Metagenome / Metatranscriptome Family F070455

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070455
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	92 residues
Representative Sequence	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Number of Associated Samples	105
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.16 %
% of genes near scaffold ends (potentially truncated)	52.03 %
% of genes from short scaffolds (< 2000 bps)	82.93 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.366 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.325 % of family members)
Environment Ontology (ENVO)	Unclassified (42.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.16% β-sheet: 23.16% Coil/Unstructured: 73.68%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00291	PALP	14.63
PF13396	PLDc_N	4.88
PF06202	GDE_C	4.07
PF07885	Ion_trans_2	3.25
PF13376	OmdA	2.44
PF14742	GDE_N_bis	2.44
PF03167	UDG	1.63
PF05694	SBP56	1.63
PF13424	TPR_12	1.63
PF09851	SHOCT	1.63
PF01425	Amidase	1.63
PF13088	BNR_2	0.81
PF00497	SBP_bac_3	0.81
PF02036	SCP2	0.81
PF07978	NIPSNAP	0.81
PF01957	NfeD	0.81
PF00144	Beta-lactamase	0.81
PF03631	Virul_fac_BrkB	0.81
PF02824	TGS	0.81
PF03704	BTAD	0.81
PF00089	Trypsin	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	4.07
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.63
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.63
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.63
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.63
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.81
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.81
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.37 %
Unclassified	root	N/A	14.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.37 %
Unclassified	root	N/A	14.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.37 %
Unclassified	root	N/A	14.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.10 %
Unclassified	root	N/A	14.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.85 %
Unclassified	root	N/A	14.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.20 %
Unclassified	root	N/A	14.63 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.63 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.14 %
Unclassified	root	N/A	14.63 %
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.14 %
Unclassified	root	N/A	14.63 %
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.14 %
Unclassified	root	N/A	14.63 %
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.14 %
Unclassified	root	N/A	14.63 %
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.14 %
Unclassified	root	N/A	14.63 %
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	3.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.25 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.63 %
Micromonospora sp. S4605	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. S4605	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig508830	Not Available	1836	Open in IMG/M
2170459014\|G1P06HT02HCNX0	Not Available	517	Open in IMG/M
2228664022\|INPgaii200_c1027561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300000559\|F14TC_100785457	Not Available	634	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1055609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10072581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300000890\|JGI11643J12802_10233381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300002568\|C688J35102_118516853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300002568\|C688J35102_120805422	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300002911\|JGI25390J43892_10001690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4628	Open in IMG/M
3300005166\|Ga0066674_10360717	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005166\|Ga0066674_10447928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	590	Open in IMG/M
3300005167\|Ga0066672_10692498	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005172\|Ga0066683_10117602	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300005172\|Ga0066683_10785950	Not Available	555	Open in IMG/M
3300005178\|Ga0066688_10293814	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005181\|Ga0066678_10596414	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005186\|Ga0066676_10015696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3849	Open in IMG/M
3300005294\|Ga0065705_10088864	Not Available	597	Open in IMG/M
3300005338\|Ga0068868_100268957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300005347\|Ga0070668_100127984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2036	Open in IMG/M
3300005434\|Ga0070709_10250897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300005439\|Ga0070711_100134032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1849	Open in IMG/M
3300005454\|Ga0066687_10024646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2579	Open in IMG/M
3300005457\|Ga0070662_100957008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300005553\|Ga0066695_10370918	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005563\|Ga0068855_100093334	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300005568\|Ga0066703_10054368	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300005575\|Ga0066702_10870316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	537	Open in IMG/M
3300005578\|Ga0068854_101973355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005587\|Ga0066654_10048465	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300005843\|Ga0068860_101260958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300005844\|Ga0068862_101255744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300006031\|Ga0066651_10056506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1854	Open in IMG/M
3300006046\|Ga0066652_100004405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8151	Open in IMG/M
3300006173\|Ga0070716_101616227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300006794\|Ga0066658_10441713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300006796\|Ga0066665_10662887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	829	Open in IMG/M
3300009012\|Ga0066710_102231963	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009137\|Ga0066709_102096681	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300009137\|Ga0066709_102525370	Not Available	692	Open in IMG/M
3300009553\|Ga0105249_11118095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300010044\|Ga0126310_10007175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4973	Open in IMG/M
3300010323\|Ga0134086_10078317	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300010333\|Ga0134080_10113678	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300010375\|Ga0105239_12830408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010396\|Ga0134126_11733059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300010401\|Ga0134121_11680197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300012198\|Ga0137364_10548880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300012199\|Ga0137383_10001920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12512	Open in IMG/M
3300012200\|Ga0137382_10483453	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300012200\|Ga0137382_10747929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300012201\|Ga0137365_10025318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4584	Open in IMG/M
3300012201\|Ga0137365_10032605	All Organisms → cellular organisms → Bacteria	3996	Open in IMG/M
3300012201\|Ga0137365_10625459	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012206\|Ga0137380_10252701	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300012207\|Ga0137381_10373586	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300012208\|Ga0137376_11373022	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012210\|Ga0137378_10279631	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300012211\|Ga0137377_10276931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1610	Open in IMG/M
3300012211\|Ga0137377_10812338	Not Available	868	Open in IMG/M
3300012212\|Ga0150985_114291337	Not Available	598	Open in IMG/M
3300012285\|Ga0137370_10192461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300012285\|Ga0137370_10306219	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300012285\|Ga0137370_10370986	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012350\|Ga0137372_10052320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3602	Open in IMG/M
3300012350\|Ga0137372_10257822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1369	Open in IMG/M
3300012351\|Ga0137386_10128740	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300012354\|Ga0137366_10239172	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300012356\|Ga0137371_10774361	Not Available	732	Open in IMG/M
3300012357\|Ga0137384_11048308	Not Available	655	Open in IMG/M
3300012357\|Ga0137384_11074455	Not Available	646	Open in IMG/M
3300012409\|Ga0134045_1483679	Not Available	530	Open in IMG/M
3300012469\|Ga0150984_100686163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300012958\|Ga0164299_11683928	Not Available	503	Open in IMG/M
3300012975\|Ga0134110_10511072	Not Available	547	Open in IMG/M
3300012976\|Ga0134076_10493353	Not Available	558	Open in IMG/M
3300012977\|Ga0134087_10367241	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012984\|Ga0164309_10061554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2225	Open in IMG/M
3300012985\|Ga0164308_11506496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300014166\|Ga0134079_10716846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	512	Open in IMG/M
3300014326\|Ga0157380_11126850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300015357\|Ga0134072_10356783	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300015358\|Ga0134089_10434076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	566	Open in IMG/M
3300018027\|Ga0184605_10015591	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300018054\|Ga0184621_10016083	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300018061\|Ga0184619_10032797	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300018081\|Ga0184625_10621080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300018431\|Ga0066655_10242965	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300018433\|Ga0066667_10721587	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300018433\|Ga0066667_11648387	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300018482\|Ga0066669_10720506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	879	Open in IMG/M
3300018482\|Ga0066669_11235358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	675	Open in IMG/M
3300019789\|Ga0137408_1186452	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300019789\|Ga0137408_1243126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6088	Open in IMG/M
3300019875\|Ga0193701_1013642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1626	Open in IMG/M
3300020000\|Ga0193692_1081878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300022534\|Ga0224452_1096306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300025901\|Ga0207688_10186030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300025906\|Ga0207699_10121532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1689	Open in IMG/M
3300025927\|Ga0207687_10985425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300025934\|Ga0207686_10149774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300025961\|Ga0207712_10215153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. S4605	1533	Open in IMG/M
3300025972\|Ga0207668_11953467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300026306\|Ga0209468_1177070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300026343\|Ga0209159_1232691	Not Available	564	Open in IMG/M
3300026343\|Ga0209159_1234859	Not Available	561	Open in IMG/M
3300028381\|Ga0268264_10969631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300028716\|Ga0307311_10000954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5778	Open in IMG/M
3300028721\|Ga0307315_10088083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300028722\|Ga0307319_10172393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300028782\|Ga0307306_10009751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2044	Open in IMG/M
3300028880\|Ga0307300_10084537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300031093\|Ga0308197_10344826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031716\|Ga0310813_11880282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300031938\|Ga0308175_100174095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2092	Open in IMG/M
3300031939\|Ga0308174_10947148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300031996\|Ga0308176_10210382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1837	Open in IMG/M
3300032421\|Ga0310812_10403533	Not Available	615	Open in IMG/M
3300033412\|Ga0310810_10478543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300033475\|Ga0310811_10116893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3423	Open in IMG/M
3300033475\|Ga0310811_11160690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300033475\|Ga0310811_11408496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.55%
Host-Associated	Host-Associated	14.63%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.49%
Plants	Host-Associated → Plants	14.63%
Aquatic	Environmental → Aquatic	4.06%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.50%
Sediment	Environmental → Aquatic → Sediment	4.06%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.80%
Loam	Environmental → Terrestrial → Soil → Loam	5.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_13560440	2124908045	Soil	MSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPRGNGQPA
2PV_01253900	2170459014	Switchgrass, Maize And Mischanthus Litter	MSTSTHIRVFGPNLSELAQRDGLFHVHADDCPDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
INPgaii200_10275611	2228664022	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGE
F14TC_1007854571	3300000559	Soil	MSTGTHIRVFGPNLSELAQLDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPC
AP72_2010_repI_A01DRAFT_10556092	3300000579	Forest Soil	VSVVVRVFGPNLSEEAQREGQFHVHADECPDKQLYGPEGKFGGEDDYGDRITVSSREEIVKFVYPPGRFGYE
AF_2010_repII_A1DRAFT_100725812	3300000597	Forest Soil	VSVVVRVFGPNLSEEAQREGQFHVHADECPDKQLYGPEGKFGGEDDYGDRITVSSREEIVKFVYPPGRFGYEEPDWREFDDLYVAPCVSLPDE*
JGI11643J12802_102333811	3300000890	Soil	MSTSTHIRVFGPNLSELAQRDGLFHVHADDCPDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVASCVSLPDEAA*
C688J35102_1185168531	3300002568	Soil	CVSIKVRVFGPNLSELAQQQGQFHVHADDCPDHRDYGPEAKLGGVDDYGARLTVSSREEIVKYVYPPGEFGYEEPNWREFDDLYVAPCVTLQEDAPR*
C688J35102_1208054222	3300002568	Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
JGI25390J43892_100016906	3300002911	Grasslands Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066674_103607171	3300005166	Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVA
Ga0066674_104479281	3300005166	Soil	MTLDAGLRATIKRDKFGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGHRITVSSREEIVKFVYPPGEFGYGEPDWREFDDLYVAPCVSLPDEAPRGNGQP
Ga0066672_106924982	3300005167	Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGE
Ga0066683_101176021	3300005172	Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066683_107859501	3300005172	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGY
Ga0066688_102938141	3300005178	Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDAKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066678_105964141	3300005181	Soil	EAVAMTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066676_100156965	3300005186	Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLTVSSREELVKFVYPPGEFGY
Ga0065705_100888641	3300005294	Switchgrass Rhizosphere	MSTSTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEADWREFDDLYVAQCVSLPDEAA*
Ga0068868_1002689572	3300005338	Miscanthus Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0070668_1001279841	3300005347	Switchgrass Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0070709_102508972	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0070711_1001340322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0066687_100246462	3300005454	Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYIAPCVSLPDEVAS*
Ga0070662_1009570082	3300005457	Corn Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFEDLYVAPCVSLPDEAA*
Ga0066695_103709181	3300005553	Soil	MTLDAGLRATIKRDKFGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGHRITVSSREEIVKFVYPPGEFGYGEPDWREFDDLYVAPCVSLPDEAPRGNGQPA*
Ga0068855_1000933343	3300005563	Corn Rhizosphere	MSTSTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0066703_100543682	3300005568	Soil	MTTHVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066702_108703162	3300005575	Soil	MTTHVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDSKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0068854_1019733551	3300005578	Corn Rhizosphere	TTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0066654_100484651	3300005587	Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGNFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0068860_1012609581	3300005843	Switchgrass Rhizosphere	MSTSTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLY
Ga0068862_1012557442	3300005844	Switchgrass Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYIAPCVSLPDEAA*
Ga0066651_100565062	3300006031	Soil	VSTKVRVFGPNLSEVAQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFGYEEPDWREFDDLYVAPCVTLPEDAPR*
Ga0066652_1000044056	3300006046	Soil	VRVFGPNLSEVAQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFGYEEPDWREFDDLYVAPCVTLPEDAPR*
Ga0070716_1016162271	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWR
Ga0066658_104417131	3300006794	Soil	QRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066665_106628872	3300006796	Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPAHRDYGPDSKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0066710_1022319632	3300009012	Grasslands Soil	MTIQVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0066709_1020966811	3300009137	Grasslands Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEDCPDHRGCGPDGKFSGVDDYGERLIVSSREELVKFVYPPGEFGYEEPDWREFDD
Ga0066709_1025253701	3300009137	Grasslands Soil	ESTRLDDARRRAAGTLKREAVAMTAHVRVFGPNLSELAQQHGQFHIPAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0105249_111180951	3300009553	Switchgrass Rhizosphere	MSTSTHIRVFGPNLSELAQRDVQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAP
Ga0126310_100071752	3300010044	Serpentine Soil	VSTKVRVFGPNLSELAQQQGQFHVHADDCPDHRDYGPEGKLGGVDDYGARLTASSREEIVKFVYPPGEFGYEEPEWREFDDLYVAPCVTLPEEVPR*
Ga0134086_100783171	3300010323	Grasslands Soil	MTIQVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGE
Ga0134080_101136782	3300010333	Grasslands Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0105239_128304081	3300010375	Corn Rhizosphere	MGTHIRVFGPNLSELAHRDGQVHVDADECADHQHYGPAGKFGGIDEYGDRLTDSSREEIVKLVCTPGEFGYAEPDWREFDDVYIAPCV
Ga0134126_117330592	3300010396	Terrestrial Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYIAPCVSLPDEAA*
Ga0134121_116801971	3300010401	Terrestrial Soil	RVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0137364_105488802	3300012198	Vadose Zone Soil	MRVRVFGPNLSELAQEQGQFHVHAEDCTDHQDYGPEGKFGGIDDYGARLSVSSREEIVKYVYPPGDFGYEEPDWREFDDLYVAPCVSLPEEVAK*
Ga0137383_1000192011	3300012199	Vadose Zone Soil	MTAHVRVFGPNLSELAQQDGQFHIHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137382_104834531	3300012200	Vadose Zone Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWRE
Ga0137382_107479292	3300012200	Vadose Zone Soil	GVRRDQAESACVSTKVRVFGPNLSEVAQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFGYEEPDWREFDDLYVAPCVTLPEDAPR*
Ga0137365_100253183	3300012201	Vadose Zone Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPQGNGQPA*
Ga0137365_100326055	3300012201	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGERLTVSSREELVKFVYPPG
Ga0137365_106254591	3300012201	Vadose Zone Soil	MTAHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137380_102527011	3300012206	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCADHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137381_103735861	3300012207	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFSGVDDYGERLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137376_113730221	3300012208	Vadose Zone Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPD
Ga0137378_102796311	3300012210	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137377_102769311	3300012211	Vadose Zone Soil	RYRVEEREAVAMTAHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGQRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137377_108123381	3300012211	Vadose Zone Soil	TIKREAVAMTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0150985_1142913371	3300012212	Avena Fatua Rhizosphere	VSIKVRVFGPNLSELAQQQGQFHVHADDCPDHRDYGPEAKLGGVDDYGARLTVSSREEIVKYVYPPGEFGYEEPNWREFDDLYVAPCVTLQEDAPRW
Ga0137370_101924612	3300012285	Vadose Zone Soil	MTPDAALKGTVKSAKSGMSTSTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDL*
Ga0137370_103062192	3300012285	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPP
Ga0137370_103709862	3300012285	Vadose Zone Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPP
Ga0137372_100523201	3300012350	Vadose Zone Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPQGNGQPA*
Ga0137372_102578221	3300012350	Vadose Zone Soil	RRRDAGVRREQTGDAGMTVKVRLFGPNLSELAQRDGQFHVHAEDCPDHRDYGPEAKFGGVDDYGAKLTVSSREELVKYVYPPGEFGYEEPDWREFDDLYVAPCVSLPEEVA*
Ga0137386_101287401	3300012351	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAA
Ga0137366_102391722	3300012354	Vadose Zone Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLTVSSREELVKFVYPPGEFGFEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137371_107743611	3300012356	Vadose Zone Soil	QDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLTVSSREELVKFVYPPGEFGFEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137384_110483081	3300012357	Vadose Zone Soil	MGTRIRVFGPNLSELAQRDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEVAS*
Ga0137384_110744551	3300012357	Vadose Zone Soil	HVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFSGVDDYGERLIVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0134045_14836791	3300012409	Grasslands Soil	MSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPRGNGQPA*
Ga0150984_1006861631	3300012469	Avena Fatua Rhizosphere	VSIKVRVFGPNLSELAQQQGQFHVHADDCPDHRDYGPEAKLGGVDDYGARLTVSSREEIVKYVYPPGEFGYEEPNW
Ga0164299_116839281	3300012958	Soil	RESSRSDDARRGAAGHDQGAKSGMSTSTHIRVFGPNLSELAQRDGQFHVHADDCVDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0134110_105110721	3300012975	Grasslands Soil	MTLDAGLRATIKRDKFGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGDRITVSSREEIVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0134076_104933532	3300012976	Grasslands Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLIVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0134087_103672411	3300012977	Grasslands Soil	VTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS*
Ga0164309_100615544	3300012984	Soil	MRTSTHIRVFGPNLSELAQRDGQFHVHADDCADHEHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0164308_115064962	3300012985	Soil	MSMRTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0134079_107168461	3300014166	Grasslands Soil	MTLDAGLRATIKRDKFGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGDRLTVSSREELVKFVYPPGEF
Ga0157380_111268503	3300014326	Switchgrass Rhizosphere	MRTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA*
Ga0134072_103567832	3300015357	Grasslands Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYP
Ga0134089_104340761	3300015358	Grasslands Soil	MTTHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWR
Ga0184605_100155911	3300018027	Groundwater Sediment	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYWPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0184621_100160831	3300018054	Groundwater Sediment	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDGAA
Ga0184619_100327971	3300018061	Groundwater Sediment	RRCRARSRMTTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0184625_106210802	3300018081	Groundwater Sediment	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREF
Ga0066655_102429651	3300018431	Grasslands Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0066667_107215872	3300018433	Grasslands Soil	MTTQVRVFGPNLSELAQRAGQLHVHAEGCPDHRDHGPDGKLGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0066667_116483871	3300018433	Grasslands Soil	MTTQVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREEL
Ga0066669_107205062	3300018482	Grasslands Soil	MTLDAGLRATIKRDKFGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPQGNGQ
Ga0066669_112353581	3300018482	Grasslands Soil	MTAHVRVFGPNLSELAQQDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGERLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0137408_11864522	3300019789	Vadose Zone Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVA
Ga0137408_12431265	3300019789	Vadose Zone Soil	MTTPVRVFGPNLSELAQRDGQFHVHAEGCPDHRDYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0193701_10136422	3300019875	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0193692_10818782	3300020000	Soil	QRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0224452_10963061	3300022534	Groundwater Sediment	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDW
Ga0207688_101860302	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0207699_101215322	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0207687_109854252	3300025927	Miscanthus Rhizosphere	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYIAPCVSLPDEAA
Ga0207686_101497742	3300025934	Miscanthus Rhizosphere	MTTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYIAPCVSLPDEAA
Ga0207712_102151533	3300025961	Switchgrass Rhizosphere	LAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYIAPCVSLPDEAA
Ga0207668_119534671	3300025972	Switchgrass Rhizosphere	ELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0209468_11770701	3300026306	Soil	VGQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFRYEEPDWREFDDLYVAPCVTLPEDAPR
Ga0209159_12326911	3300026343	Soil	MTAHVRVFGPNLSELAQQDGQFHVHAEGCPDQRNYGPDGKFGGVDDYGDRLTVSSREELVKFVYPPGEFGYEEPDWREFDDLYVAPCVSLPDEVAS
Ga0209159_12348591	3300026343	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCPDHQHYGPEGKFGGVDDYGHRITVSSREEIVKFVYPPGEFGYGEPDWREFDDLYVAPCVSLP
Ga0268264_109696311	3300028381	Switchgrass Rhizosphere	DGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0307311_100009547	3300028716	Soil	NLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0307315_100880831	3300028721	Soil	SRMTTMGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0307319_101723932	3300028722	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDE
Ga0307306_100097513	3300028782	Soil	MSTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAA
Ga0307300_100845372	3300028880	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEP
Ga0308197_103448262	3300031093	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSL
Ga0310813_118802821	3300031716	Soil	MSTSTHIRVFGPNLSELAQRDGLFHVHADDCPDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAP
Ga0308175_1001740951	3300031938	Soil	VSTKVRVFGPNLSEVGQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEF
Ga0308174_109471481	3300031939	Soil	VRVFGPNLSELAQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFGYEEPDWREFDDL
Ga0308176_102103822	3300031996	Soil	VRVFGPNLSELAQQQGQFHVHADDCADHRDYGPEGKLGGVDDYGARLTVSSREEIVKFVYPPGEFGYEEPDWREFDDLYVAPCVTLPEEVPR
Ga0310812_104035331	3300032421	Soil	MSTSTHIRVFGPNLSELAQRDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPRGNGQPA
Ga0310810_104785432	3300033412	Soil	MSTSTHIRVFGPNLSELAQRDGLFHVHADDCPDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVASCVSLPDEAA
Ga0310811_101168931	3300033475	Soil	MSTSTHIRVFGPNLSELAQRDGLFHVHADDCPDHQHYGPEGKFGGIDDYGDRITVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAS
Ga0310811_111606901	3300033475	Soil	VQCTVRPIVEAPKRQERESSRSDDARRGAAGHDQRAKSGMSTGTHIRVFGPNLSELAQRDGQFHVHADDCPDHEHYGPEGKFGGIDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREFDDLYVAPCVSLPDEAPRGNGQPA
Ga0310811_114084961	3300033475	Soil	MGTHIRVFGPNLSELAQRDGQFHVHADDCADHQHYGPEGKFGGVDDYGDRLTVSSREEIVKFVYPPGEFGYAEPDWREF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences