Metagenome / Metatranscriptome Family F070491

Basic Information
Family ID	F070491
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	78 residues
Representative Sequence	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Number of Associated Samples	99
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.46 %
% of genes near scaffold ends (potentially truncated)	29.27 %
% of genes from short scaffolds (< 2000 bps)	90.24 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (71.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.951 % of family members)
Environment Ontology (ENVO)	Unclassified (26.016 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.341 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.50% β-sheet: 0.00% Coil/Unstructured: 27.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF01135	PCMT	1.63
PF00196	GerE	1.63
PF00578	AhpC-TSA	1.63
PF04780	DUF629	0.81
PF04392	ABC_sub_bind	0.81
PF05050	Methyltransf_21	0.81
PF03006	HlyIII	0.81
PF08534	Redoxin	0.81
PF13276	HTH_21	0.81
PF02056	Glyco_hydro_4	0.81
PF13683	rve_3	0.81
PF00528	BPD_transp_1	0.81
PF04519	Bactofilin	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.63
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.63
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.63
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	0.81
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
All Organisms	root	All Organisms	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
cellular organisms	root	All Organisms → cellular organisms	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.25 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.25 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.20 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.25 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.20 %
Anaerolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea	0.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.20 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.81 %
Anaerolinea thermolimosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermolimosa	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z02IRCQY	Not Available	506	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10010539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2548	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1005345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2445	Open in IMG/M
3300002914\|JGI25617J43924_10297859	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300002917\|JGI25616J43925_10169088	Not Available	863	Open in IMG/M
3300005165\|Ga0066869_10019969	Not Available	1003	Open in IMG/M
3300005167\|Ga0066672_10313052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300005177\|Ga0066690_10197823	Not Available	1336	Open in IMG/M
3300005332\|Ga0066388_103386213	Not Available	814	Open in IMG/M
3300005332\|Ga0066388_103812471	Not Available	769	Open in IMG/M
3300005332\|Ga0066388_104199254	Not Available	734	Open in IMG/M
3300005440\|Ga0070705_100832717	Not Available	737	Open in IMG/M
3300005445\|Ga0070708_102056115	Not Available	528	Open in IMG/M
3300005467\|Ga0070706_100186135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1940	Open in IMG/M
3300005467\|Ga0070706_100739618	Not Available	911	Open in IMG/M
3300005467\|Ga0070706_101872828	Not Available	544	Open in IMG/M
3300005468\|Ga0070707_100082497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3105	Open in IMG/M
3300005471\|Ga0070698_101345748	Not Available	664	Open in IMG/M
3300005518\|Ga0070699_100995892	Not Available	768	Open in IMG/M
3300005536\|Ga0070697_100288765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300005536\|Ga0070697_100455821	Not Available	1114	Open in IMG/M
3300005545\|Ga0070695_101371003	Not Available	586	Open in IMG/M
3300005556\|Ga0066707_10676575	Not Available	649	Open in IMG/M
3300005764\|Ga0066903_101101391	Not Available	1464	Open in IMG/M
3300005764\|Ga0066903_101609257	Not Available	1232	Open in IMG/M
3300005764\|Ga0066903_102550691	Not Available	990	Open in IMG/M
3300005764\|Ga0066903_102897095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300006028\|Ga0070717_10274192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1494	Open in IMG/M
3300006173\|Ga0070716_100470534	Not Available	921	Open in IMG/M
3300007255\|Ga0099791_10419556	Not Available	645	Open in IMG/M
3300007265\|Ga0099794_10596131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300009012\|Ga0066710_104051064	Not Available	548	Open in IMG/M
3300009038\|Ga0099829_10508763	Not Available	1000	Open in IMG/M
3300009089\|Ga0099828_11041090	Not Available	728	Open in IMG/M
3300009090\|Ga0099827_11065355	Not Available	702	Open in IMG/M
3300009090\|Ga0099827_11178705	Not Available	666	Open in IMG/M
3300009143\|Ga0099792_10096293	Not Available	1545	Open in IMG/M
3300009162\|Ga0075423_10460256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300009162\|Ga0075423_12563628	Not Available	557	Open in IMG/M
3300009792\|Ga0126374_10965715	Not Available	666	Open in IMG/M
3300010047\|Ga0126382_10639841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermolimosa	882	Open in IMG/M
3300010326\|Ga0134065_10144452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300010358\|Ga0126370_10572744	Not Available	969	Open in IMG/M
3300010359\|Ga0126376_10895084	Not Available	877	Open in IMG/M
3300010359\|Ga0126376_12338356	Not Available	581	Open in IMG/M
3300010362\|Ga0126377_10746521	Not Available	1034	Open in IMG/M
3300010376\|Ga0126381_101682667	Not Available	916	Open in IMG/M
3300010398\|Ga0126383_10443296	Not Available	1346	Open in IMG/M
3300011106\|Ga0151489_1535806	Not Available	675	Open in IMG/M
3300012189\|Ga0137388_10139470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2133	Open in IMG/M
3300012199\|Ga0137383_10723056	Not Available	727	Open in IMG/M
3300012201\|Ga0137365_11051686	Not Available	588	Open in IMG/M
3300012206\|Ga0137380_11106235	Not Available	675	Open in IMG/M
3300012206\|Ga0137380_11633080	Not Available	529	Open in IMG/M
3300012209\|Ga0137379_10219681	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300012210\|Ga0137378_11581971	Not Available	565	Open in IMG/M
3300012211\|Ga0137377_10716504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300012350\|Ga0137372_10151852	All Organisms → cellular organisms → Bacteria → Proteobacteria	1891	Open in IMG/M
3300012353\|Ga0137367_10306819	Not Available	1135	Open in IMG/M
3300012357\|Ga0137384_11197709	Not Available	604	Open in IMG/M
3300012359\|Ga0137385_10058984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3423	Open in IMG/M
3300012359\|Ga0137385_10557794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300012532\|Ga0137373_10956594	Not Available	624	Open in IMG/M
3300012582\|Ga0137358_10349132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300012582\|Ga0137358_10353921	Not Available	995	Open in IMG/M
3300012917\|Ga0137395_10537011	Not Available	843	Open in IMG/M
3300012930\|Ga0137407_12313283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300012961\|Ga0164302_10426915	Not Available	913	Open in IMG/M
3300012984\|Ga0164309_10131484	Not Available	1635	Open in IMG/M
3300012986\|Ga0164304_11139023	Not Available	627	Open in IMG/M
3300012988\|Ga0164306_10399563	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300015373\|Ga0132257_103498692	Not Available	571	Open in IMG/M
3300016270\|Ga0182036_11370557	Not Available	591	Open in IMG/M
3300016294\|Ga0182041_10659247	Not Available	925	Open in IMG/M
3300016371\|Ga0182034_10412541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300016422\|Ga0182039_11682121	Not Available	580	Open in IMG/M
3300018433\|Ga0066667_11132293	Not Available	678	Open in IMG/M
3300018482\|Ga0066669_10377377	Not Available	1190	Open in IMG/M
3300020580\|Ga0210403_10784155	Not Available	759	Open in IMG/M
3300021178\|Ga0210408_10195320	Not Available	1609	Open in IMG/M
3300021178\|Ga0210408_10237140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1452	Open in IMG/M
3300021479\|Ga0210410_10450192	Not Available	1152	Open in IMG/M
3300021560\|Ga0126371_10502167	Not Available	1361	Open in IMG/M
3300021560\|Ga0126371_10647543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1205	Open in IMG/M
3300021560\|Ga0126371_11242226	Not Available	880	Open in IMG/M
3300025885\|Ga0207653_10042593	All Organisms → cellular organisms → Bacteria → Proteobacteria	1493	Open in IMG/M
3300025910\|Ga0207684_10322047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300025910\|Ga0207684_10399260	Not Available	1182	Open in IMG/M
3300025922\|Ga0207646_11346552	Not Available	622	Open in IMG/M
3300025928\|Ga0207700_10907522	Not Available	788	Open in IMG/M
3300025932\|Ga0207690_11416561	Not Available	581	Open in IMG/M
3300025939\|Ga0207665_10171099	Not Available	1569	Open in IMG/M
3300026304\|Ga0209240_1038483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1816	Open in IMG/M
3300026319\|Ga0209647_1141740	Not Available	1042	Open in IMG/M
3300026343\|Ga0209159_1230584	Not Available	567	Open in IMG/M
3300026498\|Ga0257156_1122466	Not Available	541	Open in IMG/M
3300026514\|Ga0257168_1062626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300026552\|Ga0209577_10608468	Not Available	651	Open in IMG/M
3300027061\|Ga0209729_1040214	Not Available	589	Open in IMG/M
3300027882\|Ga0209590_10477791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300027903\|Ga0209488_10098340	Not Available	2191	Open in IMG/M
3300028047\|Ga0209526_10030673	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300028047\|Ga0209526_10441173	Not Available	858	Open in IMG/M
3300028047\|Ga0209526_10910735	Not Available	534	Open in IMG/M
3300028878\|Ga0307278_10401213	Not Available	602	Open in IMG/M
3300031543\|Ga0318516_10045426	Not Available	2376	Open in IMG/M
3300031543\|Ga0318516_10052936	Not Available	2213	Open in IMG/M
3300031545\|Ga0318541_10646707	Not Available	591	Open in IMG/M
3300031545\|Ga0318541_10821723	Not Available	518	Open in IMG/M
3300031572\|Ga0318515_10565989	Not Available	605	Open in IMG/M
3300031668\|Ga0318542_10516391	Not Available	621	Open in IMG/M
3300031754\|Ga0307475_10958673	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300031819\|Ga0318568_11059262	Not Available	501	Open in IMG/M
3300031910\|Ga0306923_12295584	Not Available	538	Open in IMG/M
3300031941\|Ga0310912_10088337	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300031941\|Ga0310912_10157534	Not Available	1717	Open in IMG/M
3300031946\|Ga0310910_10082060	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300031946\|Ga0310910_10206923	Not Available	1523	Open in IMG/M
3300032035\|Ga0310911_10410754	Not Available	783	Open in IMG/M
3300032052\|Ga0318506_10077153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1392	Open in IMG/M
3300032180\|Ga0307471_102625267	Not Available	638	Open in IMG/M
3300032205\|Ga0307472_102526982	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.75%
Host-Associated	Host-Associated	3.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.75%
Plants	Host-Associated → Plants	3.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.36%
Loam	Environmental → Terrestrial → Soil → Loam	24.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_07503990	2170459004	Grass Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
AF_2010_repII_A1DRAFT_100105391	3300000597	Forest Soil	LLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKRTQ*
AF_2010_repII_A100DRAFT_10053453	3300000655	Forest Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQNERVRAGGQPIDVTRVHITDAGRRALKGKRTQ*
JGI25617J43924_102978592	3300002914	Grasslands Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAEY*
JGI25616J43925_101690881	3300002917	Grasslands Soil	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAG*
Ga0066869_100199691	3300005165	Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066672_103130522	3300005167	Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTFDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066690_101978232	3300005177	Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMIQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066388_1033862131	3300005332	Tropical Forest Soil	VLELLVGSAQQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIEVTRVHITNAGRRALRGKRTQ*
Ga0066388_1038124712	3300005332	Tropical Forest Soil	MAARSTTDQRRALELLAGSAKQGCTEAFLLAHGFTVELLADMVRAGLATAQIERAHFGGQTRVHISDAGRRALRTKRTQ*
Ga0066388_1041992541	3300005332	Tropical Forest Soil	MAAQSAIHQRRALELLAASAKQGCTEAFLLAHGFTLGLLTDMVRAGLATAQNERFGQTRLHITDAGRRALRGKRHAE*
Ga0070705_1008327171	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070708_1020561152	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRLFSLSGNSLMAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070706_1001861351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLIDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKR
Ga0070706_1007396181	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLAAAQIERARAGGQTRLHITEAGRRALRGKRDAG*
Ga0070706_1018728282	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070707_1000824974	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAE*
Ga0070698_1013457481	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQPATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAE*
Ga0070699_1009958922	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070697_1002887651	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLIDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070697_1004558213	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAEY*
Ga0070695_1013710031	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LELLAVSGRQGCTEAFLLAHGFTLDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066707_106765751	3300005556	Soil	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066903_1011013912	3300005764	Tropical Forest Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARADGQTRLHITDAGRRALRGKRDAQ*
Ga0066903_1016092572	3300005764	Tropical Forest Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLRAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0066903_1025506912	3300005764	Tropical Forest Soil	MAVQSAIHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQNERFGQTRLHITDAGRRALRGKRDAE*
Ga0066903_1028970953	3300005764	Tropical Forest Soil	MATPSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGRQTRLHITEAGRRALRG*
Ga0070717_102741922	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLIDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0070716_1004705343	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQSATHQRRALELLAASAKKGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0099791_104195562	3300007255	Vadose Zone Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0099794_105961311	3300007265	Vadose Zone Soil	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDLVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAEY*
Ga0066710_1040510642	3300009012	Grasslands Soil	MAVQSATHQRRALELLAASAKQGCLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0099829_105087631	3300009038	Vadose Zone Soil	RSCGVRLFSLSGNSLMAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0099828_110410901	3300009089	Vadose Zone Soil	MATHQRRALELLAASAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAE*
Ga0099827_110653551	3300009090	Vadose Zone Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0099827_111787052	3300009090	Vadose Zone Soil	LTQQSDTDRRRALELLAGGAKQGCTEAFLLAHGFTVKLLAEMVRAGLATAQIEAARAGSQTRVHITDAGRRALSPGRAK*
Ga0099792_100962932	3300009143	Vadose Zone Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY*
Ga0075423_104602561	3300009162	Populus Rhizosphere	MAAQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAG*
Ga0075423_125636282	3300009162	Populus Rhizosphere	ELLAASAKQGCTEAFLLAHGCTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0126374_109657152	3300009792	Tropical Forest Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDSE*
Ga0126380_106336621	3300010043	Tropical Forest Soil	DGRRVLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKRTQ*
Ga0126382_106398413	3300010047	Tropical Forest Soil	LVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATVQIERVRAGGQPIEVTRVHITDAGRRALRGKARND*
Ga0134065_101444521	3300010326	Grasslands Soil	MAVQSATPQRRAVELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRA
Ga0126370_105727441	3300010358	Tropical Forest Soil	MAVQSAIHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0126376_108950842	3300010359	Tropical Forest Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQIERVRAGGQPIEVTRVHITDVGRRALKGKRTQ*
Ga0126376_123383561	3300010359	Tropical Forest Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDADRRALRGKRDAE*
Ga0126377_107465212	3300010362	Tropical Forest Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKRTQ*
Ga0126381_1016826672	3300010376	Tropical Forest Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQIERVRAGGQPIEVTRVHITDVGRQALKGKRTQ*
Ga0126383_104432962	3300010398	Tropical Forest Soil	LLAGSARQGCTEAFLSAHGFTVDLLADMVRVGFATAQIERVRAGGQPIEVTRVHITDAGRRALRGKARND*
Ga0151489_15358061	3300011106	Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMARAGLATAQIERARAGGQTRLHITDAGRRALRG
Ga0137388_101394703	3300012189	Vadose Zone Soil	MATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAEY*
Ga0137383_107230561	3300012199	Vadose Zone Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0137365_110516861	3300012201	Vadose Zone Soil	MAAQSATDQRRALELLAGSAKQGCTEAFLLAHGFTVELLADMVRAGLATAQIERALFGGQTRVHITDAGRRALRTKRTQ*
Ga0137380_111062351	3300012206	Vadose Zone Soil	AASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0137380_116330801	3300012206	Vadose Zone Soil	MAAQSATDQRRALKLLAGSAKQGCTEAFLLAHGFTVELLADMVRAGLATAQIERAYFGGQTRVHITDAGRRAL
Ga0137379_102196813	3300012209	Vadose Zone Soil	MAAQSATDRRRALELLAGSARQGCTEAFLLAHGFTVDLLADMIRAGVATAQIERARAGGQTRVHITDAGRRALSTRRTQ*
Ga0137378_115819711	3300012210	Vadose Zone Soil	MAAQSATHQRRALELLAVSGRQGCTEAFLLAHGFTFDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALMGKRDAEY*
Ga0137377_107165041	3300012211	Vadose Zone Soil	ATDRRRALELLAGSARQGCTEAFLLAHGFTVDLLADMVRAGLATEQIERVRAGGQSIEVTLVHITEANAGNCNRADP*
Ga0137372_101518521	3300012350	Vadose Zone Soil	MAAQSATDQRRALELLAGSAKQGCTEAFLLAHGFTVELLADMVRAGLATAQIERAYFGGQTRVHITDAGRRALRTKRTQ*
Ga0137367_103068192	3300012353	Vadose Zone Soil	MAAQSATDQRRALELLAGSAKHGCTEAFLLAHGFTAELLADMVRAGLATAQIERAYFGGQTRVHITDAGRRALRGKRTQ*
Ga0137384_111977092	3300012357	Vadose Zone Soil	MAAQSATDQRRALELLAGSAKQGCTEAFLLAHGFTVELLADMVRAGLATAQIERAHFGGQTRVHISDAGRRALRTKRTQ*
Ga0137385_100589842	3300012359	Vadose Zone Soil	MAAQSATDRRRALELLAGSAKRGCTEAFLLAHGFTVELLADMVRAGLATAQIERAYFGGQTRVHITDAGRRALRTKRTQ*
Ga0137385_105577942	3300012359	Vadose Zone Soil	MAAQSATDQRRALKLLAGSAKQGCTEAFLLAHGFTVELPADMVRAGLATAQIERAYFGGQTRVHITDAGRRALADKPKL*
Ga0137373_109565941	3300012532	Vadose Zone Soil	MAAQSATDQRRALELLAGSAKQGCTEAFLLAHGFTVELLADMIRAGVATAQIERARAGGQTRVHITDAGRRALS
Ga0137358_103491322	3300012582	Vadose Zone Soil	MAAQQSDTDRRRALELLAGGAKQGCTEAFLLAHGFTVKLLAEMVRAGLATAQIEAARAGSQTRVHITDAGRRALSPGRAK*
Ga0137358_103539214	3300012582	Vadose Zone Soil	MAVQSAIHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHINDAGRRALRGKRDAE*
Ga0137395_105370111	3300012917	Vadose Zone Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAEY*
Ga0137407_123132832	3300012930	Vadose Zone Soil	MVAQQSDTDRRRALELLAGGAKHGCTEAFLLAHGFTVELLAKMVQAGLATAQIERARLSGQTRMHITDAGRRALRDTRA*
Ga0164302_104269153	3300012961	Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRGALRDKRDAE*
Ga0164309_101314841	3300012984	Soil	MAAQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAEY*
Ga0164304_111390231	3300012986	Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVGAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE*
Ga0164306_103995633	3300012988	Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY*
Ga0132257_1034986921	3300015373	Arabidopsis Rhizosphere	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFALDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAG*
Ga0182036_113705571	3300016270	Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKR
Ga0182041_106592472	3300016294	Soil	MPVQSAVHQRRALELLVASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0182034_104125411	3300016371	Soil	GRRVLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQIERVRAGGQPIEVTRVHITDAGQRALKGKRTQ
Ga0182039_116821211	3300016422	Soil	MPVQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAE
Ga0066667_111322931	3300018433	Grasslands Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTFDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0066669_103773771	3300018482	Grasslands Soil	ELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0210403_107841553	3300020580	Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQNRLHITEAGRRALRGKRDAE
Ga0210408_101953203	3300021178	Soil	MAVQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRFHITDAGRRALRGKRDAE
Ga0210408_102371405	3300021178	Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERRGQTRLHITDAGRRALRG
Ga0210410_104501922	3300021479	Soil	MAVQSATHQRRALELLAVSGKQGCTGAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAE
Ga0126371_105021673	3300021560	Tropical Forest Soil	MATPSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGRQTRLHITEAGRRALRG
Ga0126371_106475431	3300021560	Tropical Forest Soil	DGRRVLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFAAAQSERVRAGGQPIDVTRVHITDVGRRALKAKRTQ
Ga0126371_112422261	3300021560	Tropical Forest Soil	GRRVLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKRTQ
Ga0207653_100425933	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LSGNSLMAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLAAAQIERARAGGQTRLHITEAGRRALRGKRDAG
Ga0207684_103220471	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLAAAQIERARAGGQTRLHITEAGRRALRGKRDAG
Ga0207684_103992602	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0207646_113465521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAE
Ga0207700_109075221	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLAAAQIERARAGGQTRLHITEAG
Ga0207690_114165611	3300025932	Corn Rhizosphere	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0207665_101710991	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLLFSLSGNSLMAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0209240_10384831	3300026304	Grasslands Soil	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0209647_11417401	3300026319	Grasslands Soil	MAAQSATHQRRALELLAVSAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAG
Ga0209159_12305841	3300026343	Soil	RRALELLAVSGRQGCTEAFLLAHGFTFDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0257156_11224664	3300026498	Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRR
Ga0257168_10626262	3300026514	Soil	THQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERRGQTRLHITDAGRRALRGKRDAEY
Ga0209577_106084681	3300026552	Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTFDLLTDMVQAGLATAQIERARAGGQTRLHITDAGRR
Ga0209729_10402141	3300027061	Forest Soil	MAAQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAE
Ga0209590_104777912	3300027882	Vadose Zone Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0209488_100983402	3300027903	Vadose Zone Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDQLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAG
Ga0209526_100306732	3300028047	Forest Soil	MAAQSATHQRRALELLAGSGKQGCTEAFLRAHGFTLDLLTDMVRAGLATAQIEPARAGGQTRLHITDAGRRALRGKRDAE
Ga0209526_104411731	3300028047	Forest Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0209526_109107352	3300028047	Forest Soil	MAVQSATHQRRALELLAVSGKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE
Ga0307278_104012131	3300028878	Soil	QAPLMVTNRRRALELLAGSAKQGCTEAFLLAHGFTVELLGEMVRAGLATARIERARAGGQTRVHITDAGRQALRDKRTSDSDS
Ga0318516_100454261	3300031543	Soil	VLELLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQSERVRAGGQPIDVTRVHITDAGRRALKGKRTQ
Ga0318516_100529363	3300031543	Soil	MPVQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0318541_106467071	3300031545	Soil	MAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0318541_108217232	3300031545	Soil	LELLIGSARQGCTEAFLLAHGFTVELLVNIVRVGFATTQSERVRAGGQPIEVTRVHITDAGRRALRGKRDAE
Ga0318515_105659891	3300031572	Soil	RLSSQSGHSLMAAQSAIHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0318542_105163912	3300031668	Soil	VLELLIGSARQGCTEAFLLAHGFTVELLVNIVRVGFATTQSERVRAGGQPIEVTRVHITDAGRRALRGKRDAE
Ga0307475_109586731	3300031754	Hardwood Forest Soil	MAVQSATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQNERFGQTRLHITDAGRRALRGKRDAE
Ga0318568_110592621	3300031819	Soil	MAAQSATHQRRALKLLAVSAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0306923_122955841	3300031910	Soil	LMAVQSATHQRRALELLAVSGRQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRRSGVSGMQSKRKAPV
Ga0310912_100883374	3300031941	Soil	MPVQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVQAGLATAQNERFGQTRLHITDAGRRALRGKRDAE
Ga0310912_101575342	3300031941	Soil	MAVQSATHQRRALELLAVSSKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0310910_100820606	3300031946	Soil	VQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0310910_102069231	3300031946	Soil	RVLKLLVGSARQGCTEAFLLAHGFTVDLLADMVRAGFATAQIERVRAGGQPIEVTRVHITDVGRRALKGKRTQ
Ga0310911_104107541	3300032035	Soil	MPVQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAEY
Ga0318506_100771532	3300032052	Soil	RSCGVRLFSLSGNSLMPVQSAVHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERHGQTRLHITDAGRRALRGKRDAEY
Ga0307471_1026252671	3300032180	Hardwood Forest Soil	MAVQSAIHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITEAGRRALRGKRDAE
Ga0307472_1025269821	3300032205	Hardwood Forest Soil	MATHQRRALELLAASAKQGCTEAFLLAHGFTLDLLTDMVRAGLATAQIERARAGGQTRLHITDAGRRALRGKRDAE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070491

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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