Metagenome / Metatranscriptome Family F070945

Basic Information
Family ID	F070945
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	81 residues
Representative Sequence	MLILGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTYYTEYQK
Number of Associated Samples	46
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.93 %
% of genes near scaffold ends (potentially truncated)	45.90 %
% of genes from short scaffolds (< 2000 bps)	44.26 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Unclassified (86.885 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (59.836 % of family members)
Environment Ontology (ENVO)	Unclassified (59.836 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.033 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.25% β-sheet: 4.04% Coil/Unstructured: 70.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF01695	IstB_IS21	3.28
PF13229	Beta_helix	2.46
PF07366	SnoaL	2.46
PF12728	HTH_17	1.64
PF12833	HTH_18	0.82
PF11303	DUF3105	0.82
PF07690	MFS_1	0.82
PF12697	Abhydrolase_6	0.82
PF00149	Metallophos	0.82
PF13384	HTH_23	0.82
PF06736	TMEM175	0.82
PF13751	DDE_Tnp_1_6	0.82
PF02545	Maf	0.82
PF03992	ABM	0.82
PF13936	HTH_38	0.82
PF00872	Transposase_mut	0.82
PF13358	DDE_3	0.82
PF06041	DUF924	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	3.28
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.82
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.82
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
All Organisms	root	All Organisms	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
cellular organisms	root	All Organisms → cellular organisms	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	7.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	7.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	7.38 %
Bogoriellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae	0.82 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	3.28 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	2.46 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.82 %
Georgenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.89 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3.28 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	1.64 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.82 %
Georgenia ruanii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia ruanii	0.82 %
Nocardia mexicana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia mexicana	0.82 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006894\|Ga0079215_10555320	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300006918\|Ga0079216_11859481	Not Available	519	Open in IMG/M
3300009789\|Ga0126307_11080371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia mexicana	649	Open in IMG/M
3300009789\|Ga0126307_11717857	Not Available	510	Open in IMG/M
3300009789\|Ga0126307_11740649	Not Available	507	Open in IMG/M
3300009840\|Ga0126313_10053508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2855	Open in IMG/M
3300010036\|Ga0126305_10074290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1989	Open in IMG/M
3300010036\|Ga0126305_10887288	Not Available	609	Open in IMG/M
3300010036\|Ga0126305_10949380	Not Available	588	Open in IMG/M
3300010038\|Ga0126315_10738712	Not Available	645	Open in IMG/M
3300010038\|Ga0126315_10953262	Not Available	573	Open in IMG/M
3300010039\|Ga0126309_10258997	Not Available	989	Open in IMG/M
3300010039\|Ga0126309_10267144	All Organisms → cellular organisms → Bacteria → Terrabacteria group	976	Open in IMG/M
3300010039\|Ga0126309_11167781	Not Available	527	Open in IMG/M
3300010039\|Ga0126309_11169156	Not Available	527	Open in IMG/M
3300010040\|Ga0126308_10035929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2800	Open in IMG/M
3300010040\|Ga0126308_10229989	Not Available	1200	Open in IMG/M
3300010040\|Ga0126308_10743933	Not Available	676	Open in IMG/M
3300010040\|Ga0126308_10981853	Not Available	591	Open in IMG/M
3300010040\|Ga0126308_11298135	Not Available	517	Open in IMG/M
3300010041\|Ga0126312_10102747	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300010042\|Ga0126314_11017479	Not Available	615	Open in IMG/M
3300010042\|Ga0126314_11296093	Not Available	546	Open in IMG/M
3300010044\|Ga0126310_10084606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1878	Open in IMG/M
3300010044\|Ga0126310_10451185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	928	Open in IMG/M
3300010044\|Ga0126310_10936040	Not Available	678	Open in IMG/M
3300010044\|Ga0126310_11245447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	599	Open in IMG/M
3300010045\|Ga0126311_10682320	Not Available	820	Open in IMG/M
3300010045\|Ga0126311_11095439	Not Available	655	Open in IMG/M
3300010045\|Ga0126311_11185566	Not Available	631	Open in IMG/M
3300010045\|Ga0126311_11226508	Not Available	621	Open in IMG/M
3300010045\|Ga0126311_11614014	Not Available	546	Open in IMG/M
3300010137\|Ga0126323_1088733	Not Available	563	Open in IMG/M
3300014488\|Ga0182001_10504746	Not Available	557	Open in IMG/M
3300018465\|Ga0190269_10601700	Not Available	743	Open in IMG/M
3300018465\|Ga0190269_10827703	Not Available	671	Open in IMG/M
3300018466\|Ga0190268_10781444	Not Available	719	Open in IMG/M
3300018466\|Ga0190268_11527129	Not Available	582	Open in IMG/M
3300018466\|Ga0190268_12000537	Not Available	533	Open in IMG/M
3300018466\|Ga0190268_12168319	Not Available	518	Open in IMG/M
3300018469\|Ga0190270_11542320	Not Available	714	Open in IMG/M
3300018476\|Ga0190274_12439751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	620	Open in IMG/M
3300018476\|Ga0190274_13172880	Not Available	553	Open in IMG/M
3300027075\|Ga0214467_1023797	Not Available	673	Open in IMG/M
3300028578\|Ga0272482_10094499	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300028722\|Ga0307319_10293283	Not Available	538	Open in IMG/M
3300030496\|Ga0268240_10029697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1090	Open in IMG/M
3300030903\|Ga0308206_1126376	Not Available	596	Open in IMG/M
3300031731\|Ga0307405_10103480	Not Available	1915	Open in IMG/M
3300031824\|Ga0307413_10178456	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300031824\|Ga0307413_12025209	Not Available	519	Open in IMG/M
3300031852\|Ga0307410_12072883	Not Available	508	Open in IMG/M
3300031995\|Ga0307409_100484974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1200	Open in IMG/M
3300032005\|Ga0307411_10985727	Not Available	754	Open in IMG/M
3300032080\|Ga0326721_10231491	Not Available	994	Open in IMG/M
3300032126\|Ga0307415_100147805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia → Georgenia ruanii	1804	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.07%
Host-Associated	Host-Associated	13.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.25%
Plants	Host-Associated → Plants	13.93%
Aquatic	Environmental → Aquatic	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.48%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.82%
Phylloplane	Host-Associated → Plants → Phylloplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.66%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Sand	Environmental → Terrestrial → Soil → Sand	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.82%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	77.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	59.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.82%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.82%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079217_109178682	3300006876	Agricultural Soil	MLLLALLAAMMLVASPVLAWQPAPNEGSKYSKNYYPNTYFNYCKPDGSRYYGNTRASKHYWCYKYYTEYQKKTLNG
Ga0079215_102657762	3300006894	Agricultural Soil	MLLLGLLAAMMLAASPVLAWQPGLGEGSKFAKNYYPNSYFTYCEPDGDKYYGDRKASNNNWCDQY
Ga0079215_105553201	3300006894	Agricultural Soil	MLLLGMLAATMLVASPVLAHQGGPNHGNRYQQNYYPNSYFKYCEPDGAQYYGDQRANNNFWCDTYYTEYTKKTTNDQQYYYVH
Ga0079215_116863991	3300006894	Agricultural Soil	MVLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPNGYFKYCEPDGAQYYGDQKASNENVCDHRYIDGPGKPPY
Ga0079216_118594811	3300006918	Agricultural Soil	MLLLGLLAAMMLVASPVLGHQGGPTHGDKYSKNYYPNGFYKYCEPDGSNDYGDKKAATPKWCDGTPGYGNYYTECEKKSCNAKQW
Ga0105679_103206886	3300007790	Soil	MLLLAVLAAMMLVASPVSAFVWQPGPNEGNKYSKNYYPNGYFKYCEPDGAQYYGLNKASKNSWCDNYYKEYTKKTF
Ga0126307_110803712	3300009789	Serpentine Soil	LRKENELRRLMVLLGLLAAMMLVASPILAWQPGPNEGNKYSKNYYPTSYFNFCDQNGAQFYGTTKASKWCAQYYIEYQKKTFNGKKWYYVHVYYWWKTPDGN
Ga0126307_111765031	3300009789	Serpentine Soil	LLWEGEKELRRLMVLLGLLAAMMLAASPVLAHKDGPHHGNKYSKNYYPNGYFNYCEPDGAKYYGKKKI
Ga0126307_117178571	3300009789	Serpentine Soil	AMMLVASPVLAHKGGPTHGNKYSKNYYPNSYFKYCEPDGSNYYGKTKASKNSWCDKYYKEYKKKTFNGKTWYWVHVYYYWKTPDGKTHKWDNWY*
Ga0126307_117406491	3300009789	Serpentine Soil	LLWEGEKELRRLMVLLGLLAAMMLVASPVLAWQPGPGEGYKYSENYYPTSFYKYCEPDGSQYYGNTKAANPKWCYRTPSYGNYYTEYTKKTFNGKQWYWVHVYYQWKTPDGKTHK
Ga0126313_100535086	3300009840	Serpentine Soil	LGKEKELRKLMLLLGLLAAMMLAASPVLAHKGGPTHGNKYSKNYYPNGYFKYCEPDGSNYSQTKASKNSWCDKYYKEYTKKTFNGKN
Ga0126313_101543533	3300009840	Serpentine Soil	MLILGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTYYTEYQK
Ga0126313_107011491	3300009840	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPSPNEGSKYSKNYYPNTYFNYCEPDGSRYYGNTRASKDY
Ga0126313_114985961	3300009840	Serpentine Soil	LGKEKELRKLMLLLGLLAAMMLAASPVLAHKGGTTHGNKYSKNYYPNGYFNYCEPDGSNYSQTKASKN
Ga0126313_115067602	3300009840	Serpentine Soil	LLWEGEKELRRLMLLLGLLAAMMLVASPVLAWQPGPHEGNKYSKNYYPNSYFKYCEPDGSQYYGSKKASNTKWCN
Ga0126305_100742901	3300010036	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSFYKYCEPDGSQYYGNTKAANPKWCYRTASYGNYYTEYQQ
Ga0126305_102047521	3300010036	Serpentine Soil	LGKEKVLRRLMVLLGLLAAMMLAASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSQYYG
Ga0126305_105120442	3300010036	Serpentine Soil	MVLLGLLAAMMLVGSPVLAHQGGPHHGNKYSKNYYPNGYFNYCEPDGAKYYGKKKI
Ga0126305_106573621	3300010036	Serpentine Soil	MLLLALLAAMMLVASPVLAHKGGPTHGNKYSKNYYPNGYFKYCEPDGANYYGPTKASKNSWCDKYYKEYKKKT
Ga0126305_108560641	3300010036	Serpentine Soil	MVGTCFGKENELRRLMLLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSNYYGDKKASNTKWCN
Ga0126305_108684321	3300010036	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPNTYFNYCEKDGSRYYGNTRASK
Ga0126305_108817182	3300010036	Serpentine Soil	MLLLAVLAAMMLVASPVLAWQAGPNEGNKYWKYYYPTSYFKYCEPNGAKCYGDKKASKTKWCNH
Ga0126305_108872881	3300010036	Serpentine Soil	LGKEKKLRRLMLLLGLLAAMMLAASPVLAWQPGPNEGNKYSKNYYPTVYFNYCEPDGSRYYGDKRASNPKWCDHYYTEYKTKWTNGKKWYWVHVYYK
Ga0126305_109455402	3300010036	Serpentine Soil	MVLLGLLAAMMLVASPILAWQPGPNEGNKYSKNYYPTSYFNFCDQNGAQFYGTTKASKWCAQYYTEYQKKTF
Ga0126305_109493801	3300010036	Serpentine Soil	MLLLALLAATMLVASPVLAHMGGDHHGNRYQENWYPNNYFNYCEPDGAQYYGDQRANNDSWCDTYYREYTTKWNNGKKYYYVHVY
Ga0126304_102644232	3300010037	Serpentine Soil	MLILGLLAAMMLVASPVLAWQPGPNEGSKYWQNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTWYTEYQKK
Ga0126304_106119911	3300010037	Serpentine Soil	MVGTCFGKEIKLRRLMLLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSNYYGD
Ga0126304_106355152	3300010037	Serpentine Soil	MLLLGLLAAMMLAASPVLAHQGGPTHGNKYSKNYYPNSYFKYCEPDGSQYYGDNKASKNSWCDKYYKEY
Ga0126304_109772241	3300010037	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPNTYFNYCEKDGSRYYGNTRASKNYWC
Ga0126304_111469411	3300010037	Serpentine Soil	LGRRKRVLRKSMVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPNSFYKYCEPDGSQYYGNTKAANPKWCD
Ga0126315_100006821	3300010038	Serpentine Soil	MVLLGLLAATMLVASPVLAWQPGPHEGNKYSKNYYPTSYFKYCEPDGSQYYGNKKASNTK
Ga0126315_102294081	3300010038	Serpentine Soil	MVGTCFGKENKLRRLMLLLGLLAAMMLMASPVLAWQPGPGEGSKYWKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTWYTE
Ga0126315_102393781	3300010038	Serpentine Soil	MVLLGLLAAIMLVGSPVLAHQGGAHHGNKYSKNYYPNGYFNYCEPDGAKYYGKKKISNNNLCGQSYTK
Ga0126315_102989071	3300010038	Serpentine Soil	MLLLGLLAAMMLMASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSNYYGDTKASKNSWCDKYYKEY
Ga0126315_107387121	3300010038	Serpentine Soil	LRKEKKLRRLMLLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPTSYFNFCDKNGAQFYGTTKASKWCAQYYTEYQKKTFNGKKWYWVHVYYEWKTPDGK
Ga0126315_109532621	3300010038	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPNSFYKYCEPDGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKTFNGKQWYWVHTYYQW
Ga0126309_100520452	3300010039	Serpentine Soil	MLLLAVLAAMMLVASPVLAWQAGPGQGNKYSKNYYPTSYFKYCEPDGSQFLGTSKANKWCDHWYTDYKTKT
Ga0126309_102589971	3300010039	Serpentine Soil	MVGTCFGKENKLRRLMLLLGLLAAMMLMASPVLAWQPGPGEGSKYWKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTWYTEYQKKTFEGKKWYYVHVYYWW
Ga0126309_102671443	3300010039	Serpentine Soil	MLLLGLLAAMMLVASPVLAHKGGPTHGNKYSKNYYPNSYFKYCEPDGAKYYGPTKASKWCKKYYTEYQKKTFNGKNWYYVHVYY
Ga0126309_105005952	3300010039	Serpentine Soil	MLLLGLLAAMMLVASPVLAHQGGPTHGDKYSKNYYPNGYFKYCEPDGSNYYGDTKASKNSWCDKYYKEYNKKT
Ga0126309_111677811	3300010039	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSENYYPTSFYKYCEPDGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKK
Ga0126309_111691561	3300010039	Serpentine Soil	MVGTCFGKEKKLRKLMLLLGVLAAMMLMASPVLAWQPGSGEGNKYSKNYYPNTYFNYCEPDGSRYYGDKRATNGKWCDHYYTEYQKKTFECKKYYYVHVY
Ga0126308_100197243	3300010040	Serpentine Soil	MLLLGLLAAMMLMASPVLAWQAGPNEGNKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTRSVAENPP*
Ga0126308_100359295	3300010040	Serpentine Soil	MLLLGLLAAMMLAASPVLAHKGGPTHGNKYSKNYYPNGYFNYCEPDGSNYSQTKASKNSWCDKYYKEYNKKTFNGKNWYWVHVYYHWKTPDGKTHKWDDWYYCAYHKYDDPHSKKPYF
Ga0126308_100522625	3300010040	Serpentine Soil	LRRLMLLLAVLAAMMLMASPVLAWQPGPGEGNKYPRNYYPTGTYFKYCEPEGSQFLGTTKAN
Ga0126308_100861491	3300010040	Serpentine Soil	MVLLGLLAAMMLVGSPVLAWQPGPNEGSKYSKNYYPNTYFNYCEADGSRYYGDTRASKSFRQ*
Ga0126308_101355462	3300010040	Serpentine Soil	MLLLGLLAATMLVATPVLAHKGGPTHGNKYSKNYYPTSYFKYCEPDGSNYYGDNKASKNSWCDKY
Ga0126308_102299891	3300010040	Serpentine Soil	LEKEKMLRRLMLLLGLLAAMMLMASPVLAWQPGPHEGSKYWQNYYPTSYFKYCEPDGSQYYGKTKASNTKWCNTWYTEYQKKTFNGDKWYYVHVYYWWKTPDGK
Ga0126308_102614043	3300010040	Serpentine Soil	LRRLILLLAVLAAMMLVASPVLAWQAGPGQGNKYSKNYYPTSYYKYCDPSGSQFLGTSRSNSWCDQWYTTYKTKTF
Ga0126308_107439331	3300010040	Serpentine Soil	LGKEKKLRRLMLLLGLLAAMMLMASPVLAWQPGPHEGNKYSKNYYPTVYFKYCEPDGSRYYGDKRASNPKWCDHYYTEYKTKWTNGKKWYWV
Ga0126308_108412582	3300010040	Serpentine Soil	LGKEKELRRLMVLLGLLAAMMLVASPVLAHKGGPHHGNKYSKNYYPNGYFNYCEPDGAKY
Ga0126308_109818531	3300010040	Serpentine Soil	MLLLGLLAAMMLVASPVLAHQGGPTHGNKYSKNYYPNGYFKYCEPDGSNYYGDNKASKNSWCDKYYKEYKKKTFNGKKWYWVHVYYYWKT
Ga0126308_112720301	3300010040	Serpentine Soil	MLILGLLAAMMLVASPVLAWQPGPHEGSKYWQNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTW
Ga0126308_112981351	3300010040	Serpentine Soil	MLLLGLLAAMMLAASPVLAWQPGPGEGNKYSKNYYSTSYFKYCEPDGSQYYGDKKASNTKWCNKYYTEYQKKTFNGKKWYYVHVYYWWKT
Ga0126308_113152911	3300010040	Serpentine Soil	MLLLALLAAMMLAASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSQYYGDNKASKNSWCDKYYKEYKKKTFNGK
Ga0126312_101027474	3300010041	Serpentine Soil	MEKELRRLMVLLGLLAAMMLVASPVLAHKGGPTHGNKYSKNYYPNSFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKTLNGK
Ga0126312_102940282	3300010041	Serpentine Soil	MLLLGLLAAMMLMAAPVLAWQPGPNEGSKYSKNYYPTSYFKYCEPDGSQYYGDKKA
Ga0126312_103770502	3300010041	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPNTYFKYCEADGSRYYGNTRASKDYWCYKYYTEYHKK
Ga0126312_106105421	3300010041	Serpentine Soil	MLLLGLLAAMMLVASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSNYYGKKKASKWCDKYYKEYTKK
Ga0126314_105043841	3300010042	Serpentine Soil	MVLLGLLAAIMLVGSPVLAHQGGAHHGNKYSKNYYPNGYFNYCEPDGAKYYGKKKISND
Ga0126314_109064941	3300010042	Serpentine Soil	VLAWQPGPGEGSKYSKNYYPNSYFKYCEPNGSNYYGDNKASNTKWCNTWYTEYQKKTFNG
Ga0126314_109410041	3300010042	Serpentine Soil	MVLLGLLAAMMLVASPVLAHKGGATHGNKYSKNYYPNSFYKYCEPGGSQYYGNTKAANPKWCYRT
Ga0126314_110174791	3300010042	Serpentine Soil	LYWEGEKELRRLMLLLGLLAAMMLVASPVLAHQGGPHHGNKYSKNYYPNGYFKYCEPDGSNYSETKASKNSWCDKYYKEYKKKTFNGKNWYWVHVYYKWKTPDGKTHTW
Ga0126314_112960931	3300010042	Serpentine Soil	LGKENELRRLMLLLALLAAMMLVASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSQTYSKAKASKRCAKYYTDYKTKWTNG
Ga0126310_100846061	3300010044	Serpentine Soil	MLLLGLLAAMMLMASPVLAWQPGPGEGSKYSKNYYPNSYFKYCEPDGSQYYGNKKASNTKWCDHWYTEYQKKTFEGKKWYWVHVY
Ga0126310_104511852	3300010044	Serpentine Soil	LEKEKMLRRLMLLLGLLAAMMLMASPVLAWQPGPHEGSKYWQNYYPTSYFKYCEPDGSQYYGKTKASNTKWCNTWYTEYQKKTFNGDKWYYVHVYYWWKTPDGKS
Ga0126310_107860471	3300010044	Serpentine Soil	MVGTCFGKEIKLRRLMLLLGLLAAMMLMASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSNYYGDKKAS
Ga0126310_109360401	3300010044	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSQNYYPTSFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKTLTGKQWYWVHVYYQ
Ga0126310_112454471	3300010044	Serpentine Soil	LGKERELRKLMLLLGLLAAMMLVASPVLAHQDGPHHGDKYWKNYYPNTYFKYCEKNGTKFYGKTKASKWCAQYYTEYQKKTFEGKKWYWVHVYDEWKTPDGKWHKWDDWYYCQYHK
Ga0126311_106823202	3300010045	Serpentine Soil	MLLLGLLAAMMLAASPVLAWQPGPGEGNKYSKNYYSTSYFKYCEPDGSQYYGDKKASNTKWCNKYYTEYQKKTFNGKKWYYVHVYYWWKTPDGNTHKWNDWYYCQY
Ga0126311_108242281	3300010045	Serpentine Soil	MVGTCFGKEIKLRRLMLLLGLLAAMMLMASPVLAWQPGPGEGNKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTYY
Ga0126311_110954392	3300010045	Serpentine Soil	MVGTCFGKENKLRKLMLLLGLFAAMMLMASPVLAWQPGPGEGSKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCDHWYTEYQKKTFEGKKWYYVHVYY
Ga0126311_111855661	3300010045	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTSFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKT
Ga0126311_112265081	3300010045	Serpentine Soil	MVLLGFLAAMMLVASPVLAHKGGATHGNKYSKNYYPNSFYKYCEPGGSNYYGNTKAANPKWCYRTPSYGNYYTEYTKKTLNGKKWYYVHVYYQWKTPDGKTHKSDPWYYCAYHKYND
Ga0126311_114842691	3300010045	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGYKHSQNSCANGLDKYYDTGGSQYYGN
Ga0126311_116140141	3300010045	Serpentine Soil	MEGSCFGKGENQLRRLMLLLALLAAMMLVASPVLAHKGGPHHGNKYWKNYYPTSYFKYCEPDGANYYGPTKASKNSWCDKYYKEYKKKTFNGKNWYWVHVYY
Ga0126311_116533531	3300010045	Serpentine Soil	LGKEKKLRRLMLLLGLLAAMMLMASPVLAWQPGPHEGNKYSKNYYPTVYFKYCEPDGSRYYGDKRASNPKWCDHYYTEYKTKWTNGKK
Ga0126323_10887331	3300010137	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGSKYSKNYYPPSYFKYCEPDGSQYYGDKKASNTKWCDHWYTEYQKKTFEGKKWYWVHVYYSWKTPDGKTHEWDDWYYC
Ga0126306_100412414	3300010166	Serpentine Soil	MLLLGLLAAMMLMASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSNYYGDTKASKNSWCDKYYKEYKKKTFEGKN
Ga0126306_102709042	3300010166	Serpentine Soil	MVLLGLLAAMMLVASPVLAWQPGPNEGNKYSKNYYPNTYFNYCEKDGSRYYGNTRASKNYWCYKYY
Ga0150985_1157523841	3300012212	Avena Fatua Rhizosphere	MLLLGLLAAMMLVASPVLAWQPGPGEGSKYSKNYYPTSYFKYCEPDGSQYYGKKASNNSWCDTYYKEY
Ga0150984_1078529762	3300012469	Avena Fatua Rhizosphere	MLLLGLLAAMMLVASPVLAWQPGPGEGSKYSKNYYPTSYFKYCEPDGSQYYGDKKASNNSWCDKYYKEYQKKAFQG*
Ga0182000_100083781	3300014487	Soil	MVLLGLLAAMMLMASPVLAWQPGPNEGSKYSKNYYPNTYFNYCEGDGSRYYGDTRASKNYWCYKYYTQYQKKTLN
Ga0182000_103891531	3300014487	Soil	MLLLGLLAAMMLMASPVLAHKDGPHHGDKYWKNYYPTSYFKYCEPDGSNYYGKTKASKWCDKYYKEYTKKTFNGKK
Ga0182001_105047462	3300014488	Soil	VRTCFGKEKELRKLMVLLGLLAAMMLAASPVLAHKGGPTHGDKYSKNYYPNSYFKYCEPAGSKYYGDNKASKNSWCDKYYKEYNKKTFNGKKWYWVHVYYHWKTPDGNTHKWDDWYYCAYHKYDD
Ga0190265_119136751	3300018422	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPNSFYKYCEPDGSQYYGNKKAANPKWCDR
Ga0190269_106017001	3300018465	Soil	LLAAMMLVASPVLAWQPGPGEGNKYSQNYYPTSFYKYCEPDGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKTFKNKQWYWVHVYYHWRTPDG
Ga0190269_108277031	3300018465	Soil	MLLLGLLAATMLVASPVLAHKAGPTHGNKYSKNYYPTSYFKYCEPDGSQYYGNKKASNTKWCDHWYTEYQKKTFNGKTWYYVHVYY
Ga0190268_107814441	3300018466	Soil	LRRLMLLLGLLAVMMLVASPVLAFVWQPGPNEGNKYSKNYYPNGYFKYCEPDGAKYYDLNKASKNSWCDNYYKEYTKKKFHGKRWYYVHVYYKWKTPDGN
Ga0190268_115271291	3300018466	Soil	MLLLGLLAAMMLLASPVLAHQGGATHGDKYSKNYYPNGFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYTKKTVNGKQWYYVHVYYQWKTPDGKTHKSDPWYYCAFHKYN
Ga0190268_120005371	3300018466	Soil	MLLLALLAATMLVASPVLAHQGGRTHGNKYSKNYYPNSYFKYCEPDGAKYYGDTKASKNSWCDKYYKEYTKKTFHGKQWYYVHVYYKWKTPDG
Ga0190268_121683191	3300018466	Soil	MLLLAVLAAMMLVASPVLAWQPGPGEGSKYSKNYYPTSYFKYCEPDGSQYYGDKKASNSSWCDKYYKEYQKKSFQGKQWYWVHVYYTWKTPDGKPHQWDDWYYCQYH
Ga0190268_121836641	3300018466	Soil	LLAAMMLVASPVLAHQGGPHHGNKYSKNYYPNSYFKYCEPDGSQTYSKAKASKRCAKYYTDY
Ga0190270_108739361	3300018469	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSENYYPNGFFKYCEPDGSQYYGDKKAANPKWCDRTPGYGNYYTEY
Ga0190270_115423201	3300018469	Soil	LLAAMMLAASPVLAHKGGPHHGDKYSKNYYPNTYFNYCEPDGSRYYGNTRASKNYWCYKYYTEYQKKSTNGKKWYWVHVYYKWRTPDGIRHTQD
Ga0190274_122860282	3300018476	Soil	LRKLMLLLGLLAAMMLAASPVLAHQGGPHHGNKYSKNYYPNGYFKYCEPDGSKYYGQKKISNNN
Ga0190274_124397512	3300018476	Soil	MMLVASPVLAWQPGPGEGNKYSQNYYPNGFFKYCEPDGSNYYGNKKAANPKWCDRTPGYGNYYTEYQKKTLNGKQWYYVHVYYHWKTPDGSSPEASVISSKKLHPSLSAPRA
Ga0190274_131728801	3300018476	Soil	MLLLALLAATMLVASPVLAHPGGPTHGNKYSKNYYPTSYFKYCEPDGAKYYGNKKASNNSWCDKYYKKYTKKTFHGKQWYYVHVYYKWKTPGGQRHT
Ga0190267_106120372	3300019767	Soil	MLLLAVLAAMMLVASPALAWQPGPGEGSKYSKNYYPNSYFKYCEPDGAKYYGDKKASNNSWCDKYYKEYHKKTFHGKKWYWV
Ga0214467_10237971	3300027075	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSENYYPNGFYKYCEPDGSQYYGNKKAANPKWCDRTPGYGNYYTEYQKKTLNGKQWYYVHVYYKWKTPDGKTH
Ga0209462_101475001	3300027761	Agave	LLAAMMLVASPVLAWQPGPGEGSKYSKNYYPNGFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKT
Ga0272482_100944991	3300028578	Soil	MLLLALLAAMMLVASPVLAHQGGATHGDKYSKNYYPNGFYKYCEPDGSNYYGDKKAANPKWCDRTPGYGNYYTEYQKKSFNGKKW
Ga0307319_102932831	3300028722	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSQNYYPTSFYKYCEPGGSKYYGNTKAANPRWCDRTPGYGNYYTEYQKKTFKNKQWYWVHVYYHWRTPDGTSHKSEP
Ga0268240_100296971	3300030496	Soil	LRRLMLLLGLLAAMMLAASPVLAWQPGPNEGNKYSKNYYPNTYFKYCEPDGSNYYGDTKASSTKWCKKYYTEYQKKTFEGKQWYWVHVYYW
Ga0268242_10644071	3300030513	Soil	LLAAMMLVASPVLAWQPGPGEGNKYSKNYYPNSFYKYCEPGGSQYYGNTKAANPKWCYRT
Ga0308206_11263761	3300030903	Soil	LLAAMMLVASPVLAWQPGPGEGNKYSQNYYPTSFYKYCEPGGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKTYKNRQWYRVHVYFKWRTPDNIVHKRK
Ga0299913_107432352	3300031229	Soil	MLLLGLLAAMMLAASPVLAHQGGPTHGDKYSKNYYPTSYFKYCEPDGSQYYGDNKASKNSWCDK
Ga0307405_101034802	3300031731	Rhizosphere	MLLLGLLAAMMLMASPVLAHQGGPTHGNKYSKNYYPTSYFKYCEPDGSQYYGDKKASNTKWCNTWYTEYQKKTFEGKKWYYVHVYYWWKTPDGKSHKWDDWY
Ga0307413_101784563	3300031824	Rhizosphere	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPNSFYKYCEPDGSQYYGNKKAANPKWCYRTPGYGNYYTEYTKKTFHG
Ga0307413_120252091	3300031824	Rhizosphere	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSENYYPNSFYKYCEPDGSNYYGNTKAANPKWCYRTPGYGNYYTEYQKKTFNGKKWYWVHVYYQW
Ga0307410_120728831	3300031852	Rhizosphere	MLLLGLLAAMMLAASPVLAHKGGPTHGNKYSKNYYPNGYFNYCEPDGSNYSQTKASKNSWCDKYYKEYNKKTFNGKNWYWVHVYYHWKTPDGKTHKWDDWYYCAYHKYDD
Ga0307407_103379152	3300031903	Rhizosphere	LRRLMLLLGLLAAMMLVASPVLAWQAGPGEGNKYSKNYYPNSYFKYCEPDGSNYYGDNKASNTRWCDHYYTEYHKK
Ga0307407_112273121	3300031903	Rhizosphere	LLAAMMLVASPVLAWQPSPNEGSKYSKNYYPNTYFNYCEPDGSRYYGNTRASKDYWCYKY
Ga0307412_108166191	3300031911	Rhizosphere	LLAAMMLVASPVLAWQPSPNEGNKYSKNYYPNTYFNYCEKDGSRYYGNTRASKNYWCYNYYTEYQKKSTNGKK
Ga0307409_1002752411	3300031995	Rhizosphere	MVLLGLLAAMMLVASPVLAHQGGPHHGNKYSKKYYPNGYFNYCEPDGAKYYGKKKISNNNLCGQSYT
Ga0307409_1004849741	3300031995	Rhizosphere	MLLLALLAATMLVASPVLAHMGGDHHGNRYQENWYPNNYFNYCEPDGAQYYGDQRANNDSWCDTYYREYTTKWNNGKKYYYVHVYYEWRTPDRN
Ga0307409_1022205621	3300031995	Rhizosphere	MVLLGLLAAMMLVASPVLAHQDGPHHGNKYSKNYYPNGYFNYCEPDGAKYYGKKKISNNNLCGQSYT
Ga0307416_1011667311	3300032002	Rhizosphere	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSNNYYPNGFFKYCEPDGSQYYGNTKAANPKWCYRTPGYGN
Ga0307411_109857271	3300032005	Rhizosphere	MLLLGLLAAMMLAASPVLAHKGGPTHGDKYSKNYYPNGYFKYCEPDGSNYSQTKASKNSWCDKYYKEYNKKTVNGKKWYYVHVY
Ga0326721_102314911	3300032080	Soil	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSQNYYPTSFYKYCEPDGSQYYGNTKAANPKWCYRTPGYGNYYTEYQKKMFKGKQWYYVH
Ga0307415_1001478053	3300032126	Rhizosphere	MVLLGLLAAMMLVASPVLAWQPGPGEGNKYSENYYPNSFYKYCEPDGSNYYGNTKAANPKWCYRTPGYGNYYTEYQKKTFN
Ga0268251_104065581	3300032159	Agave	MLLLGLLAAMMLVASPVLAWQPGPGEGNKYSKNYYPTGSYFTYCEPDGSKYYGDQKASNTKWCNHWYTEFQKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070945

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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