NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071270

Metagenome / Metatranscriptome Family F071270

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071270
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 72 residues
Representative Sequence MPDAYTLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Number of Associated Samples 108
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.21 %
% of genes near scaffold ends (potentially truncated) 22.13 %
% of genes from short scaffolds (< 2000 bps) 61.48 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.295 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine
(11.475 % of family members)
Environment Ontology (ENVO) Unclassified
(51.639 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(66.393 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.50%    β-sheet: 0.00%    Coil/Unstructured: 50.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.152.1.1: AhpDd1knca_1knc0.66575
a.284.1.1: YejL-liked2jrxa12jrx0.63095
a.118.1.14: MIF4G domain-liked1paqa_1paq0.62915
c.1.10.1: Class I aldolased3dfqa_3dfq0.62251
c.37.1.9: Motor proteinsd1w7ja21w7j0.61722

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF02586SRAP 22.13
PF00501AMP-binding 13.11
PF00248Aldo_ket_red 8.20
PF00296Bac_luciferase 6.56
PF13193AMP-binding_C 6.56
PF04264YceI 4.10
PF00144Beta-lactamase 3.28
PF13450NAD_binding_8 2.46
PF00848Ring_hydroxyl_A 1.64
PF00355Rieske 1.64
PF13384HTH_23 1.64
PF12801Fer4_5 1.64
PF02729OTCace_N 0.82
PF01979Amidohydro_1 0.82
PF13545HTH_Crp_2 0.82
PF08327AHSA1 0.82
PF00378ECH_1 0.82
PF00890FAD_binding_2 0.82
PF12852Cupin_6 0.82
PF13738Pyr_redox_3 0.82
PF00384Molybdopterin 0.82
PF00441Acyl-CoA_dh_1 0.82
PF01266DAO 0.82
PF06779MFS_4 0.82
PF064393keto-disac_hyd 0.82
PF00300His_Phos_1 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 22.13
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 6.56
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 4.10
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 3.28
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 3.28
COG2367Beta-lactamase class ADefense mechanisms [V] 3.28
COG4638Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunitInorganic ion transport and metabolism [P] 3.28
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.82

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.30 %
UnclassifiedrootN/A37.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876008|none_p378347Not Available526Open in IMG/M
3300000930|BpDRAFT_10027806All Organisms → cellular organisms → Bacteria17004Open in IMG/M
3300001355|JGI20158J14315_10110531Not Available918Open in IMG/M
3300001683|GBIDBA_10000298All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria125657Open in IMG/M
3300001683|GBIDBA_10001464All Organisms → cellular organisms → Bacteria → Proteobacteria29005Open in IMG/M
3300003265|JGI26118J46590_1015814Not Available902Open in IMG/M
3300003271|JGI26114J46594_1022440Not Available1021Open in IMG/M
3300003478|JGI26238J51125_1040737Not Available986Open in IMG/M
3300003588|JGI26247J51722_1010405All Organisms → cellular organisms → Bacteria → Proteobacteria2768Open in IMG/M
3300003588|JGI26247J51722_1078014Not Available608Open in IMG/M
3300003589|JGI26248J51725_1068206Not Available611Open in IMG/M
3300003988|Ga0055475_10048744All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1229Open in IMG/M
3300004055|Ga0055480_10046851All Organisms → cellular organisms → Bacteria → Proteobacteria1694Open in IMG/M
3300004065|Ga0055481_10209588Not Available829Open in IMG/M
3300004110|Ga0008648_10101428All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria802Open in IMG/M
3300004276|Ga0066610_10051227All Organisms → cellular organisms → Bacteria → Proteobacteria1489Open in IMG/M
3300004277|Ga0066611_10003831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7234Open in IMG/M
3300004279|Ga0066605_10048980All Organisms → cellular organisms → Bacteria → Proteobacteria1917Open in IMG/M
3300005239|Ga0073579_1051030All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300005402|Ga0066855_10153172All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300005837|Ga0078893_11704399All Organisms → cellular organisms → Bacteria → Proteobacteria6366Open in IMG/M
3300005837|Ga0078893_12522951Not Available642Open in IMG/M
3300005912|Ga0075109_1000004All Organisms → cellular organisms → Bacteria → Proteobacteria228240Open in IMG/M
3300005914|Ga0075117_1086644All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium945Open in IMG/M
3300006029|Ga0075466_1053006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1191Open in IMG/M
3300006399|Ga0075495_1473144All Organisms → cellular organisms → Bacteria → Proteobacteria1055Open in IMG/M
3300006465|Ga0082250_10094345Not Available733Open in IMG/M
3300006715|Ga0031670_1115477All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium666Open in IMG/M
3300006803|Ga0075467_10669960Not Available529Open in IMG/M
3300006902|Ga0066372_10100395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1493Open in IMG/M
3300007519|Ga0105055_10388206All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium UPO611231Open in IMG/M
3300007520|Ga0105054_10847204Not Available658Open in IMG/M
3300007775|Ga0102953_1008586All Organisms → cellular organisms → Bacteria5093Open in IMG/M
3300007981|Ga0102904_1033978All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1151Open in IMG/M
3300008961|Ga0102887_1024038All Organisms → cellular organisms → Bacteria2131Open in IMG/M
3300008993|Ga0104258_1051640All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria769Open in IMG/M
3300009030|Ga0114950_10008999All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7765Open in IMG/M
3300009030|Ga0114950_10102131All Organisms → cellular organisms → Bacteria2289Open in IMG/M
3300009103|Ga0117901_1026129All Organisms → cellular organisms → Bacteria → Proteobacteria4322Open in IMG/M
3300009126|Ga0118723_1175160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1210Open in IMG/M
3300009129|Ga0118728_1031328All Organisms → cellular organisms → Bacteria → Proteobacteria3086Open in IMG/M
3300009130|Ga0118729_1000266All Organisms → cellular organisms → Bacteria → Proteobacteria76061Open in IMG/M
3300009139|Ga0114949_10269317All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300009370|Ga0118716_1034949All Organisms → cellular organisms → Bacteria → Proteobacteria3340Open in IMG/M
3300009423|Ga0115548_1236765Not Available562Open in IMG/M
3300009426|Ga0115547_1011068All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3917Open in IMG/M
3300009467|Ga0115565_10220795Not Available871Open in IMG/M
3300009505|Ga0115564_10059213All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2250Open in IMG/M
3300010316|Ga0136655_1099331All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300012522|Ga0129326_1433295Not Available635Open in IMG/M
3300013101|Ga0164313_11447488Not Available554Open in IMG/M
3300013114|Ga0171650_1045879Not Available1506Open in IMG/M
3300013115|Ga0171651_1076974All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300017824|Ga0181552_10007187All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales7497Open in IMG/M
3300017824|Ga0181552_10292732Not Available805Open in IMG/M
3300017968|Ga0181587_10757160Not Available609Open in IMG/M
3300018415|Ga0181559_10209746Not Available1114Open in IMG/M
3300020165|Ga0206125_10055775All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300020165|Ga0206125_10105200All Organisms → cellular organisms → Bacteria → Proteobacteria1190Open in IMG/M
3300020182|Ga0206129_10235517Not Available781Open in IMG/M
3300020187|Ga0206130_10055780Not Available2734Open in IMG/M
3300020234|Ga0212227_1011289All Organisms → cellular organisms → Bacteria1652Open in IMG/M
3300020235|Ga0212228_1004859Not Available1427Open in IMG/M
3300020235|Ga0212228_1007185All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7656Open in IMG/M
3300020352|Ga0211505_1002688All Organisms → cellular organisms → Bacteria → Proteobacteria5305Open in IMG/M
3300020375|Ga0211656_10040763Not Available1536Open in IMG/M
3300020407|Ga0211575_10024032Not Available2625Open in IMG/M
3300021065|Ga0206686_1010202Not Available2654Open in IMG/M
3300021084|Ga0206678_10195659All Organisms → cellular organisms → Bacteria → Proteobacteria1005Open in IMG/M
3300021084|Ga0206678_10416071Not Available630Open in IMG/M
3300021085|Ga0206677_10075395All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1660Open in IMG/M
3300021089|Ga0206679_10019618All Organisms → cellular organisms → Bacteria4382Open in IMG/M
3300021334|Ga0206696_1323882All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium562Open in IMG/M
3300021342|Ga0206691_1219727All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1153Open in IMG/M
3300021352|Ga0206680_10226908Not Available724Open in IMG/M
3300021365|Ga0206123_10008851All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6925Open in IMG/M
3300021365|Ga0206123_10128761All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1178Open in IMG/M
3300022223|Ga0224501_10051080All Organisms → cellular organisms → Bacteria2797Open in IMG/M
3300022223|Ga0224501_10051653All Organisms → cellular organisms → Bacteria2776Open in IMG/M
3300022833|Ga0222645_130371Not Available653Open in IMG/M
3300022836|Ga0222654_1000035All Organisms → cellular organisms → Bacteria → Proteobacteria121157Open in IMG/M
3300022925|Ga0255773_10170076Not Available1025Open in IMG/M
3300022928|Ga0255758_10314142Not Available660Open in IMG/M
(restricted) 3300022933|Ga0233427_10043262Not Available2460Open in IMG/M
(restricted) 3300023109|Ga0233432_10188154All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1041Open in IMG/M
3300023296|Ga0222664_1009755All Organisms → cellular organisms → Bacteria2245Open in IMG/M
3300023442|Ga0256751_1017619All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2591Open in IMG/M
3300024060|Ga0209987_10048467All Organisms → cellular organisms → Bacteria2392Open in IMG/M
(restricted) 3300024324|Ga0233443_1023157All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2931Open in IMG/M
(restricted) 3300024327|Ga0233434_1035446All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2497Open in IMG/M
3300025502|Ga0208903_1075398All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium790Open in IMG/M
3300025656|Ga0209054_1032704All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300025672|Ga0209663_1066496Not Available1156Open in IMG/M
3300025700|Ga0209661_1007393All Organisms → cellular organisms → Bacteria4673Open in IMG/M
3300025709|Ga0209044_1114680Not Available817Open in IMG/M
3300025722|Ga0209660_1017537Not Available2934Open in IMG/M
3300025729|Ga0209558_1132206Not Available849Open in IMG/M
3300025799|Ga0210122_1116691All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300025823|Ga0210123_1021946All Organisms → cellular organisms → Bacteria2300Open in IMG/M
3300025890|Ga0209631_10012845All Organisms → cellular organisms → Bacteria7403Open in IMG/M
3300025897|Ga0209425_10160938All Organisms → cellular organisms → Bacteria → Proteobacteria1240Open in IMG/M
3300026196|Ga0209919_1014798All Organisms → cellular organisms → Bacteria2547Open in IMG/M
3300027243|Ga0208174_1029769Not Available690Open in IMG/M
3300027413|Ga0208950_1004135All Organisms → cellular organisms → Bacteria5577Open in IMG/M
3300027677|Ga0209019_1148379Not Available636Open in IMG/M
3300027699|Ga0209752_1054333All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300028287|Ga0257126_1123009Not Available896Open in IMG/M
3300031519|Ga0307488_10012423All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium6898Open in IMG/M
3300031519|Ga0307488_10054831All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3069Open in IMG/M
3300031519|Ga0307488_10084049All Organisms → cellular organisms → Bacteria → Proteobacteria2360Open in IMG/M
3300031523|Ga0307492_10002887All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6863Open in IMG/M
3300031523|Ga0307492_10045312All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1502Open in IMG/M
3300031629|Ga0307985_10153454All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300031965|Ga0326597_11765264Not Available582Open in IMG/M
3300032134|Ga0315339_1097015Not Available951Open in IMG/M
3300032277|Ga0316202_10037706All Organisms → cellular organisms → Bacteria → Proteobacteria2298Open in IMG/M
3300032278|Ga0310345_10819277Not Available906Open in IMG/M
3300032278|Ga0310345_11403131Not Available683Open in IMG/M
3300032360|Ga0315334_10101660Not Available2207Open in IMG/M
3300032820|Ga0310342_100605878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1242Open in IMG/M
3300033407|Ga0214472_10899033Not Available790Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine11.48%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine5.74%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater5.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.74%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh4.92%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater4.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.10%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.28%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment3.28%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface3.28%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.28%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.28%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.28%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.46%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.46%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.46%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.46%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.46%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake2.46%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water2.46%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.64%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water1.64%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine1.64%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume1.64%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment1.64%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.64%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.82%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.82%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.82%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.82%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine0.82%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.82%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.82%
Hydrothermal Fe-Rich MatEnvironmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Fe-Rich Mat0.82%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.82%
Ocean WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water0.82%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876008Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-3LG-Deep1200EnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300003265Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10EnvironmentalOpen in IMG/M
3300003271Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300003588Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNAEnvironmentalOpen in IMG/M
3300003589Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNAEnvironmentalOpen in IMG/M
3300003988Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2EnvironmentalOpen in IMG/M
3300004055Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2EnvironmentalOpen in IMG/M
3300004065Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2EnvironmentalOpen in IMG/M
3300004110Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNAEnvironmentalOpen in IMG/M
3300004276Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165mEnvironmentalOpen in IMG/M
3300004277Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200mEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005912Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKDEnvironmentalOpen in IMG/M
3300005914Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006399Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006465Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IXEnvironmentalOpen in IMG/M
3300006715Metatranscriptome of deep ocean microbial communities from Pacific Ocean - MP1481 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300007519Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03EnvironmentalOpen in IMG/M
3300007520Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)EnvironmentalOpen in IMG/M
3300007775Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MGEnvironmentalOpen in IMG/M
3300007981Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3EnvironmentalOpen in IMG/M
3300008961Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02EnvironmentalOpen in IMG/M
3300008993Marine microbial communities from eastern North Pacific Ocean - P1 free-livingEnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009103Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7umEnvironmentalOpen in IMG/M
3300009126Combined Assembly of Gp0139357, Gp0139356EnvironmentalOpen in IMG/M
3300009129Combined Assembly of Gp0139513, Gp0139514EnvironmentalOpen in IMG/M
3300009130Combined Assembly of Gp0139511, Gp0139512EnvironmentalOpen in IMG/M
3300009139Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaGEnvironmentalOpen in IMG/M
3300009370Combined Assembly of Gp0127930, Gp0127931EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012522Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300013114Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300013115Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020234Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074EnvironmentalOpen in IMG/M
3300020235Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N075EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020375Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)EnvironmentalOpen in IMG/M
3300020407Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)EnvironmentalOpen in IMG/M
3300021065Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021089Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015EnvironmentalOpen in IMG/M
3300021334Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021342Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021352Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300022223Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022833Saline water microbial communities from Ace Lake, Antarctica - #292EnvironmentalOpen in IMG/M
3300022836Saline water microbial communities from Ace Lake, Antarctica - #421EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300022933 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023296Saline water microbial communities from Ace Lake, Antarctica - #604EnvironmentalOpen in IMG/M
3300023442Hydrothermal Fe-rich mat microbial community from Rainbow Site, Mid-Atlantic Ridge, Atlantic Ocean - 664-SC8EnvironmentalOpen in IMG/M
3300024060Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024324 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MGEnvironmentalOpen in IMG/M
3300024327 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MGEnvironmentalOpen in IMG/M
3300025502Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes)EnvironmentalOpen in IMG/M
3300025656Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025672Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025700Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025709Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025722Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025729Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025799Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025823Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026196Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027243Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027406Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_07_M0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027413Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027677Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)EnvironmentalOpen in IMG/M
3300027699Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)EnvironmentalOpen in IMG/M
3300028287Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031523Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SI3LEnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032134Ammonia-oxidizing marine archaeal communities from Pacific Ocean, United States - ASW #17EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_37834722236876008Marine EstuarineMTNAYSLAKAHLDKCILEASEHNIDLHAYGQALLWKLIERYKESGRSNLDIISEIQYTLDNIEDDGTFHVSRN
BpDRAFT_10027806173300000930Freshwater And MarineVNDAYSLASKHLDSGIAEASENNVDVNAYGQALIWMLIECYKKNGRTPEDIVNEIKYTLDNIEDDGTFHVSRN*
JGI20158J14315_1011053123300001355Pelagic MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRFTFHVSRSNRVLQTS
GBIDBA_10000298203300001683Hydrothermal Vent PlumeMADAYSLAKKHLDEGVAAAAAENIDLNKYGQALVWKLLELYVENGRDLKDINEEIQYTIENLGGDGIFHVVRN*
GBIDBA_10001464223300001683Hydrothermal Vent PlumeMASIDRIPIITKEQPVSDAYSLVSKHLDSSIAEARENNVDLNAYGQALIWMLIERYKQNGGTHEDIVSEIQYTLDNIEDDGTFHVSRN*
JGI26118J46590_101581413300003265MarineMPDAYTLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN*
JGI26114J46594_102244023300003271MarineMPDAYTLAKQHLDXGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN*
JGI26238J51125_104073723300003478MarineVNDAYSLASKHLDSGIAEARENNVDVNAYGQALIWMLIECYKKNGRTHEDIVSEIQYTLDNIEDDGTFHVSRN*
JGI26247J51722_101040543300003588MarineVPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKXIKYSLDXINDDNTFHVSRN*
JGI26247J51722_107801423300003588MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNIND
JGI26248J51725_106820613300003589MarineVPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
Ga0055475_1004874423300003988Natural And Restored WetlandsMADAYSIAKKHLDAGIAEAADNNISINAYGQALVWKLLELYKENGRSVSDIVSEVQYTLDNIDDDGTFHVSRN*
Ga0055480_1004685113300004055Natural And Restored WetlandsADAYSIAKKHLDAGIAEAAENNISINAYGQALIWKLLEFYRENGRSVSDIVSEVQYTLDNIDDDGTFHVSRN*
Ga0055481_1020958813300004065Natural And Restored WetlandsMADAYSIAKKHLDAGIAEAAENNISINAYGQALIWKLLEFYRENGRSVSDIVSEVQYTLDNIDDDGTFHVSRN*
Ga0008648_1010142813300004110MarineVPDAYTPAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN*
Ga0066610_1005122723300004276MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
Ga0066611_1000383153300004277MarineMPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
Ga0066605_1004898033300004279MarineAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0073579_105103023300005239MarineMPDAYTLAKQHLEAGVAEAENNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
Ga0066855_1015317213300005402MarineMTNAYTLAKQHLDAGVTEAESNNIDSHAYGQALIWKVLEMYKENGRSGTDIVAEVQYTLDNLDDDGTFHVSRN*
Ga0078893_1170439943300005837Marine Surface WaterMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN*
Ga0078893_1252295113300005837Marine Surface WaterMPDAYSLAKQHLDAGVAEAADNNVDLNAYGQALVWKLIERYQESGRPNADIIEEIKYSLDNISDDNTFHVSRN*
Ga0075109_10000042193300005912Saline LakeMANAYGVAQQHLEAGIAAAAEENIDLHAYGQALIWKLIEAYQTAGRKNEDIIDEIKYSLDNIADDGTFHVSRN*
Ga0075117_108664423300005914Saline LakeQQHLEAGIAAAAEENIDLHAYGQALIWKLIEAYQTAGRKNEDIIDEIKYSLDNIADDGTFHVSRN*
Ga0075466_105300623300006029AqueousMPDAYTLAKQHLDTGIQEAAENNIELNAYGQALLWKLIERYKENGRSAADIISEIKYTLDNVEDDGTFHVSRN*
Ga0075495_147314413300006399AqueousMPDAYTLAKQHLDTGIQEAAENNIELNAYGQALLWKLIERYKENGRSAADIIDEIKYTLDNVEDDGTFHVSRN*
Ga0082250_1009434513300006465SedimentMADAYSLAKKHLDEGVAAAAAENIDLNKYGQALVWKSLELYVENGRGLKDINEEIQYTIENLGGDGIFH
Ga0031670_111547713300006715Deep OceanANAYSMALEHLEAGIKAAAEENIDLNAYGQALVWKLIEKYQEAGRSNDDIVSEIKYTLDNIADDNTFHVSRN*
Ga0075467_1066996023300006803AqueousMADAYTLAKNHLNAGIQEAAENNIDLNAYGQALVWKLIERYKESGRSAADIISEIKYTLENVDDDGTFHVSRN*
Ga0066372_1010039523300006902MarineMTDAYSLAKGHLEKCIQEAVENDIDLNTYGQALIWKLIERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN*
Ga0105055_1038820623300007519FreshwaterMTDAYTLAKQHLDVGIQEAADNNIDINAYGQALVWKLIERYKAHGRSVDDIVNEIKYTLDNVEDDGTFHVSRN*
Ga0105054_1084720423300007520FreshwaterTMTDAYTLAKQHLDVGIQEAADNNIDINAYGQALVWKLIERYKAHGRSVDDIVNEIKYTLDNVEDDGTFHVSRN*
Ga0102953_100858623300007775SoilMETDEMADAYSLAKQHLDAGIAEAAENNIDLNAYGQALVWKLLERYKEAGRTGADIVSEMQYTLDNLDDDGTFHVSRN*
Ga0102904_103397823300007981EstuarineMPDAYTLAKQHLEAGVAEASNNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN*
Ga0102887_102403833300008961EstuarineMPDAYTLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN*
Ga0104258_105164013300008993Ocean WaterMPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN*
Ga0114950_1000899963300009030Deep SubsurfaceMADAYSLAKQHLDAGLKDARKNNIDENAYGQALIWKILEMYQANGRSEKDIIDEVQYTLENLDDDGTFHVSRN*
Ga0114950_1010213123300009030Deep SubsurfaceMADAYSLAKRHLDAGVAEAATDNIDLNKYGQALMWKLLELYVENGRKPSDISDEIQYTLENLDGEGIFHVVRN*
Ga0117901_102612943300009103MarineMTNAYSLAKEHLDKCLQEATKNNIDLNTYGQALIWMLIERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN*
Ga0118723_117516023300009126MarineMTNAYSLAKEHLDKCLQEATKNNIDLNTYGQALIWMLIERYQESGRSNSDIISEIQYTLENIDDDRTFHVSRN*
Ga0118728_103132823300009129MarineMTNAYSLAKEHLDKCLQEATKNNVDLNTYGQALIWMLIERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN*
Ga0118729_1000266733300009130MarineMADAYSLAEEHLDKCIQEAADNNIDLNAYGQALIWKLIERYQAAGRPAADIISEIKFMLENIDEDGTFHVSRN*
Ga0114949_1026931723300009139Deep SubsurfaceMADAYSLAKQHLDAGVTDAKENNIDSNAYGQALIWKILEMYQANGRSGNDIVNEVQYTLENLDDDGTFHVSRN*
Ga0118716_103494923300009370MarineMTIAYSLAKEHLDKCLQEATKNNVDLNTYGQALIWMLIERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN*
Ga0115548_123676513300009423Pelagic MarineMPDAYTLAKQHLDTGIQEAAENNITLNAYGQALLWKLIERYKENGRSATDIIDEIKYTLDNVEDDGTFHVSRN*
Ga0115547_101106813300009426Pelagic MarineKQHLDTGIQEAAENNITLNAYGQALLWKLIERYKENGRSATDIIDEIKYTLDNVEDDGTFHVSRN*
Ga0115565_1022079513300009467Pelagic MarineKTQRGTKMSNAYALAEQHLEANIAAAEADNIDMNAYGQALVWKLIEAYQKAGRKNEDIISEIKYTLDNIADDGTFHVSRN*
Ga0115564_1005921323300009505Pelagic MarineMPDAYTLAKQHLDTGIQEAAENNIELNAYGQALLWKLIERYKENGRSATDIIDEIKYTLDNVEDDGTFHVSRN*
Ga0136655_109933123300010316Freshwater To Marine Saline GradientMADAYSLAKQHLDAGIKEAAENNIELNAYGQALVWKLIERYKESGRSVDDIISEIKYTLDNVDDDGTFHVSRN*
Ga0129326_143329523300012522AqueousMADAYSLAKQHLDAGIKEAAANNIELNAYGQALVWKLIERYKDSGRSADDIISEIKYTLDNVDDDGTFHVSRN*
Ga0164313_1144748823300013101Marine SedimentMADAYTIAKQNLDAGIAEAKENNVDANAYGQALFWKILEMYKENGRSGADIVSEIKYTLDNIDDDETFHVSRN*
Ga0171650_104587913300013114MarineMTNAYSLAKEHLDKCLQEATKNNIDLNTYGQALIWMLIERYQEAGRSNSDIISEIQYTLENIDDDGTFHVSRN*
Ga0171651_107697423300013115MarineMTNAYSLAKEHLDKCLQEATKNNVDLNTYGQALIWKLIERYQESGRSNSDIISEIQYTLENIDDDRTFHVSRN*
Ga0181552_1000718753300017824Salt MarshMPDAYTLAKQHLDTGIQEAAENNIELNAYGQALLWKLIERYKENGRSAADIIDEIKYTLDNVEDDGTFHVSRN
Ga0181552_1029273223300017824Salt MarshMADAYTLAKNHLNAGIQEAAENNIDLNAYGQALVWKLIERYKESGRSAADIISEIKYTLENVDDDGTFHVSRN
Ga0181587_1075716013300017968Salt MarshCVETLWRRLMADAYSLAKQHLDAGIIEAESSNISLNAYGQALVWKLIERYKDSGRNNADIISEIQYTLDNIADDGTFHVSRN
Ga0181559_1020974623300018415Salt MarshMADAYSLAKQHLDAGIIEAESSNISLNAYGQALVWKLIERYKDSGRNNADIISEIQYTLDNIADDGTFHVSRN
Ga0206125_1005577533300020165SeawaterMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN
Ga0206125_1010520023300020165SeawaterMPDAYTLAKQHLEAGVAEAENNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0206129_1023551713300020182SeawaterSFINPITTLENYMADAYSLAKQHLDAGILDAAENNVDLNAYGQALVWKLIEKYQAEGRSNKDIIEEIKYSLDNIDDDNTFHVSRN
Ga0206130_1005578023300020187SeawaterVPDAYTLAKQHLEAGVAEAENNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0212227_101128923300020234SedimentMADAYSLAKQHLEAGVTDAKENNIDSNAYGQALIWKILEMYQANGRSGNDIVNEVQYTLENLDDDGTFHVSRN
Ga0212228_100485913300020235SedimentMADAYSLAKRHLDAGVAEAATDNIDLNKYGQALMWKLLELYVENGRKPSDISDEIQYTLENLDGEGIFHVVRN
Ga0212228_100718563300020235SedimentMADAYSLAKQHLDAGLKDARKNNIDENAYGQALIWKILEMYQANGRSEKDIIDEVQYTLENLDDDGTFHVSRN
Ga0211505_100268853300020352MarineMPDAYTLAKQHLEAGVAEAETNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN
Ga0211656_1004076343300020375MarineMTNAYTLAKQHLDAGVTEAESNNIDSHAYGQALIWKVLEMYKENGRSGTDIVAEVQYTLDNLDDDGTFHVSRN
Ga0211575_1002403233300020407MarineVNDAYSLASKHLDSGIAEARENNVDVNAYGQALIWMLIECYKKNGRTHEDIVSEIQYTLDNIEDDGTFHVSRN
Ga0206686_101020233300021065SeawaterVNDAYSLASKHLDSGIAEARENNVDVNAYGQALIWMLIECYKKNGRTHEDIVSEIQYTLDNIDDDGTFHVSRN
Ga0206678_1019565923300021084SeawaterMPDAYTLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0206678_1041607113300021084SeawaterVNDAYSLASKHLDSGIAEASENNVDVNAYGQALIWMLIECYKKNGRTPEDIVNEIKYTLDNIEDDGTFHVSRN
Ga0206677_1007539523300021085SeawaterMPDAYTLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN
Ga0206679_1001961853300021089SeawaterMTNAYTLAKQHLDVGVTEAESNNIDSHAYGQALIWKVLEMYKENGRSGADIVAEVQYTLDNLDDDGTFHVSRN
Ga0206696_132388213300021334SeawaterMTNAYTLAKQHLDVGVTEAESNNIDSHSYGQALIWKVLEMYKENGRSGADIVAEVQYTLDNLDDDGT
Ga0206691_121972723300021342SeawaterMTNAYTLAKQHLDAGVTEAESNNIDSHAYGQALIWKVLEMYKENGRSGADIVAEVQYTLDNLDDDGTFHVSRN
Ga0206680_1022690833300021352SeawaterAGVTEAESNNIDSHAYGQALIWKVLEMYKENGRSGTDIVAEVQYTLDNLDDDGTFHVSRN
Ga0206123_1000885163300021365SeawaterMADAYSLAKQHLDAGILDAAENNVDLNAYGQALVWKLIEKYQAEGRSNKDIIEEIKYSLDNIDDDNTFHVSRN
Ga0206123_1012876113300021365SeawaterMPDAYTLVKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRFTKLVRSNRVLQTS
Ga0224501_1005108023300022223SedimentMSDAYTIAQKHLDSALVEAQENNISNNAMGQALIWKALEMYKKEGRSTKDIVQEVQYSLDNLDDDNTFHVSRN
Ga0224501_1005165343300022223SedimentMADAYSIAQKYLEAAISEANENNVTGNALGQALIWKVLEMYKKDGRSTGDIVEEVQYSLDNLDDDNTFHVSRN
Ga0222645_13037113300022833Saline WaterMTDAYTLAQQHLDAGIQDAADNNVDLNAYGQALVWKLIERYKSEGRSVDDIVSEIKYTLDNVEDDGTFHVSRN
Ga0222654_1000035603300022836Saline WaterMANAYGVAQQHLEAGIAAAAEENIDLHAYGQALIWKLIEAYQTAGRKNEDIIDEIKYSLDNIADDGTFHVSRN
Ga0255773_1017007613300022925Salt MarshDMADAYTLAKNHLNAGIQEAAENNIDLNAYGQALVWKLIERYKESGRSAADIISEIKYTLENVDDDGTFHVSRN
Ga0255758_1031414223300022928Salt MarshMADAYTLAKNHLNAGIQEAAENNIDLNAYGQALVWKLIERYKESGRSAADIISEIKYTLENVDDDGTF
(restricted) Ga0233427_1004326223300022933SeawaterHLDSGIAEASENNVDVNAYGQALIWMLIECYKKNGRTPEDIVNEIKYTLDNIEDDGTFHVSRN
(restricted) Ga0233432_1018815433300023109SeawaterLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0222664_100975533300023296Saline WaterMANAYGLAQQHLEAGIAAAAEENIDLHAYGQALIWKLIEAYQAAGRKNEDIIDEIKYSLDNIADDGTFHVSRN
Ga0256751_101761913300023442Hydrothermal Fe-Rich MatMADAYSLAKAHLEKGVSEAKENNIDANAYGQALIWKVLEMYQANGRSGSDIVSEVQYTLENLDDDGTFHVSRN
Ga0209987_1004846723300024060Deep SubsurfaceMADAYSLAKQHLDAGVTDAKENNIDSNAYGQALIWKILEMYQANGRSGNDIVNEVQYTLENLDDDGTFHVSRN
(restricted) Ga0233443_102315743300024324SeawaterMPDAYTLAKQHLEAGVAEASNNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
(restricted) Ga0233434_103544623300024327SeawaterMPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0208903_107539813300025502Saline LakeQQHLEAGIAAAAEENIDLHAYGQALIWKLIEAYQTAGRKNEDIIDEIKYSLDNIADDGTFHVSRN
Ga0209054_103270413300025656MarineDAYTLAKQHLEAGVAEASNNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0209663_106649623300025672MarineMPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN
Ga0209661_100739333300025700MarineVPDAYTPAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0209044_111468023300025709MarineMPDAYTLAKQHLEAGVAQAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRN
Ga0209660_101753713300025722MarineVPDAYTLAKQHLEAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDNTFHVSRN
Ga0209558_113220623300025729MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVS
Ga0210122_111669113300025799Natural And Restored WetlandsMADAYSIAKKHLDAGIAEAADNNISINAYGQALVWKLLELYKENGRSVSDIVSEVQYTLD
Ga0210123_102194623300025823Natural And Restored WetlandsMADAYSIAKKHLDAGIAEAAENNISINAYGQALIWKLLEFYRENGRSVSDIVSEVQYTLDNIDDDGTFHVSRN
Ga0209631_1001284553300025890Pelagic MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNINDDNTFHVSRFTFHEISPIQPRAAN
Ga0209425_1016093833300025897Pelagic MarineMPDAYTLAKQHLEAGVAEAENNNVDLNAYGQALVWKLIERYQESGRSNADIIKEIKYSLDNINDDN
Ga0209919_101479823300026196SoilMADAYSLAKQHLDAGIAEAAENNIDLNAYGQALVWKLLERYKEAGRTGADIVSEMQYTLDNLDDDGTFHVSRN
Ga0208174_102976923300027243EstuarineMPDAYKLAKQHLDAGVAEAANNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN
Ga0208965_105633823300027406MarineGIAEASENNVDVNAYGQALIWMLIECYKKNGRTPEDIVNEIKYTLDNIEDDGTFHVSRN
Ga0208950_100413543300027413MarineMPDAYTLAKQHLEAGVAEAATNNVDLNAYGQALVWKLIERYQESGRSNTDIIKEIKYSLDNINDDNTFHVSRN
Ga0209019_114837923300027677MarineMTDAYSLAKGHLDKCIQEAVENDIDLNTYGQALIWKLIERYQESGRSNSDIITEIQYTLENIDDDGTFHVSRN
Ga0209752_105433313300027699MarineDAYSLAKGHLDKCIQEAVENDIDLNTYGQALIWKLLERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN
Ga0257126_112300923300028287MarinePVNDAYSLASKHLDSGIAEARENNVDVNAYGQALIWMLIECYKKNGRTHEDIVSEIQYTLDNIEDDGTFHVSRN
Ga0307488_1001242323300031519Sackhole BrineMTDAYTLAKQHLDTGIQEAADNNVDLNAYGQALVWKLIERYKAEGRSVNDIVGEITYTLENVEDDGTFHVSRN
Ga0307488_1005483133300031519Sackhole BrineMADAYSLAKQHLDAGIKEAAENNIELNTYGQALVWKLIERYKESGRSADDIINEIKYTLDNVDDDGTFHVSRN
Ga0307488_1008404923300031519Sackhole BrineMTDAYTLAKQHLDTGIQEAADNNVDLNAYGQALVWKLIERYKAEGRSVNDIVSEITYTLENVEDDGTFHVSRN
Ga0307492_1000288763300031523Sea-Ice BrineMTDAYALAKLHLDTGIQEAADNNVDLNAYGQALVWKLIERYKAEGRSVNDIVSEIKYTLDNVEDDGTFHVSRN
Ga0307492_1004531223300031523Sea-Ice BrineMTDAYTLAKQHLDAGIQEAADNNVDLNAYGQALVWKLIERYKVEGRSVNDIVGEITYTLENVEDDGTFHVSRN
Ga0307985_1015345423300031629MarineMVDAYTLAKQHLDINIKDAEAQNIDLNAYGQALIWKLLERYKESGRSTKDIVDEVKYTLENIQDDDTFHVSRN
Ga0326597_1176526413300031965SoilMADAYSLAKKHLDAGVADAARNNIDLNAYGQALVWKLLELYKEKGRTNADITSEVQYTLDNLDDDGTFHVSRN
Ga0315339_109701513300032134SeawaterMTNAYSLAKQHLVAGVTEAKNNNIDSHAYGQALIWKVLEMYKDNGRSGADIVAEVQYTLDNLNDDDT
Ga0316202_1003770623300032277Microbial MatMADAYSLAKQHLEAGIAEAAENNVDLNAYGQALVWKLIERYQESGRSNADIIEEIKYSLDNIDDDNTFHVSRN
Ga0310345_1081927723300032278SeawaterMTDAYSLAKGHLDKCIQEAVENDIDLNTYGQALIWKLIERYQESGRSNSDIISEIQYTLENIDDDGTFHVSRN
Ga0310345_1140313113300032278SeawaterTDAYSLAKEHPDKGILEAADNNIDLNTYGQALIWKLIQHYQESGRSNSDIVSEIQYTLGNIEDDGTFHVSRN
Ga0315334_1010166023300032360SeawaterMTDAYSLAKEHPDKGILEAADNNIDLNTYGQALIWKLIEHYQESGRSNSDIVSEIQYTLENIEDDGTFHVSRN
Ga0310342_10060587823300032820SeawaterMTDAYSLAKEHLDKGILEASDNNIDLNTYGQALIWKLIEHYQESGRSNSDIVSEIQYTLENIEDDGTFHVSRN
Ga0214472_1089903323300033407SoilMTDAYGLAKQHLDNNIAEAAQHNISLGAYGQALVWKLIERYKAEGRTAKDIVAELQYTLDNIDDDGTFHVSRN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.