Metagenome / Metatranscriptome Family F071445

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071445
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	60 residues
Representative Sequence	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Number of Associated Samples	95
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.56 %
% of genes near scaffold ends (potentially truncated)	22.13 %
% of genes from short scaffolds (< 2000 bps)	77.87 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.475 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.148 % of family members)
Environment Ontology (ENVO)	Unclassified (31.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.361 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.45% β-sheet: 27.27% Coil/Unstructured: 52.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF12680	SnoaL_2	1.64
PF11954	DUF3471	1.64
PF00440	TetR_N	1.64
PF08818	DUF1801	1.64
PF03446	NAD_binding_2	1.64
PF00593	TonB_dep_Rec	1.64
PF01872	RibD_C	1.64
PF01425	Amidase	1.64
PF13924	Lipocalin_5	1.64
PF08281	Sigma70_r4_2	1.64
PF13191	AAA_16	0.82
PF00106	adh_short	0.82
PF03693	ParD_antitoxin	0.82
PF02852	Pyr_redox_dim	0.82
PF08546	ApbA_C	0.82
PF02775	TPP_enzyme_C	0.82
PF05977	MFS_3	0.82
PF01042	Ribonuc_L-PSP	0.82
PF01522	Polysacc_deac_1	0.82
PF12833	HTH_18	0.82
PF07238	PilZ	0.82
PF00248	Aldo_ket_red	0.82
PF13520	AA_permease_2	0.82
PF00768	Peptidase_S11	0.82
PF13505	OMP_b-brl	0.82
PF06779	MFS_4	0.82
PF01855	POR_N	0.82
PF03466	LysR_substrate	0.82
PF01810	LysE	0.82
PF00924	MS_channel	0.82
PF00702	Hydrolase	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.64
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.64
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.64
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.64
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.64
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.64
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.82
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.82
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.82
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.82
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.82
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.82
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.82
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.82
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
All Organisms	root	All Organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
cellular organisms	root	All Organisms → cellular organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.10 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.28 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.82 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.82 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.64 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.82 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.82 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.82 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.82 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.82 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.82 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.64 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.82 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	0.82 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.82 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.82 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.82 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	1.64 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.82 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.82 %
Mesorhizobium soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	0.82 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.82 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Rhizobacter sp. SG703	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. SG703	1.64 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.64 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.82 %
Massilia genomosp. 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia genomosp. 1	0.82 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.82 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.82 %
Mesorhizobium soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	0.82 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.82 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10428140	Not Available	635	Open in IMG/M
3300002245\|JGIcombinedJ26739_100070593	All Organisms → cellular organisms → Bacteria	3221	Open in IMG/M
3300005436\|Ga0070713_101698426	Not Available	613	Open in IMG/M
3300005541\|Ga0070733_10621289	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005993\|Ga0080027_10343173	Not Available	597	Open in IMG/M
3300005994\|Ga0066789_10029225	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300006055\|Ga0097691_1020480	Not Available	2868	Open in IMG/M
3300006086\|Ga0075019_10295630	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300006162\|Ga0075030_100676447	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300006176\|Ga0070765_100368650	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300006642\|Ga0075521_10332064	Not Available	735	Open in IMG/M
3300007255\|Ga0099791_10384674	Not Available	674	Open in IMG/M
3300007258\|Ga0099793_10615728	Not Available	545	Open in IMG/M
3300007265\|Ga0099794_10063273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1800	Open in IMG/M
3300007265\|Ga0099794_10569402	Not Available	599	Open in IMG/M
3300007788\|Ga0099795_10001719	All Organisms → cellular organisms → Bacteria → Proteobacteria	4879	Open in IMG/M
3300007788\|Ga0099795_10084693	Not Available	1219	Open in IMG/M
3300009029\|Ga0066793_10180566	Not Available	1230	Open in IMG/M
3300009088\|Ga0099830_10558495	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300009090\|Ga0099827_11243739	Not Available	647	Open in IMG/M
3300009143\|Ga0099792_10064747	Not Available	1825	Open in IMG/M
3300009143\|Ga0099792_10156681	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300009143\|Ga0099792_10957104	Not Available	570	Open in IMG/M
3300009651\|Ga0105859_1186581	Not Available	603	Open in IMG/M
3300009661\|Ga0105858_1179728	Not Available	612	Open in IMG/M
3300011120\|Ga0150983_10288188	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300011270\|Ga0137391_10031602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4444	Open in IMG/M
3300012202\|Ga0137363_11410663	Not Available	586	Open in IMG/M
3300012203\|Ga0137399_10077966	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300012351\|Ga0137386_11075519	Not Available	569	Open in IMG/M
3300012359\|Ga0137385_10387449	Not Available	1193	Open in IMG/M
3300012361\|Ga0137360_10292341	Not Available	1351	Open in IMG/M
3300012361\|Ga0137360_10317880	Not Available	1296	Open in IMG/M
3300012362\|Ga0137361_10148858	Not Available	2090	Open in IMG/M
3300012582\|Ga0137358_10020126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4292	Open in IMG/M
3300012582\|Ga0137358_10057337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. SG703	2602	Open in IMG/M
3300012582\|Ga0137358_10376446	Not Available	961	Open in IMG/M
3300012683\|Ga0137398_10325822	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300012685\|Ga0137397_10556956	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300012922\|Ga0137394_10052338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. SG703	3375	Open in IMG/M
3300012924\|Ga0137413_10381032	Not Available	1009	Open in IMG/M
3300012925\|Ga0137419_10730470	Not Available	805	Open in IMG/M
3300012927\|Ga0137416_11942240	Not Available	539	Open in IMG/M
3300012930\|Ga0137407_10003628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	10269	Open in IMG/M
3300012944\|Ga0137410_10243148	Not Available	1408	Open in IMG/M
3300012944\|Ga0137410_10359255	Not Available	1166	Open in IMG/M
3300015241\|Ga0137418_10002241	All Organisms → cellular organisms → Bacteria	17719	Open in IMG/M
3300019890\|Ga0193728_1032344	Not Available	2598	Open in IMG/M
3300020021\|Ga0193726_1012974	All Organisms → cellular organisms → Bacteria	4416	Open in IMG/M
3300020021\|Ga0193726_1079629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1511	Open in IMG/M
3300020034\|Ga0193753_10048960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2274	Open in IMG/M
3300020062\|Ga0193724_1041590	Not Available	976	Open in IMG/M
3300020140\|Ga0179590_1124246	Not Available	701	Open in IMG/M
3300020199\|Ga0179592_10099417	Not Available	1336	Open in IMG/M
3300020199\|Ga0179592_10255404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia genomosp. 1	786	Open in IMG/M
3300020579\|Ga0210407_11330485	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300020580\|Ga0210403_10680611	Not Available	825	Open in IMG/M
3300020580\|Ga0210403_11122471	Not Available	610	Open in IMG/M
3300020581\|Ga0210399_10795316	Not Available	773	Open in IMG/M
3300020583\|Ga0210401_10207687	Not Available	1816	Open in IMG/M
3300020583\|Ga0210401_11282234	Not Available	591	Open in IMG/M
3300021168\|Ga0210406_10264155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300021168\|Ga0210406_10417208	Not Available	1073	Open in IMG/M
3300021168\|Ga0210406_11057124	Not Available	600	Open in IMG/M
3300021170\|Ga0210400_10062048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2914	Open in IMG/M
3300021170\|Ga0210400_10263697	Not Available	1410	Open in IMG/M
3300021170\|Ga0210400_10307751	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300021171\|Ga0210405_10006588	All Organisms → cellular organisms → Bacteria → Proteobacteria	10330	Open in IMG/M
3300021171\|Ga0210405_10947759	Not Available	652	Open in IMG/M
3300021178\|Ga0210408_11338546	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300021401\|Ga0210393_10179023	Not Available	1710	Open in IMG/M
3300021402\|Ga0210385_11221237	Not Available	577	Open in IMG/M
3300021403\|Ga0210397_11487773	Not Available	526	Open in IMG/M
3300021404\|Ga0210389_10347597	Not Available	1164	Open in IMG/M
3300021411\|Ga0193709_1013194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2044	Open in IMG/M
3300021420\|Ga0210394_10444467	Not Available	1141	Open in IMG/M
3300021420\|Ga0210394_11077553	Not Available	694	Open in IMG/M
3300021432\|Ga0210384_10945001	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300021474\|Ga0210390_10501828	Not Available	1022	Open in IMG/M
3300021478\|Ga0210402_10570160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1050	Open in IMG/M
3300021559\|Ga0210409_11267404	Not Available	613	Open in IMG/M
3300024222\|Ga0247691_1016140	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300024246\|Ga0247680_1065014	Not Available	533	Open in IMG/M
3300025509\|Ga0208848_1009090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2060	Open in IMG/M
3300025579\|Ga0207927_1002366	All Organisms → cellular organisms → Bacteria	7712	Open in IMG/M
3300025854\|Ga0209176_10171027	Not Available	547	Open in IMG/M
3300025878\|Ga0209584_10219688	Not Available	725	Open in IMG/M
3300025939\|Ga0207665_10745653	Not Available	772	Open in IMG/M
3300026281\|Ga0209863_10168220	Not Available	639	Open in IMG/M
3300026304\|Ga0209240_1058022	Not Available	1451	Open in IMG/M
3300026320\|Ga0209131_1014690	All Organisms → cellular organisms → Bacteria → Proteobacteria	4799	Open in IMG/M
3300026551\|Ga0209648_10671332	Not Available	566	Open in IMG/M
3300027496\|Ga0208987_1078140	Not Available	603	Open in IMG/M
3300027667\|Ga0209009_1189004	Not Available	521	Open in IMG/M
3300027855\|Ga0209693_10468988	Not Available	604	Open in IMG/M
3300027903\|Ga0209488_10404289	Not Available	1010	Open in IMG/M
3300027908\|Ga0209006_10061400	All Organisms → cellular organisms → Bacteria → Proteobacteria	3361	Open in IMG/M
3300027908\|Ga0209006_10092644	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300027908\|Ga0209006_10290971	Not Available	1396	Open in IMG/M
3300027908\|Ga0209006_10299512	Not Available	1372	Open in IMG/M
3300027911\|Ga0209698_11241014	Not Available	548	Open in IMG/M
3300028047\|Ga0209526_10088406	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300028138\|Ga0247684_1069077	Not Available	579	Open in IMG/M
3300028536\|Ga0137415_10121092	All Organisms → cellular organisms → Bacteria → Acidobacteria	2462	Open in IMG/M
3300029636\|Ga0222749_10332482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	792	Open in IMG/M
3300031057\|Ga0170834_100284739	Not Available	610	Open in IMG/M
3300031057\|Ga0170834_102960755	Not Available	503	Open in IMG/M
3300031057\|Ga0170834_104448177	Not Available	583	Open in IMG/M
3300031122\|Ga0170822_11683944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium soli	703	Open in IMG/M
3300031128\|Ga0170823_13556719	Not Available	641	Open in IMG/M
3300031231\|Ga0170824_124877556	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031231\|Ga0170824_126930965	Not Available	588	Open in IMG/M
3300031708\|Ga0310686_109544359	Not Available	601	Open in IMG/M
3300031708\|Ga0310686_118225453	Not Available	707	Open in IMG/M
3300031715\|Ga0307476_10434802	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300031715\|Ga0307476_10604508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031715\|Ga0307476_11402166	Not Available	508	Open in IMG/M
3300031718\|Ga0307474_11223299	Not Available	594	Open in IMG/M
3300031730\|Ga0307516_10665254	Not Available	697	Open in IMG/M
3300032174\|Ga0307470_10013035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3519	Open in IMG/M
3300032180\|Ga0307471_103672221	Not Available	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.18%
Host-Associated	Host-Associated	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.72%
Aquatic	Environmental → Aquatic	2.46%
Plants	Host-Associated → Plants	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.72%
Sediment	Environmental → Aquatic → Sediment	2.46%
Roots	Host-Associated → Plants → Roots	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.33%
Loam	Environmental → Terrestrial → Soil → Loam	11.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.46%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.46%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.82%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104281402	3300001661	Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAGLKP*
JGIcombinedJ26739_1000705935	3300002245	Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESTIIATLKR*
Ga0070713_1016984261	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFKLINWECVRDESTLIAALKP*
Ga0070733_106212893	3300005541	Surface Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFEHRFDLINWECVRDESTIIATLKR*
Ga0080027_103431731	3300005993	Prmafrost Soil	MSWTLVFLIYTAHGAVHRDVLHGYDSKGDCQVEARAFERRFDLINWECVRDESALIATLKP*
Ga0066789_100292252	3300005994	Soil	MSWAVVFLIYTAQGAIHRDILHGYGSKGDCQLEAKVFERRLDLIKWECVRDATTR*
Ga0097691_10204806	3300006055	Arctic Peat Soil	MSWAMVFLIYTVQGAVHQNILHGYGSKGDCQLEAKVFERRLDLIKWECVRDATTR*
Ga0075019_102956302	3300006086	Watersheds	MGWALVFLIYTAHGNVHRNVLHGYGSHGDCQLDAKAFERRIDLIKWECVRDEAGPIVTLAPSIDSK*
Ga0075030_1006764471	3300006162	Watersheds	HFPYRISQEPGEICIMGWALVFLIYTAHGNVHRNVLHGYGSHGDCQLDAKAFERRIDLIKWECVRDEAGPIVTLAPSIDSK*
Ga0070765_1003686502	3300006176	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQTEARAFERRFDLINWECVREESTLIAALKH*
Ga0075521_103320642	3300006642	Arctic Peat Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQIEARAFERRFDLINWECVRDESGIVAAVKP*
Ga0099791_103846741	3300007255	Vadose Zone Soil	MSWALVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0099793_106157281	3300007258	Vadose Zone Soil	MSWTLVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0099794_100632731	3300007265	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAA
Ga0099794_105694021	3300007265	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAA
Ga0099795_100017196	3300007788	Vadose Zone Soil	MSWALVFVIYTAPGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALKP*
Ga0099795_100846932	3300007788	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0066793_101805661	3300009029	Prmafrost Soil	MSWALVFLIYTAQGAAHQDILHGYGSKGDCQLEAKVFERRLDLIKWECVRDATTR*
Ga0099830_105584951	3300009088	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALKP*
Ga0099827_112437392	3300009090	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRNVLHGYASKGDCLVEARAFERRFDLINWECVRDESALIAALKP*
Ga0099792_100647471	3300009143	Vadose Zone Soil	VFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALKP*
Ga0099792_101566811	3300009143	Vadose Zone Soil	IMSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECLRDESALIAALKP*
Ga0099792_109571041	3300009143	Vadose Zone Soil	MSWTLVFLIYTAHGTVHRDVLHGYGSKGDCQVEARAFERRFDLINWEGVRDENALIAALKP*
Ga0105859_11865811	3300009651	Permafrost Soil	MVFLIYTVQGAVHQNILHGYGSKGDCQLEAKDFERRIDLIKWECVRDESGLIATLKPYIDLK*
Ga0105858_11797281	3300009661	Permafrost Soil	MSWTLVFLIYTAHGAVHRDVLHGYDSKGDCQVEARAFERRFDLINWECVPDESALIAALKP*
Ga0150983_102881881	3300011120	Forest Soil	MMSWTLVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESSLIATLKP*
Ga0137391_100316023	3300011270	Vadose Zone Soil	MSWTLVFLIYTAHGTVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0137363_114106631	3300012202	Vadose Zone Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREESASIAALKPQLALVRAPLVE*
Ga0137399_100779661	3300012203	Vadose Zone Soil	VALVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWERVRDESALIAALKP*
Ga0137386_110755192	3300012351	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVR
Ga0137385_103874492	3300012359	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYSSKGDCELEAKAFGRPFDLINWEGVRDESALIEALKP*
Ga0137360_102923413	3300012361	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQLEARAFERRFDLINWECVRDESALIAALKP*
Ga0137360_103178803	3300012361	Vadose Zone Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIAALKP*
Ga0137361_101488581	3300012362	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRNVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0137358_100201263	3300012582	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFCLINWECARDESALIGALKP*
Ga0137358_100573371	3300012582	Vadose Zone Soil	LDAGLPDYTTHGAVHRDVPHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIAALKP
Ga0137358_103764461	3300012582	Vadose Zone Soil	IMSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREESASIAALKPQLALVRAPLVE*
Ga0137398_103258222	3300012683	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRNVLHGYGSKGDCQVEARAFERRFDLINWEGVRDESALIAALKP*
Ga0137397_105569561	3300012685	Vadose Zone Soil	IMSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIAALKP*
Ga0137394_100523381	3300012922	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIAALKP*
Ga0137413_103810321	3300012924	Vadose Zone Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIAALNP*
Ga0137419_107304701	3300012925	Vadose Zone Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREESASIAALKPQLALVRAPLPGPLIE*
Ga0137416_119422402	3300012927	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREESASIAALKPQL
Ga0137407_100036282	3300012930	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECIRDESALIAALKP*
Ga0137410_102431481	3300012944	Vadose Zone Soil	MSWALVFLIYTAHGAVDRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALKP*
Ga0137410_103592551	3300012944	Vadose Zone Soil	IMSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREERASIAVLKLQLALVRAPLVE*
Ga0137420_14813322	3300015054	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWNAFETRAP*
Ga0137418_1000224117	3300015241	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALKP*
Ga0193728_10323443	3300019890	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESAVVAALK
Ga0193726_10129742	3300020021	Soil	MSWTLVFLIYTSHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0193726_10796292	3300020021	Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVREESASIAALK
Ga0193753_100489603	3300020034	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESAVIAALK
Ga0193724_10415902	3300020062	Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGHCQVEARAFERRFDLIDWECVRDESVSIAALK
Ga0179590_11242461	3300020140	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALK
Ga0179592_100994171	3300020199	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECV
Ga0179592_102554042	3300020199	Vadose Zone Soil	MSWTLVFLIYTTHGAVHRDVLHGYRSKGDCQVEARAFERRFDLIDWECVRDESASIAALK
Ga0210407_113304852	3300020579	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQTEARAFERRFDLINWECVREESTLIAALK
Ga0210403_106806111	3300020580	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQIEARAFERRFDLINWECVRDETTLTAALK
Ga0210403_111224711	3300020580	Soil	MSWAMVFLIYTAQGAVHQDILHGYGSKGDCQLDAKVFERRFDLIKWECVRDVTNPMIRAR
Ga0210399_107953161	3300020581	Soil	MSWTLVFLIYTAHGDVHRNVLHGYASKGDCLVEARAFDRRFDFINWECVRDESALIAALK
Ga0210401_102076873	3300020583	Soil	MMSWTLVFLIYTAHGAVHRDILHGYGSKGDCQLEAKVFERRFDLIKWECVRDVLPVLATQGGNKP
Ga0210401_112822341	3300020583	Soil	MSWTLVFLIYTAHGAVHRDILHGYGSKGDCQMEAKAFERRFDLIKWECVRDESGLIAALKPANLK
Ga0210406_102641552	3300021168	Soil	MSWTLVFLIYTAHGTIHRNVLHGYGSKGDCQVEARAFERRFDLINWECVRDESSLVATLK
Ga0210406_104172082	3300021168	Soil	MSWTLVFLIYTAHGAVHRNVLHGYASKGDCLVEARAFERRFDFINWECVRDESALIAARK
Ga0210406_110571241	3300021168	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKSDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0210400_100620482	3300021170	Soil	MSWTLVFLIYTSHGAVHRDVLHGYGSKGDCQSEARAFERRFDLINWQCVRDEGTLIVALK
Ga0210400_102636972	3300021170	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0210400_103077511	3300021170	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQTEARAFERRFDLINWECV
Ga0210405_100065885	3300021171	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQTEARAFERRFDLINWECVREESALIAALK
Ga0210405_109477593	3300021171	Soil	MSWALVFLIYTAQGAVHRDILHGYGSKGDCQLEAKVFERRFDLIKWECVRDVLPVLATQG
Ga0210408_113385462	3300021178	Soil	MSWTLVFLIYTAHGTIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESSLIATLK
Ga0210393_101790231	3300021401	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQIEARAFERRFDLINWECVRDETTLTAAL
Ga0210385_112212371	3300021402	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQIEARAFERRFDLINWECVRDETALTAALK
Ga0210397_114877731	3300021403	Soil	MSWALVFLIYTAQGAVHQNVLHGYGSKGDCQSEARAFERRFDLINWQCVRDEGTLIVALK
Ga0210389_103475972	3300021404	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQAEARAFERRFDLINWECVRDESALIAALK
Ga0193709_10131942	3300021411	Soil	MSWTLVFLIYTAHGEVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAAFK
Ga0210394_104444672	3300021420	Soil	MSWTLVFLIYTSHGVLHRDVLHGYGSKGDCQLEARAFERRFDLINWECVPDESVLVAALK
Ga0210394_110775532	3300021420	Soil	MSWAMVFLIYTAQGAVHQDILHGYGSKGDCQLDAKVFERRFDLIKWECVRDVTNR
Ga0210384_109450012	3300021432	Soil	MSWTLVFLIYTAHGTIHRNVLHGYGSKGDCQVEARAFERRFDLINWECVRDESSLIATLK
Ga0210390_105018281	3300021474	Soil	VFLIYTAHGAVHRDILHGYGSKGDCQLEAKVFERRFDLIKWECVRDVLPVLATQGGNKP
Ga0210402_105701602	3300021478	Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDESASIVALK
Ga0210409_112674042	3300021559	Soil	MSWAMVFLIYTAQGAVHQNILHGYGSKGDCQLEAKVFERRLDLIKWECVRDVTSR
Ga0247691_10161401	3300024222	Soil	MSWTLVFLIYTAHGAVHRNVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALVAALK
Ga0247680_10650141	3300024246	Soil	MSWTLVFLIYTAHGAVHRNVLHGYASKGDCLIEARAFERRFDFLNWECVRDESALIAALK
Ga0208848_10090901	3300025509	Arctic Peat Soil	MSWTLVFLIYTAHGAVHRDILHGYGSKGDCQLEAQAFERRFDLINWECVRDESALIAALK
Ga0207927_10023666	3300025579	Arctic Peat Soil	MSWAMVFLIYTVQGAVHQNILHGYGSKGDCQLEAKVFERRLDLIKWECVRDATTR
Ga0209176_101710271	3300025854	Arctic Peat Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALTAALK
Ga0209584_102196882	3300025878	Arctic Peat Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQIEARAFERRFDLINWECVRDESGIVAAVK
Ga0207665_107456532	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSWTLVFLFYTAHRAVHRDVLHGYGSKGDCQVEARAFERRFKLINWECVRDESTLIAALK
Ga0209863_101682201	3300026281	Prmafrost Soil	MSWTLVFLIYTAHGAVHRDVLHGYDSKGDCQVEARAFERRFDLINWECVRDESALIATLK
Ga0209240_10580222	3300026304	Grasslands Soil	MSWTLVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0209131_10146903	3300026320	Grasslands Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALK
Ga0209648_106713321	3300026551	Grasslands Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVR
Ga0208987_10781402	3300027496	Forest Soil	MTWTLVFLIYTVHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0209009_11890041	3300027667	Forest Soil	MSWTLVFLIYTSHGAVHRDVLHGYGSKGDCQLEARAFERRFDLINWECVRDESALIAALK
Ga0209693_104689881	3300027855	Soil	MSWAMVFLIYTAQGAVHQDILHGYGSKGDCQMEAKVFERRLDLIKWECVRDATNPAMKSSFSP
Ga0209488_104042891	3300027903	Vadose Zone Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWEC
Ga0209006_100614005	3300027908	Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESTIIATLK
Ga0209006_100926442	3300027908	Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCLIEARAFERRFDLINWECVRDESTLIAVLK
Ga0209006_102909711	3300027908	Forest Soil	MSWTLVFLIYTAHGAIHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRD
Ga0209006_102995123	3300027908	Forest Soil	MSWTLVFLIYTAHGDVHRNVLHGYASKGDCLVEARAFDRWFDFINWECVRDESALIAALK
Ga0209698_112410142	3300027911	Watersheds	HFPYRISQEPGEICIMGWALVFLIYTAHGNVHRNVLHGYGSHGDCQLDAKAFERRIDLIKWECVRDEAGPIVTLAPSIDSK
Ga0209526_100884061	3300028047	Forest Soil	MSWTLVFLIYTAHGDVHRNVLHGYASKGDCLVEARAFERRFDFINWECVR
Ga0247684_10690772	3300028138	Soil	MSWTLVFLIYTAHGAVHRNVLHGYGSKGDCQVEARAFERRFDLINWECVRDESALIAALK
Ga0137415_101210924	3300028536	Vadose Zone Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDE
Ga0222749_103324822	3300029636	Soil	MSWALVFLIYTAQGAVHQNILHGYGSKGDCQLEAKVFERRLDLIKWECVRDATLR
Ga0170834_1002847391	3300031057	Forest Soil	MSWTLVFLIYTAHGVVHRDALHGYGSKGDCQVEARAFERRFDFINWECVRDESALIAARK
Ga0170834_1029607551	3300031057	Forest Soil	MSWTLVFLIYAAHGAVHRDALHGYGSKGDCQVEARAFERRFDLINWECVRDES
Ga0170834_1044481772	3300031057	Forest Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCQLEAKAFGRRFDLINWECVRDESALIAALK
Ga0170822_116839442	3300031122	Forest Soil	MSWTLVFLIYTAHGAVHRDILHGYGSKGDCQLEAKAFGRRFDLINWECVRDESALIAALK
Ga0170823_135567191	3300031128	Forest Soil	MSWTLVFLIYTAHGAVHRNVLHGYASKGDCLVEARAFDRRFDFINWECVRDESALIAARK
Ga0170824_1248775562	3300031231	Forest Soil	MSWTLVFLIYTAHGAVHRDILHGYGSKGDCQLEARAFERRFDLIKWECVRDESDLIAALK
Ga0170824_1269309651	3300031231	Forest Soil	MSWTLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLINWECVRDESASMAALK
Ga0310686_1095443592	3300031708	Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQLEARAFERRFDLINWECVPDESFLVAALK
Ga0310686_1182254532	3300031708	Soil	MSWAMVFLIYTAQGAVHQDILHGYGSKGDCQLEAKVFERRLDLIKWECVRDVTTR
Ga0307476_104348022	3300031715	Hardwood Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKADCLIEARAFERRFDLINWECVRDESTLIAVLK
Ga0307476_106045081	3300031715	Hardwood Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQTEARAFERRFDLINWECVREESTLIATLK
Ga0307476_114021661	3300031715	Hardwood Forest Soil	MSWALVFLIYTAHGAVHRDILHGYGSKGDCELEAKAFGRRFDLINWECVRDESALIAALKPYEMK
Ga0307474_112232992	3300031718	Hardwood Forest Soil	MMSWTLVFLIYTAHGAVHRDILHGYGSKGDCQLEAKVFERRFDLIKWECVRDVLPVMATQGENKP
Ga0307516_106652541	3300031730	Ectomycorrhiza	MGWMLVFLIYTTHGAVHRDVLHGYGSKGDCQVEARAFERRFDLIDWECVRDDSASIAALK
Ga0307470_100130351	3300032174	Hardwood Forest Soil	MSWALVFLIYTAHGAVHRDILHGYGSQGDCQLEAKAFRRRFDLISWECVRDESALIAALK
Ga0307471_1036722211	3300032180	Hardwood Forest Soil	MSWTLVFLIYTAHGAVHRDVLHGYGSKGDCQVEARAFERRFDFINWECVRDESALIAARK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071445

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences