NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071080

Metagenome / Metatranscriptome Family F071080

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071080
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 64 residues
Representative Sequence MNPFVSTVYRDVTCGAAAVLITLLLSAAFVQSTSVAPGSRPEARHVLALQSAPGWFGQPEPAVLVD
Number of Associated Samples 99
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.07 %
% of genes near scaffold ends (potentially truncated) 23.77 %
% of genes from short scaffolds (< 2000 bps) 73.77 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.803 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.951 % of family members)
Environment Ontology (ENVO) Unclassified
(48.361 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(73.770 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.81%    β-sheet: 0.00%    Coil/Unstructured: 53.19%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF00392GntR 45.08
PF00005ABC_tran 21.31
PF02866Ldh_1_C 7.38
PF00056Ldh_1_N 5.74
PF02771Acyl-CoA_dh_N 0.82
PF13346ABC2_membrane_5 0.82
PF09317ACDH_C 0.82
PF14347DUF4399 0.82
PF13426PAS_9 0.82
PF13946DUF4214 0.82
PF00210Ferritin 0.82
PF02481DNA_processg_A 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0039Malate/lactate dehydrogenaseEnergy production and conversion [C] 13.11
COG1486Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolaseCarbohydrate transport and metabolism [G] 5.74
COG0758Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptakeReplication, recombination and repair [L] 1.64
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.82

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.80 %
UnclassifiedrootN/A8.20 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10011304All Organisms → cellular organisms → Bacteria → Proteobacteria4897Open in IMG/M
3300001661|JGI12053J15887_10341389Not Available726Open in IMG/M
3300001867|JGI12627J18819_10183941All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300002245|JGIcombinedJ26739_100278940All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1557Open in IMG/M
3300002557|JGI25381J37097_1052764All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300002908|JGI25382J43887_10467045All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria534Open in IMG/M
3300002909|JGI25388J43891_1000363All Organisms → cellular organisms → Bacteria8991Open in IMG/M
3300002909|JGI25388J43891_1001689All Organisms → cellular organisms → Bacteria4650Open in IMG/M
3300002911|JGI25390J43892_10028695All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1343Open in IMG/M
3300002915|JGI25387J43893_1001733All Organisms → cellular organisms → Bacteria → Proteobacteria2610Open in IMG/M
3300005166|Ga0066674_10519044All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria534Open in IMG/M
3300005171|Ga0066677_10137471All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300005175|Ga0066673_10089672All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1632Open in IMG/M
3300005179|Ga0066684_10059619All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300005179|Ga0066684_10288279All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1087Open in IMG/M
3300005181|Ga0066678_10504049Not Available805Open in IMG/M
3300005181|Ga0066678_10601024All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria731Open in IMG/M
3300005451|Ga0066681_10024406All Organisms → cellular organisms → Bacteria3135Open in IMG/M
3300005454|Ga0066687_10046838Not Available1993Open in IMG/M
3300005454|Ga0066687_10056628All Organisms → cellular organisms → Bacteria1849Open in IMG/M
3300005538|Ga0070731_10210507All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300005553|Ga0066695_10051839All Organisms → cellular organisms → Bacteria → Proteobacteria2439Open in IMG/M
3300005566|Ga0066693_10494609All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria505Open in IMG/M
3300005568|Ga0066703_10091719Not Available1773Open in IMG/M
3300005569|Ga0066705_10320699All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300005610|Ga0070763_10571540All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300005921|Ga0070766_10394938All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300005921|Ga0070766_10710169All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria681Open in IMG/M
3300006034|Ga0066656_11105446All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria510Open in IMG/M
3300006041|Ga0075023_100201493All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300006794|Ga0066658_10011372All Organisms → cellular organisms → Bacteria3292Open in IMG/M
3300006794|Ga0066658_10073043Not Available1543Open in IMG/M
3300006794|Ga0066658_10579174All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium610Open in IMG/M
3300006796|Ga0066665_10206115All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300006796|Ga0066665_10599185All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria886Open in IMG/M
3300006797|Ga0066659_10877819All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300007258|Ga0099793_10435876Not Available647Open in IMG/M
3300007788|Ga0099795_10015851All Organisms → cellular organisms → Bacteria2371Open in IMG/M
3300009012|Ga0066710_101976051All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria867Open in IMG/M
3300009012|Ga0066710_103263323All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300009137|Ga0066709_100097732All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3583Open in IMG/M
3300010043|Ga0126380_11933285All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300010303|Ga0134082_10086036All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1234Open in IMG/M
3300010320|Ga0134109_10105642All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300010326|Ga0134065_10356394All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria576Open in IMG/M
3300012198|Ga0137364_11385509All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria521Open in IMG/M
3300012202|Ga0137363_10238034All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300012203|Ga0137399_10042380All Organisms → cellular organisms → Bacteria → Proteobacteria3243Open in IMG/M
3300012207|Ga0137381_10997862All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012208|Ga0137376_10015492All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5665Open in IMG/M
3300012285|Ga0137370_10009446All Organisms → cellular organisms → Bacteria4601Open in IMG/M
3300012285|Ga0137370_10915386All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria542Open in IMG/M
3300012349|Ga0137387_10152484Not Available1646Open in IMG/M
3300012361|Ga0137360_10572559All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300012918|Ga0137396_10054823All Organisms → cellular organisms → Bacteria2745Open in IMG/M
3300012918|Ga0137396_10287898All Organisms → cellular organisms → Bacteria → Proteobacteria1214Open in IMG/M
3300012925|Ga0137419_10168749All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1595Open in IMG/M
3300012925|Ga0137419_10926844Not Available718Open in IMG/M
3300012927|Ga0137416_11549942All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria602Open in IMG/M
3300012930|Ga0137407_10916665All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300012975|Ga0134110_10282591All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium713Open in IMG/M
3300012977|Ga0134087_10249550All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300014150|Ga0134081_10027183Not Available1639Open in IMG/M
3300018431|Ga0066655_10011901All Organisms → cellular organisms → Bacteria3807Open in IMG/M
3300018431|Ga0066655_10127986All Organisms → cellular organisms → Bacteria → Proteobacteria1471Open in IMG/M
3300018433|Ga0066667_10036776All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2821Open in IMG/M
3300018433|Ga0066667_10192563All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300018433|Ga0066667_10835856All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria787Open in IMG/M
3300018468|Ga0066662_10011920All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4570Open in IMG/M
3300018468|Ga0066662_10243699All Organisms → cellular organisms → Bacteria → Proteobacteria1463Open in IMG/M
3300018468|Ga0066662_10905953All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria866Open in IMG/M
3300018482|Ga0066669_10518869All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300020022|Ga0193733_1029411All Organisms → cellular organisms → Bacteria1552Open in IMG/M
3300020170|Ga0179594_10375548All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300020199|Ga0179592_10107659All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1280Open in IMG/M
3300020199|Ga0179592_10176632All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300020579|Ga0210407_10213448All Organisms → cellular organisms → Bacteria → Proteobacteria1501Open in IMG/M
3300020582|Ga0210395_10056345All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2881Open in IMG/M
3300021088|Ga0210404_10040107All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2151Open in IMG/M
3300021151|Ga0179584_1483873All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300021402|Ga0210385_11408238All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria533Open in IMG/M
3300021420|Ga0210394_10100056All Organisms → cellular organisms → Bacteria → Proteobacteria2508Open in IMG/M
3300021432|Ga0210384_10903871All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria783Open in IMG/M
3300021478|Ga0210402_11604983All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300021559|Ga0210409_10124606All Organisms → cellular organisms → Bacteria2368Open in IMG/M
3300024330|Ga0137417_1101774All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1561Open in IMG/M
3300026277|Ga0209350_1000268All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria32740Open in IMG/M
3300026295|Ga0209234_1053569All Organisms → cellular organisms → Bacteria → Proteobacteria1533Open in IMG/M
3300026295|Ga0209234_1070214All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300026295|Ga0209234_1274340All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria543Open in IMG/M
3300026298|Ga0209236_1183106All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300026301|Ga0209238_1000599All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria13044Open in IMG/M
3300026308|Ga0209265_1002870All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5268Open in IMG/M
3300026310|Ga0209239_1207690Not Available697Open in IMG/M
3300026314|Ga0209268_1003992All Organisms → cellular organisms → Bacteria6684Open in IMG/M
3300026316|Ga0209155_1000619All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria17091Open in IMG/M
3300026317|Ga0209154_1000118All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria57473Open in IMG/M
3300026318|Ga0209471_1069617All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1576Open in IMG/M
3300026323|Ga0209472_1001420All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria13863Open in IMG/M
3300026324|Ga0209470_1087624All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1415Open in IMG/M
3300026330|Ga0209473_1187013All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300026332|Ga0209803_1020098All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3310Open in IMG/M
3300026355|Ga0257149_1017701All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria961Open in IMG/M
3300026481|Ga0257155_1067917All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300026550|Ga0209474_10227850All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300027181|Ga0208997_1053150All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300027266|Ga0209215_1013851All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300027603|Ga0209331_1009934All Organisms → cellular organisms → Bacteria2501Open in IMG/M
3300027616|Ga0209106_1020887All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1424Open in IMG/M
3300027633|Ga0208988_1021165All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1667Open in IMG/M
3300027738|Ga0208989_10027822All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1954Open in IMG/M
3300027855|Ga0209693_10149605All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300028047|Ga0209526_10113506All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1905Open in IMG/M
3300028047|Ga0209526_10492481All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria800Open in IMG/M
3300028536|Ga0137415_10388076All Organisms → cellular organisms → Bacteria → Proteobacteria1200Open in IMG/M
3300031047|Ga0073995_10127806All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria621Open in IMG/M
3300031720|Ga0307469_10083134All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2177Open in IMG/M
3300031753|Ga0307477_10056736All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2694Open in IMG/M
3300031753|Ga0307477_10274028All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300031962|Ga0307479_10568147All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1116Open in IMG/M
3300032180|Ga0307471_103142351All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria585Open in IMG/M
3300032205|Ga0307472_100469427All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1075Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil20.49%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.85%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.02%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.28%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.46%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.82%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002915Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031047Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1001130463300001661Forest SoilMNTFVSTLYRDVTCGAAAILITLVLAAAFVQSTSVAPGQAGTGRVLALQTTHGWFGQPEPAVLVD*
JGI12053J15887_1034138923300001661Forest SoilMNTFVSTLYRDVTCGAAAILITLVLAAAFVQSTSVAPGQAGTGRVLALQATYG
JGI12627J18819_1018394123300001867Forest SoilMNALTANLSRDLTCGAAAALITMFLSATFVESTSVAPEARVEEARHVLTLQLTHGWFGQPEPAVLVD*
JGIcombinedJ26739_10027894033300002245Forest SoilMNTFVSTLYRDVTCGAAAIFITXAFGAAFVQSTSVAPGHAGSARVLALQTTQGWFGQPEPAVLVD*
JGI25381J37097_105276413300002557Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSAAFVQASSEAPGRHRGSAHVALQSTHAWFGQPEPAVLVD*
JGI25382J43887_1046704513300002908Grasslands SoilMSALNFNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
JGI25388J43891_1000363103300002909Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAQAMQLTHGWFGQPEPAVLVD*
JGI25388J43891_100168953300002909Grasslands SoilMSALNFNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
JGI25390J43892_1002869523300002911Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD*
JGI25387J43893_100173333300002915Grasslands SoilMNAFVSEFYRDATCGAGAVLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD*
Ga0066674_1051904423300005166SoilMNAFVSELYRDASCGAGAVLITLVLSAAFVQATSAAPGAHRHSGQVLAQSTHGWFGQPEPAVLVD*
Ga0066677_1013747133300005171SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAHVAMQLTHGWFGQPEPAVLVD*
Ga0066673_1008967233300005175SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEGRHALTLQLTHGWFGQPEPAVLVD*
Ga0066684_1005961933300005179SoilMNTFVSELYRDVSCGAGAVLITLALSATFVQASSEAPGTHRSSGHVALQSTHAWFGQPEPAVLVD*
Ga0066684_1028827923300005179SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVVPEARVKEGRHALTLQLTHGWFGQPEPAVLVD*
Ga0066678_1050404913300005181SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRSEARHVLALRSAPGWFGQPEPAVLVD*
Ga0066678_1060102423300005181SoilMSALNSNLCRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEGRHALTLQLTHGWFGQPEPAVLVD*
Ga0066681_1002440613300005451SoilAPNPQTVKEPIMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD*
Ga0066687_1004683813300005454SoilMSVLDSNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
Ga0066687_1005662813300005454SoilTVKEPIMNTFVSELYRDVSCGAGAVLITLALSAAFVQASSEAPGRHRGSAHVALQSTHAWFGQPEPAVLVD*
Ga0070731_1021050733300005538Surface SoilMTAFIETLYRDVTCGAAAAVITLTLSAAFVESTAVAPGTPNEVMHVFALQSPHGQAPHGWFGQPQPAVLVD*
Ga0066695_1005183913300005553SoilMNAFVSDLYRVASCGAGAVLITLVLSAAFVQATSAAPGAHRHSGQVLAQSTHGWFGQPEPAVLVD*
Ga0066693_1049460923300005566SoilMNAFVSEFYRDAACGAGAVLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD*
Ga0066703_1009171933300005568SoilMNVLVSEFYRDATCGAGAVLITLALSAAFVQATSAAPGTHRDSRHVVALQSTHGWFGQPEPAVLVD*
Ga0066705_1032069933300005569SoilMNAFVSEFYRDATCGAGALLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD*
Ga0070763_1057154023300005610SoilMNTFVSTLYRDLTCGAAAILITLVLGAAFVRSTSVAPGQAGSARVLALQTTHGWFGQPEPAVLVD*
Ga0070766_1039493823300005921SoilMNTFVSALYRDLTCGAAAILITLGLSAAFVQSTSVAPGQAASARVLALQTTHDWFGQPEPAVLVD*
Ga0070766_1071016933300005921SoilMNTFVSALYRDLTCGAGAVLITLILSTAFVQSTSVAPGTHSDRPHVLALQSTHGWFGQPEPAVL
Ga0066656_1110544623300006034SoilMSVLDSNLSRDLTCGAAAVLITTALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
Ga0075023_10020149333300006041WatershedsSALYRDLTCGAAAILITLALGAAFVQSTSVAPGHAGSARVLALQTTHGWFGQPEPAVLVD
Ga0066658_1001137263300006794SoilAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
Ga0066658_1007304333300006794SoilMSVLDSNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFG
Ga0066658_1057917423300006794SoilMSALNFNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFG
Ga0066665_1020611533300006796SoilCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
Ga0066665_1059918533300006796SoilMSALNFNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLT
Ga0066659_1087781933300006797SoilASCGAGAVLITLVLSAAFVQATSEAPGTHRDRGHVVALQSTHGWFGQPEPAVLVD*
Ga0099793_1043587613300007258Vadose Zone SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPQARHVLALRSARGWFGQPEPAVLVD*
Ga0099795_1001585143300007788Vadose Zone SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRSEARHVLAQRSAPGWFGQPEPAVLVD*
Ga0066710_10197605113300009012Grasslands SoilMSALNFNLSRDLICGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLT
Ga0066710_10326332313300009012Grasslands SoilAPNPQTVKEPIMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD
Ga0066709_10009773243300009137Grasslands SoilMNAFVSELYRDASCGAGAVLITLVLSAAFVQATSEAPGTHRDRGHVVALQSTHGWFGQPEPAVLVD*
Ga0126380_1193328513300010043Tropical Forest SoilRDLTCGAGAVLISAILAAAFVQSTSVAPGAPTQVKHLFALHKAAPTHGWFGQPHPAVLVD
Ga0134082_1008603633300010303Grasslands SoilSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAHVAMQLTHGWFGQPEPAVLVD
Ga0134109_1010564213300010320Grasslands SoilTMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD*
Ga0134065_1035639423300010326Grasslands SoilMNAFVSEFYRDATCGAGAVLITLVLSAAFVQATSAAPGAHRHSGQVLAQSTHGWFGQPEPAVLVD*
Ga0137364_1138550923300012198Vadose Zone SoilMNVFVSELYRDASCGAGAVLITLALSAAFVQATSEAPGAHRDRGHVVALRSTHGWFGQPEPAVLVD*
Ga0137363_1023803433300012202Vadose Zone SoilMNPFVSTLYRDVTCGAAAILITLLLSAVFVQSTSVAPGSRSEARHVLALRSAPGWFGQPEPAVLVD*
Ga0137399_1004238013300012203Vadose Zone SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHVLALRSAPGWFGQPEPAVLVD*
Ga0137381_1099786223300012207Vadose Zone SoilNLSRYLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHAVTLQLTHGWFGQPEPAVLVD*
Ga0137376_1001549233300012208Vadose Zone SoilMNAFVSELYRDASCGAGAVLITLVLSAAFVQATSEAPGTHRDRGHVVALESTHGWFGQPEPAVLVD*
Ga0137370_1000944663300012285Vadose Zone SoilMSALNFNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEGRHALTLQLTHGWFGQPEPAVLVD*
Ga0137370_1091538623300012285Vadose Zone SoilMNVLVSELYRDATCGAGAVLITLALSAAFVQATSAAPGTHRDSRHVVALQSTHGWFGQPEPAVLVD*
Ga0137387_1015248423300012349Vadose Zone SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD*
Ga0137360_1057255923300012361Vadose Zone SoilMNPYVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRSEARHVLAQRSAPGWFGQPEPAVLVD*
Ga0137396_1005482343300012918Vadose Zone SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRREARHVLALRSAPGWFGQPEPAVLVD*
Ga0137396_1028789833300012918Vadose Zone SoilMNTFVSAFYRDVTCGAAATLITLVLGATFVQSTSVAPGTHVDSGRISAVQTTHAWF
Ga0137419_1016874923300012925Vadose Zone SoilMNPFVSTVYRDVTCGAAAVVITLLLSAAFVESTSVAPGTRPQARHVLALQSDHGWFGQPEPAVLVD*
Ga0137419_1092684413300012925Vadose Zone SoilMNPYVSTVYRDLTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHVLALRSAPGWFGQPEPAVLVD*
Ga0137416_1154994223300012927Vadose Zone SoilMNPFVSTVYRDVTCGAAAVLITLLLSAAFVESTSVAPGTRPQARHVLALQSDHGWFGQPEPAVLVD*
Ga0137407_1091666523300012930Vadose Zone SoilMNPFVSTLYRDVTCGAGAILITLLLCAAFVQSTSVAPGSRSEARHVLAQRSAPGWFGQPEPAVLVD*
Ga0134110_1028259123300012975Grasslands SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVVPEARVKEGRHALTLQLT
Ga0134087_1024955033300012977Grasslands SoilVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD*
Ga0134081_1002718333300014150Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAHVAMQLTHGWFGQPEPPVLVD*
Ga0066655_1001190163300018431Grasslands SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEGRHALTLQLTHGWFGQPEPAVLVD
Ga0066655_1012798633300018431Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD
Ga0066667_1003677633300018433Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSATFVQASSEAPGTHRSSGHVALQSTHAWFGQPEPAVLVD
Ga0066667_1019256333300018433Grasslands SoilTMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAHVAMQLTHGWFGQPEPAVLVD
Ga0066667_1083585623300018433Grasslands SoilMSALNFNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0066662_1001192013300018468Grasslands SoilDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0066662_1024369923300018468Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAQAMQLTHGWFGQPEPAVLVD
Ga0066662_1090595313300018468Grasslands SoilMSALNFNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQ
Ga0066669_1051886933300018482Grasslands SoilMNAFVSEFYRDAACGAGAVLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD
Ga0193733_102941123300020022SoilMNTFVSTLYRDVTCGAAAILITLAFGAAFVQSTSVAPGHASSARVLALQTTQGWFGQPEPAVLVD
Ga0179594_1037554813300020170Vadose Zone SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRSEARHVLALRSAPGWFGQPEPAVLVD
Ga0179592_1010765933300020199Vadose Zone SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRSEARHVLAQRSAPGWFGQPEPAVLVD
Ga0179592_1017663223300020199Vadose Zone SoilMNPFVSTVYREVTCGAAAVLITLLLSAAFVESTSVAPGSRPPARHVLALQSAPGWFGQPEPAVLVD
Ga0210407_1021344833300020579SoilMNTFVSTLYRNLTCGAAAILIALVCGAAFVQSTSVAPGHAGTARVLALQTTHGWFGQPEPAVLVD
Ga0210395_1005634533300020582SoilMNPFVSTVYREVTCGAAAVLITLLLSAAFVQSTSAAPGSRPEARHVLARQSAPGWFGQPEPAVLVD
Ga0210404_1004010723300021088SoilMNTFVSALYRDLTCGAGAVLITLILSTAFVQSTSVAPGTHSDRPHVLAVQSTHGWFGQPEPAVLVD
Ga0179584_148387323300021151Vadose Zone SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHALALRSAPGWFGQPEPAVLVD
Ga0210385_1140823823300021402SoilMNTFVSALYRDLTCGAGAVLITLILSTAFVQSTSVAPGTHSDRPHVLALQSTHGWFGQPEPAVLVD
Ga0210394_1010005623300021420SoilMNTFVSAFYRDLTCGAGAVLITLILSAAFVQSTSVAPGTHSDRPHVLALQSSHGWFGQPEPAVLVD
Ga0210384_1090387123300021432SoilMNTFVSALYRDLTCGAAAILITLVLGAAFVQATSVAPGNAGTARVLALQTTYGWFGQPEPAVLVD
Ga0210402_1160498313300021478SoilMNTFVSALYRDLTCGAAAVVITVMLSAAFVQSTSVAPGTHSDGPRVLALQSTHGWFGQPEPAVLVD
Ga0210409_1012460633300021559SoilMNTFVSTLYRDLTCGAAAILITLVLSAAFVQSTSVAPGQAGTVRVLALQTTHGWFGQPEPAVLVD
Ga0137417_110177433300024330Vadose Zone SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRREARHVLALRSAPGWFGQPEPAVLVD
Ga0209350_1000268283300026277Grasslands SoilMSALNFNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0209234_105356933300026295Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSAAFVQASSEAPGRHRGSAHVALQSTHAWFGQPEPAVLVD
Ga0209234_107021433300026295Grasslands SoilMNAFVSEFYRDATCGAGALLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD
Ga0209234_127434023300026295Grasslands SoilMSVLDSNLSRDLTCGAAAVLITMALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0209236_118310623300026298Grasslands SoilMNAFVSELYRDASCGAGAVLITLVLSAAFVQATSEAPGTHRDRGHVVALQSTHGWFGQPEPAVLVD
Ga0209238_100059983300026301Grasslands SoilMNAFVSEFYRDATCGAGAVLITLVLSAAFVQATSAAPGTHRNSGHVLAQSTHGWFGQPEPAVLVD
Ga0209265_100287063300026308SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVVPEARVKEGRHALTLQLTHGWFGQPEPAVLVD
Ga0209239_120769013300026310Grasslands SoilMNTFVSELYRDVSCGAGAVLITLALSATFVQASSEAPGTHRSSGHVALQSTHAWF
Ga0209268_100399293300026314SoilMNAFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGAQAMQLTHGWFGQPEPAVLVD
Ga0209155_1000619163300026316SoilMSALNSNLSRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0209154_1000118393300026317SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAHVAMQLTHGWFGQPEPAVLVD
Ga0209471_106961733300026318SoilMNPFVSTLYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHVLALRSAPGWFGQPEPAVLVD
Ga0209472_1001420103300026323SoilMNTFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHGALAMQLTHGWFGQPEPAVLVD
Ga0209470_108762433300026324SoilMNAFVSDLYRVASCGAGAVLITLVLSAAFVQATSAAPGAHRHSGQVLAQSTHGWFGQPEPAVLVD
Ga0209473_118701323300026330SoilMSVLDSNLSRDLTCGAAAVLITTALSATFVESTAVAPEARVKEARHALTLQLTHGWFGQPEPAVLVD
Ga0209803_102009813300026332SoilMSALNSNLCRDLTCGAAAVLITMVLSATFVESTAVAPEARVKEGRHALTLQLTHGWFGQPEPAVLVD
Ga0257149_101770133300026355SoilRAGAARLTKPIVKEPIMNTFVSTLYRDLTCGAAAILITLALGAAFVQSTSVAPGQAGTGRVLALQTTHGWFGQPEPAVLVD
Ga0257155_106791723300026481SoilMNPFVSTVYRDVTCGAAAVLITLLLSAAFVQSTSVAPGSRPEARHVLALQSAPGWFGQPEPAVLVD
Ga0209474_1022785033300026550SoilFVSELYRDVSCGAGAVLITLALSGAFVQATSEAPGTRHDRAQAMQLTHGWFGQPEPAVLV
Ga0208997_105315013300027181Forest SoilMNTFVSTLYRDVTCGAAAILITLVLAAAFVQSTSVAPGQAGTGRVLALQTTHGWFGQPEPAVLVD
Ga0209215_101385123300027266Forest SoilMNALTANLSRDLTCGAAAALITMFLSATFVESTSVAPEARVEEARHVLTLQLTHGWFGQPEPAVLVD
Ga0209331_100993433300027603Forest SoilMNTFVSTLYRDVTCGAAAIFITLAFGAAFVQSTSVAPGHAGSARVLALQTTQGWFGQPEPAVLVD
Ga0209106_102088733300027616Forest SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHVLALPSAPGWFGQPEPAVLVD
Ga0208988_102116533300027633Forest SoilMNPFVSTFYRDVTCGAGAILITLLLSAAFVQSTSVAPGSRPEARHVLALPSAPSWFGQPEPAVLVD
Ga0208989_1002782233300027738Forest SoilMNPFLSTLYRDVTCGAAAILITLLLSAAFVQSTSVAPGSRPKARHVLALRSAPGWFGQPEPAVLVD
Ga0209693_1014960533300027855SoilMNTFVSTLYRDLTCGAAAILITLVLGAAFVRSTSVAPGQAGSARVLALQTTHGWFGQPEPAVLVD
Ga0209526_1011350633300028047Forest SoilMNTLASALYRSVTCGVAAVLITVLLSVAFLQSTSVAPGTHADPRHVLALQSDHGWFGQPEPAVLVD
Ga0209526_1049248123300028047Forest SoilMNTFVSTLYRDVTCGAAAIFITVAFGAAFVQSTSVAPGHAGSARVLALQTTQGWFGQPEPAVLVD
Ga0137415_1038807633300028536Vadose Zone SoilMNPFVSTVYRDVTCGAAAVLITLLLSAAFVESTSVAPGTRPQARHVLALQSDHGWFGQPEPAVLVD
Ga0073995_1012780623300031047SoilMNTFVSTLYRDVTCGAAAILITLAFGAAFVQSTSVAPGHAGSAGVLALQTTQGWFGQPQPAVLVD
Ga0307469_1008313443300031720Hardwood Forest SoilMNALTANLSRDLTCGAAAVLITMALSATFVESTAVAPEARVAEARHVLTLQLTHGWFGQPEPAVLVD
Ga0307477_1005673633300031753Hardwood Forest SoilMNPFVSTVYRDVTCAAAAVLITLLLSAAFVQSTSVAPGSRPEARHAFALRSAPGWFGQPEPAVLVD
Ga0307477_1027402823300031753Hardwood Forest SoilMNPLVATLYREVTCGAAAVLITLLLSAAFVHSTSVAPGSRPEGRHVLALQSAPSWFGQPEPAVLVD
Ga0307479_1056814733300031962Hardwood Forest SoilMSPFFSTVYRDVTCAAAAVLITLLLSAAFVQSTSVAPGSRPEARHAFALRSAPGWFGQPEPAVLVD
Ga0307471_10314235123300032180Hardwood Forest SoilMNTFVSTLYRDLTCGAAAILITLVLGAAFVQSTSVAPGHAGTARVLALQTAHGWFGQPEPAVLVD
Ga0307472_10046942713300032205Hardwood Forest SoilRLIKELTMNALTANLSRDLTCGAAAVLITMALSATFVESTAVAPEARVAEARHVLTLQLTHGWFGQPEPAVLVD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.