Metagenome / Metatranscriptome Family F070405

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070405
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	70 residues
Representative Sequence	MAQLLRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWVVDQQQYNRPFAHFGLFNGR
Number of Associated Samples	92
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.33 %
% of genes near scaffold ends (potentially truncated)	27.64 %
% of genes from short scaffolds (< 2000 bps)	89.43 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.122 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (27.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.61% β-sheet: 0.00% Coil/Unstructured: 46.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF05532	CsbD	11.38
PF11014	DUF2852	1.63
PF08241	Methyltransf_11	0.81
PF13586	DDE_Tnp_1_2	0.81
PF01548	DEDD_Tnp_IS110	0.81
PF03631	Virul_fac_BrkB	0.81
PF01527	HTH_Tnp_1	0.81
PF13439	Glyco_transf_4	0.81
PF13683	rve_3	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	11.38
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.12 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.12 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.12 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.50 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	91.87 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	78.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.13 %
Unclassified	root	N/A	4.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	78.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.88 %
Unclassified	root	N/A	4.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	78.86 %
Unclassified	root	N/A	4.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	78.86 %
Unclassified	root	N/A	4.88 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	78.86 %
Unclassified	root	N/A	4.88 %
Mesorhizobium sp. NBSH29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. NBSH29	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01BYIBT	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300000156\|NODE_c0347166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10100594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300000955\|JGI1027J12803_104206987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300000955\|JGI1027J12803_106089252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300000956\|JGI10216J12902_105024698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300002911\|JGI25390J43892_10057358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300004479\|Ga0062595_100651363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300004479\|Ga0062595_101652455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005178\|Ga0066688_10372682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300005178\|Ga0066688_10906584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300005187\|Ga0066675_10387110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300005332\|Ga0066388_100548302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300005332\|Ga0066388_106262273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005332\|Ga0066388_106881495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300005332\|Ga0066388_107240699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005347\|Ga0070668_100685885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300005363\|Ga0008090_14995710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300005436\|Ga0070713_100227011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1696	Open in IMG/M
3300005454\|Ga0066687_10208849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1070	Open in IMG/M
3300005546\|Ga0070696_100236474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1376	Open in IMG/M
3300005557\|Ga0066704_10709686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300005560\|Ga0066670_10011955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3760	Open in IMG/M
3300005560\|Ga0066670_10194628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1214	Open in IMG/M
3300005575\|Ga0066702_10551539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300005575\|Ga0066702_10910334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005576\|Ga0066708_10084327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1858	Open in IMG/M
3300005764\|Ga0066903_101640246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300005764\|Ga0066903_101749513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300005764\|Ga0066903_102579755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	985	Open in IMG/M
3300005764\|Ga0066903_103216112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300005937\|Ga0081455_10106543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. NBSH29	2237	Open in IMG/M
3300005937\|Ga0081455_10174161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1636	Open in IMG/M
3300005937\|Ga0081455_10471504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300005983\|Ga0081540_1024329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3517	Open in IMG/M
3300006028\|Ga0070717_11634081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300006046\|Ga0066652_100005449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7515	Open in IMG/M
3300006175\|Ga0070712_100307863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1284	Open in IMG/M
3300006791\|Ga0066653_10521216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300006796\|Ga0066665_10416394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300006806\|Ga0079220_10988313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	666	Open in IMG/M
3300006852\|Ga0075433_10974871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300006854\|Ga0075425_100820067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300006854\|Ga0075425_101077443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300006871\|Ga0075434_101667000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300006914\|Ga0075436_101459513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300009012\|Ga0066710_100459367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1911	Open in IMG/M
3300009094\|Ga0111539_11387212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300009147\|Ga0114129_10647313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300009156\|Ga0111538_11137661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300009162\|Ga0075423_12981410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300009162\|Ga0075423_13044144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300010043\|Ga0126380_11846799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300010046\|Ga0126384_10290185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1340	Open in IMG/M
3300010046\|Ga0126384_12224839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010069\|Ga0127467_119008	Not Available	544	Open in IMG/M
3300010076\|Ga0127430_101613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1192	Open in IMG/M
3300010106\|Ga0127472_1036129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1265	Open in IMG/M
3300010110\|Ga0126316_1029906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300010154\|Ga0127503_10809082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300010301\|Ga0134070_10394496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300010303\|Ga0134082_10224959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300010303\|Ga0134082_10564122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300010321\|Ga0134067_10178935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300010335\|Ga0134063_10332042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300010360\|Ga0126372_11175190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300010373\|Ga0134128_12255826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300010398\|Ga0126383_11221942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300012198\|Ga0137364_10789799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300012198\|Ga0137364_11299345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300012200\|Ga0137382_10054462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2510	Open in IMG/M
3300012200\|Ga0137382_10167791	Not Available	1496	Open in IMG/M
3300012200\|Ga0137382_10269915	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300012200\|Ga0137382_11173514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300012200\|Ga0137382_11176776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300012204\|Ga0137374_10102122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2699	Open in IMG/M
3300012204\|Ga0137374_10762050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300012208\|Ga0137376_10053460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3313	Open in IMG/M
3300012208\|Ga0137376_10210996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1681	Open in IMG/M
3300012285\|Ga0137370_10380089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300012358\|Ga0137368_10236214	All Organisms → cellular organisms → Bacteria → Proteobacteria	1273	Open in IMG/M
3300012373\|Ga0134042_1127127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1342	Open in IMG/M
3300012380\|Ga0134047_1239004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300012582\|Ga0137358_10515076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300012948\|Ga0126375_11526286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300012955\|Ga0164298_10958214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300012957\|Ga0164303_10105293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1407	Open in IMG/M
3300012957\|Ga0164303_11212506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300012971\|Ga0126369_10232888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1800	Open in IMG/M
3300015372\|Ga0132256_100960505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300015373\|Ga0132257_101700283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	809	Open in IMG/M
3300015373\|Ga0132257_102830528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300015374\|Ga0132255_100664412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1545	Open in IMG/M
3300015374\|Ga0132255_105672536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300016319\|Ga0182033_10807882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300016404\|Ga0182037_11992186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300018431\|Ga0066655_10450212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300018433\|Ga0066667_10206677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1449	Open in IMG/M
3300018433\|Ga0066667_12254797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300018468\|Ga0066662_10913374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300018468\|Ga0066662_11811678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300018482\|Ga0066669_10222551	Not Available	1466	Open in IMG/M
3300021168\|Ga0210406_10980424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300021475\|Ga0210392_10913632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300025905\|Ga0207685_10114018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1176	Open in IMG/M
3300025915\|Ga0207693_10260273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1361	Open in IMG/M
3300025939\|Ga0207665_10054310	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300025939\|Ga0207665_10500748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300026310\|Ga0209239_1052051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1843	Open in IMG/M
3300026330\|Ga0209473_1207558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300026552\|Ga0209577_10238066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1378	Open in IMG/M
3300028881\|Ga0307277_10060596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1555	Open in IMG/M
3300031723\|Ga0318493_10258595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300031910\|Ga0306923_12333082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031942\|Ga0310916_10136300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2013	Open in IMG/M
3300031945\|Ga0310913_10006823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6621	Open in IMG/M
3300031981\|Ga0318531_10446692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300032174\|Ga0307470_10255584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300032180\|Ga0307471_100430484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1454	Open in IMG/M
3300032180\|Ga0307471_101941484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.11%
Host-Associated	Host-Associated	16.26%
Engineered	Engineered	1.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.49%
Plants	Host-Associated → Plants	16.26%
Aquatic	Environmental → Aquatic	1.63%
Solid Waste	Engineered → Solid Waste	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.50%
Freshwater	Environmental → Aquatic → Freshwater	1.63%
Grass	Engineered → Solid Waste → Grass	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	13.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Composting	Engineered → Solid Waste → Grass → Composting	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.25%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010069	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00839140	2170459014	Switchgrass, Maize And Mischanthus Litter	MRRALELVMRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQLDNRRPFAHFGMFNGR
NODE_03471662	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MMPSLLRLREYVEAAKLAHQRAYSERSPHAKQILQEIERSYYRLVEIETWMVDQQQYNRPFAHFGLFNGRDARTCFAMRE
AF_2010_repII_A001DRAFT_101005942	3300000793	Forest Soil	MAQLLRFREYVEAANRARKRALSERNPHAKQILQEIERSYNRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
JGI1027J12803_1042069871	3300000955	Soil	MEYMMMPSVLRLREYVEAAKRAQQCAHDEQNPHAKQIFQEIERSYHRLVEMEKWMADQQQYNRPFAHFGMFNGRRDAGSVR*
JGI1027J12803_1060892522	3300000955	Soil	MAQLLRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLF
JGI10216J12902_1050246982	3300000956	Soil	MMPSLRLREYVEAAKFTQQRAHREQNPHAKQILQEIERSYYRLAEIEKWTVNQQPNNRPFAHFGLFDGR*
JGI25390J43892_100573582	3300002911	Grasslands Soil	MMSSLRFREYVEAANLARQRAQSEPNPHAKQILQEIERSYYRLVEIEKWTVDQQQYNRPFAHFGEVADDARSAQ*
Ga0062595_1006513632	3300004479	Soil	MTPSVLRLREYVEAAKRARQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR*
Ga0062595_1016524552	3300004479	Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEVEKWMGDQQPHKRPFGHFGMFHGQ*
Ga0066688_103726822	3300005178	Soil	MAQLLRFREYVEAANRARQRAHGERNPHAKQILQEIEQSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0066688_109065841	3300005178	Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEVEKWMGDRQPHNRPFAHFGMFNGR*
Ga0066675_103871102	3300005187	Soil	MAQLLRFREYVEAANRARQRAHGERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0066388_1005483023	3300005332	Tropical Forest Soil	MMPSPLRLREYVEAANLARQRAQSERNPHATQILHEIERSYHRLVEIEKWAVDQQQHNRPFAHFGMFNGHAART*
Ga0066388_1062622731	3300005332	Tropical Forest Soil	MAQLLRFREYVEAANRVRQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDQKQYNRPF
Ga0066388_1068814951	3300005332	Tropical Forest Soil	MPPLRFREYIEAANLRHQRAQRTKSRAKQMLQDIERSYYCLAEIEKWMVDQQQYNRPFAHFGLFNGRD
Ga0066388_1072406991	3300005332	Tropical Forest Soil	MPNKNALTGRVREYVEAAKRARHCADSARNRQAKQILHEIERSYYRLVEIEKWMVDQQQYNRPMAHFGLFNGRFATREDI
Ga0070668_1006858853	3300005347	Switchgrass Rhizosphere	MMPIVLRLREYVEAANVARERARSERKPQAKQLLQEIERCYRRLVEIEKWAVDQQQYNRPFAHFGLFN
Ga0008090_149957102	3300005363	Tropical Rainforest Soil	MMPSPLRLREYVEAANLARQRAQSERNPHATQILHEIERSYHRLVEIEKWAVDQQQYNRPFAHFGLFNG
Ga0070713_1002270114	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEFEKWMGDQQPHNRPLAHFGMFNGRQAAGDLDRG*
Ga0070708_1022170982	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMPILLRLREYVEAANVARERARSERKSQAKQVLQEIERCYRRLVEVEKWAVDQQQY
Ga0066687_102088491	3300005454	Soil	MRGGPLELVMRYAPRLREYIEAAKFVQQRADSEQNPHAKQILQEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR*
Ga0070696_1002364743	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSLRSREYIEAAKLARQRAHSEQNPYAKQILQEIERSYYRLVEFEKWMGDQQPHNRPLAHFGMFNGRQAAGDLDRG*
Ga0066704_107096861	3300005557	Soil	MMSSLRFREYVEAANLAPQRAQSEPNPHAKQILQEIERSYYRLVEIEKWTVDQQQYNRPFAHFGEVADDARSAQ*
Ga0066670_100119554	3300005560	Soil	MRQGALEWVMRPSLRLREYIEAAKLVQQRAHSEQNLYAKQILQEIERSYYRLVEVEKWMGDRQPHNRPFAHFGMFNGR*
Ga0066670_101946284	3300005560	Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQVLQEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR*
Ga0066702_105515392	3300005575	Soil	MAQLLRFREYVEAANRARQRALSERNPYAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFSGR*
Ga0066702_109103341	3300005575	Soil	MRQGALEWVMRPSLRFEYIEAAKLAQQRAHHAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR*
Ga0066708_100843275	3300005576	Soil	MRQGALEWVMRPSLRLREYIEAAKLVQQRAHSEQNLYAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR*
Ga0066903_1016402462	3300005764	Tropical Forest Soil	MAQLLRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWVVDQQQYNRPFAHFGLFNGR*
Ga0066903_1017495132	3300005764	Tropical Forest Soil	MAQLLRFREYVEAANRARKRALSERNPHAKQILQEIERSYNRLVEFEKWTVDQQQYNRPFAHFGLFNGR*
Ga0066903_1025797551	3300005764	Tropical Forest Soil	MRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLVEVEKRMGDQQPHNRRPFAHFGMFNGR*
Ga0066903_1032161122	3300005764	Tropical Forest Soil	MAQLVRFREYVEAATRARQRAQNERNPHAKQILQEIERCYHRLVEFEKWAVDRKQYNRPFVHFGLFNGR*
Ga0081455_101065435	3300005937	Tabebuia Heterophylla Rhizosphere	MALLPRFREYVEAANRARQRADGERNPHAKQILQEIERSYHRLIEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0081455_101741612	3300005937	Tabebuia Heterophylla Rhizosphere	MMPSLRLREYVEAAKFAQQHAYREQNPHAKQILQEIERSYYRLAEIEKWTVNQQPNNRPFAHFGLFDGR*
Ga0081455_104715042	3300005937	Tabebuia Heterophylla Rhizosphere	MMPSLRWREYIEAAKLAQQRAHSEQNPHAKQILQEIERSYHCLVEFEKWAVDQKQYNRPFAHFGLFNGR*
Ga0081540_10243297	3300005983	Tabebuia Heterophylla Rhizosphere	MAQLLRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDRQQYNRPFAHFGLFNGR*
Ga0070717_116340812	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMPILLRLREYVEAANVARERARSERKSQAKQVLQEIERCYRRLVEVEKWAVDQQQYNRPFAHFGLFNGH
Ga0066652_10000544910	3300006046	Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR*
Ga0070712_1003078634	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPSVLRLREYVEAAKRAQQRADGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPLAHFGLFNGHRGRV*
Ga0066653_105212162	3300006791	Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR*
Ga0066665_104163941	3300006796	Soil	MPSPLRLREYVEAANLARQRAQSERNPHAKQIFQEIERSYHRLVEIEKWAADQQQHNRPFAHFGL
Ga0079220_109883131	3300006806	Agricultural Soil	YVEAANRARQRALSERNPHAKQILQEIERSYHRLVEFEKWAVDQQRYNRPFAHFGLFNGR
Ga0075433_109748712	3300006852	Populus Rhizosphere	MRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQLDNRRPFAHFGMFNGR*
Ga0075425_1008200672	3300006854	Populus Rhizosphere	MTPSVLRLREYVEAAKRARQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFNGR*
Ga0075425_1010774431	3300006854	Populus Rhizosphere	MMPSLRFREYVEAANLAHQRAQNERNPHAKQMLQEIERSYYRLVEIEKWMVDQQQYNRPFAHFGLFN
Ga0075434_1016670002	3300006871	Populus Rhizosphere	MRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQPDNRR
Ga0075436_1014595131	3300006914	Populus Rhizosphere	RALELVMRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQLDNRRPFAHFGMFHGR*
Ga0066710_1004593673	3300009012	Grasslands Soil	MMSSLRFREYVEAANLAPQRAQSEPNPHAKQILQEIERSYYRLVEIEKWTVDQQQYNRPFAHFGEVADDARSAQ
Ga0111539_113872122	3300009094	Populus Rhizosphere	LREYVEAAKRARQRAHGEQDPHAKQILQEIERSYHRLVEFEKWAVDQQQCNRPFAHFGLFNGR*
Ga0114129_106473132	3300009147	Populus Rhizosphere	MPSLLRFSEYVEAAKLAHHRAESERNPHAKQILQEIERSYYRLVEIEKWMVDQQQYNRPFAHFGLFDGR*
Ga0111538_111376612	3300009156	Populus Rhizosphere	LREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQPDNRRSFAHFGMFNGR*
Ga0075423_129814102	3300009162	Populus Rhizosphere	LREYVEAAKRARQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR*
Ga0075423_130441441	3300009162	Populus Rhizosphere	MRRALELVMRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQLDNRRPFAHFGMFNGR*
Ga0126380_118467992	3300010043	Tropical Forest Soil	MAQLLRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDQKQYNRPFAHFGLFNGR*
Ga0126384_102901851	3300010046	Tropical Forest Soil	MMPSLRFREYVEAANLAHQRGQSERNPHAKQILQEIELSYHRLVEIEKWAMDQQQYNR
Ga0126384_122248392	3300010046	Tropical Forest Soil	MAPLLRLREYVEAANRAGQRAHGERNPYAKQILQEIERSYHRLVEFEKWAVEQQQYNRSFAQFGLFNGR*
Ga0127467_1190082	3300010069	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQVLHEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR*
Ga0127430_1016131	3300010076	Grasslands Soil	MAQLPRFREYVEAANRARQRAQGERNTHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0127472_10361293	3300010106	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDRKPFSHFGLFNGR*
Ga0126316_10299062	3300010110	Soil	MMPSLRFREYVEAAKLARHRAESERNPHAKQILQEIERSYHRLVEFEKWAADQQQYNRPFAHFGLF
Ga0127503_108090822	3300010154	Soil	MMLSLRFREYVEAAKRAQQRAHSGQNPQAKQILQEIERSYYRLAEIETWRATQQLHNRPFAHFGLFDGR*
Ga0134070_103944962	3300010301	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQVLQEIKRSYHRLIEIEKWEQQQYNRPFAHFGLFNGR*
Ga0134082_102249591	3300010303	Grasslands Soil	LREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR*
Ga0134082_105641222	3300010303	Grasslands Soil	MAQLPRFREYVEAANRARQRAHGERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0134067_101789352	3300010321	Grasslands Soil	MAQLLRFREYVEAANRARQRAQGERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0134063_103320422	3300010335	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQILQEIEQSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0126372_111751901	3300010360	Tropical Forest Soil	MMPSLRLREYVEAANLAHQRARSERNPRAKQMLQEIERSYYRLVEMEKWMVDQRQYNRPF
Ga0134128_122558262	3300010373	Terrestrial Soil	MSSPLRQYVKAAKRARHCAESERNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR*
Ga0126383_112219421	3300010398	Tropical Forest Soil	MMPSLRFREYVAAANFAHQRAQSERNPRAKQMLQDIERSYYRLIEIEKWMVDQQQYNRPFAHFGLFNG
Ga0137364_107897991	3300012198	Vadose Zone Soil	MRPSVREYVEAANRAHQCAQSEQNPHAKQILQEIKRSYHRLIEIEKWEQQQYNRPFAHFGLFDGR*
Ga0137364_112993451	3300012198	Vadose Zone Soil	MWMPNKNDLSGRVREYVEAAKRARHCADSARNRQAKQILHEIERSYYRLVEIEKWMVDQQQYNRSFAHFGLFNG
Ga0137382_100544623	3300012200	Vadose Zone Soil	MRPSLRLRKYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEVEKWMGDQQPHNRPLAHFGMFNGR*
Ga0137382_101677913	3300012200	Vadose Zone Soil	MMPSLRLREYIEAAKLVQQRDTEQNPHAKQILQEIERSYYRLVEFEKWTVDQQPNNRQFAYFGLFHGR*
Ga0137382_102699151	3300012200	Vadose Zone Soil	MMSSLRFREYVEAANLAPQRAQSEPNPHAKQILQEIERSYYRLVEIEKWTVDQQPNNRQF
Ga0137382_111735142	3300012200	Vadose Zone Soil	MAQLLRFREYVEAANRARQRALSERNPHAKQILQEIEQSYHRLVEFEKWAVGQQQYNRPFAHFGLFNGR*
Ga0137382_111767762	3300012200	Vadose Zone Soil	MMSSPLRLREYVEAANRARQRAQSERNPHAKQILQEIERCYYHLVEIEKWMVDQQQYNRPFAHFGLFNGR*
Ga0137374_101021223	3300012204	Vadose Zone Soil	MPSPCIREYVEAANRAHQCAESERNPHAKQILEEIEQSYYRLVEIEKWMVDQQQHNRPFAHFGLFDGR*
Ga0137374_107620501	3300012204	Vadose Zone Soil	MMLPSVREYVEAANRAHQRAQSERNPHAKQILQEIERSYRRLVEIEKWMVDQQQYNRPFAHSGLFDGR*
Ga0137376_100534605	3300012208	Vadose Zone Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEVEKWMGDQQPHNRPLAHFGMFNGR*
Ga0137376_102109961	3300012208	Vadose Zone Soil	MPSLRLREYIEAAKLVQQRDTEQNPHAKQILQEIERSYYRLVEFEKWTVDQQPNNRQFAYFGLFHGR*
Ga0137370_103800891	3300012285	Vadose Zone Soil	MPSLRLREYIEAAKLVQQRVHTEQNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0137368_102362142	3300012358	Vadose Zone Soil	MMLPSVREYVEAANRAHQCAESERNPHAKQILEEIEQSYYRLVEIEKWMVDQQQHNRPFAHFGLFDGR*
Ga0134042_11271274	3300012373	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR*
Ga0134047_12390042	3300012380	Grasslands Soil	VKMAQLLRFREYVEAANRARQRAHGERNPHAKQILQEIEQSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR*
Ga0137358_105150762	3300012582	Vadose Zone Soil	MPSLLRFREYVEAAKLARHRAESERSPNAKQILQEIERSYHRLVEIEKWAVHQQQYNRPFAHFGLFNGR*
Ga0126375_115262862	3300012948	Tropical Forest Soil	RLREYVEAAKFAQQRAHNEQNPHAKQILQDIERSYYRLAEIEKWTVNQQPNNRPFAHFGLFDGR*
Ga0164298_109582141	3300012955	Soil	MMTPSVLRLREYVEAAKRARQRARGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR*
Ga0164303_101052933	3300012957	Soil	LREYIKAAKRAQQCAHDEQNPHAKQIFQEIERSYHRLVEMEKCMADQQQYNRPFAHFGMFNGRRDAGGSASAWNITYPQ*
Ga0164303_112125062	3300012957	Soil	MPSLRFREYVEAANLAHQRAQNERNPHAKQMLQEIERSYYRLVEIEKWMVDQQQYNRPFAHFGLFN
Ga0126369_102328883	3300012971	Tropical Forest Soil	MPSPLRLREYVEAANLARQRAQSERNPHATQILHEIERSYHRLVEIEKWAVDQQQHNRPFAHFGMFNGHAART*
Ga0132256_1009605052	3300015372	Arabidopsis Rhizosphere	MRHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQPDNRRPFAHFGMFNGR*
Ga0132257_1017002833	3300015373	Arabidopsis Rhizosphere	MAQLLRFREYVEAANRARQRALSERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFG*
Ga0132257_1028305281	3300015373	Arabidopsis Rhizosphere	SMRRALELVMSHSPWLREYIEAAKFAQQRADSEQNPHAKRILREIERSYYRLIEVEKWMGDQQLDNRRPFAHFGMFNGR*
Ga0132255_1006644121	3300015374	Arabidopsis Rhizosphere	MSHSPWLREYIEAAKFAQQRADSEQNPHAKQILREIERSYYRLIEVEKWMGDQQPDNRRPFSHFGMFNGR*
Ga0132255_1056725361	3300015374	Arabidopsis Rhizosphere	VLRLREYVEAARRGQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFNGR*
Ga0182033_108078821	3300016319	Soil	MMMPSLRFREYIEAANLAHQRAQSERNSHTKQILQEIERSYRRLIEIEKWEQQQYNRPFAHFGLFDGR
Ga0182037_119921861	3300016404	Soil	MMPSLRFREYVEAAYLAHQRAQSERNPRAKQMLQDIERSYYRLLEIEKWMVDQQQYNRPFAHFGLFNGRDPRTCFAMR
Ga0066655_104502122	3300018431	Grasslands Soil	MPSLVRFREYVEAAKLARHRAQSERNPHAKQILQEIERSYYRLVEIEKWTVDQQQYNRPFAHFGEVADDARSAQ
Ga0066667_102066772	3300018433	Grasslands Soil	MAQLLRFREYVEAANRARQRAHGERNPHAKQILQEIERSYHRLVEFEKWAVDQQQYNRPFAHFGLFNGR
Ga0066667_122547971	3300018433	Grasslands Soil	VREYIEAAKLAKQRAHSEQNPYAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR
Ga0066662_109133742	3300018468	Grasslands Soil	MAQLLRFREYVEAANRARQRAQGERNPHAKQILQEIERCYHRLVEFEKWAVDQQQYNRPFAHFGLFNGQAARTF
Ga0066662_118116781	3300018468	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQVLQEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR
Ga0066669_102225512	3300018482	Grasslands Soil	MAQLPRFREYVEAANRARQRAQSERNPHAKQILQEIERSYHRLVEFEKWAVDRKPFAHFGLFNGR
Ga0210406_109804241	3300021168	Soil	MPLLLRFREYVEAAKLARHRAESERNPHAKQILQEIERSYHRLVEIEKWAVDQQQYNRPFAHFGLFNGHAGRTRFAMR
Ga0210392_109136321	3300021475	Soil	MMPIVLRLREYVEAANVARERARSERKPQAKQLLQEIERCYRRLVEIEKWAVDQQQYNRPFAHF
Ga0210409_111184151	3300021559	Soil	MMPSLRFREYVEAANLAHQRAQSERNPRAKQMLQDIERSYYRLVEIEKWMVDQQQYNR
Ga0207685_101140181	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEFEKWMGDQQPHNRPL
Ga0207693_102602731	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTASVLRLREYVEAAKRAQQRADGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPLAHFGLFNGHRGRV
Ga0207665_100543104	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSLRLREYIEAAKLAQQRAHSERNPHVKQILQEIERSYYRLVEIEKWTVDQQPNNRQFVHFGLFHGR
Ga0207665_105007481	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEYMMTPSVLRLREYVEAAKRARQRAHGEQNPHAKQILQEMERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR
Ga0209239_10520513	3300026310	Grasslands Soil	MMSSLRFREYVEAANLARQRAQSEPNPHAKQILQEIERSYYRLVEIEKWTVDQQQYNRPFAHFGEVADDARSAQ
Ga0209473_12075582	3300026330	Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEIEKWMGDQQPYNRPFAHFGMFNGR
Ga0209577_102380662	3300026552	Soil	MRQGALEWVMRPSLRLREYIEAAKLVQQRAHSEQNLYAKQILQEIERSYYRLVEVEKWMGDRQPHNRPFAHFGMFNGR
Ga0307277_100605963	3300028881	Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPHAKQILQEIERSYYRLVEIEKWMGNQQSYNRPLAHFGMFNGR
Ga0306917_105569302	3300031719	Soil	MMPSLLMRLREYVEAAKLARQRAYSERSPHAKQILQEIERSYYRLVEIETWMVDQQQYNR
Ga0318493_102585952	3300031723	Soil	MMTSLRVREYVEAANLAHQRARSERNPRAKQMLQEIERSYYRLVEMEKWMVDQQQYNRPFAHFGLFNGRHARTCFAMRE
Ga0306923_123330821	3300031910	Soil	MMPSLLRLREYVEAAKLARQRAYSERSSHAKQILQEIERSYYRLVEIETWTVDQQQYNRPFAHFGVV
Ga0310916_101363006	3300031942	Soil	MMPSLRFREYVEAAYLAHQRAQSERNPRAKQMLQDIERSYYRLLEIEKWMVDQQQYNRPFAHFGLFNGRD
Ga0310913_100068237	3300031945	Soil	MMTSLRVREYVEAANLAHQRARSERNPRAKQMLQEIERSYYRLVEMEKWMVDQQQYNRPFAHFGLFNGRERGRVSPCARTLCPQITAQKHH
Ga0318531_104466921	3300031981	Soil	MMTSLRVREYVEAANLAHQRARSERNPRAKQMLQEIERSYYRLVEMEKWMVDQQQYNRPFAHFGLFNGRERGR
Ga0307470_102555842	3300032174	Hardwood Forest Soil	MTPSVLRLREYVEAAKRARQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFNGR
Ga0307471_1004304843	3300032180	Hardwood Forest Soil	MMTPSVLRLREYVEAAKRARQRAHGEQNPHAKQILQEIERSYHRLVEMEKWMADQQQYNRPFAHFGLFHGR
Ga0307471_1019414841	3300032180	Hardwood Forest Soil	MRPSLRLREYIEAAKLAQQRAHSEQNPYAKQILQEIERSYYRLVEVEKWMGDQQPHNRPLAHFGMFNGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070405

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences