Metagenome / Metatranscriptome Family F070671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070671
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	73 residues
Representative Sequence	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Number of Associated Samples	100
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.61 %
% of genes near scaffold ends (potentially truncated)	31.71 %
% of genes from short scaffolds (< 2000 bps)	80.49 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.634 % of family members)
Environment Ontology (ENVO)	Unclassified (44.715 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.911 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.49% β-sheet: 0.00% Coil/Unstructured: 48.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF08241	Methyltransf_11	16.26
PF01968	Hydantoinase_A	6.50
PF11154	DUF2934	4.88
PF13847	Methyltransf_31	2.44
PF00282	Pyridoxal_deC	1.63
PF10058	zinc_ribbon_10	1.63
PF12847	Methyltransf_18	0.81
PF00398	RrnaAD	0.81
PF00497	SBP_bac_3	0.81
PF07637	PSD5	0.81
PF02475	Met_10	0.81
PF03551	PadR	0.81
PF13649	Methyltransf_25	0.81
PF03811	Zn_Tnp_IS1	0.81
PF01839	FG-GAP	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.63
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.81
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.81
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.81
COG2520	tRNA G37 N-methylase Trm5	Translation, ribosomal structure and biogenesis [J]	0.81
COG3677	Transposase InsA	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.89 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.88 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	2.44 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.88 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	2.44 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.88 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	2.44 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.07 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	2.44 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.81 %
Veillonella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.07 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	2.44 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.81 %
Veillonella atypica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella atypica	0.81 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0783825	Not Available	600	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0784080	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1893108	Not Available	522	Open in IMG/M
3300000956\|JGI10216J12902_100356204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2343	Open in IMG/M
3300000956\|JGI10216J12902_109680373	Not Available	617	Open in IMG/M
3300001431\|F14TB_101049644	All Organisms → cellular organisms → Bacteria	4820	Open in IMG/M
3300003999\|Ga0055469_10121848	Not Available	769	Open in IMG/M
3300004114\|Ga0062593_100556532	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300004463\|Ga0063356_100614593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300004479\|Ga0062595_102411234	Not Available	522	Open in IMG/M
3300004798\|Ga0058859_10878788	Not Available	728	Open in IMG/M
3300005093\|Ga0062594_100362560	Not Available	1146	Open in IMG/M
3300005289\|Ga0065704_10646388	Not Available	573	Open in IMG/M
3300005328\|Ga0070676_10004160	All Organisms → cellular organisms → Bacteria → Acidobacteria	7599	Open in IMG/M
3300005331\|Ga0070670_100237910	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005333\|Ga0070677_10046182	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300005335\|Ga0070666_10036758	All Organisms → cellular organisms → Bacteria → Proteobacteria	3252	Open in IMG/M
3300005338\|Ga0068868_102069765	Not Available	541	Open in IMG/M
3300005343\|Ga0070687_100059372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2013	Open in IMG/M
3300005347\|Ga0070668_100022101	All Organisms → cellular organisms → Bacteria	4808	Open in IMG/M
3300005353\|Ga0070669_101223535	Not Available	649	Open in IMG/M
3300005354\|Ga0070675_101896598	Not Available	550	Open in IMG/M
3300005355\|Ga0070671_100261232	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300005356\|Ga0070674_100012175	All Organisms → cellular organisms → Bacteria	5275	Open in IMG/M
3300005356\|Ga0070674_100807511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300005441\|Ga0070700_100768193	Not Available	773	Open in IMG/M
3300005548\|Ga0070665_100534186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300005549\|Ga0070704_100873730	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005564\|Ga0070664_102151483	Not Available	529	Open in IMG/M
3300005578\|Ga0068854_101697288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005719\|Ga0068861_101506554	Not Available	660	Open in IMG/M
3300006844\|Ga0075428_100002674	All Organisms → cellular organisms → Bacteria	19365	Open in IMG/M
3300006844\|Ga0075428_101486541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	710	Open in IMG/M
3300006844\|Ga0075428_102221637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella atypica	566	Open in IMG/M
3300006847\|Ga0075431_100733784	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300006865\|Ga0073934_10016938	All Organisms → cellular organisms → Bacteria	7986	Open in IMG/M
3300006881\|Ga0068865_100346251	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300006894\|Ga0079215_11374800	Not Available	550	Open in IMG/M
3300006969\|Ga0075419_10145141	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300009078\|Ga0105106_11241742	Not Available	529	Open in IMG/M
3300009100\|Ga0075418_10430756	Not Available	1412	Open in IMG/M
3300009147\|Ga0114129_10653959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1356	Open in IMG/M
3300009148\|Ga0105243_12422776	Not Available	563	Open in IMG/M
3300009156\|Ga0111538_10001509	All Organisms → cellular organisms → Bacteria	32549	Open in IMG/M
3300009156\|Ga0111538_13580800	Not Available	538	Open in IMG/M
3300010399\|Ga0134127_12361103	Not Available	611	Open in IMG/M
3300011417\|Ga0137326_1062530	Not Available	821	Open in IMG/M
3300012891\|Ga0157305_10147520	Not Available	630	Open in IMG/M
3300012900\|Ga0157292_10075993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300012909\|Ga0157290_10114022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	818	Open in IMG/M
3300012943\|Ga0164241_10776313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300013297\|Ga0157378_12700690	Not Available	549	Open in IMG/M
3300013306\|Ga0163162_10557951	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300013308\|Ga0157375_11788068	Not Available	728	Open in IMG/M
3300014255\|Ga0075320_1056065	Not Available	717	Open in IMG/M
3300014745\|Ga0157377_10185354	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300014745\|Ga0157377_10614948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300015258\|Ga0180093_1101242	Not Available	707	Open in IMG/M
3300015371\|Ga0132258_10397775	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300018083\|Ga0184628_10031915	All Organisms → cellular organisms → Bacteria	2630	Open in IMG/M
3300018083\|Ga0184628_10069861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1784	Open in IMG/M
3300018422\|Ga0190265_10406983	All Organisms → cellular organisms → Bacteria → Acidobacteria	1460	Open in IMG/M
3300018466\|Ga0190268_11103948	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300018469\|Ga0190270_10087563	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300018469\|Ga0190270_11519685	Not Available	719	Open in IMG/M
3300018476\|Ga0190274_10177868	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300018476\|Ga0190274_10269498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1559	Open in IMG/M
3300018476\|Ga0190274_10531453	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300018481\|Ga0190271_10604159	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300019248\|Ga0180117_1064268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300019248\|Ga0180117_1242102	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300019356\|Ga0173481_10126061	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300021081\|Ga0210379_10555715	Not Available	511	Open in IMG/M
3300023102\|Ga0247754_1096929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300025310\|Ga0209172_10016563	All Organisms → cellular organisms → Bacteria	5612	Open in IMG/M
3300025315\|Ga0207697_10488386	Not Available	544	Open in IMG/M
3300025893\|Ga0207682_10004450	All Organisms → cellular organisms → Bacteria → Acidobacteria	5860	Open in IMG/M
3300025899\|Ga0207642_10522251	Not Available	730	Open in IMG/M
3300025903\|Ga0207680_10017497	All Organisms → cellular organisms → Bacteria	3789	Open in IMG/M
3300025903\|Ga0207680_10250407	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300025907\|Ga0207645_10220609	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300025908\|Ga0207643_10019376	All Organisms → cellular organisms → Bacteria	3728	Open in IMG/M
3300025918\|Ga0207662_10890679	Not Available	630	Open in IMG/M
3300025926\|Ga0207659_10325443	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300025931\|Ga0207644_11152113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300025932\|Ga0207690_10044580	All Organisms → cellular organisms → Bacteria → Acidobacteria	2925	Open in IMG/M
3300025933\|Ga0207706_10624219	Not Available	924	Open in IMG/M
3300025933\|Ga0207706_11149686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	647	Open in IMG/M
3300025945\|Ga0207679_10635627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300025945\|Ga0207679_11990199	Not Available	529	Open in IMG/M
3300026089\|Ga0207648_10232898	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300026118\|Ga0207675_100055757	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300026121\|Ga0207683_10040362	All Organisms → cellular organisms → Bacteria	4072	Open in IMG/M
3300027886\|Ga0209486_10233345	Not Available	1056	Open in IMG/M
3300027907\|Ga0207428_10299290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300027909\|Ga0209382_10023559	All Organisms → cellular organisms → Bacteria	7455	Open in IMG/M
3300027909\|Ga0209382_10049861	All Organisms → cellular organisms → Bacteria	4990	Open in IMG/M
3300028380\|Ga0268265_10275934	Not Available	1502	Open in IMG/M
3300028380\|Ga0268265_10293306	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300028380\|Ga0268265_10694015	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300028589\|Ga0247818_10423293	Not Available	900	Open in IMG/M
3300028809\|Ga0247824_10232548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300028812\|Ga0247825_10537164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	834	Open in IMG/M
3300031184\|Ga0307499_10012863	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300031548\|Ga0307408_102479558	Not Available	504	Open in IMG/M
3300031562\|Ga0310886_10113664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1370	Open in IMG/M
3300031740\|Ga0307468_101342792	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300031847\|Ga0310907_10319012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300031852\|Ga0307410_10842847	Not Available	782	Open in IMG/M
3300031858\|Ga0310892_10833916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300031892\|Ga0310893_10101258	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300031908\|Ga0310900_11624584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	547	Open in IMG/M
3300031908\|Ga0310900_11956794	Not Available	501	Open in IMG/M
3300031943\|Ga0310885_10016557	All Organisms → cellular organisms → Bacteria → Acidobacteria	2669	Open in IMG/M
3300032003\|Ga0310897_10261092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300032012\|Ga0310902_10459431	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300032157\|Ga0315912_10037410	All Organisms → cellular organisms → Bacteria	3879	Open in IMG/M
3300032157\|Ga0315912_10554929	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300032157\|Ga0315912_10873920	Not Available	715	Open in IMG/M
3300032157\|Ga0315912_11117679	Not Available	625	Open in IMG/M
3300032174\|Ga0307470_10341348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300032179\|Ga0310889_10071998	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300033551\|Ga0247830_11448252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.22%
Host-Associated	Host-Associated	48.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.97%
Terrestrial	Environmental → Terrestrial	42.28%
Aquatic	Environmental → Aquatic	8.94%
Human	Host-Associated → Human	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.82%
Freshwater	Environmental → Aquatic → Freshwater	3.25%
Sediment	Environmental → Aquatic → Sediment	3.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.63%
Marine	Environmental → Aquatic → Marine	0.81%
Digestive System	Host-Associated → Human → Digestive System	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.38%
Loam	Environmental → Terrestrial → Soil → Loam	4.06%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.25%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.25%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07838252	3300000033	Soil	MSVPSYPPLRWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
ICChiseqgaiiDRAFT_07840801	3300000033	Soil	MSVPSYPPLRWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDR
ICChiseqgaiiDRAFT_18931081	3300000033	Soil	MMALTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTXAEVIRXTEXRXWR*
JGI10216J12902_1003562041	3300000956	Soil	MVSSTFYPPVRWSLSALWALTALLIFMMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR*
JGI10216J12902_1096803731	3300000956	Soil	MTSFPTYPPTRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPQTIAEVIRATEDRR*
F14TB_1010496442	3300001431	Soil	MMSYALYPPVRWSLSALWLSCAIVIFLALGHSSLVSWMVLMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0055469_101218483	3300003999	Natural And Restored Wetlands	MMSFTLYPPVRWSLSALWSSCALLIFMALGASSLVSWMALIVAAVIPPVVFLCLWNDGPPPTIAEVIRATEERR*
Ga0062593_1005565322	3300004114	Soil	MMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0063356_1006145932	3300004463	Arabidopsis Thaliana Rhizosphere	MMSLTLYPPVRWSLCALWLSCAILIFLTLGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0062595_1024112342	3300004479	Soil	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0058859_108787882	3300004798	Host-Associated	MMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0062594_1003625602	3300005093	Soil	MMSLTLYPPVRWSLCALWLSCAILIFLALGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0065704_106463881	3300005289	Switchgrass Rhizosphere	MIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAALIPPVVLLTLWNDGPPPTIAEVLRATEERKWRTKGD*
Ga0070676_100041607	3300005328	Miscanthus Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070670_1002379103	3300005331	Switchgrass Rhizosphere	MMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVL
Ga0070677_100461823	3300005333	Miscanthus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0070666_100367582	3300005335	Switchgrass Rhizosphere	MSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0068868_1020697652	3300005338	Miscanthus Rhizosphere	MMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEV
Ga0070687_1000593721	3300005343	Switchgrass Rhizosphere	YPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070668_1000221014	3300005347	Switchgrass Rhizosphere	MMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070669_1012235352	3300005353	Switchgrass Rhizosphere	MMQSTFYPPVRWSLTALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0070675_1018965981	3300005354	Miscanthus Rhizosphere	MSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEV
Ga0070671_1002612321	3300005355	Switchgrass Rhizosphere	MPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070674_1000121755	3300005356	Miscanthus Rhizosphere	MMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVTALIPPAVFLTLWNDGPPPTVAEVIRATEDRR*
Ga0070674_1008075111	3300005356	Miscanthus Rhizosphere	HMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070700_1007681932	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0070665_1005341863	3300005548	Switchgrass Rhizosphere	TSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0070704_1008737303	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR*
Ga0070664_1021514831	3300005564	Corn Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFISLWNDGPSPTIAEVIRATEDRR*
Ga0068854_1016972882	3300005578	Corn Rhizosphere	VRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0068861_1015065542	3300005719	Switchgrass Rhizosphere	MMQSTFYPPVRCSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0075428_1000026749	3300006844	Populus Rhizosphere	MMSFTLYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0075428_1014865412	3300006844	Populus Rhizosphere	MMSFTLYPPVRWSLSALWSSCALLIFMALGASSFVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERR*
Ga0075428_1022216371	3300006844	Populus Rhizosphere	MIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDR
Ga0075431_1007337841	3300006847	Populus Rhizosphere	MIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDRKWRTKGD*
Ga0073934_100169388	3300006865	Hot Spring Sediment	MMSLTAYPPTRWSLSVLWAAGALLIFFAIGASSLVSLMMLMVAAVIPPVVFLSLWNDGPPPTIAEIIRATEDRR*
Ga0068865_1003462513	3300006881	Miscanthus Rhizosphere	EVGLSKESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0079215_113748002	3300006894	Agricultural Soil	MMSSTFYPPTRWSLSALWSSCALLIFMVLGASSLVSWMALLVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWR*
Ga0075419_101451412	3300006969	Populus Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0105106_112417422	3300009078	Freshwater Sediment	VLSLLIFMALDASSLRSWAALIVMGMVPPAVFMGLWNEGPPPTIAEVLHATEDRR*
Ga0075418_104307564	3300009100	Populus Rhizosphere	MSFTLYPPVRWSLSALWSSCALLIFMALGASSFVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERR*
Ga0114129_106539593	3300009147	Populus Rhizosphere	MMSFTLYPPVRWSLSALWLSCALVIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR*
Ga0105243_124227762	3300009148	Miscanthus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTISEVIRATEDRR*
Ga0111538_1000150927	3300009156	Populus Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR*
Ga0111538_135808001	3300009156	Populus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0134127_123611032	3300010399	Terrestrial Soil	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0137326_10625302	3300011417	Soil	MSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157305_101475201	3300012891	Soil	EVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157292_100759931	3300012900	Soil	PPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157290_101140221	3300012909	Soil	RNQQRSFETMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR*
Ga0164241_107763131	3300012943	Soil	MSVPSCPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLCNDGPSPTIAEVIRATEDRR*
Ga0157378_127006902	3300013297	Miscanthus Rhizosphere	MSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0163162_105579512	3300013306	Switchgrass Rhizosphere	MPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTFAEVIRATEDRR*
Ga0157375_117880682	3300013308	Miscanthus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0075320_10560652	3300014255	Natural And Restored Wetlands	LSALWSSCALLIFMALGASSLVSWMALIVAAVIPPVVFLCLWNDGPPPTIAEVIRATEERR*
Ga0157377_101853543	3300014745	Miscanthus Rhizosphere	QWSLSALWSSCALAIFVALGATSGASWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0157377_106149481	3300014745	Miscanthus Rhizosphere	IQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0180093_11012422	3300015258	Soil	LSALWSSCALAIFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0132258_103977751	3300015371	Arabidopsis Rhizosphere	VGLSKESAHMSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR*
Ga0184628_100319153	3300018083	Groundwater Sediment	MSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0184628_100698613	3300018083	Groundwater Sediment	MMHSTFYPPVRWSLSALWSLTALLIFIMLGASSVVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR
Ga0190265_104069832	3300018422	Soil	MMTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSGIPPVVFLSLWNDGPPPTIAEVLRATEDHRWRKSD
Ga0190268_111039482	3300018466	Soil	MTTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSAGIPPVVFLSLWNDGPPPTIAEVLRATEDRRWRRESD
Ga0190270_100875633	3300018469	Soil	MSVPSYPPIQWSLSALWSSCALAVFVALGATSGASWMILGVVSLIPPVVFLSLWNDGPSPTIAEVIRATEDRR
Ga0190270_115196851	3300018469	Soil	MRPFTIAVASYPPTRWSLSALWLSSALLIFMVIGSSSLVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWWSKSDR
Ga0190274_101778682	3300018476	Soil	MMTLTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRPWR
Ga0190274_102694981	3300018476	Soil	MMHSTFYPPVRWSLSALWSLTALLIFIMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRSTEERKWR
Ga0190274_105314532	3300018476	Soil	MMSFYPPTRWSLSALWSSCALAVFVALGATSVASFMVVGVIAVIPPIVFLALWNDGPPPTIAEVIRATEERR
Ga0190271_106041592	3300018481	Soil	MMTFPSHPPVRWSLSAIWVSSALLIFMALGVSSLVSWMVLLVSVIPPVLFLSLWNDGPPPTIAEVLRATEDHRWRKSD
Ga0180117_10642681	3300019248	Groundwater Sediment	MRPFTNAFASYPPTRWSLSALWLSSALLIFMAIGSSSLVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWWSKSDR
Ga0180117_12421022	3300019248	Groundwater Sediment	MVYSTFYPPVRWSLSALWALTALLIFMMLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEERKWR
Ga0173481_101260611	3300019356	Soil	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0210379_105557151	3300021081	Groundwater Sediment	MMSYTLYPPIRWSLSALWSSSALLIFMALGSTTLVSWMLLAVAAVIPPVVFLSLWNDGPPPTIAEVIR
Ga0247754_10969291	3300023102	Soil	LTEVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0209172_100165634	3300025310	Hot Spring Sediment	MMSLTAYPPTRWSLSVLWAAGALLIFFAIGASSLVSLMMLMVAAVIPPVVFLSLWNDGPPPTIAEIIRATEDRR
Ga0207697_104883862	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVICATEDRR
Ga0207682_100044506	3300025893	Miscanthus Rhizosphere	MMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207642_105222511	3300025899	Miscanthus Rhizosphere	MPVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207680_100174974	3300025903	Switchgrass Rhizosphere	MSVPSYPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVICATEDRR
Ga0207680_102504073	3300025903	Switchgrass Rhizosphere	ALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207645_102206091	3300025907	Miscanthus Rhizosphere	VCRALTEVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207643_100193761	3300025908	Miscanthus Rhizosphere	MMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0207662_108906792	3300025918	Switchgrass Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207659_103254433	3300025926	Miscanthus Rhizosphere	YPPLQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207644_111521132	3300025931	Switchgrass Rhizosphere	IQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTFAEVIRATEDRR
Ga0207690_100445804	3300025932	Corn Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEV
Ga0207706_106242191	3300025933	Corn Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207706_111496863	3300025933	Corn Rhizosphere	SFETMMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0207679_106356271	3300025945	Corn Rhizosphere	PPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207679_119901991	3300025945	Corn Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFISLWNDGPSPTIAEVIRATEDRR
Ga0207648_102328983	3300026089	Miscanthus Rhizosphere	MMSFTSYPPVRWSLSALWLSCALLTFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0207675_1000557573	3300026118	Switchgrass Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGTSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0207683_100403624	3300026121	Miscanthus Rhizosphere	MMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVIALIPPAVFLTLWNDGPPPTVAEVIRATEDRR
Ga0209486_102333452	3300027886	Agricultural Soil	MMSSTFYPPTRWSLSALWSSCALLIFMVLGASSLVSWMALLVAAVIPPVVFLSLWNDGPPPTIAEVLRATEDRRWR
Ga0207428_102992902	3300027907	Populus Rhizosphere	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0209382_100235597	3300027909	Populus Rhizosphere	MMSFTLYPPVRWSLSALWLSCALLIFLTLGHASLVSWMALMVSAIIPPVVFLCLWNDGPPPTIAEVLRATEDRR
Ga0209382_100498615	3300027909	Populus Rhizosphere	MIAFTLYPPIRWSLSALWMSSALLIFMTIGSSSVVSWMALAVAAVIPPAVFLTLWNDGPPPTIAEVLRATEDRKWRTKGD
Ga0268265_102759343	3300028380	Switchgrass Rhizosphere	MMSLTLYPPVRWSLCALWLSCAILIFLALGHSSLVSFMVLMVSAIIPPAVFLCLWNDGPPPTIAEVLRATEDRR
Ga0268265_102933061	3300028380	Switchgrass Rhizosphere	MMQSTFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKW
Ga0268265_106940152	3300028380	Switchgrass Rhizosphere	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPLVFLSLWNEGPSPTIAEVIRATEDRR
Ga0247818_104232931	3300028589	Soil	MSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0247824_102325482	3300028809	Soil	MMSFTSYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSAIIPPVVFLCLWNDGPPPTVAEVLRATEDRR
Ga0247825_105371641	3300028812	Soil	MMALTLYPPTRWSLSALWSLCAMLIFTVLDASSLVSWMVFLVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRPWR
Ga0307499_100128631	3300031184	Soil	MMSFYPPTRWSLSALWSSCALAVFVALGATSAASFMVVGVIAVIPPIVFLALWNDGPPPTIAEVIRATEERR
Ga0307408_1024795581	3300031548	Rhizosphere	MMSFTLYPPVRWSVSGLWSSCALLIFMALGATSLMSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVIRATEDRR
Ga0310886_101136643	3300031562	Soil	MSVPSYPPLRWSLSALWSSCALAVFVALGATSGVSWMILGVVSVIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0307468_1013427921	3300031740	Hardwood Forest Soil	MMQSTFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0310907_103190123	3300031847	Soil	EVGLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0307410_108428472	3300031852	Rhizosphere	MTSFPTYPPTRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPQTIAEVIRATEDRR
Ga0310892_108339162	3300031858	Soil	RALTEVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0310893_101012582	3300031892	Soil	MSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTI
Ga0310900_116245841	3300031908	Soil	TFYPPVRWSLSALWALTALLIFIMLGASSVVSWMALVVAAVIPPIVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0310900_119567942	3300031908	Soil	MMSFPSYPPTRWSLSALWSSCALAVFVALGATSGVSWMILGVTALIPPAVFLTLWNDGPPPTVAEVIRATEDRR
Ga0310885_100165571	3300031943	Soil	MMSFTPYPPVRWSLSALWLSCALLIFFALGNASLVSWMALMVSALIPPVVFLCLWNDGPPPTVAEVL
Ga0310897_102610923	3300032003	Soil	TVCRALTEVDLSKESTHMSVPSYPPIRWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0310902_104594312	3300032012	Soil	MSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAE
Ga0315912_100374104	3300032157	Soil	MVSLSPYPPMRWSLSALWSSCALAAFMAIGATSGASWMALGVIAVIPPIVFLTLWNDGPPPTIAEVIRATEDRR
Ga0315912_105549292	3300032157	Soil	MTALMTYPPVRWSLSALWLSAALLIFMVNGSASVVSCMELMVASLIPPAVILILWNDGPPPTIAEV
Ga0315912_108739201	3300032157	Soil	GLSKESAHMSVPSYPPIQWSLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR
Ga0315912_111176792	3300032157	Soil	MMSFPFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALMVAAVIPPVVFLSLWNDGPPPTIAEVLRSTEERKWR
Ga0307470_103413482	3300032174	Hardwood Forest Soil	MMQSTFYPPVRWSLSALWSLTALLIFITLGASSVVSWMALVVAAVIPPVVFLSLWNDGPPPTVAEVLRSTEERKWR
Ga0310889_100719984	3300032179	Soil	RWTLSALWSSCALAVFVALGATSGASWMILGVVSLIPPLVFLSLWNDGPSPTIAEVIRATEDRR
Ga0247830_114482522	3300033551	Soil	SLSALWSSCALAIFVALGATSGASWMILGVVSLIPPIVFLSLWNDGPSPTIAEVIRATEDRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences