Metagenome / Metatranscriptome Family F070436

Basic Information
Family ID	F070436
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	40 residues
Representative Sequence	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Number of Associated Samples	91
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.40 %
% of genes near scaffold ends (potentially truncated)	23.58 %
% of genes from short scaffolds (< 2000 bps)	75.61 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (78.049 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.016 % of family members)
Environment Ontology (ENVO)	Unclassified (35.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.984 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.56% β-sheet: 0.00% Coil/Unstructured: 48.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF06904	Extensin-like_C	16.26
PF04317	DUF463	5.69
PF00355	Rieske	4.07
PF03401	TctC	1.63
PF13458	Peripla_BP_6	1.63
PF04392	ABC_sub_bind	1.63
PF00400	WD40	1.63
PF07690	MFS_1	1.63
PF00072	Response_reg	0.81
PF13191	AAA_16	0.81
PF00501	AMP-binding	0.81
PF02900	LigB	0.81
PF07045	DUF1330	0.81
PF02371	Transposase_20	0.81
PF01471	PG_binding_1	0.81
PF00005	ABC_tran	0.81
PF04442	CtaG_Cox11	0.81
PF13560	HTH_31	0.81
PF13229	Beta_helix	0.81
PF13751	DDE_Tnp_1_6	0.81
PF12704	MacB_PCD	0.81
PF08241	Methyltransf_11	0.81
PF13505	OMP_b-brl	0.81
PF00291	PALP	0.81
PF00165	HTH_AraC	0.81
PF13193	AMP-binding_C	0.81
PF00216	Bac_DNA_binding	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	16.26
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	5.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.63
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.81
COG3175	Cytochrome c oxidase assembly protein Cox11	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.05 %
Unclassified	root	N/A	21.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.05 %
Unclassified	root	N/A	21.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.05 %
Unclassified	root	N/A	21.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.92 %
Unclassified	root	N/A	21.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.98 %
Unclassified	root	N/A	21.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	57.72 %
Unclassified	root	N/A	21.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	41.46 %
Unclassified	root	N/A	21.95 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.07 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.63 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	39.02 %
Unclassified	root	N/A	21.95 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.25 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.81 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	39.02 %
Unclassified	root	N/A	21.95 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.63 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.63 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.81 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	39.02 %
Unclassified	root	N/A	21.95 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.63 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.63 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.81 %
Hyphomicrobium sp. MC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	0.81 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.81 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10079608	Not Available	1558	Open in IMG/M
3300000567\|JGI12270J11330_10109801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1165	Open in IMG/M
3300001619\|JGI20250J16331_100459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1514	Open in IMG/M
3300005538\|Ga0070731_10154011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1525	Open in IMG/M
3300005538\|Ga0070731_10333382	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005538\|Ga0070731_10422553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	887	Open in IMG/M
3300005591\|Ga0070761_10030712	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300005591\|Ga0070761_10061076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2129	Open in IMG/M
3300005602\|Ga0070762_10501607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	796	Open in IMG/M
3300005610\|Ga0070763_10007190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4418	Open in IMG/M
3300005610\|Ga0070763_10383230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	788	Open in IMG/M
3300005610\|Ga0070763_10561163	Not Available	659	Open in IMG/M
3300005712\|Ga0070764_10146676	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300005921\|Ga0070766_10119909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1580	Open in IMG/M
3300005921\|Ga0070766_10253911	Not Available	1116	Open in IMG/M
3300005921\|Ga0070766_10481173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300006028\|Ga0070717_11127469	Not Available	714	Open in IMG/M
3300006050\|Ga0075028_100032016	Not Available	2417	Open in IMG/M
3300006174\|Ga0075014_100319413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300006176\|Ga0070765_100369981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1334	Open in IMG/M
3300006176\|Ga0070765_100814409	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300006176\|Ga0070765_101658256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300006176\|Ga0070765_101881300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300006893\|Ga0073928_10030288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5221	Open in IMG/M
3300009519\|Ga0116108_1018077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	2462	Open in IMG/M
3300009519\|Ga0116108_1072433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1064	Open in IMG/M
3300009521\|Ga0116222_1390533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	605	Open in IMG/M
3300009523\|Ga0116221_1486250	Not Available	540	Open in IMG/M
3300009524\|Ga0116225_1121900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1199	Open in IMG/M
3300009636\|Ga0116112_1236816	Not Available	503	Open in IMG/M
3300010343\|Ga0074044_10299138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1058	Open in IMG/M
3300010379\|Ga0136449_103953145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300010379\|Ga0136449_104291553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	527	Open in IMG/M
3300010880\|Ga0126350_12104250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300011120\|Ga0150983_11938846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	575	Open in IMG/M
3300011120\|Ga0150983_16077504	Not Available	554	Open in IMG/M
3300012004\|Ga0120134_1117978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300014156\|Ga0181518_10016507	All Organisms → cellular organisms → Bacteria → Proteobacteria	5292	Open in IMG/M
3300014158\|Ga0181521_10140302	Not Available	1405	Open in IMG/M
3300014159\|Ga0181530_10004200	All Organisms → cellular organisms → Bacteria → Proteobacteria	15476	Open in IMG/M
3300014164\|Ga0181532_10072979	Not Available	2194	Open in IMG/M
3300014164\|Ga0181532_10099635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1813	Open in IMG/M
3300014165\|Ga0181523_10007189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8703	Open in IMG/M
3300014165\|Ga0181523_10012442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	6019	Open in IMG/M
3300014200\|Ga0181526_10349606	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300014489\|Ga0182018_10055459	Not Available	2410	Open in IMG/M
3300014489\|Ga0182018_10453659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300014501\|Ga0182024_10168746	All Organisms → cellular organisms → Bacteria → Proteobacteria	3042	Open in IMG/M
3300015089\|Ga0167643_1003775	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300016702\|Ga0181511_1122367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1320	Open in IMG/M
3300017938\|Ga0187854_10254567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	760	Open in IMG/M
3300017940\|Ga0187853_10143292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1149	Open in IMG/M
3300017946\|Ga0187879_10038555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2857	Open in IMG/M
3300019786\|Ga0182025_1265120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1737	Open in IMG/M
3300019881\|Ga0193707_1027795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1856	Open in IMG/M
3300019888\|Ga0193751_1082650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1279	Open in IMG/M
3300020021\|Ga0193726_1000013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626205	Open in IMG/M
3300020579\|Ga0210407_10664723	Not Available	809	Open in IMG/M
3300020579\|Ga0210407_10789427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300020579\|Ga0210407_11411952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	516	Open in IMG/M
3300020580\|Ga0210403_11095378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300020582\|Ga0210395_10002854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13365	Open in IMG/M
3300020583\|Ga0210401_10147281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2202	Open in IMG/M
3300020583\|Ga0210401_10540789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1027	Open in IMG/M
3300021088\|Ga0210404_10078087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1624	Open in IMG/M
3300021170\|Ga0210400_10873936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300021171\|Ga0210405_10208931	Not Available	1547	Open in IMG/M
3300021171\|Ga0210405_10228251	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300021171\|Ga0210405_10879593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	682	Open in IMG/M
3300021178\|Ga0210408_10146914	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300021401\|Ga0210393_10113870	Not Available	2159	Open in IMG/M
3300021403\|Ga0210397_10752550	Not Available	751	Open in IMG/M
3300021407\|Ga0210383_10078384	All Organisms → cellular organisms → Bacteria → Proteobacteria	2765	Open in IMG/M
3300021407\|Ga0210383_10203483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1694	Open in IMG/M
3300021407\|Ga0210383_11005627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	707	Open in IMG/M
3300021420\|Ga0210394_10016520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6975	Open in IMG/M
3300021420\|Ga0210394_10208871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1703	Open in IMG/M
3300021420\|Ga0210394_11585362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	551	Open in IMG/M
3300021420\|Ga0210394_11778780	Not Available	514	Open in IMG/M
3300021432\|Ga0210384_10824948	Not Available	826	Open in IMG/M
3300021474\|Ga0210390_10427444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300021475\|Ga0210392_10089590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2000	Open in IMG/M
3300021477\|Ga0210398_10000684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37843	Open in IMG/M
3300021478\|Ga0210402_11264496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	665	Open in IMG/M
3300021478\|Ga0210402_11508426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	599	Open in IMG/M
3300021479\|Ga0210410_11359173	Not Available	603	Open in IMG/M
3300021559\|Ga0210409_10427698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1183	Open in IMG/M
3300022523\|Ga0242663_1103092	Not Available	571	Open in IMG/M
3300022709\|Ga0222756_1088010	Not Available	516	Open in IMG/M
3300023672\|Ga0247553_103978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	738	Open in IMG/M
3300024271\|Ga0224564_1096497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	599	Open in IMG/M
3300025320\|Ga0209171_10355901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300027090\|Ga0208604_1025556	Not Available	557	Open in IMG/M
3300027334\|Ga0209529_1011384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1474	Open in IMG/M
3300027439\|Ga0209332_1006515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2396	Open in IMG/M
3300027567\|Ga0209115_1014863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1690	Open in IMG/M
3300027660\|Ga0209736_1103922	Not Available	771	Open in IMG/M
3300027678\|Ga0209011_1024498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1945	Open in IMG/M
3300027854\|Ga0209517_10008773	All Organisms → cellular organisms → Bacteria → Proteobacteria	11750	Open in IMG/M
3300027855\|Ga0209693_10131436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1238	Open in IMG/M
3300027869\|Ga0209579_10016328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4293	Open in IMG/M
3300027869\|Ga0209579_10464409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300027879\|Ga0209169_10059668	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300027889\|Ga0209380_10016638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4187	Open in IMG/M
3300027908\|Ga0209006_10691377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300027910\|Ga0209583_10261632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	768	Open in IMG/M
3300028047\|Ga0209526_10034334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3570	Open in IMG/M
3300028906\|Ga0308309_10612084	Not Available	945	Open in IMG/M
3300030659\|Ga0316363_10435800	Not Available	505	Open in IMG/M
3300030763\|Ga0265763_1000147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3546	Open in IMG/M
3300030814\|Ga0265741_121795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300031090\|Ga0265760_10168643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	726	Open in IMG/M
3300031231\|Ga0170824_116162029	Not Available	685	Open in IMG/M
3300031708\|Ga0310686_111061049	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300031715\|Ga0307476_10000879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20290	Open in IMG/M
3300032120\|Ga0316053_115437	Not Available	568	Open in IMG/M
3300032120\|Ga0316053_120772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	513	Open in IMG/M
3300032160\|Ga0311301_10458580	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300032160\|Ga0311301_10474858	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300032160\|Ga0311301_12348941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	604	Open in IMG/M
3300032515\|Ga0348332_12148300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	668	Open in IMG/M
3300032756\|Ga0315742_12401039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	599	Open in IMG/M
3300032892\|Ga0335081_11007796	Not Available	970	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.74%
Aquatic	Environmental → Aquatic	16.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.93%
Freshwater	Environmental → Aquatic → Freshwater	12.20%
Sediment	Environmental → Aquatic → Sediment	2.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.66%
Loam	Environmental → Terrestrial → Soil → Loam	24.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.25%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	14.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.63%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001619	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023672	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070436

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100796083	3300000567	Peatlands Soil	MHDWHDWMLIAAPLAAVLYFLAFQDQFRELLSWVSTLVN*
JGI12270J11330_101098012	3300000567	Peatlands Soil	VHRSSTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
JGI20250J16331_1004592	3300001619	Forest Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWISALVN*
Ga0070731_101540112	3300005538	Surface Soil	MQDWMLIAAPLALTVYFLAFQDQFRMVLSWLSMLVN*
Ga0070731_103333822	3300005538	Surface Soil	MQDWMLITAPLALTLYFLAFQDQFRALLSWLSALVN*
Ga0070731_104225532	3300005538	Surface Soil	MQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN*
Ga0070761_100307121	3300005591	Soil	SKGDLCWAALMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0070761_100610761	3300005591	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLAWLSALVN*
Ga0070762_105016072	3300005602	Soil	MQDWMLISAPLALTLYFLAFQDQFRMLLSWLSALVN*
Ga0070763_100071902	3300005610	Soil	LAHRAGEGDFCWATLMQDWMLITAPLALTLYFLAFQDQFRAVLAWLSALVN*
Ga0070763_103832302	3300005610	Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLGALVN*
Ga0070763_105611632	3300005610	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0070764_101466762	3300005712	Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWLSALVN*
Ga0070766_101199092	3300005921	Soil	MQDWMLISAPLALTVYFLAFQDQFRTLLSWLTALID*
Ga0070766_102539113	3300005921	Soil	MQDWMLITAPLAISVYFLAFQDQFRALLSWLGTLVN*
Ga0070766_104811732	3300005921	Soil	SEGDLCWAGLMQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN*
Ga0070717_111274691	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MEGDLCWATLVQDWMLISAPLALTLYFLAFQDQFRAVLSWLTALVN*
Ga0075028_1000320165	3300006050	Watersheds	LCRVTPMHDWVLITAPLAAVLYFLAFHDQFRELLSWVNALVN*
Ga0075014_1003194132	3300006174	Watersheds	VQDTAKCDLCRVTPMQDWVLITAPLAAVVYFLAFQDQFRELLSWVSTLVN*
Ga0070765_1003699813	3300006176	Soil	LGHRPTKGDFCWAGLMQDWMLITAPLALTLYFLAFQDQFRAVLAWLGALVN*
Ga0070765_1008144092	3300006176	Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLSGLVN*
Ga0070765_1016582562	3300006176	Soil	MQDWMLISAPLAITVYFLAFQDQFRAVLSWLSTLVN*
Ga0070765_1018813001	3300006176	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLGALVN*
Ga0073928_100302884	3300006893	Iron-Sulfur Acid Spring	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLSALVN*
Ga0116108_10180772	3300009519	Peatland	MHDWHDWMLIAAPLAAVLYFLAFQDQFRELLSWVSALVN*
Ga0116108_10724331	3300009519	Peatland	VHLSDTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0116222_13905332	3300009521	Peatlands Soil	MQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0116221_14862501	3300009523	Peatlands Soil	VHRSSTGDLCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0116225_11219001	3300009524	Peatlands Soil	VHRSSTGDFCWAALMQDWMLLTAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0116112_12368162	3300009636	Peatland	MGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0074044_102991382	3300010343	Bog Forest Soil	MQDWMLIAAPLALTVYFLAFQDQFRVVLSWLGALVN*
Ga0136449_1039531452	3300010379	Peatlands Soil	MQDWMLIAAPLALTVYFLAFQDQFRAVLSWLGALVN*
Ga0136449_1042915531	3300010379	Peatlands Soil	RPSKGDFCWATLMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0126350_121042502	3300010880	Boreal Forest Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWLSALIN*
Ga0150983_119388461	3300011120	Forest Soil	QDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN*
Ga0150983_160775041	3300011120	Forest Soil	FCWAGLMQDWMLISAPLALTLYFLAFQDQFRMLLSWLSALVN*
Ga0120134_11179781	3300012004	Permafrost	MQDWVLISAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0181518_100165072	3300014156	Bog	MHDWVLITAPLAAVLYFLAFQDQFRELLSWVSALVN*
Ga0181521_101403021	3300014158	Bog	MHDWVLITAPLAAVLYFLAFQDQFRELLSWVSTLVN*
Ga0181530_100042004	3300014159	Bog	MHDWHDWMLIAAPLAAVLYFLAFQDQFRELLFWVSTLVN*
Ga0181532_100729792	3300014164	Bog	MQDFILITAPLAAVLYFLAFQDQFRELLSWAAALIN*
Ga0181532_100996353	3300014164	Bog	VHRSNTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0181523_100071891	3300014165	Bog	GDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN*
Ga0181523_100124426	3300014165	Bog	MGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLS
Ga0181526_103496062	3300014200	Bog	LGHHPTEGDFCWATLMQDWMLITAPLALTLYFLAFQDQFRAVLSWLGALVN*
Ga0182018_100554593	3300014489	Palsa	MQDWMLISAPLAITVYFLAFQDQFRAVLSWLGALVN*
Ga0182018_104536592	3300014489	Palsa	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLSVLVN*
Ga0182024_101687462	3300014501	Permafrost	MPDWMLISAPLGLTVYFLAFQDQFRAVLSWLGTLVN*
Ga0167643_10037752	3300015089	Glacier Forefield Soil	MQDWMLISAPLALTLYFVAFQDQFRTLLSWLSALVN*
Ga0181511_11223674	3300016702	Peatland	VHRSSTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSW
Ga0187854_102545671	3300017938	Peatland	VHLSDTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0187853_101432922	3300017940	Peatland	VHRSSTGDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0187879_100385554	3300017946	Peatland	VHLSDTGDFCWAALMQEWMLLTAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0182025_12651204	3300019786	Permafrost	MQDWMLISAPLAITVYFLAFQDQFRAVLSWLGALVN
Ga0193707_10277952	3300019881	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLGALVN
Ga0193751_10826502	3300019888	Soil	MQDWMLISAPLALTLYFLAFQDQFRMLLSWLGALVN
Ga0193726_100001315	3300020021	Soil	MQDWMLITAPLALTLYFLAFQDQFRALLSWLGALVN
Ga0210407_106647232	3300020579	Soil	MQDWMLISAPLALTVYFLAFQDQFRTLLSWLTALID
Ga0210407_107894272	3300020579	Soil	LGAPSHEGDFCWATLMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0210407_114119522	3300020579	Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLGALVN
Ga0210403_110953782	3300020580	Soil	MQGWMLISAPLALTLYFLAFQDQFRTLLSWLGALVN
Ga0210395_1000285412	3300020582	Soil	MQDWVLITAPLAAVFYFLAFQDQFRELLSWVNAIVN
Ga0210401_101472813	3300020583	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLNALVN
Ga0210401_105407893	3300020583	Soil	MQDWMLISAPLALTLYFLAFQDQFRMLLSWLSALVN
Ga0210404_100780871	3300021088	Soil	AGLMQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN
Ga0210400_108739362	3300021170	Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWISALVN
Ga0210405_102089313	3300021171	Soil	MQDWMLIAAPLALTVYFLAFQDQFRMVLSWLSMLVN
Ga0210405_102282512	3300021171	Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWLSALVS
Ga0210405_108795931	3300021171	Soil	SSEGDFCWAGLMQDWMLISAPLALTLYFLAFQDQFRALLSWISALVN
Ga0210408_101469142	3300021178	Soil	MQDWMLISAPLALTLYFLAFQDQFRALLSWLSALVN
Ga0210393_101138703	3300021401	Soil	MQDWMLITAPLGLTVYFMVFQDQFRAVLSWLSALVN
Ga0210397_107525501	3300021403	Soil	MHDWVLITVPLAAVLYFLAFQDQFRALLSWVSALVN
Ga0210383_100783845	3300021407	Soil	LGHRPTKGDFCWAGLMQDWMLITAPLALTLYFLAFQDQFRAVLAWLSAL
Ga0210383_102034831	3300021407	Soil	MQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0210383_110056271	3300021407	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0210394_100165206	3300021420	Soil	MQDWMLIAAPLALTLYFLTFQDQFRAVLSWLSTLVN
Ga0210394_102088712	3300021420	Soil	MRDWMLISAPLALTIYFVAFQDQFGTLVSWLTALID
Ga0210394_115853622	3300021420	Soil	WAALMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0210394_117787801	3300021420	Soil	MQDWMLIAAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0210384_108249482	3300021432	Soil	MQDWMLISAPLALTLYFLAFQDQFRTVLSWLSTLVN
Ga0210390_104274442	3300021474	Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLGTLVN
Ga0210392_100895904	3300021475	Soil	AGLMQDWMLISAPLALTLYFLAFQDQFRALLSWLSALVN
Ga0210398_1000068418	3300021477	Soil	MQDWVLITAPLAAVLYFLAFQDQFRELLSWVSTMIN
Ga0210402_112644961	3300021478	Soil	SSEGDFCWATLMQDWMLISAPLALTLYFLAFQDQFRTLLSWLSGLVN
Ga0210402_115084262	3300021478	Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLSALVN
Ga0210410_113591731	3300021479	Soil	MQEWMLITAPLALTVYFLAFQDQFRAVLSWLGTLVN
Ga0210409_104276981	3300021559	Soil	MQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN
Ga0242663_11030921	3300022523	Soil	EGDFCWAGLMQDWMLISAPLALTLYFLAFQDQFRMLLSWLSALVN
Ga0222756_10880101	3300022709	Soil	LGASSQQGDLCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSVLVN
Ga0247553_1039781	3300023672	Soil	EIWAHRSSKGDFCWAALMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0224564_10964971	3300024271	Soil	MQDWMLIAAPLALTVYFLAFQDQFRAVLSWVSTLVN
Ga0209171_103559011	3300025320	Iron-Sulfur Acid Spring	DFCWATLMQDWMLISAPLALTLYFLAFQDQFRTLLSWLSALVN
Ga0208604_10255562	3300027090	Forest Soil	LGAPSHEGDFCWAMLMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0209529_10113842	3300027334	Forest Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLSWLSVLVN
Ga0209332_10065154	3300027439	Forest Soil	MRDWMLISAPLALTIYFVAFQDQFGTLLSWLTALID
Ga0209115_10148634	3300027567	Forest Soil	MQDWMLITAPLALTLYFLAFQDQFRAVLAWLGALVN
Ga0209736_11039222	3300027660	Forest Soil	MQDWVLITAPLAAMLYFLAFQDQFRALLSWVSTLVN
Ga0209011_10244981	3300027678	Forest Soil	MQDWVLISAPLAITLYFLAFQDQFRAVLSWLGTLVN
Ga0209517_100087735	3300027854	Peatlands Soil	MHDWHDWMLIAAPLAAVLYFLAFQDQFRELLSWVSTLVN
Ga0209693_101314363	3300027855	Soil	LAHRAGEGDFCWATLMQDWMLITAPLALTLYFLAFQDQFRAVLAWLSALVN
Ga0209579_100163283	3300027869	Surface Soil	MQDWMLIAAPLALTVYFLAFQDQFRTVLSWLSMLVN
Ga0209579_104644092	3300027869	Surface Soil	GDLCWAGLMQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN
Ga0209169_100596683	3300027879	Soil	LGHRPTKGDFCWAGLMQDWMLITAPLALTLYFLAFQDQFRAVLAW
Ga0209380_100166383	3300027889	Soil	MQDWMLITAPLAISVYFLAFQDQFRALLSWLGTLVN
Ga0209006_106913772	3300027908	Forest Soil	MQDWMLISAPLALTLYFLAFQDQFRALLAWLSALIN
Ga0209583_102616322	3300027910	Watersheds	MQDWVLITAPLAAALYFLAFQDQFRAVLSWVSTLVN
Ga0209526_100343342	3300028047	Forest Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLSALFN
Ga0308309_106120842	3300028906	Soil	MQDWMLISAPLALTLYFLAFQDQFRTLLSWLSGLVN
Ga0316363_104358001	3300030659	Peatlands Soil	VHRSSTGDLCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0265763_10001472	3300030763	Soil	MQDWMLISAPLALTLYFLAFQDQFRALLFWISALVN
Ga0265741_1217951	3300030814	Soil	MHDWVLITAPLAAVLYFLAFQDQFRTLLSWLSALVN
Ga0265760_101686432	3300031090	Soil	GDLCWAALMQDWMLISAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0170824_1161620293	3300031231	Forest Soil	GEGDCCWAGLMQDWMLISAPLALTLYFLAFQDQFRMLLSWLSALVN
Ga0310686_1110610492	3300031708	Soil	LAHRPIEGDLCWAKLMQDWMLIAAPLALTVYFLAFQDQFRAVLSWVSTLVN
Ga0307476_1000087917	3300031715	Hardwood Forest Soil	LAHCAAKGDLGWAALMQDWMLISAPLALTVYFVAFQDQFGMLLSWLTALID
Ga0316053_1154371	3300032120	Soil	LCWAGLMQDWMLIAAPLALTLYFLAFQDQFRALLSWVSALVN
Ga0316053_1207721	3300032120	Soil	LVQAWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0311301_104585801	3300032160	Peatlands Soil	MQDWMLITAPLALTVYFLAFQDQFRAVLSWLGALVN
Ga0311301_104748581	3300032160	Peatlands Soil	DFCWATLMQDWMLITAPLALTLYFLAFQDQFRAVLSWLSALVN
Ga0311301_123489412	3300032160	Peatlands Soil	LMQDWILIAAPLALTVYFLAFQDQFRAVLSWLGALVN
Ga0348332_121483002	3300032515	Plant Litter	FCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLSWLNALVN
Ga0315742_124010391	3300032756	Forest Soil	GDFCWAALMQDWMLITAPLALTLYFLAFQDQFRAVLAWLSALVN
Ga0335081_110077962	3300032892	Soil	MQDWMLIAAPLALTLYFLAFQDQFRMVLSWLSALVN

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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