Metagenome Family F071400

Basic Information
Family ID	F071400
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	77 residues
Representative Sequence	VSTGHIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ
Number of Associated Samples	48
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.05 %
% of genes near scaffold ends (potentially truncated)	25.41 %
% of genes from short scaffolds (< 2000 bps)	88.52 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Unclassified (77.049 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (39.344 % of family members)
Environment Ontology (ENVO)	Unclassified (54.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.738 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.50% β-sheet: 32.04% Coil/Unstructured: 51.46%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
e.8.1.9: Influenza virus PB1	d4wsbb_	4wsb	0.73366
d.128.1.5: GatB/GatE catalytic domain-like	d2f2ab2	2f2a	0.6987
d.58.19.1: Bacterial exopeptidase dimerisation domain	d1cg2a2	1cg2	0.69609
d.58.57.1: Transposase IS200-like	d2vjva1	2vjv	0.69247
d.128.1.0: automated matches	d4lnoa2	4lno	0.69028

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00072	Response_reg	36.07
PF02518	HATPase_c	4.10
PF01588	tRNA_bind	1.64
PF00773	RNB	0.82
PF14319	Zn_Tnp_IS91	0.82
PF00248	Aldo_ket_red	0.82
PF04493	Endonuclease_5	0.82
PF00512	HisKA	0.82
PF08447	PAS_3	0.82
PF03404	Mo-co_dimer	0.82
PF00144	Beta-lactamase	0.82
PF04542	Sigma70_r2	0.82
PF00174	Oxidored_molyb	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0073	tRNA-binding EMAP/Myf domain	Translation, ribosomal structure and biogenesis [J]	1.64
COG2517	Predicted RNA-binding protein, contains C-terminal EMAP domain	General function prediction only [R]	1.64
COG0557	Exoribonuclease R	Transcription [K]	0.82
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.82
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.82
COG1515	Deoxyinosine 3'-endonuclease (endonuclease V)	Replication, recombination and repair [L]	0.82
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.82
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.82
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.82
COG4776	Exoribonuclease II	Transcription [K]	0.82
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
All Organisms	root	All Organisms	22.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
cellular organisms	root	All Organisms → cellular organisms	22.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.10 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.10 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_107602704	Not Available	551	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10021931	Not Available	1750	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10134082	Not Available	601	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1071986	Not Available	609	Open in IMG/M
3300000956\|JGI10216J12902_117708961	Not Available	621	Open in IMG/M
3300004281\|Ga0066397_10173867	Not Available	507	Open in IMG/M
3300004633\|Ga0066395_10022273	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300004633\|Ga0066395_10355086	Not Available	815	Open in IMG/M
3300005295\|Ga0065707_10215115	Not Available	1244	Open in IMG/M
3300005332\|Ga0066388_100026358	All Organisms → cellular organisms → Bacteria	5308	Open in IMG/M
3300005332\|Ga0066388_100506542	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300005332\|Ga0066388_100648106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300005332\|Ga0066388_101306048	All Organisms → cellular organisms → Bacteria → Acidobacteria	1251	Open in IMG/M
3300005332\|Ga0066388_101477740	Not Available	1187	Open in IMG/M
3300005332\|Ga0066388_102141269	Not Available	1007	Open in IMG/M
3300005332\|Ga0066388_102379118	Not Available	960	Open in IMG/M
3300005332\|Ga0066388_103882077	Not Available	763	Open in IMG/M
3300005332\|Ga0066388_105471048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300005332\|Ga0066388_106063213	Not Available	610	Open in IMG/M
3300005471\|Ga0070698_101169504	Not Available	718	Open in IMG/M
3300005713\|Ga0066905_100102676	Not Available	1946	Open in IMG/M
3300005713\|Ga0066905_100556679	Not Available	964	Open in IMG/M
3300005713\|Ga0066905_100724912	Not Available	855	Open in IMG/M
3300005713\|Ga0066905_100858031	Not Available	791	Open in IMG/M
3300005713\|Ga0066905_101003073	Not Available	736	Open in IMG/M
3300005713\|Ga0066905_101259593	Not Available	663	Open in IMG/M
3300005713\|Ga0066905_101412174	Not Available	630	Open in IMG/M
3300005713\|Ga0066905_102330712	Not Available	501	Open in IMG/M
3300005764\|Ga0066903_100473166	Not Available	2107	Open in IMG/M
3300005764\|Ga0066903_102896289	Not Available	930	Open in IMG/M
3300005764\|Ga0066903_104972177	Not Available	705	Open in IMG/M
3300005764\|Ga0066903_107673841	Not Available	555	Open in IMG/M
3300005764\|Ga0066903_108169720	Not Available	536	Open in IMG/M
3300005764\|Ga0066903_108199904	Not Available	535	Open in IMG/M
3300005937\|Ga0081455_10356961	Not Available	1029	Open in IMG/M
3300006049\|Ga0075417_10047184	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300006049\|Ga0075417_10071258	Not Available	1539	Open in IMG/M
3300006049\|Ga0075417_10534692	Not Available	591	Open in IMG/M
3300006194\|Ga0075427_10076081	Not Available	603	Open in IMG/M
3300006844\|Ga0075428_100040358	All Organisms → cellular organisms → Bacteria	5135	Open in IMG/M
3300006844\|Ga0075428_100040368	All Organisms → cellular organisms → Bacteria	5135	Open in IMG/M
3300006844\|Ga0075428_100077945	All Organisms → cellular organisms → Bacteria	3617	Open in IMG/M
3300006844\|Ga0075428_100093821	All Organisms → cellular organisms → Bacteria	3272	Open in IMG/M
3300006844\|Ga0075428_100221808	Not Available	2041	Open in IMG/M
3300006844\|Ga0075428_102430491	Not Available	537	Open in IMG/M
3300006845\|Ga0075421_100412951	Not Available	1618	Open in IMG/M
3300006845\|Ga0075421_101450957	Not Available	753	Open in IMG/M
3300006845\|Ga0075421_102125607	Not Available	595	Open in IMG/M
3300006847\|Ga0075431_100674385	Not Available	1013	Open in IMG/M
3300006847\|Ga0075431_101761701	Not Available	576	Open in IMG/M
3300006852\|Ga0075433_10106014	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300006852\|Ga0075433_11541606	Not Available	574	Open in IMG/M
3300006854\|Ga0075425_100493654	Not Available	1410	Open in IMG/M
3300006871\|Ga0075434_100779393	Not Available	973	Open in IMG/M
3300006880\|Ga0075429_100231574	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300006880\|Ga0075429_100395792	Not Available	1209	Open in IMG/M
3300006880\|Ga0075429_100525989	Not Available	1036	Open in IMG/M
3300006903\|Ga0075426_10305090	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300006969\|Ga0075419_10029236	Not Available	3417	Open in IMG/M
3300006969\|Ga0075419_11037609	Not Available	598	Open in IMG/M
3300007076\|Ga0075435_100434841	Not Available	1131	Open in IMG/M
3300007076\|Ga0075435_100917539	Not Available	764	Open in IMG/M
3300009147\|Ga0114129_10120069	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300009147\|Ga0114129_10352081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300009147\|Ga0114129_10540238	Not Available	1517	Open in IMG/M
3300009147\|Ga0114129_10643939	Not Available	1369	Open in IMG/M
3300009147\|Ga0114129_10684745	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300009147\|Ga0114129_12170408	Not Available	669	Open in IMG/M
3300009147\|Ga0114129_12676779	Not Available	594	Open in IMG/M
3300009147\|Ga0114129_12892049	Not Available	568	Open in IMG/M
3300009162\|Ga0075423_10107573	All Organisms → cellular organisms → Bacteria	2920	Open in IMG/M
3300009162\|Ga0075423_10222605	Not Available	1978	Open in IMG/M
3300009162\|Ga0075423_10392056	Not Available	1457	Open in IMG/M
3300009162\|Ga0075423_10819777	Not Available	985	Open in IMG/M
3300009162\|Ga0075423_12286546	Not Available	588	Open in IMG/M
3300009792\|Ga0126374_10357763	Not Available	1004	Open in IMG/M
3300009792\|Ga0126374_11393444	Not Available	570	Open in IMG/M
3300009792\|Ga0126374_11658467	Not Available	530	Open in IMG/M
3300010043\|Ga0126380_10221150	Not Available	1286	Open in IMG/M
3300010043\|Ga0126380_11146323	Not Available	666	Open in IMG/M
3300010046\|Ga0126384_10325988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300010046\|Ga0126384_10485987	Not Available	1061	Open in IMG/M
3300010046\|Ga0126384_10582808	Not Available	977	Open in IMG/M
3300010046\|Ga0126384_10777796	Not Available	855	Open in IMG/M
3300010046\|Ga0126384_10835869	Not Available	827	Open in IMG/M
3300010046\|Ga0126384_11390077	Not Available	654	Open in IMG/M
3300010047\|Ga0126382_10252864	Not Available	1292	Open in IMG/M
3300010047\|Ga0126382_10334101	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300010358\|Ga0126370_10152009	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300010358\|Ga0126370_12394566	Not Available	524	Open in IMG/M
3300010359\|Ga0126376_10435787	Not Available	1193	Open in IMG/M
3300010359\|Ga0126376_12778651	Not Available	539	Open in IMG/M
3300010360\|Ga0126372_12838988	Not Available	536	Open in IMG/M
3300010360\|Ga0126372_13222257	Not Available	507	Open in IMG/M
3300010362\|Ga0126377_10728931	Not Available	1046	Open in IMG/M
3300010362\|Ga0126377_10839835	Not Available	979	Open in IMG/M
3300010366\|Ga0126379_12066675	Not Available	672	Open in IMG/M
3300010366\|Ga0126379_13445636	Not Available	530	Open in IMG/M
3300010376\|Ga0126381_100903789	Not Available	1271	Open in IMG/M
3300010398\|Ga0126383_10499614	Not Available	1275	Open in IMG/M
3300010398\|Ga0126383_10673463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300010398\|Ga0126383_12040190	Not Available	661	Open in IMG/M
3300010398\|Ga0126383_12955762	Not Available	555	Open in IMG/M
3300010398\|Ga0126383_13160227	Not Available	538	Open in IMG/M
3300012512\|Ga0157327_1075080	Not Available	533	Open in IMG/M
3300012948\|Ga0126375_10645018	Not Available	816	Open in IMG/M
3300012948\|Ga0126375_10647173	Not Available	815	Open in IMG/M
3300012948\|Ga0126375_11060532	Not Available	664	Open in IMG/M
3300012948\|Ga0126375_11486051	Not Available	578	Open in IMG/M
3300015373\|Ga0132257_101748671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	798	Open in IMG/M
3300015374\|Ga0132255_102325021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	818	Open in IMG/M
3300021560\|Ga0126371_10533001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300027654\|Ga0209799_1149384	Not Available	532	Open in IMG/M
3300027873\|Ga0209814_10161662	Not Available	962	Open in IMG/M
3300027874\|Ga0209465_10115073	Not Available	1324	Open in IMG/M
3300027880\|Ga0209481_10068932	Not Available	1669	Open in IMG/M
3300027880\|Ga0209481_10661466	Not Available	542	Open in IMG/M
3300027907\|Ga0207428_10664794	Not Available	747	Open in IMG/M
3300027909\|Ga0209382_10183510	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300027909\|Ga0209382_10188364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2371	Open in IMG/M
3300027909\|Ga0209382_10809276	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300027909\|Ga0209382_11676265	Not Available	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.38%
Host-Associated	Host-Associated	42.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.38%
Plants	Host-Associated → Plants	42.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.28%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	39.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.97%
Loam	Environmental → Terrestrial → Soil → Loam	25.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	39.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.82%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	39.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	23.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1076027042	3300000559	Soil	LRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVLAIADRLXXXXXRSLLEILSVVQIRTLND*
AF_2010_repII_A1DRAFT_100219313	3300000597	Forest Soil	VSTGNIVTASFLRFHLTLLVRTHREEAELSFDFEAEDMHAAGDKILEVSRRISECPGVLYWKILSVVQIRTAGPQ*
AF_2010_repII_A1DRAFT_101340822	3300000597	Forest Soil	LSTGDIVTIPTLKFHLTLFVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMCWKILSVVRVRTADPQ*
AF_2010_repII_A100DRAFT_10719862	3300000655	Forest Soil	VSTGHIVTTSSLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVVAIADRLDACPGVLDWQILSVVQIRTAGPQ*
JGI10216J12902_1177089612	3300000956	Soil	RRIERVSTVHIVTTSSLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVQIRTAGPQ*
Ga0066397_101738671	3300004281	Tropical Forest Soil	VSTVHIVTTPSVRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVVAIADRLDACPGVLDWQILSVVQIRTAGPQ*
Ga0066395_100222735	3300004633	Tropical Forest Soil	VSTGNIVTASSLRFYFFFWVATHREQAELSFDFEAEDMHAAGDKILEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0066395_103550863	3300004633	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLFVRTYSEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMYWKILSVVRVRTADPQ*
Ga0065707_102151152	3300005295	Switchgrass Rhizosphere	VSTVHIVTTSSLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVQIRTAGPQ*
Ga0066388_1000263584	3300005332	Tropical Forest Soil	VSTGHIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0066388_1005065423	3300005332	Tropical Forest Soil	VSTVHIVTTPSLRFHLTLFVRTRLEEAELSFDFEAEDNHAAGDKVLAIADRLDACPGVLDWQILSVVQIRTAGPQ*
Ga0066388_1006481064	3300005332	Tropical Forest Soil	VSTGHIVTTSSLRFHLTLFVRTCGEEAELSFDFEAEDIYAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0066388_1013060483	3300005332	Tropical Forest Soil	VSTGNIVTAPFLRFHLTVLVRTHREEAELSFDFAAEDVHKASDKILEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0066388_1014777401	3300005332	Tropical Forest Soil	VSTDDIVTTSFLRFHLTLFVRTHREEADLSFDFEAEDIYAAGDKVLVIARRLGECPGVVDWKILSVVQIRGPQSLPSVSL*
Ga0066388_1021412692	3300005332	Tropical Forest Soil	VSTVHIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGVND*
Ga0066388_1023791182	3300005332	Tropical Forest Soil	VSTGHIVNTSSLRFHLTLFVRTYGEEAELSFDFEAEDIYAAGDKVLEIAKHLDECPGVLDWKILSVVQIRP*
Ga0066388_1038820772	3300005332	Tropical Forest Soil	VSTGHIVITSSLRFHLTLFVRTQLEEAELSFDFEAEDNQAAGDKVVAIADRLDKCSGVLDWQILSVVQIRTASPQ*
Ga0066388_1054710481	3300005332	Tropical Forest Soil	VSTSQIVTTSSLRFHLTLSVRTYGEEAELSFDFEADDMFAAGDKVLAFSRRISECPGVLYWKIL
Ga0066388_1060632132	3300005332	Tropical Forest Soil	VSTGNILTASFLRFHLTVLVRTHQEEAELSFDFAAEDAHKAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0070698_1011695041	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSTVHIVTTSSLRFHLTLFVRTQLEEAELSFDFEAEDVYAAGDKILEVSRRISESPGVLYWKILSVVQIRSLND*
Ga0066905_1001026763	3300005713	Tropical Forest Soil	VSAGNIVTASSLRFHLTLLVRTHREEAELSFVFEAEDMHTAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0066905_1005566792	3300005713	Tropical Forest Soil	VSTVHIVTTPCLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVVAIADRLDACPGVLDWQILSIVRIRTAGPQ*
Ga0066905_1007249122	3300005713	Tropical Forest Soil	VSTGHIVTTSSLRFHLTLFVRTCGEEAELSFDFEAEDIYAAGDKVLEVSRRISECPGILYWKILSVVQIRP*
Ga0066905_1008580312	3300005713	Tropical Forest Soil	VSTGNIVTASFLRFHLTVLVRTHQEEAELSFDFEAQDMHAAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0066905_1010030732	3300005713	Tropical Forest Soil	LLTGHIVATPALKFHLTLFVRTYGEEAELSFEFEAEDLYAAGDKVLEVSRRISECPGVLYWKILSVVQVRTADPQSTDGKPAERPPTARA*
Ga0066905_1012595932	3300005713	Tropical Forest Soil	VSTGNIVAASFLRFHLTVLVRTHQEEAELSFDFVAEDVHKASDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ
Ga0066905_1014121741	3300005713	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLLVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMYWKILSVVRVRTADPQ*
Ga0066905_1023307122	3300005713	Tropical Forest Soil	VSTGHIVLTSSLRFHLTLFVRTCREEADLSFDFEAEDIYAAGDKVLEIARHLGECPGVLDWKILSIVQIRTGG
Ga0066903_1004731662	3300005764	Tropical Forest Soil	VSTGTIVTASSLRFHLTVLVWTHREEAELSFDFEAEDMHAAGHRVLEVSRRISECPGVLYWKILSVVQIRTTGPQ*
Ga0066903_1028962891	3300005764	Tropical Forest Soil	IQSWRRIERVSTVHIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGVND*
Ga0066903_1049721771	3300005764	Tropical Forest Soil	VSTGHIVSTSPLRFHLTLFVRSYRQEDELSFDFEAEDLYTAGDKVLEISRRISECPGVLYWKILSVVQVRTADSH*
Ga0066903_1076738412	3300005764	Tropical Forest Soil	VSTGHIVTTSSLQFHLTLFVRTHREEAELSFDFEAEDIYVAADKVLEVSRRVSECPGVLYWKILSVVQSERQALND*
Ga0066903_1081697202	3300005764	Tropical Forest Soil	IVTTSSLRFHLTLFVRTCGEEAELSFDFEAEDIYAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0066903_1081999042	3300005764	Tropical Forest Soil	VSTVHIVTTPSLRFHLTLFVRTQLEEAEMSFDFEAEDNHAAGDKVVAIADRLDACPGVLDWQILSVVQIRTAGPQ*
Ga0081455_103569612	3300005937	Tabebuia Heterophylla Rhizosphere	VSTGDVVTTSSLGFHLTLFVRTYGEEAELNFDFEAEDMRAAGDKILEVSRRISECPGVLYWKILSVVQIRNAGPQ*
Ga0075417_100471842	3300006049	Populus Rhizosphere	VSTVHIVTTSSLRFHLTLFVRTHREETELSFDFEAEDVYTAGDKVLEVSRRISECPGVLYWKILSVVQIRSLND*
Ga0075417_100712581	3300006049	Populus Rhizosphere	RSILVRNIEVSTGQIVTTSSLRFHLTLSVRTYGEEAELSFDFEAEDMFAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0075417_105346921	3300006049	Populus Rhizosphere	IATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR*
Ga0075427_100760812	3300006194	Populus Rhizosphere	VSTGEILTASSLRFHLTVLVWTHREEAELSFDFEAEDMQAAGNKVLEVSRRISECPGVLYWKILSVVQIRTAGLNH*
Ga0075428_1000403582	3300006844	Populus Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR*
Ga0075428_1000403683	3300006844	Populus Rhizosphere	VSIVHIVTTSSLRFHLTLFVRTHREEAELSFDFEAEDNNAAGEKVLEIAKRLNECPGVLYWKILSVVQIRSRND*
Ga0075428_1000779454	3300006844	Populus Rhizosphere	VSTGHIVTTSLRFHLTLFVRTHGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0075428_1000938212	3300006844	Populus Rhizosphere	VSTGHIVPTSFLRFHLTLFVRTHREEAELSFDFEAGDIYAAGDKVLEIAKHLGECRGVLDWKILSIVQIKDLQCTPTVLL*
Ga0075428_1002218084	3300006844	Populus Rhizosphere	VSTGYIVPASSLGFHLTPFVRTYGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYRKILSVVQIRTAGPQ*
Ga0075428_1024304912	3300006844	Populus Rhizosphere	VSTGRIVNTSSLRFHLTLFVRTYGQEAALSFDFEAEDNTAAGDKVLAIARRLDRCAGVLDWQILSVVQIKTAGPQ*
Ga0075421_1004129513	3300006845	Populus Rhizosphere	LSTGDIVTIPTLKFHLTLFVRTYGDEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMYWKILSVVRVRTADRQ*
Ga0075421_1014509571	3300006845	Populus Rhizosphere	VSTGHIVTTSSLRFHLTLFVRTYGEEAELSFDFEAEDMHAAGDKVLEVSRRISECPGVLYWKILSVVQIRTGGPQCPPVSF*
Ga0075421_1021256071	3300006845	Populus Rhizosphere	DILTASSLRFHLTVLVWTHREEAELSFDFEAEDMQAAGNKVLEVSRRISECPGVLYWKILSVVQIRTAGLNH*
Ga0075431_1006743851	3300006847	Populus Rhizosphere	LSTGDIVTIPTLKFHLTLFVRTYGDEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLYWKILSVVRVRAADRQ*
Ga0075431_1017617011	3300006847	Populus Rhizosphere	VSTGHIVTASSLRFHLTLFVRTTDEETELSFEFEAEDIYAAAAKVTAIERRLVECPGVLDWKILSIVHIRTATPKRPAI*
Ga0075433_101060141	3300006852	Populus Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGL
Ga0075433_115416061	3300006852	Populus Rhizosphere	VSTGHIVTASSLRFHLTLFVRTTDEETELSFEFEAEDIYAAADKVTAIERRLVECPGVLDWKILSIVHIRTATPKRPAI*
Ga0075425_1004936542	3300006854	Populus Rhizosphere	VSTVHIVTTSSLRFHLTLFVRTELEEGELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGPQ*
Ga0075434_1007793931	3300006871	Populus Rhizosphere	LTASSLRFHLTVLVWTHREEAELSFDFEAEDMHTASNKVLEVSRRISECPGVLYWKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR*
Ga0075429_1002315743	3300006880	Populus Rhizosphere	STGHIVPTSFLRFHLTLFVRTHREEAELSFDFEAGDIYAAGDKVLEIAKHLGECRGVLDWKILSIVQIKDLQCTPTVLL*
Ga0075429_1003957924	3300006880	Populus Rhizosphere	LTASSLRFHLTVLVWTHREEAELSFDFEAEDMHTASNKVLEVSRRISECPGVLYWKILSVVQIRTAGLNH*
Ga0075429_1005259892	3300006880	Populus Rhizosphere	VSTVQIVTTSSLRFHLTLFVRTHREETELSFDFEAEDVYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0075426_103050901	3300006903	Populus Rhizosphere	VSTVHIVTTSSLRFHLTLFVRTHREEAELSFDFEAEDNNAAGEKVLEIAKRLNECPGVLYWKILSVVQIRSRND*
Ga0075419_100292362	3300006969	Populus Rhizosphere	VSTVQIVTTSSLRFFLFFFVRTHREEAELSFDFEAEDNNAAGEKVLEIAKRLNECPGVLYWKILSVVQIRSRND*
Ga0075419_110376092	3300006969	Populus Rhizosphere	VSTGHIVTTSLRFHLTLFVRTHGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0075435_1004348412	3300007076	Populus Rhizosphere	VSTGHIVTTSLRFHLTLFVRTHGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTPDPQ*
Ga0075435_1009175391	3300007076	Populus Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPTVSL*
Ga0114129_101200693	3300009147	Populus Rhizosphere	VSTSHIVPTSFLRFHLTLFVRTHREEAELSFDFEAGDIYAAGDKVLEIAKHLGECRGVLDWKILSIVQIKDLQCTPTVLL*
Ga0114129_103520811	3300009147	Populus Rhizosphere	VSTGHIVTASSLRFHLTLFVRTTDEETELSFEFEAEDIYAAADKVTAIERRLVECPGVLDWKILSIVRIRTATPK*
Ga0114129_105402382	3300009147	Populus Rhizosphere	VGGSKLSTGDIVTIPTLKFHLTLFVRTYGDEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLYWKILSVVRVRTADRQ*
Ga0114129_106439392	3300009147	Populus Rhizosphere	VSTVQIVTTSSLRFHLTLFVRTHQEETELSFDFEAEDVYTAGDKVLEVSRRISECPGVLYWKILSVVQIRSLND*
Ga0114129_106847452	3300009147	Populus Rhizosphere	VSTGHIVTTSSLRFHLTLLVCTCGEEAELSFDFEVEDIYAAGGKVLEISRRISECPGVLYWKILSVVQIRTGGPQCPPPFRCDAGQGLPVVNASPCGGSPFSSWRG*
Ga0114129_121704082	3300009147	Populus Rhizosphere	LRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVQIRTAGPQ*
Ga0114129_126767791	3300009147	Populus Rhizosphere	VSTGEILTASSLRFHLTVLVWTHREEAELSFDFEAEDMQAAGNKVLEVSRRISECPGVLYWKILSVVQIRTAG
Ga0114129_128920491	3300009147	Populus Rhizosphere	MWPHCVTETHDLPETHSILVKEDRSIVSTGDILTASSLRFHLTVLVWTHREEAELSFDFEAEDMHTASNKVLEVSRRISECPGVLYWK
Ga0075423_101075731	3300009162	Populus Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTPDPQ*
Ga0075423_102226051	3300009162	Populus Rhizosphere	ERVSTVHIVTTSSRRFHLTLFVRTQGEEAELTFDFEAEDIDAAGDKVLEVSRRISECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR*
Ga0075423_103920563	3300009162	Populus Rhizosphere	VSTGHIVTTSPLRFHLTLFVRTHREEAELSFDFEAEDNNAAGEKVLEIAKRLNECPGVLYWKILSVVQIRSRND*
Ga0075423_108197772	3300009162	Populus Rhizosphere	VSAGHIVITSSLRFHLTLFVCTCAEEAELRSDFEAEDIYAAGGKVLAIADRLDKCPGVLDWQILSVVEIRTAGPQ*
Ga0075423_122865463	3300009162	Populus Rhizosphere	TLKFHLTLFVRTYGDEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLYWKILSVVRVRTADRQ*
Ga0126374_103577632	3300009792	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLLVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLYWKILSVVRVRTEDPQ*
Ga0126374_113934441	3300009792	Tropical Forest Soil	VSTRDIVTTSFLRFHLTLSVRTHREEADLSFDFEAEDIYAAGDKVLVIARRLGECPGVVDWKILSVVQIRAGGPQCLPSVSL*
Ga0126374_116584672	3300009792	Tropical Forest Soil	VSIGHIIATSSPQFHLTPFVRTHREEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGVND*
Ga0126380_102211503	3300010043	Tropical Forest Soil	LSTGHIVPTPTLKFHLTLFVHTYCEEDELSFDFEAEDLYAAGGKVLEISRRISECPGVLYWKILSVVQVRTADPQLTDGKPAERPLTARA*
Ga0126380_111463232	3300010043	Tropical Forest Soil	VSAGNIVTASSLRFHLTLLVRTHREEAELSFVFEAEDMHTAGDKVLEVSRRISECPGVLYWKILSIVQIRTAGPQ*
Ga0126384_103259882	3300010046	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLFVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMYWKILSVVRVRTADPQ*
Ga0126384_104859872	3300010046	Tropical Forest Soil	VRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVLAIADRLDACPGVLDWQILSVVQIGTAGPQ*
Ga0126384_105828081	3300010046	Tropical Forest Soil	KTHSILVRRIEVSTGHIVTTSSLRFHLTLFVRTCGEEAELSFDFEAEDIYAAGDKVLEVSRRISECPGILYWKILSVVQIRP*
Ga0126384_107777962	3300010046	Tropical Forest Soil	RFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVIAIADRLDACPGVLDWQILSIVRIRTAGPQ*
Ga0126384_108358692	3300010046	Tropical Forest Soil	VSTGHIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGVND*
Ga0126384_113900772	3300010046	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLLIRTYVEEDELSFDFEAEDLYAAGDKVLEIARRISECPGVLYWKILSVVRVRTADPQ*
Ga0126382_102528641	3300010047	Tropical Forest Soil	LSTGHIVPTPTLKFHLTLFVHTYCEEDELSFDFEAEDLYAAGGKVLEISRRISECPGVLYWKILSVVQVRTADPQLTDGKPAERPPTARA*
Ga0126382_103341012	3300010047	Tropical Forest Soil	VRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVIAIADRLDACPGVLDWQILSIVRIRTAGPQ*
Ga0126370_101520092	3300010358	Tropical Forest Soil	VSTGNIVTASFLRFHLTLFVRTHREEAELSFDFEAEDMHAAGDKILEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0126370_123945661	3300010358	Tropical Forest Soil	VSTGHIVTTSSLRFHLTLFVRTYGEEVELSFDFEAEDMFAAGDKVLEVSRRVSECPGVLYWKIPSVIQIRPYRPSVTDGQFNK
Ga0126376_104357873	3300010359	Tropical Forest Soil	VSTGNIVAASFLRFHLTVLVRTHQEEAELSFDFVAEDVHKASDKVLEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0126376_127786511	3300010359	Tropical Forest Soil	LLTGHIVATPALKFHLTLFVRTYGEEAELSFEFEAEDLYAAGDKVLEVSRRISECPGVLYWKILSVVQIRTEGPQCPPSVSL*
Ga0126372_128389882	3300010360	Tropical Forest Soil	STDDIVTTSFLRFHLTLFVRIYREEADLSFDFEAEDIYAAGDKVLEIAKHLDECPGVLDWKILSIVQIRTGGPQCPTVSL*
Ga0126372_132222572	3300010360	Tropical Forest Soil	VSTGTIVTASSLRFHLTLLVRTHREEAELSFDFEAEDMHAAGHRVLEVSGRIGECPGVLYWKILSVVQIRTTGPQ*
Ga0126377_107289312	3300010362	Tropical Forest Soil	VSTGHIVITSSLRFHLTLFVRTQLEEAELSFDFEAEDNQAAGDKVVAIADRLDKCSGVLDWQILSVVQIRTSGPQ*
Ga0126377_108398351	3300010362	Tropical Forest Soil	TGLIVPTSLRFHLTLFVRTYREEAEMSFDFEAEDIYAAGEKVREVSRCISECSSVLYWKILSVVQIRIAGSR*
Ga0126379_120666752	3300010366	Tropical Forest Soil	VSTFHIVPTPCLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVIAIADRLDACPGVLDWQILSIVRIRTAGPQ*
Ga0126379_134456361	3300010366	Tropical Forest Soil	GNIVTASSLRFHLAVLVSTHREQAELSFDFEAEDMHAAAHRVLEVSRRISECPGVLYWKILSVVQIRTTGPQ*
Ga0126381_1009037894	3300010376	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLFVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLCWKILSVVRVRTAESSMT*
Ga0126383_104996142	3300010398	Tropical Forest Soil	VSTGQIVTKSSLRFHLTLSVRTYGEEAELSFDFEAEDMFAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0126383_106734632	3300010398	Tropical Forest Soil	ATRDLTKTHSILVRTIEVSTGHIVTTSSLRFHLTLFVRTYGEESELSFDFEAEDIYVAGDKVLEVSRRISECPGVLYWKILSVVQIRTEGPQCPPSVSL*
Ga0126383_120401901	3300010398	Tropical Forest Soil	VSTGHIIATSSPQFHLTPFVRTHREEAELSFDFEAEDMYAAGDRVLEVSRRVSECPGVFYWKILSVVQIRSEPQA
Ga0126383_129557621	3300010398	Tropical Forest Soil	VSTVHIVPTSSLRFHLTLFVRTYREEAELSFDFEAEDIYAAGDKVLEIARHLGECPGVLDWKILSIVQIRTGGPQCPPTVSL*
Ga0126383_131602271	3300010398	Tropical Forest Soil	LLTGHIVATPALKFHLTLFVRTYGEEAELSFEFEAEDLYAAGDKVLEVSRRISECPGVLYWKILSVVQVRTADSQLTDGKPAERPPTARA*
Ga0157327_10750801	3300012512	Arabidopsis Rhizosphere	TVHIVTTSSLRFHLTLFVRTELEEGELSFDFEAEDNHAAGDKVLAIADRLDKCPGVLDWQILSVVEIRTAGPQ*
Ga0126375_106450182	3300012948	Tropical Forest Soil	VSTFHIVPTPCLRFHLTLFVRTQLEEAELSFDFEAEDNHAAGDKVVAIADRLDKCSGVLDWQILSVVQIRTAGPQ*
Ga0126375_106471732	3300012948	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLLVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLCWKILSVVRVRTAESSMT*
Ga0126375_110605323	3300012948	Tropical Forest Soil	STGHIVTTSSLQFHLTLFVRTHREEAELSFDFEAEDIYAAGDKVLEVSRRISECPGVLYWKILSVVQIRP*
Ga0126375_114860511	3300012948	Tropical Forest Soil	VSTGHIVPTSSLRFHLTLFVRTYGEEASLSFDFEAEDNIAAGDKVLAIARRLDGCPGVLDWQILSVVQIRTACPQ*
Ga0132257_1017486712	3300015373	Arabidopsis Rhizosphere	VSTGHIVHTVSLRFHLTLSVRTYGEEAELSFDFEAEDMFAAGDKVQEVSRRISECPGVLYWKILSVVQIRTAGPQ*
Ga0132255_1023250213	3300015374	Arabidopsis Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLPVVNASPCGGSPFSSWRG*
Ga0126371_105330012	3300021560	Tropical Forest Soil	LSTGDIVTIPTLKFHLTLFVRTYVEEDELSFDFEAEDLYAAGDKVLEISRRISECPGVMYWKILSVVRVRTADPQ
Ga0209799_11493841	3300027654	Tropical Forest Soil	HIVTTSSLRFHLTLFVRTELEEAELSFDFEAEDNHAAGDKVIAIADRLDACPGVLDWQILSIVRIRTAGPQ
Ga0209814_101616623	3300027873	Populus Rhizosphere	LSTGDIVTIPTLKFHLTLFVRTYGDEDELSFDFEAEDLYAAGDKVLEISRRISECPGVLYWK
Ga0209465_101150732	3300027874	Tropical Forest Soil	VSTGNIVTASFLRFHLSLFVRTHREEAELSFDFEAEDMHAAGDKILEVSRRISECPGVLYWKILSVVQIRTAGPQ
Ga0209481_100689323	3300027880	Populus Rhizosphere	ISIPVRRIEVSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR
Ga0209481_106614661	3300027880	Populus Rhizosphere	VSTGEILTASSLRFHLTVLVWTHREEAELSFDFEAEDMQAAGNKVLEVSRRISECPGVLYWKILSVVQIRTAGLNH
Ga0207428_106647941	3300027907	Populus Rhizosphere	VSTGHIATTSSLRFDLTLFVCTCGEEAELSFDFEAEDIYAAGGKVLEISRRVSECPGVLYSKILSVVQIRTGGPQCPPPFRCDAGQGLAVVKR
Ga0209382_101835104	3300027909	Populus Rhizosphere	VSTGHIVTTSLRFHLTLFVRTHGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYWKILSVVQIRP
Ga0209382_101883641	3300027909	Populus Rhizosphere	VSTGYIVPASSLGFHLTPFVRTYGEDAELSFDFEAEDMYAAGDKVLEVSRRISECPGVLYRKILSVVQIRTAGPQ
Ga0209382_108092763	3300027909	Populus Rhizosphere	VSIVHIVTTSSLRFHLTLFVRTHREEAELSFDFEAEDNNAAGEKVLEIAKRLNECPGVLYWKILSVVQIRSRND
Ga0209382_116762651	3300027909	Populus Rhizosphere	VSTGHIVTTSSLRFHLTLFVRTYGEEAELSFDFEAEDMHAAGDKVLEVSRRISECPGVLYWKILSVVQIRTEGPQCPPTVSL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071400

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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