Metagenome / Metatranscriptome Family F071048

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071048
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	109 residues
Representative Sequence	IADRHGLALEVGRTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG
Number of Associated Samples	100
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.46 %
% of genes near scaffold ends (potentially truncated)	97.54 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.131 % of family members)
Environment Ontology (ENVO)	Unclassified (39.344 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.738 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.69% β-sheet: 3.05% Coil/Unstructured: 57.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00730	HhH-GPD	9.84
PF01243	Putative_PNPOx	9.84
PF00589	Phage_integrase	3.28
PF04945	YHS	1.64
PF08803	ydhR	1.64
PF00085	Thioredoxin	1.64
PF11253	DUF3052	0.82
PF03795	YCII	0.82
PF12867	DinB_2	0.82
PF01345	DUF11	0.82
PF03372	Exo_endo_phos	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	9.84
COG0177	Endonuclease III	Replication, recombination and repair [L]	9.84
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	9.84
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	9.84
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	9.84
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.82

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	76.23 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.74 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	76.23 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.74 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	76.23 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	76.23 %
Streptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae	0.82 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	76.23 %
Yaniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Yaniella	0.82 %
Streptococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	0.82 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	76.23 %
Yaniella halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Yaniella → Yaniella halotolerans	0.82 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.82 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005176\|Ga0066679_10868257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300005177\|Ga0066690_10333985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1027	Open in IMG/M
3300005179\|Ga0066684_10084560	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300005181\|Ga0066678_10906100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300005295\|Ga0065707_11029535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300005406\|Ga0070703_10007280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3106	Open in IMG/M
3300005406\|Ga0070703_10374695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300005445\|Ga0070708_100060340	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300005445\|Ga0070708_101049608	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005445\|Ga0070708_101361092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300005445\|Ga0070708_101960565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300005447\|Ga0066689_10179634	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005451\|Ga0066681_10149507	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300005468\|Ga0070707_100305847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300005536\|Ga0070697_101726247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Yaniella → Yaniella halotolerans	560	Open in IMG/M
3300005549\|Ga0070704_100485693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300005549\|Ga0070704_101783250	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005553\|Ga0066695_10159009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1409	Open in IMG/M
3300005556\|Ga0066707_10026282	All Organisms → cellular organisms → Bacteria	3164	Open in IMG/M
3300005557\|Ga0066704_10367564	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005558\|Ga0066698_10138817	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300005569\|Ga0066705_10599324	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005569\|Ga0066705_10677228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300005575\|Ga0066702_10517450	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005598\|Ga0066706_10819898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	732	Open in IMG/M
3300006796\|Ga0066665_11167024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300006796\|Ga0066665_11650301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	506	Open in IMG/M
3300006800\|Ga0066660_10358326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1188	Open in IMG/M
3300006846\|Ga0075430_101136005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300006871\|Ga0075434_102013397	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300007004\|Ga0079218_10632566	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300007265\|Ga0099794_10710410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300009012\|Ga0066710_101773029	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300009012\|Ga0066710_104301796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300009012\|Ga0066710_104516895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300009089\|Ga0099828_10086653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2684	Open in IMG/M
3300009090\|Ga0099827_10326488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1302	Open in IMG/M
3300009148\|Ga0105243_12801546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300009176\|Ga0105242_10349110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1366	Open in IMG/M
3300010119\|Ga0127452_1037083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300010320\|Ga0134109_10461956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300010323\|Ga0134086_10324333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300010323\|Ga0134086_10469445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300010326\|Ga0134065_10194129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	732	Open in IMG/M
3300010333\|Ga0134080_10538933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300010336\|Ga0134071_10334573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300010373\|Ga0134128_11876750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300012003\|Ga0120163_1081801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300012199\|Ga0137383_10194276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1487	Open in IMG/M
3300012203\|Ga0137399_10005173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7119	Open in IMG/M
3300012203\|Ga0137399_11404973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300012203\|Ga0137399_11585683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300012205\|Ga0137362_10273838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1460	Open in IMG/M
3300012207\|Ga0137381_10248637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1545	Open in IMG/M
3300012207\|Ga0137381_11625966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012208\|Ga0137376_10025988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4580	Open in IMG/M
3300012208\|Ga0137376_10100610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2448	Open in IMG/M
3300012208\|Ga0137376_11047356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	698	Open in IMG/M
3300012211\|Ga0137377_11726264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300012211\|Ga0137377_11739955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300012211\|Ga0137377_11810996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300012354\|Ga0137366_10845789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300012361\|Ga0137360_11739455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300012532\|Ga0137373_10746418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300012918\|Ga0137396_10409299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1005	Open in IMG/M
3300012922\|Ga0137394_10276609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1435	Open in IMG/M
3300012972\|Ga0134077_10089302	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300012975\|Ga0134110_10396063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300014150\|Ga0134081_10412930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300015358\|Ga0134089_10464289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300015359\|Ga0134085_10358983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	649	Open in IMG/M
3300017654\|Ga0134069_1181198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300018429\|Ga0190272_13267652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300018431\|Ga0066655_11326997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300018468\|Ga0066662_11104630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300018482\|Ga0066669_11912820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300018482\|Ga0066669_12383325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300018482\|Ga0066669_12392988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300019279\|Ga0184642_1483236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300019879\|Ga0193723_1101741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300019885\|Ga0193747_1000704	All Organisms → cellular organisms → Bacteria	10240	Open in IMG/M
3300020022\|Ga0193733_1014532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2214	Open in IMG/M
3300021080\|Ga0210382_10279113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300021344\|Ga0193719_10165947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300022756\|Ga0222622_10371852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1001	Open in IMG/M
3300025885\|Ga0207653_10321141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300025910\|Ga0207684_10864138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300025981\|Ga0207640_10823226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	806	Open in IMG/M
3300026306\|Ga0209468_1158905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300026312\|Ga0209153_1253557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300026324\|Ga0209470_1147680	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300026332\|Ga0209803_1058073	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300026333\|Ga0209158_1293648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300026343\|Ga0209159_1250309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300026523\|Ga0209808_1167925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	807	Open in IMG/M
3300026528\|Ga0209378_1047726	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300026548\|Ga0209161_10477680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300026550\|Ga0209474_10579216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300027633\|Ga0208988_1141124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300027639\|Ga0209387_1033664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1060	Open in IMG/M
3300027655\|Ga0209388_1064353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300027846\|Ga0209180_10584560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300027873\|Ga0209814_10288647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300027875\|Ga0209283_10193647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1350	Open in IMG/M
3300028711\|Ga0307293_10113063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	863	Open in IMG/M
3300028718\|Ga0307307_10134322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300028784\|Ga0307282_10020891	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300028787\|Ga0307323_10259014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300028791\|Ga0307290_10315150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300028796\|Ga0307287_10222645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	715	Open in IMG/M
3300028807\|Ga0307305_10341194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300028811\|Ga0307292_10512158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300028814\|Ga0307302_10619702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300028814\|Ga0307302_10640709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300028819\|Ga0307296_10774420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300028828\|Ga0307312_10448474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300028828\|Ga0307312_10938839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300028878\|Ga0307278_10422590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300028880\|Ga0307300_10277185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300031720\|Ga0307469_10018717	All Organisms → cellular organisms → Bacteria	3695	Open in IMG/M
3300031720\|Ga0307469_11749646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300031820\|Ga0307473_11268816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.08%
Host-Associated	Host-Associated	4.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.62%
Plants	Host-Associated → Plants	4.92%
Aquatic	Environmental → Aquatic	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.10%
Freshwater	Environmental → Aquatic → Freshwater	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.97%
Loam	Environmental → Terrestrial → Soil → Loam	10.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066679_108682572	3300005176	Soil	HVDIASRYSLALVPDQTMVPHWAIVPTQCPGLLDIARIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEALTWTKRLQLWLARALLTGIPSSDLSGPDVETGQAFDPKTIARR*
Ga0066690_103339852	3300005177	Soil	HWAIVPTQCPGLLDIARIAQEAGQEDDMFTEDDRRKLNRVYEHLEAYEPLTWMKRLQLWLARALLTGIPSADLSGPDVETAQPFDPKTIARR*
Ga0066684_100845603	3300005179	Soil	EHEAGPAMPPSDALYAASAQLHAEIASRHGLALRVGTTVLPHHAIVPTECPGTLDLDRIVREARQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG*
Ga0066678_109061001	3300005181	Soil	YEASARLHADIAARYGIALSPGETLVPHSAIVPTQCPGLLDIARIAHQAAEEDDMFTDDDRRKLNRVYDHLEAYEPLVWVSRLQRWLAIAIRSVFPNADLSGPDVETGQAYRTETLSRR*
Ga0065707_110295351	3300005295	Switchgrass Rhizosphere	GTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLARAIRSVFPNADVSGPDVESGQPFKG*
Ga0070703_100072805	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG*
Ga0070703_103746951	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	PRDALYAASARLHLEIAHRHGLDLAVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLARAIRSVFPNADVSGPDVESGQPFKG*
Ga0070708_1000603401	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LYAASARLHLEIAHRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG*
Ga0070708_1010496082	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GPAMPPTDALYVASAQLHAEIASRFGLALNVGTTVLPHHAIVPTECPGTLDLDRIVRDALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALASGLTSADLSGPDVESGQAFDAKTASRR*
Ga0070708_1013610921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLPHHAIVPTECPGTLDLDRIVREAFEEDDMFTDEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPSADLSGPDVETGQPFKGGA*
Ga0070708_1019605651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTDALYAASAQLHRAIADRHGLALEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPSADLSGPDVETGQPFKGGA*
Ga0066689_101796341	3300005447	Soil	YAASARLHAEIASRYSLDLHVGATVLPHRAIVPTQCPGTLDLERIVRQALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTARLQRWLAKEIRSVFAHADTSGPDVETGQPFTD*
Ga0066681_101495071	3300005451	Soil	ASARLHADIASRHGLALNVGTTVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0070707_1003058474	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AHRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG*
Ga0070697_1017262471	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTDALDIASARLHADIASRHALALEVGTTVLPHHAIVATECPGTLGLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWVAKALSSGLPEADLSGPDVESGQA
Ga0070704_1004856931	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ASLHLEIAHRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG*
Ga0070704_1017832502	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWVAKALSSGLPEADLSGPDVESGQAFDAKRAARR*
Ga0066695_101590093	3300005553	Soil	HAIVPTECPGTLDLDRIVREARQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG*
Ga0066707_100262823	3300005556	Soil	PPSDALYAASAQLHAEIASRHGLALRVGTTVLPHHAIVPTECPGTLDLDRIVREARQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG*
Ga0066704_103675642	3300005557	Soil	GTTVLPHHAIVPTECPGTLDLDRIVSQAQEVLKEDDMFTDADRAKLDRIYQHLEAYEPLTWTKRLQQWLARAFRTQFPEADLGGPDVETGQPFKG*
Ga0066698_101388173	3300005558	Soil	HHAIVPTECPGTLDLERIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0066705_105993242	3300005569	Soil	IADRHGLALEVGRTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0066705_106772281	3300005569	Soil	SLALVPDQTMVPHWAIVPTQCPGLLDIARIAQEAGQEDDMFTEDDRRKLNRVYEHLEAYEPLTWMKRLQLWLARALLTGIPSADLSGPDVETAQPFDPKTIARR*
Ga0066702_105174502	3300005575	Soil	DALYSASARLHADIASRYSLALNVGTSVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALASGLPTADLSGPDVESGQAFDAKTVSRR*
Ga0066706_108198981	3300005598	Soil	ECPGTLDLDRIVSQAEEALKEDDMFTEEDRRKLDRVYQHLEAYEPLTWTKRLQQWLARAFRTQFPEADLGGPDVETGQPFKG*
Ga0066665_111670242	3300006796	Soil	HADIAVRHGLDLAVGTTVLPHRAIVPTECPGTLDLDRIVRQATEEDDMFTDEDRRMLRRVYNHLEAYEPMWWTTRLQQWLAKAFRSVFPDADLSGPDVQSGQSYKG*
Ga0066665_116503011	3300006796	Soil	DALYAASARLHADIASRYSLALAVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKALGSGLPNADLSGPDVETGQPFDARTASRR*
Ga0066660_103583263	3300006800	Soil	YGLALQVGTTVLPHHAIVPTECPGTLDLERIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPTADLSGPDVETGQAFDARTASRR*
Ga0075430_1011360051	3300006846	Populus Rhizosphere	DALYAASVRLHLEIAERHDLDLAASGTVLPHRAIVPTECPGSLDLDRIVREALQEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSIFPNADLSGPDVDSGQPFKG*
Ga0075434_1020133972	3300006871	Populus Rhizosphere	VLPHHAIVPTECPGTLDLQRIVREAKEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG*
Ga0079218_106325662	3300007004	Agricultural Soil	EVGNTVLPHRAIVPTECPGTLDLERIVREATEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSIFPNADLSGPDVETNQPFKG*
Ga0099794_107104102	3300007265	Vadose Zone Soil	PPSDALYAASARLHADIASRYGLALEVGTTVLPHHAIVPTECPGTLDLDRIVRQALEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLATAIRSIFPDADLSGPDVESGQTFKG*
Ga0066710_1017730291	3300009012	Grasslands Soil	PSDPLYAASARLHAEIASRYSLDLHVGATVLPHRAIVPTQCPGTLDLERIVRQALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTARLQRWLAKEIRSVFAHADTSGPDVETGQPFTD
Ga0066710_1043017962	3300009012	Grasslands Soil	LVPHWAIVPTQCPGLLDITRIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEALTWTKRLQLWLARALLTGIPSSDLSGPDVETGQAFDPKTIARR
Ga0066710_1045168951	3300009012	Grasslands Soil	PHWAIVPTQCPGLLDITRIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEPLAWTKRLQLWLARALLTGIPSSDLSGPDVETGQAFDPKTIARR
Ga0099828_100866534	3300009089	Vadose Zone Soil	FELMVRNPVFGIGPDHFSVVALSLKKKHEAGPGMPPTDALYAASARLHADIASRHSLALAVGTTVLPHHAIVPTECPGTLDLDRIVREAQEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLAKAFASGLPNADLSGPEVESGQAFDAKTASRR*
Ga0099827_103264881	3300009090	Vadose Zone Soil	MPPSDALYAASARLHADIASRYGLALEVGTTVLPHHAIVPTECPGTLDLGRIVREAMEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFGGGLPNADLSGPDVETGQPFDAKTASRR*
Ga0105243_128015461	3300009148	Miscanthus Rhizosphere	PHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALMTGLPSADLSGPDVETGEAFEERTVSRR*
Ga0105242_103491103	3300009176	Miscanthus Rhizosphere	VLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLARAIRSVFPDADVSGPDVESGQPFKG*
Ga0127452_10370831	3300010119	Grasslands Soil	HEAGPAMAPTDALYAASAELHADIAVRHGLDLAVGTTVLPHRAIVPTECPGTLDVDRIVREATEEDDMFTDEDRRMLRRVYDHLEAYEPMVWTTRLQQWLAKAFRSVFPDADLSGPDVQSGQSYKG*
Ga0134109_104619561	3300010320	Grasslands Soil	DALYEASARLHADIAARYGIALSPGETLVPHSAIVPTQCPGLLDIARIAHQAAEEDDMFTDDDRRKLNRVYDHLEAYEPLVWVSRLQRWLAIAIRSVFPNADLSGPDVETGQAYRAETLSRR*
Ga0134086_103243331	3300010323	Grasslands Soil	SDALYAASAGLHADIATRYGLALEVGRTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFGSGLPNADLSGPDVETGQPFDAKTASRR*
Ga0134086_104694451	3300010323	Grasslands Soil	AMPPTDALYTASARLHADIASRHGLAINVGTTVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0134065_101941291	3300010326	Grasslands Soil	SARLHVDIASRYSLVLVPDQTMVPHWAIVPTQCPGLLDIARIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEALTWTKRLQLWLARALLTGIPSSDLSGPDVETGQAFDPKTIARR*
Ga0134080_105389331	3300010333	Grasslands Soil	ALEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0134071_103345731	3300010336	Grasslands Soil	PAMPPTDALYAASARLHADIAGRHSLALAVGTTVLPHHAIVPTECPGTLDLDRIVREAQEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFGSGLPNADLSGPDVETGQPFDAKTASRR*
Ga0134128_118767501	3300010373	Terrestrial Soil	ALYAASARLHADIGTRYALPLEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWVAKALSSGLPEADLSGPDVESGQAFDAKTAARR*
Ga0120163_10818011	3300012003	Permafrost	LYAASARLHADIASRHGFELQVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSSGLPNADLSGPDVESGQAFDAKTVSRR
Ga0137383_101942761	3300012199	Vadose Zone Soil	RHVLALEVGRTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0137399_1000517310	3300012203	Vadose Zone Soil	HADIASRYGLALEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKAVGTGLPNADLSGPDVETGQAFDAKTASRR*
Ga0137399_114049731	3300012203	Vadose Zone Soil	ANRHGLDLSVGTTVLPHHAIVPTECPGTLDLDRIVREAEQEDDMFTDEDRKMLKRVYDHLEAYEPLVWTTRLQRWLSRAIRSVFPDADISGPDVESGQPFKG*
Ga0137399_115856831	3300012203	Vadose Zone Soil	RLHADIASRYGLALKVGTTVLPHHAIVPTECPGTLDLERIVRQAEEEDDMFTEEDRRMLQRVYDHLEAYEPLVWTTRLQRWLARAIRSVFPNADISGPDVESGQPFKS*
Ga0137362_102738381	3300012205	Vadose Zone Soil	DRHGLALEVGKTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0137381_102486373	3300012207	Vadose Zone Soil	YTASAQLHREIADRHGLALEVGRTVLPHHAIVPTECPGTLDLGRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0137381_116259661	3300012207	Vadose Zone Soil	SARLHADIASRHGLALEVGATVLPHYAIVPTECPGTLDLDRIVRQALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTRRLQLWVAKALSTGLPTADLSGPDVDTGQAFEARTASRR*
Ga0137376_100259886	3300012208	Vadose Zone Soil	GPAMPPTDALYVASAQLHREIADRHVLALEVGKTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0137376_101006101	3300012208	Vadose Zone Soil	LHAEIASRHGLTLEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGLPTADLSGPDVETGQAFDAKTASRR*
Ga0137376_110473561	3300012208	Vadose Zone Soil	ALKVGTTVLPHHAIVPTECPGTLDLDRIVRQALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKAVGTGLPSADLSGPDVETGQPFDAKTASRR*
Ga0137377_117262641	3300012211	Vadose Zone Soil	MPPSDALYAASAGLHAEIASRYGLALAVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTTRLQLWLARALMTGVPTADLSGLDVETWQAFDAKTASRR*
Ga0137377_117399552	3300012211	Vadose Zone Soil	DRHVLALEVGKTVLPHHAIVPTECPGTLDLERIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPDADVSGPDVETGQPFKG*
Ga0137377_118109961	3300012211	Vadose Zone Soil	AIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0137366_108457891	3300012354	Vadose Zone Soil	HEAGPAMPPTDALYAASAQLHREIADRHGLALEVGTTVLPHHAIVPTECPGTLDLERIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKG*
Ga0137360_117394552	3300012361	Vadose Zone Soil	ALYAASAHLHADIASRYGLALAVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALMTGVPTADLSGPDVETGQAFDAKTAARR*
Ga0137373_107464181	3300012532	Vadose Zone Soil	HEAGPAMPPTDALYAASAQLHREIADRHGLALEVGTTVLPHHAIVPTECPGTLDLERIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGQPFKS*
Ga0137396_104092991	3300012918	Vadose Zone Soil	AASAWLHQKLSLDHGIRLIVGDTVKPHRAIVTTECPGTLDLERIVNEAGGEDMFTDDDRKMLKRVYDHLEAYEPLVWTKRLQQWAARAIHSIYASADLTGPDVETGEPFK*
Ga0137394_102766094	3300012922	Vadose Zone Soil	SVGTTVLPHHAIVPTECPGTLDLERIVREAGQEDDMFTDEDRRMLRRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADISGPDVESGQPFKG*
Ga0134077_100893021	3300012972	Grasslands Soil	AMAPTDALYAASAELHADIAVRHGLDLVVGTTVLPHRAIVPTECPGTLDVDRIVREATEEDDMFTDEDRRMLRRVYDHLEAYEPLVWTTRLQQWLAKAFRSVFPDADLSGPEVQSGQSYKG*
Ga0134110_103960632	3300012975	Grasslands Soil	LEVGRTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVETGEPFKG*
Ga0134081_104129301	3300014150	Grasslands Soil	HHAIVPTKCPGTLDLDRIVRDALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0134089_104642891	3300015358	Grasslands Soil	GPAMPPSDALYAASARLHADIASRYSLALAVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEDDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFGSGLPNADLSGPDVETGQPFDAKTASRR*
Ga0134085_103589832	3300015359	Grasslands Soil	PSDALYAASARLHADIAARYGLGLEVGATVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALLTGVPSADLSGPDVETGQAFDAKTASRR*
Ga0134069_11811981	3300017654	Grasslands Soil	PTAGPAMPPSDALYGASAGLHADIAARYGLTLEVGRTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEDDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFGTGLPNADLSGPDVETGQPFDARTASRR
Ga0190272_132676521	3300018429	Soil	GLALDVGTTVLPHRAIVPTECPGTLDLERIVREATEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSIFPNADLSGPDVETNQPFKG
Ga0066655_113269971	3300018431	Grasslands Soil	LPHRAIVPTQCPGTLDLERIVRQALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTARLQRWLAKEIRSVFAHADTSGPDVETGQPFTD
Ga0066662_111046301	3300018468	Grasslands Soil	SRYSLDLHVGATVLPHRAIVPTQCPGTLDLERIVRQALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTARLQRWLAKEIRSVFAHADTSGPDVETGQPFTD
Ga0066669_119128201	3300018482	Grasslands Soil	MPPTDALYTASARLHADIASRHGLALNVGTTVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPSADLSGPDVETGQAFDAKTASRR
Ga0066669_123833251	3300018482	Grasslands Soil	VGSAVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALMTGLPAADLSGPDVETGQAFEAKTASRR
Ga0066669_123929882	3300018482	Grasslands Soil	PTQCPGLLDIARIADQAGEEDDMFTDDDRRKLNRVYDHLEAYEPLVWVSRLQRWLAIAIRSVFPNADLSGPDVETGQPYRAETLSRR
Ga0184642_14832361	3300019279	Groundwater Sediment	ALAVGTTVLPHHAIVPTECPGTLDLERIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQQWVAKALGTGLPNADLSGPDVETGQAFDAKTVSRR
Ga0193723_11017412	3300019879	Soil	AGPAMPPSDALYAASARLHADIATRYAFPLEVGSTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEGYEPLVWTKRLQQWLASALETGLPESDLSGPDVETGQAFDAKAAASRR
Ga0193747_100070412	3300019885	Soil	YAASARLHADIATRYGLTLEVGSTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALGTGLPNADLSGPDVETGQAFDAKTVSRR
Ga0193733_10145321	3300020022	Soil	IASRHGLTLEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPAADLSGPDVETGQAFDAKTASRR
Ga0210382_102791131	3300021080	Groundwater Sediment	AIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSIFPNADVSGPDVESGQPFKG
Ga0193719_101659472	3300021344	Soil	HEAGPAMPPSDALYAASARLHADIASRHGLALEVGATVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWVAKALGTGLPNADLSGPDVETGQPFDAKSVSRR
Ga0222622_103718521	3300022756	Groundwater Sediment	DLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRQMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0207653_103211411	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	PRDALYAASARLHLEIAHRHGLDLAVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0207684_108641382	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLPHHAIVPTECPGTLDLDRIVSEAQQVLEEDDMFTDADRAKLDRIYEHLEAYEPLTWTKRLQQWLARAFRTQFPEADLGGPDVETGQPFKG
Ga0207640_108232262	3300025981	Corn Rhizosphere	LYAASARLHADIATRYALPLEVGTTVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQVWLAKALASGLPEADLSGPDVESGQAFDAKTAARR
Ga0209468_11589051	3300026306	Soil	ALYTASAGLHADIARRYGLDLAVGTTVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPTADLSGPDVETGQAFDARTASR
Ga0209153_12535571	3300026312	Soil	MRSRSVGPMPSPWSVMRMSAASARLHVDIASRYSLALVPDQTMVPHWAIVPTQCPGLLDIARIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALLTGIPSADLSGPDVETAQPFDPKTIARR
Ga0209470_11476801	3300026324	Soil	PHRAIVPTECPGTLDLDRIVREATEEDDMFTDEDRRMLRRVYDHLEAYEPMVWTTRLQQWLAKAFRSVFPDADLSGPDVQSGQSYKG
Ga0209803_10580731	3300026332	Soil	GTTVLPHHAIVPTECPGTLDLDRIVREALQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG
Ga0209158_12936481	3300026333	Soil	LALNVGTSVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALASGLPTADLSGPDVESGQAFDAKTVSRR
Ga0209159_12503091	3300026343	Soil	AVGTTVLPHHAIVPTECPGTLDLDRIVREALQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALSTGVPTADLSGPDVETGQAFDARTASRR
Ga0209808_11679252	3300026523	Soil	LPHHAIVPTECPGTLDLDRIVREARQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG
Ga0209378_10477263	3300026528	Soil	PPSDALYAASAQLHAEIASRHGLALRVGTTVLPHHAIVPTECPGTLDLDRIVREARQAEEEDDMFTEADRAKLDRIYQHLEAYEPLTWTKRLQQWIARAFRTQFPEADLGGPDVETGQPFKG
Ga0209161_104776801	3300026548	Soil	VDIASRYSLGLVPDQTLVPHWAIVPTQCPGLLDITRIAREAEQEDDMFTEDDRRKLNRVYDHLEAYEALTWTKRLQLWLARALLTGIPSSDLSGPDVETGQAFDPKTIARR
Ga0209474_105792161	3300026550	Soil	AARYGIALSPGETLVPHWAIVPTQCPGLLDIARIAEQAGEEDDMFTDDDRRKLNRVYDHLEAYEPLVWVSRLQRWLAIAIRSVFPNADLSGPDVETGQPYRAETLSRR
Ga0208988_11411242	3300027633	Forest Soil	MMAPTDALYAASAKLHREIAARHGLALNVGSTVLPHHAIVPTECPGTLDLDRIVRDALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKAVGTGLPNADLSGPDVETGQPFD
Ga0209387_10336641	3300027639	Agricultural Soil	YGLTLEVGSTVLPHRAVVPTECPGTLDLERIVREATEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADLSGPDVETNQPFKG
Ga0209388_10643533	3300027655	Vadose Zone Soil	AIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADLSGPDVDTGQPFKG
Ga0209180_105845602	3300027846	Vadose Zone Soil	RLHREVADRHRLALEVGMTVLPHHAIVPTECPGTLDLDRIVREASEEDDMFTEEDRRKLDRVYEHLEAYEPLVWTTRLQRWLAKAIRSVFPNADLSGPDVDTGQPFKG
Ga0209814_102886472	3300027873	Populus Rhizosphere	ALYTASAELHLEIAKRYGLALEVGTTVLPHRAIVPTECPGTLDLERIVREATEEDDMFTEEDRRKLDRVYQHLEAYEPLVWTTRLQRWLAKAIRSVFPNADLSGPDVETNQPFKG
Ga0209283_101936471	3300027875	Vadose Zone Soil	ARLHADIASRHSLALAVGTTVLPHHAIVPTECPGTLDLDRIVREAQEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLAKAFASGLPNADLSGPEVESGQAFDAKTASRR
Ga0307293_101130631	3300028711	Soil	AHRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRQMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307307_101343222	3300028718	Soil	AASARLHADIASRYGLALEVDTTVLPHRAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWVAKALGTGLPNADLSGPDVETGQPFDAKSVSRR
Ga0307282_100208913	3300028784	Soil	TTVLPHRAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWVAKALGTGLPNADLSGPDVETGQPFDAKSVSRR
Ga0307323_102590141	3300028787	Soil	AASARLHLEIAHRHGLDLAVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307290_103151501	3300028791	Soil	GPAMAPSEALYAASARLHLEIADRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRQMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307287_102226451	3300028796	Soil	AASARLHADIATRYGLALQVGATVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFSSGVPEADLSGPDVETGQPFDAETLSRR
Ga0307305_103411941	3300028807	Soil	GTTVLPHHAIVPTECPGTLDLERIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALTTGLPSADLSGPDVETGQAFDAKTVARR
Ga0307292_105121581	3300028811	Soil	IEHEAGPAMPPSDALYAASARLHLEIAHRHGLDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307302_106197022	3300028814	Soil	GTTVLPHHAIVPTECPGSLDLDRIVRDALEALKEEDMFTDADRAKLDRIYQHLEAYEPLTWTKRLQQWLAKAFRSINREADLSGPDVETGQPFKG
Ga0307302_106407091	3300028814	Soil	LDLSVGTTVLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307296_107744201	3300028819	Soil	HHAIVPTECPGTLDLERIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALTTGLPSADLSGPDVETGQAFDAKTVARR
Ga0307312_104484741	3300028828	Soil	DLAVGTTVLPHHAIVPTECPGTLDLDRIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307312_109388391	3300028828	Soil	AMPPSDALYAASARLHADIATRYGLALQVGATVLPHHAIVPTECPGTLDLGRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALMTGLPTADLSGPDVETGQAFDAKTASRR
Ga0307278_104225901	3300028878	Soil	VLPHHAIVPTECPGTLDLERIVREAEEEDDMFTEEDRRMLKRVYDHLEAYEPLVWTTRLQRWLAKAIRSVFPNADVSGPDVESGQPFKG
Ga0307300_102771851	3300028880	Soil	HADIATRHELALEVGATVLPHRAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLVWTTRLQRWLAKAFSSGVPEADLSGPDVETGQPFDAETLSRR
Ga0307469_100187174	3300031720	Hardwood Forest Soil	LPHHAIVPTECPGTLDLDRIVREALEEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKAVGTGLPNADLSGPDVETGQAFDAKTASRR
Ga0307469_117496461	3300031720	Hardwood Forest Soil	TVLPHHAIVPTECPGTLDLDRIVREALEEDDMFTEEDRRKLNRVYDHLEAYEPLTWTKRLQLWLARALLTGLPNADLSGPDVESGQAFDAKTAARR
Ga0307473_112688161	3300031820	Hardwood Forest Soil	EIASRHSLALVANQTLVPHSAIVPTQCPGLLDIARIAREAGQEDDMFTDADRAMLKRVYDHLEAYEPLTWTKRLQLWLAKALGTGMPTADLSGPDVETGQPFDATVASRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences