NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F070608

Metagenome Family F070608

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070608
Family Type Metagenome
Number of Sequences 123
Average Sequence Length 57 residues
Representative Sequence TETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Number of Associated Samples 116
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.81 %
% of genes near scaffold ends (potentially truncated) 98.37 %
% of genes from short scaffolds (< 2000 bps) 94.31 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(15.447 % of family members)
Environment Ontology (ENVO) Unclassified
(25.203 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.659 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 41.07%    Coil/Unstructured: 58.93%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01977UbiD 45.53
PF04055Radical_SAM 0.81
PF13488Gly-zipper_Omp 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 45.53

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8904879All Organisms → cellular organisms → Bacteria1043Open in IMG/M
2170459002|FZY7DQ102FXDLZAll Organisms → cellular organisms → Bacteria539Open in IMG/M
2170459005|F1BAP7Q02F67X4All Organisms → cellular organisms → Bacteria522Open in IMG/M
2170459006|GBPF9FW02HBU54All Organisms → cellular organisms → Bacteria547Open in IMG/M
2170459009|GA8DASG02JBPJVAll Organisms → cellular organisms → Bacteria522Open in IMG/M
2170459010|GIO7OMY02G7J5DAll Organisms → cellular organisms → Bacteria514Open in IMG/M
2170459012|GOYVCMS02H3DJ4All Organisms → cellular organisms → Bacteria532Open in IMG/M
2170459014|G1P06HT02HOS4HAll Organisms → cellular organisms → Bacteria566Open in IMG/M
2170459015|G14TP7Y01BKY8KAll Organisms → cellular organisms → Bacteria732Open in IMG/M
2189573003|GZIR7W402G1SK5All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium546Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_104449161All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300000891|JGI10214J12806_12016774All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300000955|JGI1027J12803_108339303All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300000956|JGI10216J12902_108369838All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300002916|JGI25389J43894_1011826All Organisms → cellular organisms → Bacteria1469Open in IMG/M
3300003203|JGI25406J46586_10142769All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300004479|Ga0062595_100943144All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300005160|Ga0066820_1010389All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005171|Ga0066677_10111248All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300005176|Ga0066679_10874029All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005177|Ga0066690_10080200All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2061Open in IMG/M
3300005328|Ga0070676_11053109All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005331|Ga0070670_101612269All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium597Open in IMG/M
3300005337|Ga0070682_101075319All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005340|Ga0070689_100699297All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300005341|Ga0070691_10260191All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300005347|Ga0070668_100220650All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300005347|Ga0070668_102036271All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005354|Ga0070675_101622481All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300005355|Ga0070671_100239713All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300005355|Ga0070671_101568226All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300005439|Ga0070711_100653677All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300005466|Ga0070685_10715682All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005507|Ga0074259_10396358All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005526|Ga0073909_10535884All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium571Open in IMG/M
3300005544|Ga0070686_100166031All Organisms → cellular organisms → Bacteria1558Open in IMG/M
3300005553|Ga0066695_10309043All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300005554|Ga0066661_10037755All Organisms → cellular organisms → Bacteria2707Open in IMG/M
3300005556|Ga0066707_10168076All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1400Open in IMG/M
3300005559|Ga0066700_10254665All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300005575|Ga0066702_10344156All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300005576|Ga0066708_10964688All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005719|Ga0068861_102186801All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005764|Ga0066903_104204477All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300005764|Ga0066903_108418566All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300005844|Ga0068862_102550148All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005985|Ga0081539_10047826All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2439Open in IMG/M
3300006031|Ga0066651_10371035All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300006032|Ga0066696_10967504All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300006046|Ga0066652_100470720All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1161Open in IMG/M
3300006163|Ga0070715_10383053All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300006163|Ga0070715_10961784All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300006175|Ga0070712_100846277All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009012|Ga0066710_101768706All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300009012|Ga0066710_103067117All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300009093|Ga0105240_11621372All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300009094|Ga0111539_11856548All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300009098|Ga0105245_10536531All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300009101|Ga0105247_11158892All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300009137|Ga0066709_101606540All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300009162|Ga0075423_13135030All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300009545|Ga0105237_10960584All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300009553|Ga0105249_12409572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium599Open in IMG/M
3300010043|Ga0126380_10005703All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium5298Open in IMG/M
3300010326|Ga0134065_10350894All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300010336|Ga0134071_10674580All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300010359|Ga0126376_10965501All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300010364|Ga0134066_10053738All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300010398|Ga0126383_12782521All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300010403|Ga0134123_11777987All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300011119|Ga0105246_10760685All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300012198|Ga0137364_10211568All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1423Open in IMG/M
3300012209|Ga0137379_10985330All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300012350|Ga0137372_11199838All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012358|Ga0137368_10200935All Organisms → cellular organisms → Bacteria1417Open in IMG/M
3300012899|Ga0157299_10123664All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300012929|Ga0137404_10132007All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter2056Open in IMG/M
3300012951|Ga0164300_10680671All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012971|Ga0126369_11106181All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300012984|Ga0164309_11124666All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300012988|Ga0164306_10231600All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1314Open in IMG/M
3300013096|Ga0157307_1189781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300014968|Ga0157379_11529252All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300015358|Ga0134089_10461906All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300015371|Ga0132258_10776591All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2414Open in IMG/M
3300015371|Ga0132258_13214535All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1127Open in IMG/M
3300015372|Ga0132256_101078009All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300015373|Ga0132257_103427938All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300016341|Ga0182035_11720492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium567Open in IMG/M
3300016387|Ga0182040_10740396All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300017654|Ga0134069_1042398All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300017657|Ga0134074_1325778All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300017792|Ga0163161_10730273All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300018051|Ga0184620_10205251All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300018066|Ga0184617_1276609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
3300019875|Ga0193701_1063185All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300022756|Ga0222622_10814535All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300025905|Ga0207685_10317239All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300025929|Ga0207664_10245841All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300025961|Ga0207712_11201023All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300026118|Ga0207675_102035274All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300026343|Ga0209159_1192173All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300026528|Ga0209378_1079174All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300026540|Ga0209376_1278750All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300026861|Ga0207503_1005250All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300028784|Ga0307282_10630154All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300028793|Ga0307299_10335023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300028807|Ga0307305_10531979All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium525Open in IMG/M
3300028814|Ga0307302_10667554All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300028824|Ga0307310_10172224All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300028824|Ga0307310_10708418All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300028885|Ga0307304_10473303All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300031446|Ga0170820_16327127All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1106Open in IMG/M
3300031720|Ga0307469_12336115All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031770|Ga0318521_10983527All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300031858|Ga0310892_10267470All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1063Open in IMG/M
3300031879|Ga0306919_10428343All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1017Open in IMG/M
3300031908|Ga0310900_10710057All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300032017|Ga0310899_10230051All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300032035|Ga0310911_10531799All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300032180|Ga0307471_102596327All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300032205|Ga0307472_101297085All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300032261|Ga0306920_100171615All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3233Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.88%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil4.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.06%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.25%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.44%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.63%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.63%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
2170459014Litter degradation PV2EngineeredOpen in IMG/M
2170459015Litter degradation PV4EngineeredOpen in IMG/M
2189573003Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005160Soil and rhizosphere microbial communities from Laval, Canada - mgLMBEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005507Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026861Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICI_032810502088090015SoilMDGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVHPSRGVTFSNGRVVFFRYLTP
E1_090104802170459002Grass SoilETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANDRVVFFRHLPSPPPLGW
E41_049184602170459005Grass SoilTPEQTIPGSGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLPSPPP
L01_061909802170459006Grass SoilGAPEQTIPGSGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLPSPPP
F47_045853402170459009Grass SoilPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLPSPPP
F62_032071702170459010Grass SoilLRYETPPSYGGPYYYGPFDWSYIPPKFVYPSRGVTFANGRVVFFRYLAPQ
N56_009594902170459012Grass SoilRTTETWVYLRYETPPSYGGPYYYGPFDWSYVPPKFVHPSRGVTFRTVRVVVLRYLTPP
2PV_031790502170459014Switchgrass, Maize And Mischanthus LitterGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVFFRHLPSPPPIGY
4PV_014596302170459015Switchgrass, Maize And Mischanthus LitterAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTLSNGSVAYFGYLAPP
FE2_083314302189573003Grass SoilTWVYLRYDTPPSYGGPYSYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLTPP
INPhiseqgaiiFebDRAFT_10444916113300000364SoilLDYETPPSYGGPYYYGPFDWSYIPPRFVHPTKGVTFANGRVVYFQYLGPQ*
JGI10214J12806_1201677413300000891SoilYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVFFRHLPSPPP*
JGI1027J12803_10833930323300000955SoilPDNMGDRPSETWLYLRYQTPPSYGAPYYYGPFDWSYIPPKFPYASKGATFAKGRVVFFQY
JGI10216J12902_10836983823300000956SoilSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPAPPPL*
JGI25389J43894_101182623300002916Grasslands SoilGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
JGI25406J46586_1014276913300003203Tabebuia Heterophylla RhizosphereLRYQTPPSYGGPYYYGPFDWSYIPPKFPYASKGATFSKGKVVFFQYVPPPPPL*
Ga0062595_10094314413300004479SoilRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNGRVAYFGYLPPP*
Ga0066820_101038923300005160SoilGRATETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANDRVAFFRYLAPQ*
Ga0066677_1011124823300005171SoilPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
Ga0066679_1087402913300005176SoilWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVYPTRGVTFSNGRVVFFRSMAPP*
Ga0066690_1008020033300005177SoilSYGGPYYYGPFDWSYIPPKFSYASKGATFSKGRVVFFQYVPPPPPL*
Ga0070676_1105310913300005328Miscanthus RhizospherePAETWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0070670_10161226913300005331Switchgrass RhizosphereGDRATETWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRHLTPP
Ga0070682_10107531923300005337Corn RhizosphereGRPTETWVYLRYQTPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVYFRHLPSPPP*
Ga0070689_10069929723300005340Switchgrass RhizosphereGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVYFRHLPSPPP*
Ga0070691_1026019113300005341Corn, Switchgrass And Miscanthus RhizosphereYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLTPP*
Ga0070668_10022065043300005347Switchgrass RhizosphereRYETPPSYGGPYPYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLAPQ*
Ga0070668_10203627113300005347Switchgrass RhizosphereYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPAPPPL*
Ga0070675_10162248123300005354Miscanthus RhizosphereRGHPAETWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP
Ga0070671_10023971313300005355Switchgrass RhizosphereKPDQKIPNNMGGRATETWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVEFFRYLTPP*
Ga0070671_10156822623300005355Switchgrass RhizosphereYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0070711_10065367713300005439Corn, Switchgrass And Miscanthus RhizosphereRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNAGVAYFGYLAPP*
Ga0070685_1071568213300005466Switchgrass RhizosphereLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0074259_1039635823300005507Arabidopsis RhizosphereTADQKIPANVRGHAAETWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0073909_1053588423300005526Surface SoilTETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLAPQ*
Ga0070686_10016603113300005544Switchgrass RhizosphereYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFTNGRVVFFRYLTPP*
Ga0066695_1030904313300005553SoilNMDGRATETWVYLCYETPPSYGEPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP*
Ga0066661_1003775553300005554SoilPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
Ga0066707_1016807613300005556SoilPDNMGDRPTETWLYLRYQTPPSYGGPYYYGPFDWSYIPPKFSYASKGATFSKGRVVFFQYVPPPPPL*
Ga0066700_1025466513300005559SoilRYDTPFPSYGVPYYYGPFDWSYIPPKFPYPSRGVTFSKGRVVFFRYLPPPPP*
Ga0066702_1034415623300005575SoilGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
Ga0066708_1096468823300005576SoilETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFSTGRVVFFRHLPPPPP*
Ga0068861_10218680123300005719Switchgrass RhizosphereRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0066903_10420447723300005764Tropical Forest SoilRNRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFANGRVAYFGQLAPP
Ga0066903_10841856623300005764Tropical Forest SoilAWGTPEQTIPGSGHGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVYFRHLPSPPP*
Ga0068862_10255014813300005844Switchgrass RhizosphereLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPAPPPL*
Ga0081539_1004782633300005985Tabebuia Heterophylla RhizosphereNRPIETGLYLRYQTPPSYGGPYYYGPFDWSYIPPKFPYASKGATFSKGKVVFFQYVPPPPPL*
Ga0066651_1037103513300006031SoilETWVYLRYETTPSYGGPYYYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP*
Ga0066696_1096750413300006032SoilGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPIGW*
Ga0066652_10047072033300006046SoilTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP*
Ga0070715_1038305313300006163Corn, Switchgrass And Miscanthus RhizosphereRDRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNDGVAYFGYLAPP
Ga0070715_1096178413300006163Corn, Switchgrass And Miscanthus RhizosphereTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGKVVFFRHLPSPPPLGW*
Ga0070712_10084627723300006175Corn, Switchgrass And Miscanthus RhizosphereDRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNGGVAYFGYLPPP*
Ga0066710_10176870613300009012Grasslands SoilPDRKIPGERRGRPTETWMYVRYDTPFPSYGVPYYYGPFDWSYIPPKFPYLSKGVTFSSGRVVFFQYLPPPPP
Ga0066710_10306711713300009012Grasslands SoilKIPGYGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW
Ga0105240_1162137213300009093Corn RhizosphereDQKIPASIRDRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSTGRVAYFGYLPRP*
Ga0111539_1185654813300009094Populus RhizospherePSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRHLTPP*
Ga0105245_1053653113300009098Miscanthus RhizosphereVWLAWGKPDQKIPNNGGGRATWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPLRGVTFANGRVVFFRYLTPP*
Ga0105247_1115889213300009101Switchgrass RhizosphereVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSTGRVAYFGYLPRP*
Ga0066709_10160654033300009137Grasslands SoilMYVRYDTPFPSYGVPYYYGPFDWSYIPPKFPYLSKGVTFSSGRVVFFQYLPPPPP*
Ga0075423_1313503013300009162Populus RhizosphereYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAATFSNVRVAYFGYLPPP*
Ga0105237_1096058433300009545Corn RhizosphereWGKPDQKIPNNIGGRATETWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLAPQ*
Ga0105249_1240957223300009553Switchgrass RhizospherePNNMNGRPSETWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLTPP*
Ga0126380_1000570363300010043Tropical Forest SoilGYGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVYFRHLPSPPP*
Ga0134065_1035089423300010326Grasslands SoilAWGTPEQKIPGPMRNSETWVYVRYDTPFPSYGVPYYYGPFDWSYIPPKFPYPSRGVTFSKGRVVFFRYLPPPPP*
Ga0134071_1067458013300010336Grasslands SoilTETWVYLRYDTPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
Ga0126376_1096550123300010359Tropical Forest SoilLAWGTADQKIPANVRGRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIKAVTFSDGRVAYFGYLPPP*
Ga0134066_1005373823300010364Grasslands SoilPEQKIPGPMRNSETWVYVRYDTPFPSYGVPYYYGPFDWSYIPLKFPYPSRGVTFSKGRVVFFRYLPPPPP*
Ga0126383_1278252113300010398Tropical Forest SoilAWGTADQKIPADVRGRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVYPIRAVTFSDGRVAYFGYLPPP*
Ga0134123_1177798713300010403Terrestrial SoilTETWVYLRYDTPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP*
Ga0105246_1076068533300011119Miscanthus RhizosphereVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0137364_1021156833300012198Vadose Zone SoilCYETPPSYGEPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP*
Ga0137379_1098533023300012209Vadose Zone SoilGYGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPLGW*
Ga0137372_1119983813300012350Vadose Zone SoilETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPAPPPYGW
Ga0137368_1020093513300012358Vadose Zone SoilYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLLAPPPL*
Ga0157299_1012366423300012899SoilNNMGGRATETWVYLRYETPPSYGGPYAYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLTPP*
Ga0137404_1013200713300012929Vadose Zone SoilDQKIPDNMGDRPTETWLYLRYETPPSYGGPYYYGPFDWSYIPPKFPYASKGATFSKDRVVFFQYVPPPPPL*
Ga0164300_1068067113300012951SoilTPPSYGGPYSYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLSPP*
Ga0126369_1110618113300012971Tropical Forest SoilIPGPVQDSETWVYLRYDTPPSYGGPYFYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRNLPPPPP*
Ga0164309_1112466613300012984SoilDQKIPNNMGGHPSETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVYPSRGVTFANGRVVFFRYLTPP*
Ga0164306_1023160033300012988SoilNNMGGHPSETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFAKGRVVFFRYLTPP*
Ga0157307_118978123300013096SoilRYETPPSYGGPYAYGPFDWTYIPPKFVYPLRGVTFANGRVVFFRYLTPP*
Ga0157379_1152925223300014968Switchgrass RhizosphereSYAGPYAYGPFDWTYIPPKFVYPLRGVTFANGRVVFFRYLTPP*
Ga0134089_1046190623300015358Grasslands SoilGNVRGRPTETWVYIRYNTPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFSDGRVVFFRYLPSPPPM*
Ga0132258_1077659113300015371Arabidopsis RhizosphereEQKIPGYGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPAPPPL*
Ga0132258_1321453533300015371Arabidopsis RhizosphereGTADQKIPANVRGHPAETWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP*
Ga0132256_10107800913300015372Arabidopsis RhizosphereSIRDRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAATFSNGRVAYFGYLPPP*
Ga0132257_10342793813300015373Arabidopsis RhizosphereAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIKAVTFSDGRVAYFGYLPPP*
Ga0182035_1172049223300016341SoilRYETPPSYGVPYYYGPFDWSYIPPKFIYPLKAVTFSNSRVAYFGYLAPR
Ga0182040_1074039613300016387SoilDRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNSRVAYFGYLAPP
Ga0134069_104239813300017654Grasslands SoilQKIPGYGHGRPTETWVYLRYDTPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPSPPPFAW
Ga0134074_132577813300017657Grasslands SoilTWVYLRYETPPSYGEPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0163161_1073027333300017792Switchgrass RhizosphereETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLAPQ
Ga0184620_1020525113300018051Groundwater SedimentGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGKVVFFRHLPAPPPL
Ga0184617_127660923300018066Groundwater SedimentLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0193701_106318513300019875SoilPNNMDGRATETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0222622_1081453523300022756Groundwater SedimentLSWGTPDLKIPNNMGGRAETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0207685_1031723923300025905Corn, Switchgrass And Miscanthus RhizosphereIPASVRYRPAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNDRVAYFGYLAPP
Ga0207664_1024584113300025929Agricultural SoilTWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNDGVAYFGYLAPP
Ga0207712_1120102313300025961Switchgrass RhizospherePNNMDGRPSEPWVYLRYETPPSYGGPYPYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLAPQ
Ga0207675_10203527413300026118Switchgrass RhizosphereNVRGHPAETWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP
Ga0209159_119217313300026343SoilPSYGEPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0209378_107917413300026528SoilPDNMGDRPTETWLYLRYQTPPSYGGPYYYGPFDWSYIPPKFSYASKGATFSKGRVVFFQYVPPPPPL
Ga0209376_127875013300026540SoilSYGEPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0207503_100525013300026861SoilETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLPSPPP
Ga0307282_1063015413300028784SoilTPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0307299_1033502323300028793SoilPNNMDGRATETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYVTPP
Ga0307305_1053197923300028807SoilNMDGRPNETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVYPSRGVTFANGRVVFFRYLTPP
Ga0307302_1066755423300028814SoilPPSYGGPYSYGPFDWSYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0307310_1017222423300028824SoilKIPGYGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFADGRVVFFRHLPSPPP
Ga0307310_1070841823300028824SoilAETWVYLRYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0307304_1047330323300028885SoilGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVFFRHLPPPPP
Ga0170820_1632712713300031446Forest SoilNMEGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFVYPSRGVTFANGRVVFFRYLTPP
Ga0307469_1233611523300031720Hardwood Forest SoilTWVYLRYETPPSYGGPYYYGPFDWSNIPPKFIYPIRAVTFSNGRVAYFGKLAPP
Ga0318521_1098352723300031770SoilTWVYLRYETPPSYGVPYYYGPFDWSYIPPKFIYPLKAVTFSNSRVAYFGYLAPR
Ga0310892_1026747013300031858SoilVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP
Ga0306919_1042834333300031879SoilYETPPSYGGPYYYGPFDWSYIPPKFIYPIKAVTFSDGRVAYFGYLPPP
Ga0310900_1071005733300031908SoilWVYLSYETPPSYGGPYSYGPFDWTYIPPKFVHPSRGVTFANGRVVFFRYLTPP
Ga0310899_1023005133300032017SoilWVYLRYETPPSYGGPYYYGPFDWTYIPPKFIYPIRAVTFSDGRVAYFGYLPPP
Ga0310911_1053179923300032035SoilSYGGPYYYGPFDWSYIPPKFIYPIRAVTFSNSRVAYFGYLAPP
Ga0307471_10259632723300032180Hardwood Forest SoilPGSGRGRPTETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFPYPSKGVTFANGRVVYFRHLPAPPPL
Ga0307472_10129708513300032205Hardwood Forest SoilAETWVYLRYETPPSYGGPYYYGPFDWSYIPPKFIYPIRAATFSNGRVAYFGYLAPP
Ga0306920_10017161533300032261SoilMVGRPAETWVYLRYETPPSYGVPYYYGPFDWSYIPPKFIYPLKAVTFSNSRVAYFGYLAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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