Metagenome / Metatranscriptome Family F071504

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071504
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	73 residues
Representative Sequence	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR
Number of Associated Samples	102
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.34 %
% of genes near scaffold ends (potentially truncated)	26.23 %
% of genes from short scaffolds (< 2000 bps)	81.97 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.475 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.393 % of family members)
Environment Ontology (ENVO)	Unclassified (44.262 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.58% β-sheet: 0.00% Coil/Unstructured: 16.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF04545	Sigma70_r4	17.21
PF01791	DeoC	13.11
PF00196	GerE	3.28
PF02803	Thiolase_C	1.64
PF08281	Sigma70_r4_2	1.64
PF00106	adh_short	0.82
PF08240	ADH_N	0.82
PF13561	adh_short_C2	0.82
PF02836	Glyco_hydro_2_C	0.82
PF02073	Peptidase_M29	0.82
PF00107	ADH_zinc_N	0.82
PF13424	TPR_12	0.82
PF02518	HATPase_c	0.82
PF01408	GFO_IDH_MocA	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.64
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.82
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
All Organisms	root	All Organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
cellular organisms	root	All Organisms → cellular organisms	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	19.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	12.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	11.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.28 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.82 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.82 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.46 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.82 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.82 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.82 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.82 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.82 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.46 %
Gimesia alba	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia alba	0.82 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_77712	Not Available	524	Open in IMG/M
3300001686\|C688J18823_10003398	All Organisms → cellular organisms → Bacteria	10075	Open in IMG/M
3300001686\|C688J18823_10060616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2622	Open in IMG/M
3300002568\|C688J35102_120768207	Not Available	1526	Open in IMG/M
3300002568\|C688J35102_120950577	Not Available	2888	Open in IMG/M
3300004081\|Ga0063454_100456770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	880	Open in IMG/M
3300005162\|Ga0066814_10002599	Not Available	1671	Open in IMG/M
3300005329\|Ga0070683_101308898	Not Available	696	Open in IMG/M
3300005330\|Ga0070690_100776098	Not Available	742	Open in IMG/M
3300005334\|Ga0068869_101164199	Not Available	677	Open in IMG/M
3300005334\|Ga0068869_101575227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300005335\|Ga0070666_10309060	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005336\|Ga0070680_101010546	Not Available	718	Open in IMG/M
3300005338\|Ga0068868_100259561	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005339\|Ga0070660_100034882	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300005340\|Ga0070689_100269997	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005355\|Ga0070671_100435418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1124	Open in IMG/M
3300005356\|Ga0070674_100238630	Not Available	1422	Open in IMG/M
3300005367\|Ga0070667_100233879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1639	Open in IMG/M
3300005434\|Ga0070709_10142667	Not Available	1647	Open in IMG/M
3300005435\|Ga0070714_101435686	Not Available	674	Open in IMG/M
3300005436\|Ga0070713_100780893	Not Available	915	Open in IMG/M
3300005437\|Ga0070710_10431801	Not Available	889	Open in IMG/M
3300005437\|Ga0070710_10553436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300005437\|Ga0070710_11388377	Not Available	525	Open in IMG/M
3300005438\|Ga0070701_10708949	Not Available	678	Open in IMG/M
3300005456\|Ga0070678_100332043	Not Available	1302	Open in IMG/M
3300005545\|Ga0070695_100490727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300005547\|Ga0070693_100053493	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300005549\|Ga0070704_100227386	Not Available	1520	Open in IMG/M
3300005563\|Ga0068855_100037706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	5745	Open in IMG/M
3300005614\|Ga0068856_100027615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5536	Open in IMG/M
3300005617\|Ga0068859_101993513	Not Available	641	Open in IMG/M
3300005718\|Ga0068866_10956021	Not Available	606	Open in IMG/M
3300005719\|Ga0068861_100671218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	960	Open in IMG/M
3300005842\|Ga0068858_101740288	Not Available	616	Open in IMG/M
3300005844\|Ga0068862_101181131	Not Available	763	Open in IMG/M
3300006057\|Ga0075026_100566300	Not Available	663	Open in IMG/M
3300006175\|Ga0070712_100053648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2816	Open in IMG/M
3300006175\|Ga0070712_100816419	Not Available	801	Open in IMG/M
3300006573\|Ga0074055_11529661	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia alba	741	Open in IMG/M
3300006574\|Ga0074056_11857874	Not Available	610	Open in IMG/M
3300006578\|Ga0074059_10016420	Not Available	629	Open in IMG/M
3300006755\|Ga0079222_10005018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4348	Open in IMG/M
3300006804\|Ga0079221_10040194	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300006806\|Ga0079220_10000328	All Organisms → cellular organisms → Bacteria	11323	Open in IMG/M
3300006954\|Ga0079219_11602577	Not Available	597	Open in IMG/M
3300009098\|Ga0105245_10569785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1156	Open in IMG/M
3300009098\|Ga0105245_11122591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300009101\|Ga0105247_11085041	Not Available	631	Open in IMG/M
3300009162\|Ga0075423_10111318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2868	Open in IMG/M
3300009174\|Ga0105241_10282869	Not Available	1417	Open in IMG/M
3300009174\|Ga0105241_10416181	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300009176\|Ga0105242_10602061	Not Available	1062	Open in IMG/M
3300009177\|Ga0105248_12850406	Not Available	551	Open in IMG/M
3300009551\|Ga0105238_11419929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300009553\|Ga0105249_10982426	Not Available	913	Open in IMG/M
3300010154\|Ga0127503_11011848	Not Available	517	Open in IMG/M
3300010373\|Ga0134128_12839141	Not Available	534	Open in IMG/M
3300010396\|Ga0134126_10577838	Not Available	1288	Open in IMG/M
3300010397\|Ga0134124_10803140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300010401\|Ga0134121_11924513	Not Available	621	Open in IMG/M
3300010403\|Ga0134123_11835080	Not Available	661	Open in IMG/M
3300011119\|Ga0105246_10233384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1450	Open in IMG/M
3300012212\|Ga0150985_123012131	Not Available	515	Open in IMG/M
3300012915\|Ga0157302_10199994	Not Available	716	Open in IMG/M
3300012951\|Ga0164300_10032677	Not Available	1926	Open in IMG/M
3300012951\|Ga0164300_10045825	Not Available	1701	Open in IMG/M
3300012955\|Ga0164298_10191447	Not Available	1188	Open in IMG/M
3300012955\|Ga0164298_10364887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300012955\|Ga0164298_10632339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300012957\|Ga0164303_10017263	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300012957\|Ga0164303_10067772	Not Available	1652	Open in IMG/M
3300012958\|Ga0164299_10003311	All Organisms → cellular organisms → Bacteria	5116	Open in IMG/M
3300012958\|Ga0164299_10053096	Not Available	1906	Open in IMG/M
3300012958\|Ga0164299_10725908	Not Available	698	Open in IMG/M
3300012961\|Ga0164302_11217075	Not Available	603	Open in IMG/M
3300012984\|Ga0164309_10069016	Not Available	2124	Open in IMG/M
3300012985\|Ga0164308_10025295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3537	Open in IMG/M
3300012986\|Ga0164304_10904750	Not Available	690	Open in IMG/M
3300012987\|Ga0164307_10167632	Not Available	1464	Open in IMG/M
3300012987\|Ga0164307_11021958	Not Available	674	Open in IMG/M
3300012989\|Ga0164305_10501272	Not Available	955	Open in IMG/M
3300012989\|Ga0164305_11654777	Not Available	573	Open in IMG/M
3300013100\|Ga0157373_10635714	Not Available	778	Open in IMG/M
3300013104\|Ga0157370_10355537	Not Available	1350	Open in IMG/M
3300013105\|Ga0157369_10485696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300013306\|Ga0163162_10280676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1798	Open in IMG/M
3300013307\|Ga0157372_10416106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1566	Open in IMG/M
3300013308\|Ga0157375_10416066	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300015371\|Ga0132258_10110736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6498	Open in IMG/M
3300015373\|Ga0132257_100872297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300017792\|Ga0163161_10600745	Not Available	907	Open in IMG/M
3300020070\|Ga0206356_10517460	Not Available	525	Open in IMG/M
3300020082\|Ga0206353_10061280	Not Available	554	Open in IMG/M
3300025901\|Ga0207688_10022155	All Organisms → cellular organisms → Bacteria	3475	Open in IMG/M
3300025906\|Ga0207699_10873983	Not Available	663	Open in IMG/M
3300025913\|Ga0207695_11253460	Not Available	622	Open in IMG/M
3300025914\|Ga0207671_10298314	Not Available	1273	Open in IMG/M
3300025915\|Ga0207693_10172503	Not Available	1703	Open in IMG/M
3300025915\|Ga0207693_10474509	Not Available	977	Open in IMG/M
3300025918\|Ga0207662_10854304	Not Available	643	Open in IMG/M
3300025924\|Ga0207694_10089662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2426	Open in IMG/M
3300025924\|Ga0207694_10998921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300025925\|Ga0207650_11607522	Not Available	552	Open in IMG/M
3300025927\|Ga0207687_10148133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300025928\|Ga0207700_10591932	Not Available	987	Open in IMG/M
3300025928\|Ga0207700_11175443	Not Available	685	Open in IMG/M
3300025929\|Ga0207664_11020579	Not Available	741	Open in IMG/M
3300025934\|Ga0207686_11743045	Not Available	515	Open in IMG/M
3300025941\|Ga0207711_10921016	Not Available	812	Open in IMG/M
3300025960\|Ga0207651_10598342	Not Available	964	Open in IMG/M
3300026035\|Ga0207703_11437621	Not Available	663	Open in IMG/M
3300026067\|Ga0207678_10795279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300026078\|Ga0207702_10019943	All Organisms → cellular organisms → Bacteria	5555	Open in IMG/M
3300026121\|Ga0207683_10151126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2095	Open in IMG/M
3300028379\|Ga0268266_10345844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300031720\|Ga0307469_12293244	Not Available	526	Open in IMG/M
3300031938\|Ga0308175_102186503	Not Available	620	Open in IMG/M
3300031996\|Ga0308176_12815621	Not Available	517	Open in IMG/M
3300032074\|Ga0308173_10245906	Not Available	1512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.38%
Host-Associated	Host-Associated	42.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.74%
Plants	Host-Associated → Plants	42.62%
Aquatic	Environmental → Aquatic	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.39%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Sediment	Environmental → Aquatic → Sediment	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.79%
Loam	Environmental → Terrestrial → Soil → Loam	22.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.46%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.64%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.28%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.10%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.28%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01097750	2199352025	Soil	MSFNIDSNLRLELGRQRQADLLQRAQRDKLERGLSDEIANDPGRLPHPSRSILLRRNRRALPGEAR
C688J18823_100033981	3300001686	Soil	PTLRIEKEVTHMSFNIDSNLRLELGRQRQAELLQRAQQDTLEHALLAEIASDPGSQPHPSRSFLHLRRNRQALPREAR*
C688J18823_100606162	3300001686	Soil	MSLITDPTLRIGKEVTHMSFNIDSNLRLEFGRQRQAELLHQAQRDRREHALLAETGGDLGSHPHPSRSFLHLRRNRQALPREAR*
C688J35102_1207682072	3300002568	Soil	MSFNIDSNLRLEFGRERQAELLHRAQRDRREHALLAEIGGDPGSQPQPSRSFLRLRRNRQALPREAR*
C688J35102_1209505774	3300002568	Soil	MSFNIDSNLRLELGRQRQAELLQRAQQDTLEHALLAEIASDPGSQPHPSRSFLHLRRNRQALPREAR*
Ga0063454_1004567701	3300004081	Soil	GKEVTHMSFNIDSNLRLEFGRERQAELLHRAQRDRREHALLAEIGGDPGSQPQPSRSFLRLRRNRQALPREAR*
Ga0066814_100025992	3300005162	Soil	MSRTTDPILCFGKEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0070683_1013088981	3300005329	Corn Rhizosphere	MSLITDLTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQA
Ga0070690_1007760982	3300005330	Switchgrass Rhizosphere	MSLITDPMLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0068869_1011641991	3300005334	Miscanthus Rhizosphere	SFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLPAHQPRSFLHLRRNRQALPREAR*
Ga0068869_1015752271	3300005334	Miscanthus Rhizosphere	SFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0070666_103090602	3300005335	Switchgrass Rhizosphere	MSLITNPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR*
Ga0070680_1010105462	3300005336	Corn Rhizosphere	MSLITNPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0068868_1002595612	3300005338	Miscanthus Rhizosphere	MSLITDPTLRFGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0070660_1000348822	3300005339	Corn Rhizosphere	MSLITDPTLRFGEGVTPVSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLPAHQPRSFLHLRRNRQALPREAR*
Ga0070689_1002699971	3300005340	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDVGLRAHRPRSFLHLRRNRQALPREAR*
Ga0070671_1004354183	3300005355	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0070674_1002386302	3300005356	Miscanthus Rhizosphere	MSLITDPTLRFGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR*
Ga0070667_1002338793	3300005367	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0070709_101426671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRITDSTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0070714_1014356861	3300005435	Agricultural Soil	MSFNIDSNLRLELGRQRQAELLQHAHRDKREHALIAEIAHDSGLQPQRSRSFLHLRRNRHALPGEAR*
Ga0070713_1007808932	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQQAQRDRLERGLLDEIANDSSSLPHPSRSILLRRNRQALPGEAR*
Ga0070710_104318011	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSHTKHPTLRFGKEVTQMSFNIDSNLRLEFGRQRQAELLQRAQQDKLERGLSDEIANGPGRLPHQSRSILLRRNRQALPREAR*
Ga0070710_105534362	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHGLSAESAHDAGLQAHQSRSFLHLRRN
Ga0070710_113883772	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSRITDSTLRFGEEVTHMSFNIDGNLRLEFGRQRQAELLQRAQRDKLEHALSAESANDAGRHRNRSRSFLHLRRNRQALPREAR*
Ga0070701_107089492	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSLITDPMLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR*
Ga0070678_1003320432	3300005456	Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNR
Ga0070695_1004907271	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLPAHQPRSFLHLRRNRQALPREAR*
Ga0070693_1000534931	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRN
Ga0070704_1002273863	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSLITDPMLRLGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLQAHRSRSFLHLRRNRQALPREAR*
Ga0068855_1000377066	3300005563	Corn Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0068856_1000276156	3300005614	Corn Rhizosphere	MSLITDLTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQALPREAR*
Ga0068859_1019935132	3300005617	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQALPREAR*
Ga0068866_109560211	3300005718	Miscanthus Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0068861_1006712183	3300005719	Switchgrass Rhizosphere	PMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0068858_1017402881	3300005842	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQAFPREAR*
Ga0068862_1011811312	3300005844	Switchgrass Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0075026_1005663001	3300006057	Watersheds	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSADIANDAGLQPHRSRSFLHLRRNRQALPR
Ga0070712_1000536482	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSHTKPSTLRFGKEVTHMSFNIDSNLRLELGRRRQADLLQRAQRDRLERGLSDEIANDPGPLPHQSRSILLRRNRQALPREVR*
Ga0070712_1008164192	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSRITDSTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0074055_115296611	3300006573	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALFAESASDAGLQPKQSRSIRLRRNRQA
Ga0074056_118578743	3300006574	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALFAESASDAGLQPKQSRSIRLRR
Ga0074059_100164202	3300006578	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0079222_100050184	3300006755	Agricultural Soil	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQGDKLEHALSAESGNDADLRAHPSRSFLHLRRNRQALPREAR*
Ga0079221_100401944	3300006804	Agricultural Soil	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAESGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0079220_100003284	3300006806	Agricultural Soil	MSLITDPTLRFGKEVTHMSFNIDSNLRLEFGRQRQAELLQRAQGDKLEHALSAESGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0079219_116025771	3300006954	Agricultural Soil	EVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAESGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105245_105697851	3300009098	Miscanthus Rhizosphere	PMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105245_111225911	3300009098	Miscanthus Rhizosphere	MSFNIDSNLRLELGRQRGAELIQRAHQDKLEHGLSAEIANDAGLQAHRSRSFLHLRRNRQALPREAR*
Ga0105247_110850411	3300009101	Switchgrass Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR*
Ga0075423_101113184	3300009162	Populus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAESGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105241_102828693	3300009174	Corn Rhizosphere	RCMSLITNPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105241_104161812	3300009174	Corn Rhizosphere	MSLITNPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105242_106020612	3300009176	Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLQAHRSRSFLHLRRNRQALPREAR*
Ga0105248_128504061	3300009177	Switchgrass Rhizosphere	MSLITDPTLRFGEGVTPVSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0105238_114199293	3300009551	Corn Rhizosphere	FNIDSNLRLELGRQRGAELIQRAHQDKLEHGLSAEIANDAGLQAHRSRSFLHLRRNRQALPREAR*
Ga0105249_109824261	3300009553	Switchgrass Rhizosphere	VSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQAFPREAR*
Ga0127503_110118481	3300010154	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLERGLSDEIANDPGPLPNPSRSILLRRNRQALP
Ga0134128_128391411	3300010373	Terrestrial Soil	MLRLGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0134126_105778382	3300010396	Terrestrial Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQAFPREAR*
Ga0134124_108031401	3300010397	Terrestrial Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHGLSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0134121_119245132	3300010401	Terrestrial Soil	MLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRSRSFLHLRRNRQALPREAR*
Ga0134123_118350801	3300010403	Terrestrial Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLPAHQPRSFLHLRRN
Ga0105246_102333844	3300011119	Miscanthus Rhizosphere	VSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0150985_1230121311	3300012212	Avena Fatua Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAHRDKLEHALSAEIANDAGLQPHRSRSFLHLRRNRQALPRGAR*
Ga0157302_101999941	3300012915	Soil	MSLITDPTLRFGEEVTRMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQPRSFLHLRRNRQALPREAR*
Ga0164300_100326772	3300012951	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSADIANDAGLQPPRSRSFLHLRRNRQALPREAR*
Ga0164300_100458253	3300012951	Soil	SFNIDSNLRLEFGRQRQAELLQRAQRDRLEHALSAEIANGAGLQQNQSRSLLHLRRNRQALPREAR*
Ga0164298_101914471	3300012955	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDRLEHALSAEIANDAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0164298_103648872	3300012955	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHGLSAEIANDAGPHQNQSRSFLHLRRNRQALPREAR*
Ga0164298_106323393	3300012955	Soil	MSFNIDSNLRLELGRQRQAKLLQQAQRDKREHPLLAEIAHDPGLQPHRSRSFLHLRRNRQALPREAR*
Ga0164303_100172633	3300012957	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0164303_100677722	3300012957	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDARLHQNQSRSFLHLRRNRQALPREAR*
Ga0164299_100033111	3300012958	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDRLEHAISAEIANDAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0164299_100530961	3300012958	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDRLEHALSAEIAYDAGPHKNQSRSFLHLRRNRQALPREAR*
Ga0164299_107259081	3300012958	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSADIANDAGLQPHRSRSFLHLRRNRQALPREAR*
Ga0164302_112170751	3300012961	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALLAESAGDAGPQPHQSRSIRLRRNRQALPREAR*
Ga0164309_100690163	3300012984	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDRLEHALSAEIANGAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0164308_100252952	3300012985	Soil	MSFNIDSNLRLELGRQRQAELLQHAHRDKREHALIAEIAHDPGLQPQRSRSFLHLRRNRQALPREAR*
Ga0164304_109047503	3300012986	Soil	MSFNIDSNLRLELGRQRQAELLQQAQRDKREHPLLAEIAHDPGLQPHRSRSFLHLRRNRQALPREAR*
Ga0164307_101676323	3300012987	Soil	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAESANDAGLQPHRSRSFLHLRRNRQALPREAR*
Ga0164307_110219581	3300012987	Soil	MSFNIDSNVRLELGRQRQAELLQHAHRDKREHALIAEIAHDPGLQRQRSRSFLHLRRNRQALPGEAR*
Ga0164305_100324954	3300012989	Soil	FGRQRQAELLQRAQRDKLEHAFSADIANDAGLQAHQSRSFLHLRRNRQALPREAR*
Ga0164305_105012721	3300012989	Soil	GDTQMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALPADIANDAGLQPHRSRSFLHLRRNRQAVPREAR*
Ga0164305_116547771	3300012989	Soil	TLCFGKEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDRLEHALSAEIANDAGLHQNQSRSFLHLRRNRQALPREAR*
Ga0157373_106357141	3300013100	Corn Rhizosphere	MSLITNPTLRFGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQAFPREAR*
Ga0157370_103555371	3300013104	Corn Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQALPREAR*
Ga0157369_104856963	3300013105	Corn Rhizosphere	ITDPTLRFGKEVTHMSFNTDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQAFPREAR*
Ga0163162_102806761	3300013306	Switchgrass Rhizosphere	FGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0157372_104161064	3300013307	Corn Rhizosphere	IHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR*
Ga0157375_104160663	3300013308	Miscanthus Rhizosphere	VGFNIDSNLRLEFGRQRGAELLQRAQRDKLEHALSAEIANDAGLQAHRSRSFLHLRRNRQAFLRKAR*
Ga0132258_101107363	3300015371	Arabidopsis Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHSLSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0132257_1008722971	3300015373	Arabidopsis Rhizosphere	MSLNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAESGNDAGLRAHQSRSFLHLRRNRQALPREAR*
Ga0163161_106007452	3300017792	Switchgrass Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLQAHQSRSFLHLRRNRQALPREAR
Ga0206356_105174601	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSLITDPTLRFGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR
Ga0206353_100612802	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSLITDPTLRFGEGVTPVSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0207688_100221552	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLPAHQPRSFLHLRRNRQALPREAR
Ga0207699_108739832	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSRITDSTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0207695_112534602	3300025913	Corn Rhizosphere	VGFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR
Ga0207671_102983143	3300025914	Corn Rhizosphere	MSLITDPTLRFGEEVTPMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0207693_101725033	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSHTKPSTLRFGKEVTHMSFNIDSNLRLELGRRRQADLLQRAQRDRLERGLSDEIANDPGPLPHQSRSILLRRNRQALPREVR
Ga0207693_104745092	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSHNRLDLTFRKGGDTQMSFNIDSNLRLEFGRQRQAELLQQAQRDRLERGLLDEIANDSSSLPHPSRSILLRRNRQALPGEAR
Ga0207662_108543042	3300025918	Switchgrass Rhizosphere	MSFNIDSNLRLELGRQRGAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR
Ga0207694_100896621	3300025924	Corn Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQALPREAR
Ga0207694_109989212	3300025924	Corn Rhizosphere	MSLITNPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALP
Ga0207650_116075221	3300025925	Switchgrass Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHVRRNRQ
Ga0207687_101481331	3300025927	Miscanthus Rhizosphere	EVIHVSFNIDSNLRLELGRQRGAELIQRAHQDKLEHGLSAEIANDAGLQAHRSRSFLHLRRNRQALPREAR
Ga0207700_105919322	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0207700_111754432	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSFNIDSNLRLELGRQRQAELLQHAHRDKREHALIAEIAHDSGLQPQRSRSFLHLRRNRHALPGEAR
Ga0207664_110205792	3300025929	Agricultural Soil	MSLITDPMLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR
Ga0207686_117430452	3300025934	Miscanthus Rhizosphere	VTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRSRSFLHLRRNRQAFPREAR
Ga0207711_109210161	3300025941	Switchgrass Rhizosphere	MSLITDPMLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLQAHQSRSFLHLRRNRQALPREAR
Ga0207651_105983422	3300025960	Switchgrass Rhizosphere	MSLITDPTLRFGEGVTPVSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQALPREAR
Ga0207703_114376211	3300026035	Switchgrass Rhizosphere	MSLITDPTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0207678_107952793	3300026067	Corn Rhizosphere	IDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIANDAGLRAHQPRSFLHLRRNRQALPREAR
Ga0207702_100199436	3300026078	Corn Rhizosphere	MSLITDLTLRFGEEVTHMSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHRPRSFLHLRRNRQALPREAR
Ga0207683_101511262	3300026121	Miscanthus Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGSDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0268266_103458441	3300028379	Switchgrass Rhizosphere	MSFNIDSNLRLEFGRQRQAELLQRAQRDKLEHALSAEIGNDAGLRAHQSRSFLHLRRNRQALPREAR
Ga0307469_122932441	3300031720	Hardwood Forest Soil	MSFNIDSNLRLELGRQRGAELIQRAQQDKREHGLSAEIANDAGLQAHQSRSFLHLR
Ga0308175_1021865031	3300031938	Soil	MSLITHPTLRFGKEVTHMSFNIDSNLRLEFGRQRQAELLHQAQRHQLGHALSAEIALDAGLQPHPSRSIRLRRNRQALPREAR
Ga0308176_128156211	3300031996	Soil	MSLITHPTLRFGKEVTHMSFNIDSNLRLEFGRQRQAELLHQAQQAQLERALSAEIALRAGPQPHPSRSIRLRRNRQALPREAG
Ga0308173_102459061	3300032074	Soil	MSLITDPTLRIGKEVTHMSFNIDSNLRLEFGRQRQAELLHQAQRDRREHALLAETGGDLGSHPHPSRSFLHLRRNRQALPREAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071504

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences