Metagenome / Metatranscriptome Family F070812

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070812
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	91 residues
Representative Sequence	MLRALLVFCLVSVAAPALAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGLVWLR
Number of Associated Samples	97
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.90 %
% of genes near scaffold ends (potentially truncated)	95.90 %
% of genes from short scaffolds (< 2000 bps)	93.44 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.902 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.443 % of family members)
Environment Ontology (ENVO)	Unclassified (52.459 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.361 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 63.03% β-sheet: 0.00% Coil/Unstructured: 36.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03446	NAD_binding_2	30.33
PF14833	NAD_binding_11	6.56
PF01934	HepT-like	5.74
PF09130	DUF1932	3.28
PF01925	TauE	2.46
PF07589	PEP-CTERM	2.46
PF03466	LysR_substrate	2.46
PF11251	DUF3050	1.64
PF12840	HTH_20	1.64
PF01451	LMWPc	0.82
PF01077	NIR_SIR	0.82
PF04480	DUF559	0.82
PF01724	DUF29	0.82
PF00078	RVT_1	0.82
PF01909	NTP_transf_2	0.82
PF01053	Cys_Met_Meta_PP	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	5.74
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	5.74
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	3.28
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.46
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.82
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.82
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.82
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.82
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.82
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.82
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.82
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.82
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.82
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.72 %
Unclassified	root	N/A	3.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.72 %
Unclassified	root	N/A	3.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.90 %
Unclassified	root	N/A	3.28 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.80 %
Unclassified	root	N/A	3.28 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.97 %
Unclassified	root	N/A	3.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	75.41 %
Unclassified	root	N/A	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.41 %
Unclassified	root	N/A	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.41 %
Unclassified	root	N/A	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.41 %
Unclassified	root	N/A	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	75.41 %
Unclassified	root	N/A	3.28 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.82 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003351\|JGI26346J50198_1009907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300003505\|JGIcombinedJ51221_10290129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300004080\|Ga0062385_10350970	Not Available	865	Open in IMG/M
3300005167\|Ga0066672_10694081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300005179\|Ga0066684_10640511	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300005332\|Ga0066388_106781146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300005363\|Ga0008090_15555546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300005439\|Ga0070711_100757943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300005471\|Ga0070698_101307933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300005764\|Ga0066903_104824335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300005764\|Ga0066903_106470387	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006031\|Ga0066651_10804516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300006046\|Ga0066652_100773378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300006057\|Ga0075026_100686027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300009143\|Ga0099792_10646051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300010046\|Ga0126384_10059001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2680	Open in IMG/M
3300010046\|Ga0126384_10883370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300010046\|Ga0126384_11076778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300010048\|Ga0126373_10259184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1715	Open in IMG/M
3300010048\|Ga0126373_10803223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	1003	Open in IMG/M
3300010048\|Ga0126373_12069640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300010321\|Ga0134067_10405062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300010359\|Ga0126376_10637299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300010361\|Ga0126378_10100070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2859	Open in IMG/M
3300010361\|Ga0126378_13276715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300010376\|Ga0126381_102683913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300010376\|Ga0126381_103297296	Not Available	637	Open in IMG/M
3300010398\|Ga0126383_12804618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300012096\|Ga0137389_11672133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300012205\|Ga0137362_10721706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300012209\|Ga0137379_10998550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300012357\|Ga0137384_10204756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1651	Open in IMG/M
3300012363\|Ga0137390_10206480	All Organisms → cellular organisms → Bacteria → Proteobacteria	1952	Open in IMG/M
3300012683\|Ga0137398_10517152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300012685\|Ga0137397_10528261	All Organisms → cellular organisms → Archaea → Euryarchaeota	879	Open in IMG/M
3300012917\|Ga0137395_11254960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300012971\|Ga0126369_11049008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300016270\|Ga0182036_10579709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300016294\|Ga0182041_11264166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300016319\|Ga0182033_10185604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1641	Open in IMG/M
3300016319\|Ga0182033_10730758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300016341\|Ga0182035_10123287	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300016341\|Ga0182035_11258286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300016357\|Ga0182032_10739253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300016357\|Ga0182032_10770434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300016371\|Ga0182034_11130605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300016387\|Ga0182040_10178326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1542	Open in IMG/M
3300016445\|Ga0182038_10094387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2154	Open in IMG/M
3300016445\|Ga0182038_10578807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300020582\|Ga0210395_10135076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1836	Open in IMG/M
3300021171\|Ga0210405_10492883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	961	Open in IMG/M
3300021178\|Ga0210408_10158233	All Organisms → cellular organisms → Bacteria → Proteobacteria	1795	Open in IMG/M
3300021178\|Ga0210408_11465544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300021180\|Ga0210396_11708621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300021420\|Ga0210394_11771974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300021432\|Ga0210384_10879955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300021441\|Ga0213871_10120812	Not Available	781	Open in IMG/M
3300021476\|Ga0187846_10454311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300021559\|Ga0210409_11692263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300021560\|Ga0126371_12826108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300022533\|Ga0242662_10226828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300024288\|Ga0179589_10415210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300025915\|Ga0207693_10027051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4536	Open in IMG/M
3300026494\|Ga0257159_1072517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300026551\|Ga0209648_10219913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1432	Open in IMG/M
3300026999\|Ga0207949_1025522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300027882\|Ga0209590_10847831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300027903\|Ga0209488_10344559	Not Available	1108	Open in IMG/M
3300031231\|Ga0170824_108387651	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300031544\|Ga0318534_10327923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300031545\|Ga0318541_10588458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031545\|Ga0318541_10630995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300031545\|Ga0318541_10665262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031549\|Ga0318571_10275252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300031561\|Ga0318528_10748931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031564\|Ga0318573_10319826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	831	Open in IMG/M
3300031572\|Ga0318515_10269263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300031572\|Ga0318515_10320435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	831	Open in IMG/M
3300031573\|Ga0310915_11179281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031668\|Ga0318542_10441168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300031679\|Ga0318561_10010940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3946	Open in IMG/M
3300031679\|Ga0318561_10014645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3515	Open in IMG/M
3300031679\|Ga0318561_10589751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300031681\|Ga0318572_10836695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300031719\|Ga0306917_11232373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031719\|Ga0306917_11514233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300031723\|Ga0318493_10444822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300031744\|Ga0306918_10431683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300031747\|Ga0318502_10508644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300031747\|Ga0318502_10524210	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031748\|Ga0318492_10174876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300031764\|Ga0318535_10252059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300031770\|Ga0318521_10917544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031771\|Ga0318546_10221152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1298	Open in IMG/M
3300031771\|Ga0318546_11128703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031781\|Ga0318547_10183370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245	Open in IMG/M
3300031793\|Ga0318548_10585869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300031795\|Ga0318557_10498122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300031799\|Ga0318565_10493588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300031805\|Ga0318497_10115710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1448	Open in IMG/M
3300031819\|Ga0318568_10464560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	789	Open in IMG/M
3300031845\|Ga0318511_10147430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300031859\|Ga0318527_10368838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300031860\|Ga0318495_10233631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300031890\|Ga0306925_10441023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300031893\|Ga0318536_10213775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300031893\|Ga0318536_10268161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300031893\|Ga0318536_10569127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031912\|Ga0306921_10151656	All Organisms → cellular organisms → Bacteria	2712	Open in IMG/M
3300031941\|Ga0310912_10338322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300031942\|Ga0310916_11298243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300031945\|Ga0310913_10940409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300031946\|Ga0310910_10211731	All Organisms → cellular organisms → Bacteria → Proteobacteria	1506	Open in IMG/M
3300031946\|Ga0310910_10534050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300031962\|Ga0307479_11934043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300032025\|Ga0318507_10328886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300032039\|Ga0318559_10240297	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032059\|Ga0318533_10310245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300032076\|Ga0306924_10592245	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300032261\|Ga0306920_100094402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4423	Open in IMG/M
3300032261\|Ga0306920_103490885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300032261\|Ga0306920_103494334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.72%
Aquatic	Environmental → Aquatic	2.46%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.90%
Freshwater	Environmental → Aquatic → Freshwater	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Cave	Environmental → Terrestrial → Cave	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.34%
Loam	Environmental → Terrestrial → Soil → Loam	6.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.82%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26346J50198_10099071	3300003351	Bog Forest Soil	MLRLLLVCCLVCVTAPTLAQEYGSKDLSDAARDRRQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYTAAVGKLTSAIANGADDGLVWLRLAQS
JGIcombinedJ51221_102901291	3300003505	Forest Soil	MLRALLVLCLVSVAAPALGQEYQSKELAQAASDWRRELIERIPANKRQPAMIAGWRRMAEADYREKRYSAAIDELTRAIVNGADDGL
Ga0062385_103509701	3300004080	Bog Forest Soil	MLRALFVLCLVSVAAPAVAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRHMADADYKAKRYAAAIEELTRAIANGAD
Ga0066672_106940811	3300005167	Soil	MLRALLVLCLVSVAAPAPAQEYQSKELADAARDWRRELIDSIAANKKQPALIAGWRRMADADYQAKRYAAAIEELTRAIANGADDGLVWLRLAQNELAA
Ga0066684_106405111	3300005179	Soil	MLRSLLVLSLICAAAPAMAQDYQSKELAAAARDWRQELIDGLPANKKQPSLVAGLRRAAEIEYQAKDYRAAVGRLRSAIANGAD
Ga0066388_1067811461	3300005332	Tropical Forest Soil	MLRSLLVLCLVWVTVPVAAQEYRSNELADAARDWRQELIDGIPANKKQPNLIAGLRRAAEIEYKAKDYRAAIGRLRNAIANGADDGLVWLRL
Ga0008090_155555461	3300005363	Tropical Rainforest Soil	MLRALLLFFVFAAAPVVAQEYQSKELADSARDWRQELTDSVPANKKQPNLVAALRRTAEVEYQAKDYRAAIGRLTSAIANGADD
Ga0070711_1007579432	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLRALLVFCLVSVAAPALAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDG
Ga0070698_1013079331	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLRSLLVLCLVCIAAPVMAQEYKSKELTDAARDWRQELIDGIPANKKQPNLVAGLRRAAEIEYQAKDYRAAVGRLRSAIANGAD
Ga0066903_1048243351	3300005764	Tropical Forest Soil	MRALLVLCLVCVAAPALAQEYQSKELGDAARDWRQELMDRVPTNKKQPATAAALRRAAEVEYQGKHYASAIDKLTSAIANGADDGLVW
Ga0066903_1064703872	3300005764	Tropical Forest Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAEAASDWRRELGDRIPANKRQPAMIAGWRRIAESDYQAKRYAAAIDELTRAIANGAD
Ga0066651_108045161	3300006031	Soil	LRAFLVLFLVSAAAPALGQEYQSKELAEAASDWRRELIERIPANKRQPAMIAGWRRMAESDYREKRYAAAIDELTRAIANGADDGLVW
Ga0066652_1007733781	3300006046	Soil	MLRSLLLLCLVCVAIPAAAQEYKSKELADAARDWRRELVDGIPANKKQPNLVAGLRRAAEIEYQAKDYRAALGRLRSAIANGADDGLVWLRL
Ga0075026_1006860272	3300006057	Watersheds	MLRLLLVCCLVCVTAPALAQEYQSKELADAAHDWRQELIDSVPANKKQRNLVAALRRTAEIEYQAKDYSAAMGKLMSAIANGADDGL
Ga0099792_106460512	3300009143	Vadose Zone Soil	MLRALLVLCLVCIAAPTLAQEYRSKELADAARDWRRELIDGIPANKKQPNLVAGLRRAAEIEYQAKDYRAAIGRLRSAIANGADDGLVWLRLAQSE
Ga0126384_100590011	3300010046	Tropical Forest Soil	MLRALLVLCLISTATPALAQEYQSKELADAAADWRRELIDRIPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGADDGLLWLRLGQSEFAA*
Ga0126384_108833702	3300010046	Tropical Forest Soil	MLRPLLVLCLVCFISPALAQEYQSKELADAAREWRQELIESVPANQKQSSLVAGLRRTAEIEYQAKDFAAAIGKLTSAIANGADDGLVWLRLAQSEF
Ga0126384_110767782	3300010046	Tropical Forest Soil	MLRALLVFCLVSIAAPALGQEYQSKELGDAARDWRRELIERIPANKRQPAMIAGWRRTAEADYREKRYTAASDGLTRAIANGADDGLVWLRLAQAELAAED
Ga0126373_102591841	3300010048	Tropical Forest Soil	MLRALLMLCLVSLSAPALGQEYQSKDLADAAKGWRQELIERIPANKRQPAMIAGWRRMAESDYQAKRYAAAMDELTRAIANGADDG
Ga0126373_108032232	3300010048	Tropical Forest Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAEAASDWRRELGDRIPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGADD
Ga0126373_120696401	3300010048	Tropical Forest Soil	LASPALAEKYQSKQLANAAPGWCQELINSTPVNEKQPGLISGWRRAVEADYQAKRDAVAIDELTRAIANPADDGLVWLRLAQNERAAGADYG*
Ga0134067_104050621	3300010321	Grasslands Soil	MLRALLVFCLVSMAAPALAQEYQSKELADAASDWRRGLIDSIPANKKQPALIAGWRRMADADYQAKRYAAAIEELTRAIANGADDGLVWLRLA
Ga0126376_106372991	3300010359	Tropical Forest Soil	MLRSLLVLCLVFAAPALAQEYQSKELADAARDWRQELIDSVPANKKQPGLIAGWRRAADGDYQAKRYAAAIDELTRAIANGADDGLVWLRLAQNELA
Ga0126378_101000701	3300010361	Tropical Forest Soil	MLRSLFVICLVCFTAPALGEEYQSQELADAAKDWRQELIDSVLANKKQPNLVAGLRRTAEVEYQAKDYRAAIGKLTSAIANGADDGL
Ga0126378_132767151	3300010361	Tropical Forest Soil	MLRSLLVLCLVFASPALAQEYQSKELAGAARDWRQELIDSVPANKKQPGLIANWRRAADGDYQAKRYAAAIDELTRAIANGADDGLVW
Ga0126381_1026839131	3300010376	Tropical Forest Soil	MRRLLMVVCLLCVTAPTLAQEYKSTELADAAREWRQELIGSVPANKKQANLIAGLRRTAETEYQANDYAAAIGKLTSAIANGADDSLVWLRLA
Ga0126381_1032972962	3300010376	Tropical Forest Soil	MLRALLMLCLVSLSAPALGQEYQSKDLADAAKGWRQELTERVPANKRQPAMIAAWRRMAESDYQAKRYAAAIDELTRVIANGVDDGLVWLRL
Ga0126383_128046181	3300010398	Tropical Forest Soil	MLRSLLVLCLICLTAPVLAQEYKSKELADAAPDWRRELIDGIPANKKQPNLVAGLRRAAEIEYQAKDYRAAIGRLRSAIANGADDGLVWLRLAQSELA
Ga0137389_116721331	3300012096	Vadose Zone Soil	MLRAVVIFCVLCVAAPALAQEYQSKELADAARDWRQELIDRIPANKKQPALIAGWRRMAEADYQAKRYAAAIDELTRAIAN
Ga0137362_107217061	3300012205	Vadose Zone Soil	MLRALLVFCLVCVAGPALAQEYQSKELADAARDWRQQLIDSIPANKKQPALIAGLRRTAEADYQAKRYAAAIDELTRAIANGADDGLV
Ga0137379_109985501	3300012209	Vadose Zone Soil	MLRALLVFCLVCVAGPALAQEYQSKELADAARDWRQQLIASIPATKKQPGLIAGLRRTAETDYQAKRYAAAIDELMRAIANGADDGLVWLRLAQNELGAQDAHAMA
Ga0137384_102047561	3300012357	Vadose Zone Soil	MLRALLVFCLVCVAGPALAQEYQSKELADAARDWRQQLIASIPASKKQPGLIAGLRRTAETDYQAKRYAAAIDELMRAI
Ga0137390_102064804	3300012363	Vadose Zone Soil	MLRSLLVFCLVCVTAPALAQEYQSKELADAARDWRREVIDGIPANKKQPNLVAGLRRAAEIEYQAKDYRAAIGRLRSAIANGAD
Ga0137398_105171522	3300012683	Vadose Zone Soil	MLRALLVFCLVSVAAPAVGQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRFPAAIEGLTRAIANGADDGLVWLRLAQNE
Ga0137397_105282613	3300012685	Vadose Zone Soil	MLRGLLVFCLVCVAGPTLAQEYQSKELADAARAWRQELIDSIPANKKQPGLIAGWRRMAETDYQAKRYAAAIDELTRAIANGADDGLVWLRLAQ
Ga0137395_112549601	3300012917	Vadose Zone Soil	MLRSLLVLCLVCIAAPTLAQEYRSKELADAARDWRRELIDGIPANKKQPNLVAGLRRAAEIEYQAKDYRSAVGRLRSAIANGADD
Ga0126369_110490082	3300012971	Tropical Forest Soil	MLRSLLVLCLVFASPALAQEYQSKELADVARDWRQELIDSVPASKKQPGLIAGWRRAADADYQAKRYAAAIDELTRAIANGADDGLVWLRLAQ
Ga0182036_105797092	3300016270	Soil	MLRSLFVICLVCVASPALAQEYQSKELADAARDWRRELIDSVPANKKQPSLVAALRRTAEVEYQAKDYRAAIGKLTSAIANGADDGLVWLRLAQSELAA
Ga0182041_112641661	3300016294	Soil	MLRALLFLVVFAAAPAAAQEYQSKELADAAHEWRQELIDTVPANKKQPNIVAGLRRTAEIEFQAKDYSAAIGKLTSAIANGADDGLVWLRLAQSE
Ga0182033_101856041	3300016319	Soil	MLRALLVLCLVSTAAPGLTQEYQSKELADAASDWRRELTDRIPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGADDGLVW
Ga0182033_107307581	3300016319	Soil	MFRALLLLLAFAAGPALAQDYQSKELADAAGDWRRELLDSVPAARKQPNLVPALRRTAEVEYQAKDYAAAIGKLQSAIANGADDGLVWLRLAQSELA
Ga0182035_101232872	3300016341	Soil	MLRSLLVLCLVFASPALAQEYQSKELADAARDWRQELIDSVPANKKQPGLIAGWRRAADADYQAKRYAAAIDELTRAIANGADDGLVWLRLAQNELA
Ga0182035_112582861	3300016341	Soil	MLRPLLVFCLVCVASPALAQDYQSRELADVARDWRQQLIDSIPANKKQPGLVTGLRRAADADYHGKRYAPAIEELTRAIANGADDGLVWLRLAQNEL
Ga0182032_107392531	3300016357	Soil	LRALLLLFVFVVAPAAAQEYQSNQLADAASDWRRELIDSVPANKKQPNLVAALRRTAEVEYQGKDYKAAIGKLTSAIANGADDGLVW
Ga0182032_107704341	3300016357	Soil	MLRALLLVLVFAATPAAAQEYQSKELADAARDWRRELIDSIPANKKQPSLVAALRRTAEVEYQAKDYRAAIGRLTTAIANGADDGLVWLRLAQS
Ga0182034_111306051	3300016371	Soil	MLRALLFLVVFAAAPAAAQEYQSKELADAAHEWRQELIDTVPGNKKQPNIVAGLRRTAEIEFQAKDYSAAVGKLTSAIANGADDGLVWLRLAQSEL
Ga0182040_101783261	3300016387	Soil	MLRPLLVFCLVCVASPALAQDYQSRELADAARDWRQQLIDSIPANKKQPGLVTGLRRAADADYHGKRYAPAIEELTRAIANG
Ga0182038_100943874	3300016445	Soil	MLRLPSVFCLICFTVSALAQEYQSKELADAARDWRQELIDSVPANKKQLGVVAGLRRTAEIEYQAKDYSAAIGKLTSAIANGSDDGLVWLRLAQSELAAN
Ga0182038_105788072	3300016445	Soil	MLRALLLLVFAAAPAAAQDYQSKELADAAREWRQELINSIPANKKQPNLVAGLRRTAEIEYQAKDYRAAIGKLTSAIANGTDDGLVWLRLAQSELA
Ga0210395_101350761	3300020582	Soil	MLRALLVLCLVSIAAPGLAQEYQSKDLATAASDWRRELIDRIPANKRQPAMIAGWRRMAESDYREKRYPAAIDELTRAIVNG
Ga0210405_104928831	3300021171	Soil	MLRALLVLCLVSIAAPALGQEYQSKELAQAASDWRRELIERIPTNKRQPAMIAGWRRMAEADYREKRYPAVIDELTRAIVNGADDGLVWLRLAQAELAAEDDH
Ga0210408_101582334	3300021178	Soil	MLRALLVFCLVFAAAPAMAQEYQSKDLSDAARDWRRELIDGVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGL
Ga0210408_114655441	3300021178	Soil	MLRALLVFCLVCVAGPALAQEHQSKELADAARDWRQQLIDSIPANKKQPGLIAGWRRMAETDYQGKRYAAAIDELQRAIANGADDGLVWLRL
Ga0210396_117086211	3300021180	Soil	LRALLMLCLVSVAAPVLGQEYQSKELAEAASDWRRELIERIPANKRQPAMIAGWRRMAEADYREKRYAAAIDELTRAIVNGADDGLVWLRLAQ
Ga0210394_117719742	3300021420	Soil	MLRALLVLCLVSTAAPGMAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGLVWLRLAQNELAA
Ga0210384_108799551	3300021432	Soil	MLRALLVFCLVSVAAPALAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAISNGADD
Ga0213871_101208122	3300021441	Rhizosphere	MLRALLVVCLVGIAGPAIAQEYQSKELADAARDWRRELIDSIPANKKQPALIAGLRRAAEADYQAKRYTAAIDELTRAIANGA
Ga0187846_104543111	3300021476	Biofilm	MLRALLLLVVFATAPALAQEYQSKELADAARDWRRELIDSVPANKKQPGLVAALRRTAEVEYQAKDFRAAIGRLTSAIANGAD
Ga0210409_116922632	3300021559	Soil	LRALLMLCLMSVAGPALGQEYQSKELAQAASDWRRELIERIPANKRQPAMIAGWRRMAEADYREKHYSAAIDELTRAIVNGADDGLVWLRLAQTE
Ga0126371_128261081	3300021560	Tropical Forest Soil	LRALLVLCLVLASPALAEKYQSKQLANAAPGWCQELINSTPVNEKQPGLISGWRRAVEVDYQAKRDAVAIDELTRAIANPADDGLVWLRLAQNER
Ga0242662_102268282	3300022533	Soil	MLRALLVFCLVSVAAPGMAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGLV
Ga0179589_104152102	3300024288	Vadose Zone Soil	MLRALLVFCLVSVAAPAVGQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRMADTDYQAKRYAAAIEELTRAITNGADD
Ga0207693_100270511	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLRALLLFCLVSAAAPAVAQEYQSKELADAARDWRRELIDSVPANKKQPAQIAGWRRMADTDYQAKRYTAAIEELTRAIANGADDGLVWLRLAQNE
Ga0257159_10725172	3300026494	Soil	MLRALLVFCLVSVAAPALAQEYQSKELADAARDWRRELIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGLVWLR
Ga0209648_102199132	3300026551	Grasslands Soil	MLRTLLVFCLVCVASPTLAQEYQSKELADTARDWRQELINSIPANKKQPGQIAGWRRNAEADYQAKRYAAAIDGLTRAIANGADDGLVWLRLAQWSAPTTPI
Ga0207949_10255222	3300026999	Forest Soil	MLRALLVLCLVSTAAPAVAQEYQSKDLSDAARDWRREVIDSVPANKKQPALIAGWRRTADADYQAKRYAAAIEELTRAIANGADDGLVWL
Ga0209590_108478312	3300027882	Vadose Zone Soil	MLRAVVIFCVLCVAAPALAQEYQSKELADAARDWRQELIDRIPANKKQPALIAGWRRMAEADYQAKRYAAAIDELTRAIANGADDGLVWLR
Ga0209488_103445591	3300027903	Vadose Zone Soil	LRGLLVFCLVCVAGPALAQEYQSKELADAARDWRQELIESIPANKKQPGLIAGWRRNAETDYQAKRYAAAIDELTRAIANGADDGLVWLRLAQNELAAQDD
Ga0170824_1083876511	3300031231	Forest Soil	MLRALLVLCLVSVAAPALGQEYQSKELAETASNWRRELIERIPANKRQPAMIAGWRRMAESDYREKRYAAAIDELIHA
Ga0318534_103279232	3300031544	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIANGADDGLVW
Ga0318541_105884581	3300031545	Soil	MLRLLLVCCLVCVTAPTLAQEYQSKELADAARDWRQELIDSVPAGKKQPNLVAALRRTAEIEYQAKDYTAAIAKLTSAIANGADDGLLWLRLAERARR
Ga0318541_106309952	3300031545	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIANGADD
Ga0318541_106652622	3300031545	Soil	MLRSLLVLCLVCAASALAQEYQSKELADPARDWRQELINGVPANKKQPGLIAGWRRAAEADYQAKRYAAAIDELIRAIANGG
Ga0318571_102752522	3300031549	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIANGGR
Ga0318528_107489311	3300031561	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAALDWRQELIDSVPANKKRPNLSAALRRTAEIEYQAKDYTAAIGKLTSAIANGADDG
Ga0318573_103198262	3300031564	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAARDWRQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYAAAIGKLTSAVANGADDGLVWLRLAQ
Ga0318515_102692632	3300031572	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAARDWRQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYAAAIGKLTSAVANGADDGLVWLRLA
Ga0318515_103204352	3300031572	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIANGADDGLVWLRLAQ
Ga0310915_111792811	3300031573	Soil	MLRALLLLFVFAAAPAAAQEYQSKELADAARDWRQELIDSVPANKKQPGLVTALRRTAEVEYQAKDYRAAIGRLTTAIANGADD
Ga0318542_104411681	3300031668	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIANGADDGLVWLRLA
Ga0318561_100109405	3300031679	Soil	MLRSLLVLCLVCIASPALAQEYQSKELADTARDWRQQLIDSVPANKKQPGLVAGWRRTADADYQAKRYAAAIDELTRAIANGAD
Ga0318561_100146451	3300031679	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAARDWRQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYAAAIGKLTSAVANGADDGLVWLRLAQSELAANDD
Ga0318561_105897511	3300031679	Soil	MLRALLLLVFAAAPAAAQDYQSKELADAAREWRQELINSIPANKKQPNLVAGLRRTAEIEYQAKDYRAAIGKLTSAIANGTDDGLVWLRLAQSELAASDDH
Ga0318572_108366951	3300031681	Soil	MLRSLFVICLVCVASPALAQEYQSKELADAARDWRRELIDSVPANKKQPSLVAALRRTAEVEYQAKDYRAAIGKLTSAIANGADDGL
Ga0306917_112323731	3300031719	Soil	MLRALLALCLVSVAAPAVAQEYQSKELAEAARDWRRELIDSVPANKKQPALIAGWRRMADADYQAKRYAAAIEELTHAIANGADDGLVWLRLAQNELAAEDDHA
Ga0306917_115142332	3300031719	Soil	LRALLMLCLMSVAAPALGQEYQSKELAQAASDWRRELIERIPANKRQPAMIDGWRRMAETDYREKRYSAAIDELTRAIVN
Ga0318493_104448222	3300031723	Soil	MLRSLLVLCLITVASPALAQDYQSKELADAARDWRQQLIDSIPANKKQPGLVAGLRRMADADYHAKRYAPAIDELTRAIANGADDGLVWLRLAQNEVAAE
Ga0306918_104316831	3300031744	Soil	MLRALLLLFVFAAAPAAAQEYQSKELADAARDWRQELIDSVPANKKQPGLVTALRRTAEVEYQAKDYRAAIGRLTTAIANGADDGLVWLRLAQS
Ga0318502_105086442	3300031747	Soil	MLRALLVVCLICASAPVPAQEYQSKELADAARDWRRELIDSIPANKKQPGVVTGLRRTAEVDYRAKRYAAAIDELTRAIAN
Ga0318502_105242101	3300031747	Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAGAASDWRRELTDRIPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGA
Ga0318492_101748761	3300031748	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAARDWRQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYAAAIGKLTSAVANGADDGLVWLRLAQSELAANDDHA
Ga0318535_102520591	3300031764	Soil	MLRLLMVFCLVCFSAPTLAQEYQSKELADAALDWRQELIDSVPANKKQPNLSAALRRTAEIEYQAKDYTAAIGKLTSAIANGADDGLVWLRLAQSELAAN
Ga0318521_109175441	3300031770	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAALDWRQELIDSVPANKKRPNLSAALRRTAEIEYQAKDYTAAIGKLTSAIANGADDGLVWLRLAQ
Ga0318546_102211521	3300031771	Soil	MLRALLLLVFAAAPAAAQDYQSKELADAAREWRQELINSIPANKKQPNLVAGLRRTAEIEYQAKDYRAAIGKLTSAIANGTDDGL
Ga0318546_111287032	3300031771	Soil	MLRALLLLFVFAAAPALAQEYQSNELADTARDWRQELIDSVPASKKQPNLVAAWRRTAEVEYQGKDYRAAIGKLTSTIANGADDGLVWLRLAQSE
Ga0318547_101833702	3300031781	Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAAAASDWRRELGDRLPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGADDGLVWLRLAQNEL
Ga0318548_105858692	3300031793	Soil	MLRALLLLFVFAAAPALAQEYQSNELADTARDWRQELIDSVPASKKQPNLVAAWRRTAEVEYQGKDYRAAIGKLTSAIANGADDGLVWLRLAQ
Ga0318557_104981222	3300031795	Soil	MLRSLLVLCLITVASPALAQDYQSKELADAARDWRQQLIDSIPANKKQPGLVAGLRRMADADYHAKRYAPAIDELTRAIAN
Ga0318565_104935881	3300031799	Soil	MLRLPSVFCLICFTVSALAQEYQSKELADAARDWRQELIDSVPANKKQLGVVAGLRRTAEIEYQAKDYSAAIGKLTSAIANGADDGLVWLRLAQSDLAANDD
Ga0318497_101157102	3300031805	Soil	MLRSLLVLCLVCITAPTLAQEYQSKELADAARDWRQELIDSVPANKKQANLIAGLRRTAESEYQAKDYKAAIGKLQSAIANGADD
Ga0318568_104645601	3300031819	Soil	MLRLPSVFCLICFTVSALAQEYQSKELADAARDWRQELIDSVPANKKQLGVVAGLRRTAEIEYQAKDYSAAIGKLTSAIANGADDG
Ga0318511_101474302	3300031845	Soil	MLRLPSVFCLICFTVSALAQEYQSKELADAARDWRQELIDSVPANKKQLGVVAGLRRTAEVEYQAKDYSAAIGKLTSAIANGADDG
Ga0318527_103688381	3300031859	Soil	MLRSLLVLCLITVASPALAQDYQSKELADAARDWRQQLIDSIPANKKQPGLVAGLRRMADADYHAKRYAPAIDELTRAIANGADDGLVWLQLAQNE
Ga0318495_102336312	3300031860	Soil	MLRSLFVICLVCFTAPALGQEYQSKELADAARDWRQELIDSIPANKKQPSLAAALRRTAEIEYQAKDYRAAIGRLTSAIANGADD
Ga0306925_104410231	3300031890	Soil	MLRALLLLFVFAAAPALAQEYQSNELADTARDWRQELIDSVPASKKQPNLVAAWRRTAEVEYQGKDYRAAIGKLTSAIANGADDGLVWL
Ga0318536_102137753	3300031893	Soil	LRALLLLFVFVAAPAAAQEYQSKELADAARDWRQELIDSVPANKKQPNLVAALRRTAEVEYQGKDYKAAIGKLTSAIANGADDGLVWLRLAQ
Ga0318536_102681611	3300031893	Soil	MLRLLMVFCLVCFSAPTLAQEYQSKELADAALDWRQELIDSVPANKKQPNLSAALRRTAEIEYQAKDYTAAIGKLTSAIANGADDGLVWLRLAQS
Ga0318536_105691271	3300031893	Soil	MLRALLALCLVSVAAPAVAQEYQSKELAEAARDWRRELIDSVPANKKQPALIAGWRRMADADYQAKRYAAAIAWVNSSIAAA
Ga0306921_101516564	3300031912	Soil	MLRLLMVFCLVCVTAPTLAQEYQSKELADAALDWRQELIDSVPANKKRPNLSAALRRTAEIEYQAKDYTAAIGKLTSAIANGADDGLVWLRLA
Ga0310912_103383224	3300031941	Soil	MLRALLLLFVFAAAPALAQEYQSNELADTARDWRQELIDSVPASKKQPNLVAAWRRTAEVEYQGKDYRAAIGKLTSAIANGADDGLVWLRLAQS
Ga0310916_112982431	3300031942	Soil	MLRALLFLVVFAAAPAAAQEYQSKELADAAHEWRQELIDTVPANKKQPNIVAGLRRTAEIEFQAKDYSAAIGKLTSAIANGADDGLVW
Ga0310913_109404091	3300031945	Soil	MLRALLVLCLASLVAPALGQEYQSKDLADAAKGWRQELTERIPANKRQPAIIAGWRRMAESDYQAKRYAAAIDELTRAITNGADDGLVWLRLAQSELAAEDDHA
Ga0310910_102117314	3300031946	Soil	MLRALLLLFVFAAAPALAQEYQSNELADTARDWRQELIDSVPASKKQPNLVAAWRRTAEVEYQGKDYRAAIGKLTSAIANGADDGLV
Ga0310910_105340501	3300031946	Soil	MLRPLLVFCLVCVASPALAQDYQSRELADAARDWRQQLIDSIPANKKQPGLIAGLRRMADADYHAKRYAAAIEELTRAIANGADDGLVWLRLAQNELAAEDD
Ga0307479_119340431	3300031962	Hardwood Forest Soil	MLRMLLLFCLVWVTVPALAQEYQSKELAEAAREWRQELIDSVPANKKQPNLVAALRRTAEVEYQAKDYTAAIGKLTSAIANGADDGLI
Ga0318507_103288861	3300032025	Soil	MLRSLFVICLVCFTAPALGQEYQSKELADAARDWRQELIDSIPANKKQPSLAAALRRTAEIEYQAKDYRAAIGRLTSAIANGADDGLVWLRLAQS
Ga0318559_102402971	3300032039	Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAAAASDWRRELGDRLPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIAH
Ga0318533_103102451	3300032059	Soil	MLRALLVFCLVCVAAPSLAQEYQSKELSDAARDWRRELVESVPVNRKQPGLVAGWRRTAELDYQAKHFGGAIDLLTRAIANGADDGL
Ga0306924_105922451	3300032076	Soil	MLRALLVFCLVCVAAPSLAQEYQSKELSDAARDWRRELVESVPVNRKQPGLVAGWRRTAELDYQAKHFGGAIDLLTRAIANGADDG
Ga0306920_1000944021	3300032261	Soil	MLRALLVLCLVSTAAPGLTQEYQSKELAAAASDWRRELGDRIPANKRQPAMIAGWRRMAESDYQAKRYAAAIDELTRAIANGADDGLVWLRLG
Ga0306920_1034908851	3300032261	Soil	MLRALLLLFVFAGAPALAQEYQSKELADTARDWRQELIDSVPANKKQPGLVPALRRTAEVEYQTKDYRAAIGRLTTAIANGADDGLVWLRLAQSELAAND
Ga0306920_1034943341	3300032261	Soil	MLRLLMVFCLVCFSAPTLAQEYQSKELADAARDWWQELIDSVPANKKQPNLVAALRRTAEIEYQAKDYSAAVGKLMSAIANGADDGLVWLRLAQSELAAND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070812

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences