Metagenome / Metatranscriptome Family F070530

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	131 residues
Representative Sequence	VTELKRSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR
Number of Associated Samples	108
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	26.83 %
% of genes near scaffold ends (potentially truncated)	49.59 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.724 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.642 % of family members)
Environment Ontology (ENVO)	Unclassified (18.699 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.789 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.70% β-sheet: 30.06% Coil/Unstructured: 47.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.113.1.0: automated matches	d3hhja_	3hhj	0.80664
d.113.1.0: automated matches	d3eesa_	3ees	0.7884
d.113.1.2: IPP isomerase-like	d2fkba1	2fkb	0.78008
d.113.1.2: IPP isomerase-like	d1hzta1	1hzt	0.77478
d.113.1.0: automated matches	d3shda_	3shd	0.771

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03023	MurJ	22.76
PF03721	UDPG_MGDP_dh_N	20.33
PF14667	Polysacc_synt_C	5.69
PF13437	HlyD_3	0.81
PF00984	UDPG_MGDP_dh	0.81
PF00211	Guanylate_cyc	0.81
PF13533	Biotin_lipoyl_2	0.81
PF12680	SnoaL_2	0.81
PF01041	DegT_DnrJ_EryC1	0.81
PF01862	PvlArgDC	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	22.76
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	22.76
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	22.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	21.14
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	21.14
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	20.33
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	20.33
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	20.33
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.81
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.81
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.81
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.81
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.81
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.81
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
All Organisms	root	All Organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
cellular organisms	root	All Organisms → cellular organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.46 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.77 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.95 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.07 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.81 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.25 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	5.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.63 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.81 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	5.69 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.81 %
Sphingopyxis indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis indica	0.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	5.69 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.81 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.81 %
Sphingopyxis indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis indica	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	5.69 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.81 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.81 %
Sphingopyxis indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis indica	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	5.69 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.81 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.81 %
Sphingopyxis indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis indica	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100000258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26351	Open in IMG/M
3300003505\|JGIcombinedJ51221_10136500	Not Available	987	Open in IMG/M
3300005347\|Ga0070668_102061533	Not Available	526	Open in IMG/M
3300005434\|Ga0070709_11747498	Not Available	508	Open in IMG/M
3300005435\|Ga0070714_100364109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1360	Open in IMG/M
3300005457\|Ga0070662_101352334	Not Available	613	Open in IMG/M
3300005546\|Ga0070696_100844613	Not Available	756	Open in IMG/M
3300005547\|Ga0070693_101278479	Not Available	566	Open in IMG/M
3300005602\|Ga0070762_10594827	Not Available	734	Open in IMG/M
3300005764\|Ga0066903_101739951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1188	Open in IMG/M
3300006028\|Ga0070717_10530013	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300006041\|Ga0075023_100194725	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006050\|Ga0075028_100139350	Not Available	1272	Open in IMG/M
3300006052\|Ga0075029_100463981	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300006059\|Ga0075017_100706506	Not Available	775	Open in IMG/M
3300006086\|Ga0075019_10062730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	2104	Open in IMG/M
3300006172\|Ga0075018_10078892	Not Available	1426	Open in IMG/M
3300009098\|Ga0105245_13176471	Not Available	509	Open in IMG/M
3300009156\|Ga0111538_12777693	Not Available	613	Open in IMG/M
3300009176\|Ga0105242_11103516	Not Available	807	Open in IMG/M
3300009521\|Ga0116222_1362078	Not Available	629	Open in IMG/M
3300009522\|Ga0116218_1042827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2047	Open in IMG/M
3300009523\|Ga0116221_1397578	Not Available	599	Open in IMG/M
3300009683\|Ga0116224_10109739	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300009698\|Ga0116216_10509901	Not Available	727	Open in IMG/M
3300009700\|Ga0116217_10201361	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300009824\|Ga0116219_10438988	Not Available	726	Open in IMG/M
3300010366\|Ga0126379_10756204	Not Available	1069	Open in IMG/M
3300010371\|Ga0134125_10472508	Not Available	1390	Open in IMG/M
3300010371\|Ga0134125_12537462	Not Available	557	Open in IMG/M
3300010376\|Ga0126381_100962615	Not Available	1230	Open in IMG/M
3300010396\|Ga0134126_10494346	Not Available	1411	Open in IMG/M
3300010398\|Ga0126383_10631663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300010398\|Ga0126383_11525042	Not Available	758	Open in IMG/M
3300012180\|Ga0153974_1011739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1855	Open in IMG/M
3300012986\|Ga0164304_11378967	Not Available	578	Open in IMG/M
3300012989\|Ga0164305_11020715	Not Available	704	Open in IMG/M
3300013306\|Ga0163162_13384834	Not Available	509	Open in IMG/M
3300014325\|Ga0163163_12102680	Not Available	624	Open in IMG/M
3300016294\|Ga0182041_10247620	Not Available	1449	Open in IMG/M
3300016341\|Ga0182035_10518125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300016357\|Ga0182032_11812809	Not Available	533	Open in IMG/M
3300016404\|Ga0182037_10052314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2735	Open in IMG/M
3300016422\|Ga0182039_10229661	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300016422\|Ga0182039_12249156	Not Available	503	Open in IMG/M
3300017821\|Ga0187812_1216514	Not Available	611	Open in IMG/M
3300017822\|Ga0187802_10048133	Not Available	1554	Open in IMG/M
3300017822\|Ga0187802_10234802	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300017943\|Ga0187819_10052526	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	2420	Open in IMG/M
3300017947\|Ga0187785_10702894	Not Available	531	Open in IMG/M
3300017955\|Ga0187817_10226525	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300017970\|Ga0187783_10257170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300017970\|Ga0187783_10371703	Not Available	1040	Open in IMG/M
3300017972\|Ga0187781_10000397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30930	Open in IMG/M
3300017972\|Ga0187781_10020823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4571	Open in IMG/M
3300017975\|Ga0187782_10209605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1459	Open in IMG/M
3300017995\|Ga0187816_10232389	Not Available	803	Open in IMG/M
3300018006\|Ga0187804_10125869	Not Available	1067	Open in IMG/M
3300018007\|Ga0187805_10034239	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300018058\|Ga0187766_10930380	Not Available	615	Open in IMG/M
3300018060\|Ga0187765_10223095	Not Available	1099	Open in IMG/M
3300018062\|Ga0187784_10106014	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300020579\|Ga0210407_10176668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1654	Open in IMG/M
3300020583\|Ga0210401_10012630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8219	Open in IMG/M
3300020583\|Ga0210401_10191871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1900	Open in IMG/M
3300020583\|Ga0210401_10410270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	1217	Open in IMG/M
3300021168\|Ga0210406_10136995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	2060	Open in IMG/M
3300021170\|Ga0210400_10396113	Not Available	1139	Open in IMG/M
3300021171\|Ga0210405_11244350	Not Available	549	Open in IMG/M
3300021171\|Ga0210405_11406731	Not Available	508	Open in IMG/M
3300021402\|Ga0210385_10112322	Not Available	1914	Open in IMG/M
3300021402\|Ga0210385_10232494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1350	Open in IMG/M
3300021403\|Ga0210397_10575407	Not Available	859	Open in IMG/M
3300021404\|Ga0210389_10628955	Not Available	843	Open in IMG/M
3300021404\|Ga0210389_11433909	Not Available	526	Open in IMG/M
3300021405\|Ga0210387_10129636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	2139	Open in IMG/M
3300021405\|Ga0210387_10139276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	2067	Open in IMG/M
3300021406\|Ga0210386_10009063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7863	Open in IMG/M
3300021407\|Ga0210383_10317247	Not Available	1342	Open in IMG/M
3300021407\|Ga0210383_10376044	Not Available	1225	Open in IMG/M
3300021432\|Ga0210384_10221599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1702	Open in IMG/M
3300021478\|Ga0210402_11405065	Not Available	625	Open in IMG/M
3300021479\|Ga0210410_10014232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6853	Open in IMG/M
3300021559\|Ga0210409_10575312	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300021559\|Ga0210409_11068774	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300021560\|Ga0126371_11408726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300025906\|Ga0207699_11408635	Not Available	516	Open in IMG/M
3300025932\|Ga0207690_11121558	Not Available	656	Open in IMG/M
3300025934\|Ga0207686_10923986	Not Available	705	Open in IMG/M
3300025939\|Ga0207665_10929308	Not Available	691	Open in IMG/M
3300025972\|Ga0207668_11716359	Not Available	567	Open in IMG/M
3300027065\|Ga0208489_1004743	Not Available	754	Open in IMG/M
3300027604\|Ga0208324_1024002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1866	Open in IMG/M
3300027696\|Ga0208696_1162561	Not Available	719	Open in IMG/M
3300027889\|Ga0209380_10453560	Not Available	750	Open in IMG/M
3300027895\|Ga0209624_10078626	Not Available	2134	Open in IMG/M
3300027898\|Ga0209067_10290407	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300027908\|Ga0209006_10001466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21409	Open in IMG/M
3300028906\|Ga0308309_11769803	Not Available	523	Open in IMG/M
3300029636\|Ga0222749_10396559	Not Available	731	Open in IMG/M
3300031640\|Ga0318555_10774319	Not Available	518	Open in IMG/M
3300031708\|Ga0310686_118206644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2364	Open in IMG/M
3300031744\|Ga0306918_10142700	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300031754\|Ga0307475_10095913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2308	Open in IMG/M
3300031771\|Ga0318546_10902881	Not Available	622	Open in IMG/M
3300031793\|Ga0318548_10301110	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300031879\|Ga0306919_10658924	Not Available	807	Open in IMG/M
3300031890\|Ga0306925_10383015	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300031896\|Ga0318551_10430982	Not Available	752	Open in IMG/M
3300031910\|Ga0306923_11220502	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300031941\|Ga0310912_10919554	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300031942\|Ga0310916_10280447	Not Available	1409	Open in IMG/M
3300031945\|Ga0310913_10651718	Not Available	746	Open in IMG/M
3300031962\|Ga0307479_11044866	Not Available	785	Open in IMG/M
3300032001\|Ga0306922_12383200	Not Available	506	Open in IMG/M
3300032059\|Ga0318533_10451399	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300032089\|Ga0318525_10518661	Not Available	610	Open in IMG/M
3300032160\|Ga0311301_11358122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis indica	891	Open in IMG/M
3300032205\|Ga0307472_102434691	Not Available	531	Open in IMG/M
3300032261\|Ga0306920_100949831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1254	Open in IMG/M
3300032261\|Ga0306920_103476520	Not Available	583	Open in IMG/M
3300032896\|Ga0335075_10747838	Not Available	928	Open in IMG/M
3300033289\|Ga0310914_10502660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.06%
Host-Associated	Host-Associated	8.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.86%
Aquatic	Environmental → Aquatic	12.20%
Plants	Host-Associated → Plants	8.13%
Fungi	Host-Associated → Fungi	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.86%
Freshwater	Environmental → Aquatic → Freshwater	6.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.50%
Sediment	Environmental → Aquatic → Sediment	5.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%
Roots	Host-Associated → Plants → Roots	0.81%
Mycelium	Host-Associated → Fungi → Mycelium	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.72%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_10000025811	3300002245	Forest Soil	MAALKRSSKLLIYDPRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVQRQVREKLDLATAADDWSVAGTVDNPANNEINXIWTFGRPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN*
JGIcombinedJ51221_101365001	3300003505	Forest Soil	EVDSARRRSVIDVTELKRSSKLLIYDSRHYLYCAYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR*
Ga0070668_1020615331	3300005347	Switchgrass Rhizosphere	PDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0070709_117474981	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0070714_1003641092	3300005435	Agricultural Soil	MTKPKRSSKLLIYDSRRYLYCVYRAPGDWSSPNTISLVGTDGDALAGVLQQVRAKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLNPSALTLFDAMLSPALRSIMRAMPDLFEDR*
Ga0070662_1013523341	3300005457	Corn Rhizosphere	VIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0070696_1008446131	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GVIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0070693_1012784791	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	SKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0070762_105948271	3300005602	Soil	VTELKRSSKLLIYDTRHYLYCVYRAPGEWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPADHEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRATPHLFEDR*
Ga0066903_1017399512	3300005764	Tropical Forest Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGRGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDGLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW*
Ga0070717_105300131	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMEPKRSSKLLIYDSRRYLYCVYRAPGDWSSPNTISLVGTDGDALAGVLQQVREKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLNPSALTLFDTMLSPA
Ga0075023_1001947252	3300006041	Watersheds	HYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANKEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0075028_1001393502	3300006050	Watersheds	VTELKPSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQIREKFHLGTEASDWSVTGKVENPANNDTIWTFGRPIDSLVFVPAAYGGLLCL*
Ga0075029_1004639812	3300006052	Watersheds	VTELKRSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPVESLVFVPAAYGGLLCLKSSTLWLFDKMLS
Ga0075017_1007065061	3300006059	Watersheds	VTELKPSSKLLIYDSRHYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLLFLPAAYGGLLCLKPSTLRLFDKMLSPVRSLGHAGIAAFV*
Ga0075019_100627302	3300006086	Watersheds	VTELKPSSKLLIYDSRHYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQIREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0075018_100788922	3300006172	Watersheds	VTELKRSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQIREKFHLGTEASDWSVTGKVENPANNDTIWTFGRPIDSLVFVPAAYGGLLCL
Ga0105245_131764711	3300009098	Miscanthus Rhizosphere	RRRGVIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0111538_127776932	3300009156	Populus Rhizosphere	VIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMP
Ga0105242_111035162	3300009176	Miscanthus Rhizosphere	MYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0116222_13620781	3300009521	Peatlands Soil	LDDRLDNRLDDRLDDLLMTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLATEANDWSVLGTVPNPANDEINTIWKFAWPIDSLLFSPAAYGGLLCVRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ*
Ga0116218_10428272	3300009522	Peatlands Soil	LDDRLDDLLMTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLATEANDWSVLGTVPNPANDEINTIWKFAWPIDSLLFSPAAYGGLLCVRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ*
Ga0116221_13975782	3300009523	Peatlands Soil	APGEWSNPNTFSLIGTDGDTLYGVLREAREKFHLGTEVSDWSVTGKVENPADNEINTIWTFDRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0116224_101097392	3300009683	Peatlands Soil	VTELKRSSKLLIYDSRHYLYCVYRAPGEWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWLVAGKVENPANNEINTIWTFGRRIDSLDFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0116216_105099011	3300009698	Peatlands Soil	KLLIYDSRHYLYCVYRAPGEWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPADNEINTIWTFGRPIDSLVFVPAAYGGLPFLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0116217_102013612	3300009700	Peatlands Soil	VTELKRSSKLLIYDSRHYLYCVYRAPGEWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPADNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR*
Ga0116219_104389882	3300009824	Peatlands Soil	LDDRLDDLLMTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLATEANDWSVLGTVPNPADNEINTIWKFARRIDSLLFSPAAYGGLLCVKPSALR
Ga0126379_107562042	3300010366	Tropical Forest Soil	MSQSKRSSKLLIYDSRRYLYCVYRAPGDWTNPNTFSLIGTDGDTLDDVLQKVSEKLYLATEVSDWSVAGKAENPDNNEINTIWTFGRPIDNLISLPTAYGGLLCLKPSTLWLFEPMLSPAAISIMRAIPHLFQKR*
Ga0134125_104725082	3300010371	Terrestrial Soil	VIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAM
Ga0134125_125374622	3300010371	Terrestrial Soil	MTKPKRSSKLLIYDSRRYLYCVYRAPGDWSSPNTISLVGTDGDALAGVLQQVREKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLKPSALTLFDTMLSPALRSLMRAMPDLFEDR*
Ga0126381_1009626152	3300010376	Tropical Forest Soil	MSQSKRSSKRLIYDSRRYLYCVYRAPGDWTNPNTFSLIGTDGDTLDDVLQKVSEKLHLATEASDWSVAGKVENPANNEINTIWTFGRPIDNLISLPTAYGGLLCLKPSTLWLFEPMLSPAAISIMRAIPHLFQKR*
Ga0134126_104943461	3300010396	Terrestrial Soil	VIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVVVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR*
Ga0126383_106316632	3300010398	Tropical Forest Soil	VIDVAEFKRSSKLLIYDSRHYLYCVYRGPGDWTNPNTISLIGADGDTLDGVLRRVREKFNLVTETGDWSVTGKAENPADNEINTIWTFGIPIDSLIFLPSAYGGLLCLKPSTLWLFERMLSPAVISIMRAIPHLFEERRGGAVRSSSARYF*
Ga0126383_115250422	3300010398	Tropical Forest Soil	MSQSKRSSKLLIYDSRRYLYCVYRAPGDWTNPNTFSLIGTDGDILDDVLQKVSEKLHLATEASDWSVAGKAENPDNNEINTIWTFGRPIDNLISLPTAYGGLLCLKPSTLWLFEPMLSPAAISIMRAIPHLFEKR*
Ga0153974_10117391	3300012180	Attine Ant Fungus Gardens	VIDVTALKRSSKLLIYDSRRYLYCVYRGQGDWTNPNTVSLIGTDGDALDGVLRQVHEKFCLATEAGDWSVAGRVENPANNEINTIWTFGRPIDSLNFLPAAYGGLLCLKPSALRL
Ga0164304_113789671	3300012986	Soil	VTAMTEPKRSSKLLIYDSRRHLYCVYRAPGDWSSPNTISLVGTDGDALAGVLQQVREKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLNPSALTLFDAMLSPALRSIMRAMPDLFEDR*
Ga0164305_110207152	3300012989	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTLSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSIMRAMPHLFEDR*
Ga0163162_133848341	3300013306	Switchgrass Rhizosphere	VIGVPDLRRSSKLLIYDSRRCLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLV
Ga0163163_121026801	3300014325	Switchgrass Rhizosphere	RGPGDWSSPNTISLVGTDGDALAGVLQQVREKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLNPSALTLFDAMLSPALRSIMRAMPDLFEDR*
Ga0182041_102476202	3300016294	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVEDPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW
Ga0182035_105181251	3300016341	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQ
Ga0182032_118128091	3300016357	Soil	CVYRGRGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW
Ga0182037_100523141	3300016404	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTNGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGRLWLKPSPLLQRRQ
Ga0182039_102296612	3300016422	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW
Ga0182039_122491561	3300016422	Soil	MTELKRSSKLLIYDSRHCLYCVYRAPGDWSNPNTISLIGADGDTLDGVLRQAHEKFRLVSEAGDWSVAGKVENPANNEINTVWTYARPVDSLLFVPAVYGGLFCLEPSALWLFQQMLSPAVLSIMR
Ga0187812_12165142	3300017821	Freshwater Sediment	YCVYRAPGAWTNANSLSFVGADGATIDGVLRQVREKFRLDTEANDWAVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCGKPSALRLFDKMLSPALLSVMRAMPHLFEDR
Ga0187802_100481332	3300017822	Freshwater Sediment	VTELKRSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR
Ga0187802_102348021	3300017822	Freshwater Sediment	QYLYCVYRAPGAWTNANSLSFVGVDGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCIRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ
Ga0187819_100525262	3300017943	Freshwater Sediment	LDDRLDDRLDDLLDDLLMTNAKRSSKLLIFDSRQYLYCGYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCVKPSALRLFDKMLSPALLSVMRAMPHLFEDR
Ga0187785_107028941	3300017947	Tropical Peatland	MTEPKRSSKLLIYDSRRHLYCVYRAPGDWSSPNTISLIGTDGDALAGVLHEVREKVGLATGATDWSATGTVENPTNNEINAIWTLRRPVDCLVFLPAAY
Ga0187817_102265252	3300017955	Freshwater Sediment	MTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGVDGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFAWPIDSLLFSPAAYGGLLCVRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ
Ga0187783_102571702	3300017970	Tropical Peatland	VSDVTELKQSSKLLIYDSRRCLYCVYRGSGNWTNPNTVSLIGTDGGTIDGVLQQVRKKFRLATEASDWSVLGTVENPVNKEINTIWRFRPAVDSLVFLPAAYGGLLCLEPSALRLFDTMLSPALLSVMRAMPHLFEER
Ga0187783_103717031	3300017970	Tropical Peatland	MVEPKRSSKLLIYDSRHYLYCVYRGPGDWGEPNTISLIGTDGDTRDGVLQQVREKFRFSTDAGDWSAAGTVENPANDEINTVWTFGRPIDSLVFVPAAYGGLLCLKPSALRRFDPMLSPALLSVMRAMPHLFEDH
Ga0187781_1000039727	3300017972	Tropical Peatland	VIDVTALKRSSKLLIYDSRRYLYCVYRAPGGWANPNTISLIGTDGDTLDGVLRQAHEKFHLASETGDWSVVGKVENPANNEINTVWTFARPVDSLVFVPAAYGGLLCLKPSALWLFDKMLSPAAVSVMRAMPHLFEDR
Ga0187781_100208234	3300017972	Tropical Peatland	MAGPKRSSKLLIYDSRHYLYCVYRGPGDWSEPNTISLPGTDGDTRDGVLQQVREKFRFSTDAGDWSAAGTVENPANDEINTVWTFGRAIDSLVFVPAAYGGLLCLKPSALRRFDPMLSPALLSVMRAMPHLFEDH
Ga0187782_102096051	3300017975	Tropical Peatland	MAGPKRSSKLLIYDSRHYLYCVYRGPGDWSEPNTISLPGTDGDTCDGVLQQVREKFRFSTDAGDWSAAGTVENPANDEINTVWTFGRAIDSLVFVPAAYGGLLCLKPSTLRRFDPMLSPALLSVMRAMPHLFEDH
Ga0187816_102323891	3300017995	Freshwater Sediment	MTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCVKPSALRLFDKMLSPALLSVMRAMPHLFEDR
Ga0187804_101258691	3300018006	Freshwater Sediment	MTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCVKPSALRPFDKMLSPALLSVMRAMPHLFEDR
Ga0187805_100342392	3300018007	Freshwater Sediment	LDDRLDDLLDDLLMTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLDTEANDWSVLGTVPNPADNEINTIWKFARPIDSLLFSPAAYGGLLCVKPSALRLFDKMLSPALLSVMRAMPHLFEDR
Ga0187766_109303801	3300018058	Tropical Peatland	MTEPKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTISLIGADGDTLDGVLRQAREKFRLASEAGDWSVAGKVENPANNEINTVWTYARPVDSLVFMPTVYGGLLCLKPSGLRVFQQMLSPAVLSIMRAMPHLFEER
Ga0187765_102230952	3300018060	Tropical Peatland	MAGPKRSSKLLIHDSRQYLYCVYRADGDWSHPNTISLPSTDGDTLEGVLRQVREKFRLATDTSDWSAAGQVENPTGDEINTIWTLRRPIEGLLFVPAVYGGVLCLKPSMLRRFDTTLSPALRSVMRALPGAFEDR
Ga0187784_101060142	3300018062	Tropical Peatland	MAEPKRSSKLLIYDSRHYLYCVYRGPGDWSEPNTISLPGTDGDTRDGVLQQVREKFRFSTDAGDWSAAGTVENPANDEINTVWTFGRAIDSLVFVPAAYGGLLCLKPSALRRFDPMLSPALLSVMRAMPHLFEDH
Ga0210407_101766681	3300020579	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210401_100126308	3300020583	Soil	VIDVTELKRSSKLLMYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210401_101918712	3300020583	Soil	MTASKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPANNEINTIWTFGCPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPRN
Ga0210401_104102701	3300020583	Soil	VHAPAGRREAEHSSRGRSVIDVAEPKRSSKLLIYDSRHYLYCVYRGPGGWTNPNTISLIGADGDTLDGVWRRLREKFNLVTEAGDWSVIGKVENPANNEINTIWTFGRRIDSLLFLPAAYGGLLCLKPSALRLFEPILSPAALSVMRAIPHLFDDR
Ga0210406_101369951	3300021168	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKM
Ga0210400_103961131	3300021170	Soil	LHSRPQRREVERSARRRSVIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTHGDTLDGVLRQVREKFQLATQAGDWSVIGKVENPTDSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKMLSPAALSVMRAMPHLFEDR
Ga0210405_112443501	3300021171	Soil	YCGYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210405_114067311	3300021171	Soil	MTALKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPANNEINTIWTFGCPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN
Ga0210385_101123222	3300021402	Soil	MTALKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPANNEINTIWTFGCPLDHLTFRPAAYGGLLCLKPSTLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPRN
Ga0210385_102324942	3300021402	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTFDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210397_105754071	3300021403	Soil	RREVDSARRRSVIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210389_106289551	3300021404	Soil	MTASKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPAINEINTIWTFGRPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN
Ga0210389_114339092	3300021404	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLCGK
Ga0210387_101296361	3300021405	Soil	MAGPKRSSKLLIHDSRQYLYCVYRADGDWSHPNTISLPGTDGDTLEGVLRQVREKFRLATDTSDWSAAGQVENPTRDEINTIWTHRRPIESLLFVPAVYGGVLCLKPSMLRRFDTMLSPALRSVMRALPGAFEDR
Ga0210387_101392762	3300021405	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKMLSPAALSVMRA
Ga0210386_100090638	3300021406	Soil	MTASKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPANNEINTIWTFGCPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN
Ga0210383_103172472	3300021407	Soil	EVDSARRRSVIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKMLSPAALSVMRAMPHLFEDR
Ga0210383_103760442	3300021407	Soil	MTALKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVRRQVREKLDLATAADDWSVAGTVENPANNEINTIWTFGCPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPRN
Ga0210384_102215992	3300021432	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKMLSPAALSVMRAMPHLFEDR
Ga0210402_114050651	3300021478	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPH
Ga0210410_100142321	3300021479	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLF
Ga0210409_105753122	3300021559	Soil	VIDVTELKRSSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTHGDTLDGVLRQVREKFQLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0210409_110687742	3300021559	Soil	VIDVAEPKRSSKLLIYDSRHYLYCVYRGPGGWTNPNTISLIGADGDTLDGVWRRLREKFNLVTEAGDWSVIGKVENPANNEINTIWTFGRRIDSLLFLPAA
Ga0126371_114087261	3300021560	Tropical Forest Soil	RSSKLLIYDSRRYLYCVYRAPGDWTNPNTFSLIGTDGDTLDDVLQKVSEKLHLATEASDWSVAGKAENPDNNEINTIWTFGRPIDNLISLPTVYGGLLCLKPSTLRQFEPMLSPAAISIMRAIPHLFGKR
Ga0207699_114086351	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR
Ga0207690_111215582	3300025932	Corn Rhizosphere	VPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAY
Ga0207686_109239861	3300025934	Miscanthus Rhizosphere	REAGRSARRRGVIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR
Ga0207665_109293082	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTKPKRSSKLLIYDSRRYLYCVYRAPGDWSSPNTISLVGTDGDALAGVLQQVREKVGLTTEAADWAAAGTVENPANNEINAIWTLRRPVDSIVFLPAAYGGLLCLNPSALTLFDTM
Ga0207668_117163591	3300025972	Switchgrass Rhizosphere	AGRSARRRGVIGVPDLKRWSKLLMYDSRRYLYCVYRGQGDWSNPNTISLIGADGDTLDGVLRQIDEKFRLATEAGDWSVTGKVANPANNEINTVWTCRRPIDSLVFVPAAYNGLLCLKPSALWLFEQMLSPAALSIMRAMPQVFEDR
Ga0208489_10047431	3300027065	Forest Soil	RRSVIDVTELKRSSKLLIYDSRHYLYCAYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALWLFGKMLSPAALSVMRAMPHLFEDR
Ga0208324_10240022	3300027604	Peatlands Soil	MTNAKRSSKLLIFDSRQYLYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLATEANDWSVLGTVPNPANDEINTIWKFAWPIDSLLFSPAAYGGLLCVRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ
Ga0208696_11625612	3300027696	Peatlands Soil	LYCVYRAPGAWTNANSLSFVGADGDTIDGVLRQVREKFRLATEANDWSVLGTVPNPANDEINTIWKFAWPIDSLLFSPAAYGGLLCVRPSAIWLFEAMLSPAALSIMRAMPHLFEDQ
Ga0209380_104535602	3300027889	Soil	VIDVTELKRSSKLLIYDSRHYLYCAYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLEPSALWLFGKMLSPAALSVMRAMPHLFEDR
Ga0209624_100786261	3300027895	Forest Soil	MAALKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVQRQVREKLDLATAADDWSVAGTVDNPANNEINAIWTFGRPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN
Ga0209067_102904072	3300027898	Watersheds	VTELKRSSKLLIYDSRHYLYCVYRGPGDWSNPNTFSLIGTDGDTLDGVLRQIREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRA
Ga0209006_100014669	3300027908	Forest Soil	MAALKRSSKLLIYDPRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVQRQVREKLDLATAADDWSVAGTVDNPANNEINAIWTFGRPLDHLTFRPAAYGGLLCLKPSDLRLFDTMLSPALLSVMRAIPQIFEERADQLSSPGN
Ga0308309_117698032	3300028906	Soil	MAALKRSSKLLIYDPRRYLYCVYRAPGDWSNPNTISLIGTDGDTVDGVQRQVREKLDLATAADDWSVAGTVDNPANNEINAIWTFGRPLDHLTFRPAAYGGLLCLK
Ga0222749_103965591	3300029636	Soil	LLHSPPQRREVDSARRRSVIDVTELKRRSKLLIYDSRHYLYCVYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLATQAGDWSVIGKVENPADSEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSALCLFGKMLSPAALSVMRAMPHLFEDR
Ga0318555_107743191	3300031640	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVDSLVFPPA
Ga0310686_1182066442	3300031708	Soil	VTELKPSSKLLIYDSRHYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSAMRAMPHLFEDR
Ga0306918_101427002	3300031744	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW
Ga0307475_100959132	3300031754	Hardwood Forest Soil	VTELKPSSKLLIYDSRHYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLLFLPAAYGGLLCLKPSTLRLFDKMLSPVRSLGHAGIAAFV
Ga0318546_109028811	3300031771	Soil	VRTPIAFFDAPPRRREVEHSARGRSMIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW
Ga0318548_103011102	3300031793	Soil	MINVAEQKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRETFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVD
Ga0306919_106589242	3300031879	Soil	MIDVAELKRSSKLLIYDSRHYLYSVYRGHGDWTNPHTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW
Ga0306925_103830152	3300031890	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW
Ga0318551_104309822	3300031896	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLF
Ga0306923_112205022	3300031910	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHL
Ga0310912_109195542	3300031941	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDDDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDS
Ga0310916_102804472	3300031942	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVDSLVF
Ga0310913_106517181	3300031945	Soil	MTELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW
Ga0307479_110448661	3300031962	Hardwood Forest Soil	TELKPSSKLLIYDSRHYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLLFLPAAYGGLLCLKPSTLRLFDKMLSPVRSLGHAGIAAFV
Ga0306922_123832002	3300032001	Soil	MTELKRSSKLLIYDSRHCLYCVYRAPGDWSNPNTISLIGADGDTLDGVLRQAHEKFRLVSEAGDWSVAGKVENPANNEINTVWTYARPVDSLLFVPAVYGGLF
Ga0318533_104513991	3300032059	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLETEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW
Ga0318525_105186612	3300032089	Soil	MINVAEQKRSSKLLIYDSRQYLYCVYRGHGDWTNPHTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFE
Ga0311301_113581222	3300032160	Peatlands Soil	VTELKRSSKLLIYDSRHYLYCVYRAPGEWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPADNEINTIWTFGRPIDSLVFVPAAYGGLLCLKPSTLWLFDKMLSPAALSVMRAMPHLFEDR
Ga0307472_1024346911	3300032205	Hardwood Forest Soil	HYLYCIYRAPGDWSNPNTFSLIGTDGDTLDGVLRQVREKFHLGTEASDWSVTGKVENPANNEINTIWTFGRPIDSLLFLPAAYGGLLCLKPSTLRLFDKMLSPVRSLGHAGIAAFV
Ga0306920_1009498312	3300032261	Soil	MIDVAEPKRSSKLLIYDSRHCLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWLVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFEQMLSPAALSVMRAMPHLFEEW
Ga0306920_1034765201	3300032261	Soil	MSQSKRSSKLLLYDTRRYLYCVYRAPGDWTNSNTFSLIGTDGDTLDDVLQKVSEKLHLATEASDWSVAGKVENPTNNEVNTIWTFGRPIDNLISLPTA
Ga0335075_107478382	3300032896	Soil	MMALKRSSKLLIYDSRRYLYCVYRAPGDWSNPNTISLIGTDGDTLEGVRRQVQEKLDLATAAGDWSVAGTVENPANNELNIIWTFGRPLDHLTFRPAAYGGLLCVKPSTLRLFGTMLSPALTSVMQAMPQIFEARAGQLSSPAN
Ga0310914_105026602	3300033289	Soil	MIDVAELKRSSKLLIYDSRHYLYCVYRGHGDWTNPNTFSLIGTDGDTLDGVLRQVRERFRLATEAGDWSVIGKVENPANNEINTIWTFGRPVDSLVFPPAAYGGLLCLKPSTLWQFERMLSPAALSVMRAMPHLFEEW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences