG/M
3300022756\|Ga0222622_11341641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300023058\|Ga0193714_1003956	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300025911\|Ga0207654_10297983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1096	Open in IMG/M
3300025913\|Ga0207695_11121685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300025914\|Ga0207671_11157936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300025915\|Ga0207693_10344207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1167	Open in IMG/M
3300025916\|Ga0207663_11584995	Not Available	527	Open in IMG/M
3300025918\|Ga0207662_11031892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300025919\|Ga0207657_10167244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1783	Open in IMG/M
3300025926\|Ga0207659_10152613	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300025930\|Ga0207701_11198703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300025934\|Ga0207686_11688667	Not Available	524	Open in IMG/M
3300025936\|Ga0207670_10437074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300025961\|Ga0207712_10472930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1067	Open in IMG/M
3300026305\|Ga0209688_1102438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300026325\|Ga0209152_10440037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300026335\|Ga0209804_1128736	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300026374\|Ga0257146_1029125	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300026528\|Ga0209378_1273431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300026542\|Ga0209805_1361250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300026547\|Ga0209156_10208105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	930	Open in IMG/M
3300026952\|Ga0207434_1020767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300027401\|Ga0208637_1046071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300027502\|Ga0209622_1068078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300027821\|Ga0209811_10315637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300027903\|Ga0209488_11010110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300027909\|Ga0209382_12320366	Not Available	504	Open in IMG/M
3300028799\|Ga0307284_10440361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300028807\|Ga0307305_10537669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300028811\|Ga0307292_10139062	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300028885\|Ga0307304_10297405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300031740\|Ga0307468_100732730	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031908\|Ga0310900_10399544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1043	Open in IMG/M
3300031954\|Ga0306926_11906043	Not Available	671	Open in IMG/M
3300032075\|Ga0310890_10843202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300032211\|Ga0310896_10829915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300033551\|Ga0247830_11719766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.98%
Host-Associated	Host-Associated	26.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.17%
Plants	Host-Associated → Plants	26.02%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.88%
Sediment	Environmental → Aquatic → Sediment	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.54%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222046163	2209111022	Grass Soil	MENEGKNMKTILYTVCIGSLALALTAGGAQAAKDKGPERAKPQQRTAKVQPARPASAGRTMAVHRNVSTAQTRQ
AF_2010_repII_A01DRAFT_10278492	3300000580	Forest Soil	MKSILYSALVGTLALALASGGAQAAKDNNKRSQRAQPQQRTAKVQAARPANTSRTTSMNANAHRNVSAAQNRQR
JGI1027J12803_1081553542	3300000955	Soil	MEGNNMRRIIYSAFIGTLALALTAGAAQDKDKRSERTKPQQRTAKVHAARPANTGRTMSAHRNVSAAQYRQRSYAKPH
JGI1027J12803_1090966411	3300000955	Soil	GYSIVIGSLAVALTAGAAEDNKKKPERARPQHRTANVNAARPASTGRTMSAHSNVSAAQYRQRS
JGI24740J21852_100753381	3300001979	Corn Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAAT
Ga0066672_105440841	3300005167	Soil	MKSILYSVCIGTLGLALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTGATMSARRNASAAQYRQRSY
Ga0066684_108813231	3300005179	Soil	MKSILYSVCIGSLALALTAGGAQAPKDKRSERAKPQQRSAKVQATTPANTGRAMSARRNASAAQYRQRSYAKPRGSSNAVVE
Ga0066675_111292351	3300005187	Soil	MKPILYSVCIGSLALALTAGAAQAATDKRPERAKPQHRSANVQTAGPANAGRTVSAHRDVSAAQYRQQR
Ga0065714_105089452	3300005288	Miscanthus Rhizosphere	MKRILYSVCVGTLALTLTAGGAQAARDKRPERSRPQQRTATVHAARPANTGRTMNAHRNFSAAQHQ
Ga0065704_102120181	3300005289	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQAAKPANTGRNMSAHRNVSVAQNRQRSSYAKPRTSSAVNRAPRQA
Ga0065712_105050312	3300005290	Miscanthus Rhizosphere	MKSILYSICIGSLALALTAGGAQAAKDKRPERAKPQQRTANVQAARPANTGRTTSVHRNVSATQYRQRSNAKPRN
Ga0065705_105399531	3300005294	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQEKAKPQHRSANVQAAKPANTGRNMSAHRNVSV
Ga0065707_110055002	3300005295	Switchgrass Rhizosphere	MKPILYSVCIGSLALALTAGGVQAATEKRPERAKPEQRSAGVQAARPTDTGKTTSAHRNVSAAQY
Ga0070683_1018661091	3300005329	Corn Rhizosphere	MKSILYSICIGTVALALTAVGAQAATDKNKRQERAKPQQRSANVHATRPANTSRTMSAHRNVSAAQNRQRS
Ga0070670_1007455472	3300005331	Switchgrass Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGRSMAAHRNVSAAQNRQRSSYAKPR
Ga0066388_1084607721	3300005332	Tropical Forest Soil	MKSILYSVCIGTLAVALAMGGTQAATDKNKRQERAKPQQRSANVQAARPANTGRSMSAQRNVSAAQNRQRSYANVKQRTSSSAVNRVNRQASGTRAKA
Ga0070687_1011485681	3300005343	Switchgrass Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERNVARNKS
Ga0070661_1007586152	3300005344	Corn Rhizosphere	MEGNMKRILYSVCVGTLALTLTAGGAQAARDKRPERSRPQQRTATVHAARPANTGRTMNAHRNFSAAQHQQ
Ga0070669_1011724651	3300005353	Switchgrass Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTGKAKPQQRPAKVQAARPANTGRTMAAHRNVSAAQNRQ
Ga0070674_1014956422	3300005356	Miscanthus Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTERAKPQQRSVKVQAARPANTGRSMTTHRNVSATQHRQLSNAKPRTSSAVNRKPVAATRSSQR
Ga0070659_1013155192	3300005366	Corn Rhizosphere	MENMEGNMKRILYSACVGSLALALTAGGAQAARDKRPERAKPQQRTAKVHAVRPANTGRTMTAHRNVAAAQNRQRPHAKP
Ga0070713_1014086521	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGILALALTAGGAQAATDKNKRQERAKQQQRSANVHTARPANTGRTMNAHRNV
Ga0070713_1017508492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTMAAHRNVPTAQSRQQLYAKPRSSSA
Ga0070705_1003212761	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQAAKPANTGRNMSAHRNVSV
Ga0070663_1009013512	3300005455	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQQRSANVQAAKPANTGRSMAAHRNVSAAQNRQ
Ga0070699_1004061011	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGSLALALTAGGAQADKDKRSERANPQQRSAKVQATRPANTGRSMSAHRNVSAAQYRQPSYAKPHTSSNAVI
Ga0066700_106306341	3300005559	Soil	MKSILYSVCIGSLALAVTAGGAQADKDKRSERAKPQQRSAKVQAARPANTGGTMSARRNASAAQYRQRSYAK
Ga0068857_1003767043	3300005577	Corn Rhizosphere	MKSILYSICIGTVALALTAVGAQAATDKNKRQERAKPQPRSAHPAAAARPANTGRTMSAHRNVSAAQNRQRTYA
Ga0066654_103777321	3300005587	Soil	MKSILYSVCIGSLALALTAGGAQAARDKRSDNAKPQQRSAKVQAARPANTGRSMSAHHNVSAAQYRQRSYAKP
Ga0070702_1005812901	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILYSVCVGTLALTLTAGGAQAARDKRPERSRPQQRTATVHAARPANTGRTMNAHRNFSAAQHQQRPH
Ga0066903_1002175443	3300005764	Tropical Forest Soil	MKSILCSALVGSLALALATSGAQAATDKNKRQERAKPQQRSANVQAARHATTGRSMAAQRNVSAAQNRQRSYANVKQRTSSS
Ga0066903_1087130271	3300005764	Tropical Forest Soil	MKSILYSVCIGTLALALATGGAQAATDKDKRQRAKPPQQRSANVHAARPANTGRSMNAQRNVSAAQNRQRSYTQPRTSSNFVANRNARLQSMRE
Ga0066651_106259371	3300006031	Soil	MKSILYSVCIGSLVLALTAGGAQGTTEKWPERAKPQHRTANVQTAGPANAGRTVSAYRDVSAAQYRQQRPYAQPRTSSGFNRAARPALATPATVRE
Ga0066696_108695211	3300006032	Soil	MKSILYSVCVGTLALALTAGGAQAAKEKDKRPERAKPQQRTAKVQAARPANTGRTMSAHRNVSAAQNRQRSYAKPHA
Ga0066652_1012114941	3300006046	Soil	MKSILYSVCIGSLALALTAGGAQADKDKRSERAKPQQRPAKVQAARPANTGGTMSARRNASAAQYRQRSYAKP
Ga0070712_1003744243	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MENEGKNMKSILYSICIGSLALALTAGAAQAATEKRPERAKPQQRTAKVQTARPANTGRTMNAHRNVSA
Ga0070712_1006231932	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILYSVCIGSLALALTAGAAQDKRSERAKPQLRTANVHAARPANTGRTMSAHRNVSAAQYR
Ga0070712_1013791841	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSALVGSLALALATGGAQAAKDNNKRSQRAQPQQRSANVHAARPANTGRSMSAHRNVSAAQNRQRSYAMP
Ga0097621_1001556592	3300006237	Miscanthus Rhizosphere	MENMEGNMKRILYSVCVGTLALTLTAGGAQAARDKRPERSRPQQRTANVHAARPTNTGRTMTAHRNFSAAQHQQ
Ga0066665_102475294	3300006796	Soil	MKRVLYSVCIGSLALALTAGAANDNKRKPESARLQHRTANVHAARPANTMSAHRNVSAAQYRQRSYAKPRTSS
Ga0075434_1015839461	3300006871	Populus Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQAARPASTGRSMAPHRDVSAAQSRQRSYAKPRTSSNAVVKQNTGL
Ga0075424_1006743381	3300006904	Populus Rhizosphere	MKSILYSVVIGSLALALTTGAVQGATDKNKRQEKAKPQHRSATVQAARPANTARSMSAHRNVSAAQNRQRSYAQPR
Ga0099791_105900871	3300007255	Vadose Zone Soil	MQFGLTCKMENEGKIMKSILYSVCIGSVALALTAVGAQAATERRTERAKPQQRTAKVQAARPTNTGRTMSAHRNV*
Ga0066710_1017431032	3300009012	Grasslands Soil	MRRIIYSACIGTLALALTAGAAQDKDKRSERAKPQQRTAKVHAARPANTGRTMSAHRNVSAAQYRQRSYAKPHVSSNAVV
Ga0075418_108395731	3300009100	Populus Rhizosphere	MKRILYSVCIGSLALALTAAAAQDNKRKSERTRPQHRTATVQTARPANTGRSMAAHRNVSAAQSRQRSYAKPR
Ga0111538_107517262	3300009156	Populus Rhizosphere	MKAILYSVCIGSLALAVAAGGTQAATDNDQRSKKAKPQQRSANVQAARPANTGRTMSAHRVSATQSRQRSYTTP
Ga0105242_127321091	3300009176	Miscanthus Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTGKAKPQQRPAKVQAARPANTGRTMAAHRNVSATQHRQLSNAKPRTSSAVNRKPVAATRSSQ
Ga0105237_112519242	3300009545	Corn Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERNVARN
Ga0105237_118854651	3300009545	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQQRSANVQAAKPANTGRSMAAHRNV
Ga0105249_121119911	3300009553	Switchgrass Rhizosphere	MGKENHGGKNMKSILYSVCIGTLALALTAGGAQAATDKRSERAKPQQRSAKVQAARPANTGRSMSAHRNVST
Ga0134109_101933802	3300010320	Grasslands Soil	MKRVLYSVCIGSLALALTAGAAQDERSERARPQHRTAIVHAARPANTGATMSAHRNVSAAQYQQ
Ga0134109_103472922	3300010320	Grasslands Soil	MRRIIYSACIGTLALALTAGAAQDKDKRSERAKPQQRTAKVHAARPANTGRTMSAHRNVSAAQNRQRSYAKPHADSEFNRSA
Ga0134063_105532473	3300010335	Grasslands Soil	MGKRENYGGKIMKRVLYSVCIGSLALALTAGAAQDKKPERARPQHRTANVHAARPANTGATMSAHRSVSAAQYQQRSYAK
Ga0126377_132920911	3300010362	Tropical Forest Soil	MKSILYSALVGSLALALATGGAQAARDNNKRSQKAQPQQRTAKVQAARFANTGMGMAAHRNVSAAQNRQRSYANVKPRTGSTAN
Ga0134128_116021221	3300010373	Terrestrial Soil	MKAILYSVCIGILALALTAGGAQAATDKNKRQERAKPQHRTANVQAARPANTGRSMAAHRNVSAAQSRQRSYTTPHNRSVVSRKPVAATPSQRIGHGG
Ga0134124_121594171	3300010397	Terrestrial Soil	MKSILYSVCVGTLALALAAGGAQAAKDNNKRSQRAQPQQRSANVHAARPANTGRTMAAHRNVSAAQNRQ
Ga0126383_100356018	3300010398	Tropical Forest Soil	MKPILYSVLVGSLALALAAGGAQAAKDNNKRSQKAQPQQRSANVHAARPANTGRSMNMSAQRNVSAAQNRQRSY
Ga0137391_101341603	3300011270	Vadose Zone Soil	MKRVLYSVCIGSLALELTVGGAQAAKDKRSERAKPQQRTAKVQAARPANSGRIMSAHRNVSAAQ
Ga0137382_100716621	3300012200	Vadose Zone Soil	MKPILYSVCIGSLALALTAGAAQAATEKRPERAKPQHRSANVQTAGPANAGRTVSAYRDVSAAQYRQQRPYAQPRTSSGFN
Ga0137382_105998591	3300012200	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAAQDNKKKPERARPQPQHRTANVHAARPANIGGNISAHRNVSAAQYLQRSYAKPSTSSNAGVKHDIG
Ga0137376_106868662	3300012208	Vadose Zone Soil	MKRVLYSVCIGILALALTAGAAQAAKDKRSERAKPQQRTAKVQAARPANTGRTMSAHRNV
Ga0137370_109967811	3300012285	Vadose Zone Soil	MGKKEKHGGKIMKRVLYSVCIGSFALALTAGAAQDKRSERARPQHRTANVHAARPANTGATMGAHRNVSAAQYRQR
Ga0137360_105467593	3300012361	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGAAQDKRSERARPQHRTANVHAARPANTGGTMSAHRNVSAAQYRQRSYAKPR
Ga0157287_10563811	3300012885	Soil	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERN
Ga0137395_109350921	3300012917	Vadose Zone Soil	MENEGKNMKSILNSICIGSLALALTAGGAQAATEKRPERAKAQQRSANVHAARPANTGRTMSAHRNVSAAQYRQRSYAKPRTSSNAVV
Ga0137407_106304822	3300012930	Vadose Zone Soil	MKRVLYSVCIGSLALALTAGGAQAAKDKRPERAKPQQRTANVHAARPANIGRTMSAHRNVSAAQYRQRSYAK
Ga0164298_113169201	3300012955	Soil	MKSILYSACIGSLALALTAGGAQAATDKNKRQERAKPQQRSANVQAARPVNTGRTTSISTHRNVSATQNRQQRSYTNVKPRTSSAVN
Ga0164303_105824361	3300012957	Soil	MKSILYSACIGSLALALTAGGAQAATDKNKRQERAKPQQRSANVQAARPVNTGRTTSISTHRNVSATQNRQQRS
Ga0164303_114665292	3300012957	Soil	MENEGKNMNSILYSIGIGSLALALTAGGAQAAKDKRPERAKPQQRTANVQAARPANTSRTMSVHRNVSATQYRERSNAKPRN
Ga0126369_130881322	3300012971	Tropical Forest Soil	MKSILYSALVGSLALALATGGAQAATDKHKQQARAKPQQRSANVHAARPTNTGRTMSAYTHRNVSAAQNRQQR
Ga0120127_101788541	3300013503	Permafrost	MKRILYSVCIGSLALALTAGAAQDNKRKPERASPQHRTANVHAARPANTGRTMSAHRNVSAAQYRQ
Ga0157379_124098141	3300014968	Switchgrass Rhizosphere	MENMEGNMKRILYSVCVGTLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPS
Ga0157376_125401961	3300014969	Miscanthus Rhizosphere	MKSILYSACIGTLALALTAGGAQAAKDKRTERAKPQQRSTKVQAARPANTGRTMAAHRNV
Ga0173480_112319591	3300015200	Soil	MENMEGNMKRILYSVCVGTLALTLTAGGAQAARDKRPERSRPQQRTATVHAARPANTGRTMNAHRNFSAAQHQQRPHANPRTRSNAVV
Ga0132258_128046163	3300015371	Arabidopsis Rhizosphere	MKSILYSACIGTLALALTAGGAQAAKDKRTERAKPQQRSAKVQAARPANTGRTMAAHRNVSVVQPRQR
Ga0132256_1029592772	3300015372	Arabidopsis Rhizosphere	MEKGKTMEGKIMKRILYSVCIGSLALALTAGGAQAAKDKRTERAKPQQRSAKVQAAHPANTGRTMAAHRNVSATQYRQQSN
Ga0066667_117714383	3300018433	Grasslands Soil	MKRVLYSVCIGSLALALTVGAAEDNKKKPERARPQHRTANVHTARPANTGGTMSAHRNVSAAQYRQR
Ga0173482_104334221	3300019361	Soil	MKSILYSICIGSLALALTAGGAQAAKDKRPERAKPQQRTAKVQAARPANTGRTMAAHHNVSAAQYRQRSNAKPRTSSAINRKPVAATPSSQRIAKPATVRERNLAR
Ga0193705_10697362	3300019869	Soil	MKRVLYSVCIGILALALTAGAAQDNKRKPERARPQHRTAKVQTARPANTGRTMSAHRNVSAAQYRQRSY
Ga0193701_10827491	3300019875	Soil	MKSILYSVCIGIVALALTAVGAQAATDKRPERAKPQQRSAKVQAARPANTGRTMAAHRNVSAAQNRQRSYAKPRT
Ga0193725_11109911	3300019883	Soil	MKRVLYSVCVGSLALALTAGGAQAAKDKRPERAKPQQRTAKVQAARPANTGRTMSAHRNVSAAQYRQRSYAKPRTSSN
Ga0193727_11675301	3300019886	Soil	MKRILYSVCIGSIALALTAGAANDNKRKPERARPQHRTANVHAARPANTGRTISAHRNVSAAEYRQRSYAKPRTSSN
Ga0193696_10317001	3300020016	Soil	MKSILYSACIGSLALALTAGGAQAATDKRTERAKPQQRSAKVQAAHPANTGRTISAHRNVSATQHRQMSNAKPRTSSAINRKPVAATPSSQR
Ga0193721_10079551	3300020018	Soil	MKRVLYSVCVGSLALALTAGAAQDNKKKPERARPQHRTANVHAARPANTGATMSAHRNVSAAQYRQRSYAKPSTSSNAVVKHD
Ga0193721_10287181	3300020018	Soil	MKSILYSVCIGTLGLALTAGGAQADKDKRSERAKPQQRSAKVQAARPANTGAKMGVRHYNSTAQYRERSYAKPRGS
Ga0222622_113416413	3300022756	Groundwater Sediment	MKRILYSVCIGSLALALTAGAAQDKRSERAKPQHRTANVHAARPANTGRTMSAHRNVSAAQYR
Ga0193714_10039566	3300023058	Soil	MKSILYSVCIGSLALALAAGGAQAAKDKRTERAKPQQRTAKVQAARPANTGRTMSAHRNVSATQYRQRSNAKPRSSSN
Ga0207654_102979831	3300025911	Corn Rhizosphere	MKTILYTICIGSLALTLTPGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERNVARNKSTHQRNSQASRA
Ga0207695_111216851	3300025913	Corn Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERNVARNKSTHQRNSQASR
Ga0207671_111579362	3300025914	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQAAKPANTGRSMAAHRNV
Ga0207693_103442071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGSLALALTAGGAQAATQKRTERAKPQQRSAKVQAVNPANAGRTMAAHRNVSAVQPRQRSNAKPRTSSAVNRA
Ga0207663_115849951	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKSILYSVCIGSLALALTAGGAQAATQKRTERAKPQQRSAKVQAARPANTGRTMAAHRNVSAVQPRQRSNAKPRTSSAVNRAARP
Ga0207662_110318921	3300025918	Switchgrass Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPATVRERNVARNKSTHQR
Ga0207657_101672441	3300025919	Corn Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGRSMAAHRNVSAAQNRQRSSYAKPRTSSAVNRAPRQASAT
Ga0207659_101526131	3300025926	Miscanthus Rhizosphere	MKSILYSACIGTLALALTAGGAQAATDKNKRQERAKPQHRSANVQVAKPANTGRSTAEHRNVSAA
Ga0207701_111987032	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRVLYSACIGSLALALTAGAANDNKRKPERPSPQHRTANVHAARPANTGRTMSAHRNASAAQYRQPSYAKPRTSSNAVVKHNT
Ga0207686_116886672	3300025934	Miscanthus Rhizosphere	MENMEGNMKRILYSACVGSLALALTAGGAQAARDKRPERSRPQQRTATVHAARPANTGRTMNAHRNFSAAQHQQRPHANPRTRSNAVVK
Ga0207670_104370741	3300025936	Switchgrass Rhizosphere	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSAVNRKPVAATPSSHRVATPA
Ga0207712_104729303	3300025961	Switchgrass Rhizosphere	MKSILYSVCIGTLALALTTGGAQAATDKRTGKAKPQQRPAKVQAARPANTGRTMAAHRNVSATQHRQLSNAKPRTSSAVNRKPVAATRSSQR
Ga0209688_11024381	3300026305	Soil	MKRVVYSLCIGSLALALTAGGAQAATERPERAKQQHRSANVEAARPANIDRTTTAHRDVSAAQYRQQRSYAQPRTSSGFNRVARPASATPATVRERNLASNERTRERNSQE
Ga0209152_104400371	3300026325	Soil	MGKRENHGGKIMKRVLYSVCIGSLALALTAGAAQDKRSERARQQHRTANVHTARQANTGATMSAHRNVSAAQYRQRS
Ga0209804_11287362	3300026335	Soil	MKSILYSVCIGSLALALTAGGAQAPKDKRSERAKPQQRSARVQATTPANTGRAMSARRNASAAQYRQRSYAKPRGSSNAVVEHNSGL
Ga0257146_10291251	3300026374	Soil	MKSILYSVCIGSLALALTAGGAQAATEKRPERAKPQQRSAKVQAARPANTTRTTSAHRNVSAAQYRQRSYAKP
Ga0209378_12734311	3300026528	Soil	MKSILYSVCIGSLALALTAGGAQAAKDKRSERAKPQQRSAKVQAARPANTGKTMSAGRNASAAQ
Ga0209805_13612502	3300026542	Soil	MKSILYSICIGSLALALTAGGAQAATEKRPERAKPQQRTAKVQAAHPANTVRTMAAHHNVSAAQSRQLSNAK
Ga0209156_102081052	3300026547	Soil	MKSILYSVCIGSLALALTAGGAQAARDKRSDNAKPQQRSAKVQAARPANTGRSMSAHRNVSAAQYRQRSYAKPHTSSNAVVEHNSG
Ga0207434_10207671	3300026952	Soil	MKTILYTICIGSLALTLTAGGAQAAKNKQPERAKPQQRTAKVQPARPGNTGRTLAAHRNVPTAQSRQQLYAKPRSNSA
Ga0208637_10460712	3300027401	Soil	MKSILYSICIGTLALALTTGGAQAATDKRTERAKPQQRSAKVQAAHPANTGRTMAAHRNVSAAQNRQRSYAKPRTSPAINRA
Ga0209622_10680781	3300027502	Forest Soil	MKRILYSVCIGSLALALTAGAQQTRDKRTERAKPQQRSAKVQAVRPANTGRNMSAHRNVSATQNRQQRSYA
Ga0209811_103156371	3300027821	Surface Soil	MKSILYSICIGTLALALTAVGAQAATDKRTEKAKPQQRSVKVQAARPANTGRTMSAHRNVSATQH
Ga0209488_110101103	3300027903	Vadose Zone Soil	MGKKEKHGGKIMKRVLYSVCIGSLALALTAGAAQDKRSERARPQHRTANVHAARPANTGATMGAHRNVSAAQYR
Ga0209382_123203661	3300027909	Populus Rhizosphere	MKAILYSVCIGLYSVCIGSLALAVAAGGTQAATDNDQRSKKAKPQQRSANVQAARPANTGRTMSAHRV
Ga0307284_104403612	3300028799	Soil	MEKRENHGGKNMKSILYSVCIGSLALALTAGAAQDKRSERAKPQQRSANVHATRPANTGRTMSAHRNVSATQYR
Ga0307305_105376692	3300028807	Soil	MKRILYSVCIGSLALALTAGAAQDKRSERAKPQHRTANVHAARPANTGRTMSAHRNVSAAQYRQRSYAKPRTSSNAAVKHNTG
Ga0307292_101390621	3300028811	Soil	MKRILYSVCIGSLALALTAGAAQDNKKKPERARPQLETANVHAARPANTGRTMSAHRNVSAAQYRQRSYAKPRTSSNA
Ga0307304_102974051	3300028885	Soil	MENKGKNMKSILYSVCIGIVALALTAVGAQAATDKRPERAKPQQRSAKVHAARPANTGRTMAAHRNVSAAQNRQRSYAKPRTSPAIN
Ga0307468_1007327302	3300031740	Hardwood Forest Soil	MKSILYSVCIGSLALALTAGAAQDNNKKPERAKPQQRSAKVQAARPANTTRTMSAHRNVSAAQYRQRSYAKPRTGSNAV
Ga0310900_103995441	3300031908	Soil	MRSILYSVCIGSLALALTTGGAQAAKDKRTERAKPQQRTAKVQAARPANTGRTMSAHRNVSATQHRQQSNAKARTSSAVNRAARPAPAKPAT
Ga0306926_119060431	3300031954	Soil	MKSILYSLCVGTLALALTAGGAQAATDRNKQQARANPQQRSANVHAARPANTGRSMSTYRNVSAAQNQSRAAS
Ga0310890_108432022	3300032075	Soil	MKSILYSICIGSLALALTAGGAQAAKDKRTEKAKPQQRTAKVQAARPANTGRTMSAHRNVSATQHQQQSNAKARTSSAVN
Ga0310896_108299151	3300032211	Soil	MKSILYSVCIGSLALALTTGGAQAAKDKRTERAKPQQRTAKVQAARPANTGRTMSAHRNVSATQHRQQSNAKPRTSSAVNRAARPAPA
Ga0310810_112586231	3300033412	Soil	MKSTILYSALVGSLALALAIGGAQAATDRNKQQQRAKPQQRSAHVQVARPANTGRTTTMSAHRNVSAAQYRQQRSYANVKPRSSSDANRVTRSASATRTKAARPAPTTSTTIRERNLT
Ga0247830_117197661	3300033551	Soil	MKSILYSVCIGSLALALTAGGAQAAKDKRTEKAKPQQRTAKVQAARPANTGRTMSAHRNVSATQHRQQSNAKPRPSSAVNRAARPASAKPATVRERNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070402

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences