NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071294

Metagenome / Metatranscriptome Family F071294

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071294
Family Type Metagenome / Metatranscriptome
Number of Sequences 122
Average Sequence Length 75 residues
Representative Sequence VEIKLNASPEDGLLTGKVVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARTVSVGDLVMVERGRNKAI
Number of Associated Samples 107
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.97 %
% of genes near scaffold ends (potentially truncated) 97.54 %
% of genes from short scaffolds (< 2000 bps) 91.80 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.574 % of family members)
Environment Ontology (ENVO) Unclassified
(28.689 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.557 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.88%    β-sheet: 25.24%    Coil/Unstructured: 70.87%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VEIKLNASPEDGLLTGKVVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARTVSVGDLVMVERGRNKAISequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Watersheds
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Arctic Peat Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Bog Forest Soil
Soil
Permafrost
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Fen
Palsa
4.1%3.3%5.7%3.3%4.9%6.6%5.7%4.9%15.6%4.9%9.8%3.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12659J15293_1006366823300001546Forest SoilLESQTHTLPANGLLTGKLVHLALPVRWSLMGQEGRGAAEMACTYDIHPHGARLLSSRVVNIGDLVVVERGRN
JGI12635J15846_1002942513300001593Forest SoilLESETNTPPREELLSGKMVHLALPVRWSLVEERGRRGPVEMGCTYDIHPRGARLTGSREMNAGDLLLVERGRNKAM
JGIcombinedJ26739_10104647413300002245Forest SoilMLMGKLVHLAIPVRWSLVEQNRRGPVEMACTYDIHPHGARLLGSRKVKVGDLVMVERGRNKALCQVVWTGPR
JGI25615J43890_106199213300002910Grasslands SoilVEHKTNTPPEDAMLMGKLVHLAIPVRWSLVEQNRRGPVELACTYDIHPRGARLLGSRKVKVGDLVMVERGRNKALCQVVWTGPRDSQLRGQF
Ga0062386_10026780023300004152Bog Forest SoilLEHSHHKPPENSLLTGKVVHAALPVRWSLAAQEGRGLVEMACTYDIHPHGARLVSAREVNLGDLVLVERGRNKAICQVVWTAD
Ga0066680_1022381233300005174SoilMAVKHKPNASQADGLLMGKMLHLALPVRWSLVGQDGRGPLEMACTYDIHPRGARLLGGHDLSLGDLVMVERG
Ga0070711_10053174323300005439Corn, Switchgrass And Miscanthus RhizosphereVGNKIHTAEDGLLTRKVVHLALPVRLSLAGQDGRGTETACTYDIHPHGARLVSTRSVNAGDLIVVERGRHKA
Ga0070707_10150677223300005468Corn, Switchgrass And Miscanthus RhizosphereVQSKFNTSPEDGLLTGKLVHLALPVRWSLVGGARGAVETACTYDIHPRGARLLSARDLNIGDLVMIERG
Ga0070734_1003936043300005533Surface SoilLESKPNATPEDGLLTGKVVHLALPVRWSFVGQEGRGAAEMACTYDIHPNGARLLSSRPVNVGDLVMVERGRNKAICQVVWSADR
Ga0070734_1052281413300005533Surface SoilVGNTSNLPEDGLLTRKMVHLALPVRWSLVGQEGRGSAEVACTYDIHPQGARLVSSRDVNVGD
Ga0070732_1058493213300005542Surface SoilLQTKNPLSPEPGLLGGKRVHLALPVRWSLIGQEGRGVAETACTYDIHPHGARLLTTRLVNIGDMVL
Ga0066789_1006959333300005994SoilLENKPNTSPEAGLMTGKVVHLALPVRWSLVGQEGRGTAEMACTYDIHPHGARLLSARQVKVGDLVMVERGRNKAVCQVVWAGDPASPLR
Ga0070717_1158077723300006028Corn, Switchgrass And Miscanthus RhizosphereLATQYNPENGLLMAKLVHLAVPVRWSLVGQEGRGSVEMACTYDIHPHGARLVSSREAHVGDLVMVERGRNK
Ga0075029_10033660723300006052WatershedsVPSKSNASPEDGLLTTKLVHLALPVRWTLIGQEGRSAPEMACTYDIHPHGARLLSSRDLNIGDLVTV
Ga0075029_10076199023300006052WatershedsVRSILESKPNPSPEAGLLTGKVVHLALPVRWSLVGQEGRGAAEMACTYDIHPHGARLLSARQVNVGDLV
Ga0075021_1064251123300006354WatershedsLEIRPNMPEPEGMPNGKLIHLALTVRWSLVGEECRGPVEVACTYDIHQHGARLLSSRAPNVGDLVLVERGRN
Ga0073928_1048744913300006893Iron-Sulfur Acid SpringLQSKTNSSPADGLLTAKLVHLALPVRWSLVGQEGGGPAEMACTYDSHSHGARLLGSRQVNLGDL
Ga0099794_1071021223300007265Vadose Zone SoilMAVQNKPNASQADGLLMGKMVHLALPVRWSLVGQDGRGPLEMACTYDIHPRGARLLGGHELSLGDLVMVERGRNKALCQVVWTADPGSQLAG
Ga0099827_1150429823300009090Vadose Zone SoilMAVQNKPNASQAHGLLMGKMVHLALPVRWSLVGQDGRGPLEMACTYDIHPRGARLLGGRDLSLGDLVMVERGRNK
Ga0116218_129381823300009522Peatlands SoilLERKTNTQQDGLLTGKVVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARHVNPGDLVMVERGRNK
Ga0116113_100933443300009638PeatlandVENKLNASPEDGLLTGRAVHLALPVRWSLVGQQGRGPTEMACTYDIHPHGARLLSAREVHVGDLVMVERGRNKAVCQVVWAGDP
Ga0116224_1023107023300009683Peatlands SoilLESTTNTSLENGLLTGKLVHLALPVRWTLVAQEGRGPAEIACTYDIHPHGARLLSSREVSIGDLVMVERG
Ga0116223_1089788513300009839Peatlands SoilMESTSNPASEDGLLTGKVVHLALPVRWSLVGQEGRGQAEMACTYDIHPHGARLLSARPVNVGD
Ga0126373_1203739823300010048Tropical Forest SoilLNIPPEDGLLTTKLVHLALPVRWSLVGQEGRGAQEMACTYDVHPNGARLLSARDVNIGDLVMIERGRNKAICQVVWSGDPTSELRGQF
Ga0074044_1087413923300010343Bog Forest SoilLKRKINPQEDGLLTGKVVHLALPVRWSLVGQEGRGAAEMACTYDIHPHGARLVSAREVSIGDLVMVERGRNKAIC
Ga0126372_1052936233300010360Tropical Forest SoilMIVDDTPTMSRADGRLTTKVIHLALPVRWALIGQESRSAPQTACTYDVHSQGARLVSSRALNTGDLIMVERGRNKAICQVVWSADP
Ga0126378_1041738713300010361Tropical Forest SoilVRNNSNLPEDGLLTRKLVHLALPVRWSFVGQEGRGSAEVACTYDIHPQGARLVGSRDVNIGDLVLVERGRNKAICQVVW
Ga0126381_10259187723300010376Tropical Forest SoilVGNKIHTAEDGLLTRKVVHLALPVRWSLAGQDGRAAEVACTYDIHPHGARLVGTRPLNIGDLILVERGRNKTMCQVVWSADPA
Ga0126381_10326667623300010376Tropical Forest SoilLNIPPEDGLLTTKLVHLALPVRWSLVGQEGRGAQEMACTYDVHPNGARLLSARDVNIGDLVMIERGRNKAIC
Ga0126383_1176518013300010398Tropical Forest SoilVRGIRKLSTDDALLTTKIVHLALPVRWTLMNGEGRHAQEMACTYDIHPHGARLVSSRDLNVGDL
Ga0137378_1116169913300012210Vadose Zone SoilLQIKTKASPESGLLTGKMIHLALPVRWSLVRQEGRGPAEVACTYDIHPRGARLLSTREVHVGDLV
Ga0137377_1077317613300012211Vadose Zone SoilVQSKFNRSPEDGLLTGKLVHLALPVRWNLVGGARGAMETACTYDIHPRGARLLSGRDLNIGDL
Ga0137366_1093004713300012354Vadose Zone SoilMENTDKRLSEDELLRGKMVHLALPVRWSLIGPQGRGPVEIACTYDVHLQGARLLGGHGLHLGDRVMMERGRSKAICQVTWIADPDSSLRGQFS
Ga0137390_1112392623300012363Vadose Zone SoilLEHKTHTPPEDAMLMGKLVHLALPVRWSPVDENRRGPVELACTYDIHPRGARLLGSRRVKVGDLV
Ga0181532_1018803513300014164BogLERKTNTQENGLLTGKLVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARQVNPGDLVMVQRGRNKAICQVVWAGDPSSPLR
Ga0181534_1016179013300014168BogLEIKFKTSREEGLLTNKLVHLALPVRWSLVGEDGRGPAEMACTYDIHPHGARLLSSSGVNIGDLVMVERGRNKAVCQVVWTADPESPLRGQ
Ga0182024_1148401323300014501PermafrostMETNTTSQSALLTGKLVHLAIPVRWSLVGQEGRGPAEIACTYDIHPQGARLVSSRHVNVGDMVMVERGRNKAVCQVVWAADP
Ga0181519_1012811033300014658BogVVHVALPVRWSVIGQPGRGSAEVACTYDIHRHGARLLSSREVSPGDLMLVERGRNKAICQVVWAGDP
Ga0182038_1181090923300016445SoilMRDFDVASTPKTTPEHGLLTGKVVHLVVPVRWSLVGQEGRAVQETACTYDIHPQGARLVSSRDVNIGDLVMVERGRNKAICQVVWS
Ga0187802_1001114043300017822Freshwater SedimentMPSELRTGKIIHLALPVRWSLAGQEGRGSTEVACTYDIHAHGARLLSLRPASLGDLLILERGRNRALCQVVWTADPASTLRG
Ga0187818_1014301623300017823Freshwater SedimentVQQRSNPSHEDGLLTTKLVHLALPVRWTLVGQEGRGTPEMACTYDIHPHGARLLSARDLNIGDLVMVERG
Ga0187820_117669023300017924Freshwater SedimentLDHKTNTSSENGLLTGKLVHLALPVRWSLVAQQGRGPAEIACTYDIHPRGARLVSAREVNVGDLVMV
Ga0187801_1033871313300017933Freshwater SedimentVQQRSNPSHEDGLLTTKLVHLALPVRWTLVGQEGRGTPEMACTYDIHPHGARLLSARDLNIGDLVMVERGRNKAICQVVWSADPA
Ga0187808_1061482113300017942Freshwater SedimentVQQRSNPSHEDGLLTTKLVHLALPVRWTLVGQEGRGTPEMACTYDIHPHGARLLSARDLILATWLWWNADATR
Ga0187781_1121942013300017972Tropical PeatlandMDSKVTATPEQAFLTGKLVHLAMPVRWSLVGQDGRGPVGNACTYDIHPRGARLSGSGEIKIGDMVLIERGRNKAICQVIWTADR
Ga0187816_1040263713300017995Freshwater SedimentLASHTKTSPQSSLLTGKVVHLALPVRWSLVGQDGRGPAEMACTYDIHPRGARLVATRAVNVGDLVMVERGRNK
Ga0187810_1036958123300018012Freshwater SedimentLESTSNTATEDGLLTSKVVHLALPVRWSLVGQEGRGQPEMACTYDIHPHGARLLSARQVNVGELVMVERGRNKAICQVVWA
Ga0187863_1002061943300018034PeatlandLEIKFKTSREEGLLTSKLIHLALPVRWSLVGEDGRGPVEMACTYDIHPHGARLLSSGGVSIGDLVMVERGRNK
Ga0187862_1020818323300018040PeatlandLKRKINPQEDGLLTGKVVHLALPVRWSLVGQEGRGAAEMACTYDIHPHGARLVSAREVNIGDLVLVER
Ga0187887_1038203723300018043PeatlandLESKFNTSPEEGLLTSKLVHLALPVRWSLVGEEGRGPAEMACTYDIHPHGARLLSSRDVNIGDLVMVERGR
Ga0187859_1019840813300018047PeatlandLKRKINPQEDGLLTGKVVHLALPVRWSLVGQEGRGAAEMACTYDIHPHGARLVSAREVNLGDLVMVERGRNKAICQVVWAGD
Ga0187859_1084176813300018047PeatlandLERKSNTPPQEGLLSGKLVHLALPVRWSLVEERGRGPVEMVCTYDIHPRGARLNGSREMNAGDLVLVERGR
Ga0187771_1057227223300018088Tropical PeatlandLERRTNTSSENGLLTGKLVHLALPVRWSLVGQEGRSAAEFACTYDIHPHGARLLGTRDVSVGDLVMVERGRSKAVCQVIWTADPASAL
Ga0182025_105654833300019786PermafrostMECKINPVAENGLLSGKLVHLALPVRWSLIGREGRGPAELACTYDIHPRGARLLSSRAVNMGDMVLVER
Ga0193726_138410413300020021SoilVEHNTNTPLEDGLLTGKVVHLALPVRWSPVGQEGRGMAEMACTYDIHPHGARLLSARQVNVGDLVTV
Ga0215015_1080433823300021046SoilVEHKTNTSPEDAMLMGKLVHLAIPVRWSLVEQNRRGPVELACTYDIHPRGARLLGSRKVQVGDLVMVERGRNLSLIHISEPTRPLYISYA
Ga0210404_1031256913300021088SoilMREAVVQSQTNTSSEDGLLTGKMVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSAREVNVGDLVMVERGRNKAICQVVWAGDPSSTLR
Ga0210406_1014771913300021168SoilMENKSNPPIQEGQRPGKLVHMAIPVRWSPVAQKGRGATETACTYDIHPRGARLLGGREVNVGELLLIERGRNKAVCQ
Ga0210400_1007019813300021170SoilVNHPIKASPESGLLTGKVVHLALPVRWSLVGQEWRGPAEMACTYDIHPHGARLLSARSVNVGDLVMVERGRNKAI
Ga0210400_1019171613300021170SoilLERKANSQEDGLLTSSVVHLALPVRWSLVGQEGRGPVEMACTYDIHPHGARLLSAREVNIGDLVMV
Ga0210405_1009370333300021171SoilLERKTNTPPQDGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLTGSREMNAGDLVLVERGRNKAV
Ga0210408_1047232923300021178SoilVHLALPVRWSFVDRERGGAEAACTYDIHPRGARLVGGRDVNVGDLLMVERGRNKAICQVVWAADPV
Ga0210396_1017315843300021180SoilVQSQFNTSPEDGLLTGKLVHLALPVRWSLVGETRGAVETACTYDIHPRGARLLSGRNLNLGDLVMIERG
Ga0210393_1016515933300021401SoilLERKTNTPPQDGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLTGSREMNAGDLVLVERG
Ga0210385_1056692213300021402SoilVEIKLNASPEDGLLTGKVVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARTVSVGDLVLVERGRNKAICQVVWSGDPSSPLRG
Ga0210387_1033042523300021405SoilLQSKFNTSPEDGLLSGKLVHLALPVRWSLVGETRGAVETACTYDIHPRGARLLSGRDLSVGDLVMI
Ga0210383_1064141923300021407SoilLERKTNTPPHDGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLTGSREMNAGDLVLVERGR
Ga0210402_1001799163300021478SoilMREAVVQSQNNTPPEDALLTGKVVHLALPVRWSLVGQEGRGTAEMACTYDIHPHGARLLSAREVNLGDLVMVERGRNKA
Ga0210402_1026726933300021478SoilVQSNSNAPEDGLLTRKIVHLALPVRWSLVGQDGRSIETACTYDIHPHGARLVSSRDVNAGDLVLVERGRNKAICQVIWSADPD
Ga0210402_1033212613300021478SoilVQSQFNTSPEDGLLTGKLVHLALPVRWSLVGETRGAVETACTYDIHPRGARLLSGRNLNLGDLVMIE
Ga0210409_1027779313300021559SoilMESTSNTGTEDGLLTSKVVHLALPVRWSLVGQEGRGQAEVACTYDIHPHGARLLSARQVNVGELVMVERGRNKAICQVVWA
Ga0126371_1168953613300021560Tropical Forest SoilVGTNLKAAPLDGLLTTKLVHLALPVRWTLIGQERRRAPEMACTYDVHPQGARLLGSRDLSVGDLVMIERGRNKAICQVVWSAEPNSV
Ga0126371_1170830413300021560Tropical Forest SoilVRGIRKLSTDDALLTTKIVHLALPVRWTLMNGEGRHAQEMACTYDIHPHGARLVSSRDLNVGDLVMVERGRNKA
Ga0213853_1020347023300021861WatershedsLENKNHTEDGLLTGKLVHVAIPVRWSLFGQEGRRSAEVACTYDIHPRGARLLGTRAVHCGDVVAVE
Ga0213853_1143089013300021861WatershedsLENKNHTEDGLLTGKLVHVAIPVRWSLFGQKGGRSAEMACTYDIHPRGARLLGTRAVNCGDVVVVERG
Ga0224562_100776623300022733SoilLERKTNTPPQDGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLTGSREMNAGDLVLVERGRNKAVCQVVWTGDRNSD
Ga0224545_101706323300022881SoilMECKINPVAENGLLSGKLVHLALPVRWSLIGREGRGPAELACTYDIHPRGARLLSSRAVNMGDMVLVERGRNKAIC
Ga0208935_102225823300025414PeatlandLKRKINPQEDGLLTGKVVHLALPVRWSLVGQEGRGAAEMACTYDIHPHGARLVSAREVNIGDLVLVERGRN
Ga0208034_108495613300025442PeatlandLQSKTNPSAEDGLLTGKRVHLALPVRWSLIGEEGRGPAEMACTYDIHPRGARLLSAREVNIGDMVMVE
Ga0208848_112407713300025509Arctic Peat SoilVEIKLNASPEDGLLTGKVVHLALPVRWSLVGQEGRGPAEMACTYDIHPHGARLLSARTVSVGDLVMVERGRNKAI
Ga0208691_101672633300025612PeatlandVENKLNASPEDGLLTGRAVHLALPVRWSLVGQQGRGPTEMACTYDIHPHGARLLSAREVHVGDLVMVERGRNKAVCQV
Ga0207646_1005328713300025922Corn, Switchgrass And Miscanthus RhizosphereMLMGKLVHLAIPVRWSLVEQNRRGPVEWACTYDIHPRGARLLGSRKVKVGDLVMVERGRNKALCQVVW
Ga0209732_101843113300027117Forest SoilMETNTNVTSQSALLTGKLVHLAIPVRWSLVGQEGRGPVEIACTYDIHPQGARLVSSRHVNVGDMVMV
Ga0209008_115120813300027545Forest SoilLESQTHTLPANGLLTGKLVHLALPVRWSLMGQEGRGAAEMACTYDIHPHGARLLSSRVVNIGDLVVVERGRNKAICQVIWAG
Ga0208984_111334913300027546Forest SoilMREPILDYKTNTPPEDAMLMGKLVHLALPVRWSPVEQNRRGPVEMACTYDIHPRGARLLSSRRVKVGDLV
Ga0209735_113622213300027562Forest SoilLQTKTKQSSEAGLLTGKLVHLALPVRWSPIGQERRGPAEMACTYDIHPHGARLLGTREVNIGDMVMVERGRNKAVCQVVWAADAASELR
Ga0209003_111652813300027576Forest SoilVPSNPNLSPKDGLLTTKLVHLALPVRWTLIGQEGRGAPEMACTYDIHPHGARLLSSRDLNIGDMVM
Ga0208827_118022213300027641Peatlands SoilLEDETRTESGLLTGKMVHLALPVRWSPVAQQGRGTAEMACTYDIHPHGARLLSAREVSVGDLVMVERGRHKAICQVVW
Ga0209007_112842433300027652Forest SoilLESKTHTLPENGLLAGKLVHLALPVRWSLMGQEGRGAAEMACTYDIHPHGARLLSSRVVNIGDL
Ga0209007_112910113300027652Forest SoilLESQTHTLPANGLLTGKLVHLALPVRWSLMGQEGRGAAEMACTYDIHPHGARLLSSRVVNIGDL
Ga0209736_111652913300027660Forest SoilLRSKTNSSPEDGLLAAKLVHLALPVRWSVIGQEGRGPTETACTYDIHPHGARLLGSRQVNLGDL
Ga0208565_119940913300027662Peatlands SoilLESHTNTSPQASLLTGKVVHLALPVRWSFVGREGRGAAEMACTYDIHPRGARLLATRAVSVGDLVMVERGRNKAVCQVVWTADPR
Ga0209448_1026532713300027783Bog Forest SoilLENKNQTEDGLLTGKLVHVAIPVRWSLFGQEGRRAAEMACTYDIHPRGARLLGTRAVNCGDVVVVE
Ga0209139_1031217323300027795Bog Forest SoilMIFLKRSEVILQSKTNTPPQEGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLVGTRQMHAGDLV
Ga0209060_1012424113300027826Surface SoilLESKPNATPEDGLLTGKVVHLALPVRWSFVGQEGRGAAEMACTYDIHPNGARLLSSRPVNVGDLVMVERGRNKAICQVVWSADRE
Ga0209060_1045402413300027826Surface SoilMSSEERLLTGKIIHLALPVRWSLAGQEGRGSTETACTYDIHAGGARLLSARPANVGDLILVERGRNKALCQVVWAGDPASVLRGQFA
Ga0209580_1003991533300027842Surface SoilLQKEIQIAEGLLTGKLVHLALPVRWSVVGHDGRGPIEMGCTYDIHPRGARLVGTRAVNLGDLLMVERGRNRALCQVTWAG
Ga0209167_1065814313300027867Surface SoilLEHKTNTSSENGLLTGKLVHLAIPVRWSPVGQEGRGPVETACTYDIHPHGARLVSAREVNIGDLVMIERGRNKAICQVVWTADPAS
Ga0209067_1029357123300027898WatershedsVQQNSNSSQEDGLLTTKLIHLALPVRWTLIGQEGRGAPEMACTYDIHPHGARLLSSRDLNIGDLVMVERGRNKAICQVVWSA
Ga0209526_1033142423300028047Forest SoilMLAAVGLAQKRVILDHKTNTPQDAMLMGKLVHLALPVRWSLVEQNRRGPVEMACTYDIHPRGARLLSSRRVK
Ga0302225_1060879923300028780PalsaLERKTNTPPQEGLLSGKLVHLALPVRWSLVEERGRGPVEMACTYDIHPRGARLTGSREMNAGDLVLVERGRNKAMCQVVWTG
Ga0311349_1097372413300030294FenMREIGLENKANTPPQDGLLTGKLVHLAIPVRWSPVAQQGRVPAEMACTYDIHPHGARLVSAREVNIGDLVMIER
Ga0311353_1158459123300030399PalsaLASTVDTSINPASENGSLTERLIHLAIPLRWSLVGRDGRGTTEMACTYDIHPHGARLVSTRGVNIGDLVMVERGRNKAVC
Ga0302183_1040764813300030509PalsaVETKLNASPEDGLLTGKAVHLALPVRWSLVGQQGRGPSEMACTYDIHPHGARLLSARTVNLGDLVMVERGRNKAICQVVWA
Ga0075384_1000309813300030841SoilMREAGLKSKIKASPEDGLLTGKVVHLALPVRWSLAGQEGRGPVEMACTYDIHPRGARLLSARAVNVGDLVVVERGRNKAICQVVWAGDPD
Ga0075384_1060078823300030841SoilVQKKLNPQEDGLLTGKVVHLAIPVRWSPVGMAGRAALEMACTYDIHPRGARLLSSRAVNVGDLILVERGRNKAICQVV
Ga0170823_1574299913300031128Forest SoilMREAGLKSKIKASPEDGLLTGKVVHLALPVRWSLAGQEGRGPVEMACTYDIHPRGARLLSARAVNV
Ga0170824_10230717033300031231Forest SoilMREARLRSKIKASPEDGLLTGKVVHLALPVRWSLAGQEGRGPVEMACTYDIHPRGARLLSARAVNV
Ga0170824_11781720213300031231Forest SoilVQKKLNPQEDGLLTGKVVHLAIPVRWSPVGVGGRASVEMACTYDIHPRGARLLGSRPVNVGDLVLIERGRNKAICQ
Ga0307474_1025852023300031718Hardwood Forest SoilLHSKTNPSPEDGLLAAKLVHLALPVRWSLIGQEGRTPAEMACTYDIHQQGARLVGSRQVNLGDLVMVER
Ga0307474_1045587113300031718Hardwood Forest SoilMREEGLKNKIRTSPENGLLTGKVVHLALPVRWSLVGQEWRGPAEMACTYDIHPHGARLLSARSVNVGDLVMVERGRNKAICQVV
Ga0307468_10227367313300031740Hardwood Forest SoilMRETGLESKPNTATEDGLLMGKLVHLALPVRWSLVGQEGRGPAEMACTYDIHPRGARLVGGREVSVGDLVTVERGRNKALCQVVWA
Ga0318546_1031608213300031771SoilMRDFDVASTPKTTPEHGLLTGKVVHLVVPVRWSLVGQEGRAVQETACTYDIHPQGARLVSSRDVNIGDLVMVERGRNKAICQVVW
Ga0307478_1036919413300031823Hardwood Forest SoilMREMGHPPRDFSLRSEFNTSPEDGMLAGKLVHLALPVRWSLVGQSRGPIEMACTYDIHPHGARLLSWRGSSTGLTVGDLIMIERGRSKSLCQVVWTADPDS
Ga0307478_1170980713300031823Hardwood Forest SoilLSSLNKPSPNDGLLAGKLVHLALPVRWSLIGQEGRGLAEMACTYDVHAQGARLLGTRQVNVGDMVMVERGRNKAICQVVW
Ga0306919_1134222423300031879SoilVASTPKTTPEHGLLTGKVVHLVVPVRWSLVGQEGRAVQETACTYDIHPQGARLVSSRDVNIGDLVMVE
Ga0307479_1083934513300031962Hardwood Forest SoilVKNTTNTPQEDGLLMGKLVHLALPVRWSLVGQEGRGPVELACTYDIHPRGARLLGGTKVNIGDLVM
Ga0318563_1022579113300032009SoilVASTPKTTPEHGLLTGKVVHLVVPVRWSLVGQEGRAVQETACTYDIHPQGARLVSSRDVNIGDLVM
Ga0311301_1089182613300032160Peatlands SoilLQSKFNTSPEDGLLTGKLVHLALPVRWSLVGEGRGAVETACTYDIHPRGARLVSARNLSIGDMVMIERGRG
Ga0306920_10118998123300032261SoilMRDFDVASTPKTTPEHGLLTGKVVHLVVPVRWSLVGQEGRAVQETACTYDIHPQGARLVSSRDVNIGDLVMVERG
Ga0335076_1143590823300032955SoilLSQGSNSLSPYLASKLVHLALPVRWSVVGQEGRPEWGCTYDIHPNGARLLSTRDLNVGDMVTVERGRNRAICQVVWSADPSSPLRGQ
Ga0335077_1064168413300033158SoilVGKRINIAEDGLLTRKLVHLALPVRWSLAGQEGRGTEMACTYDIHPHGARLVGSRSANVGDLVLVERGRHKAMCQVVW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.