Metagenome / Metatranscriptome Family F071569

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	85 residues
Representative Sequence	DVMQTLRERREQGFAKGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Number of Associated Samples	101
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.84 %
% of genes near scaffold ends (potentially truncated)	87.70 %
% of genes from short scaffolds (< 2000 bps)	90.16 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.148 % of family members)
Environment Ontology (ENVO)	Unclassified (37.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.836 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.90% β-sheet: 24.76% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
b.113.1.1: N-terminal domain of MutM-like DNA repair proteins	d1r2za2	1r2z	0.63
b.113.1.1: N-terminal domain of MutM-like DNA repair proteins	d1tdza2	1tdz	0.61
b.113.1.1: N-terminal domain of MutM-like DNA repair proteins	d1k3xa2	1k3x	0.6
d.20.1.1: UBC-like	d2f4wa1	2f4w	0.6
d.38.1.0: Thioesterase/thiol ester dehydrase-isomerase	d3lmba_	3lmb	0.6

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF03176	MMPL	4.92
PF01939	NucS	3.28
PF10502	Peptidase_S26	3.28
PF13191	AAA_16	1.64
PF00903	Glyoxalase	1.64
PF14026	DUF4242	1.64
PF00425	Chorismate_bind	0.82
PF00106	adh_short	0.82
PF00293	NUDIX	0.82
PF01243	Putative_PNPOx	0.82
PF00486	Trans_reg_C	0.82
PF02625	XdhC_CoxI	0.82
PF08031	BBE	0.82
PF13673	Acetyltransf_10	0.82
PF00296	Bac_luciferase	0.82
PF12681	Glyoxalase_2	0.82
PF13424	TPR_12	0.82
PF00753	Lactamase_B	0.82
PF00016	RuBisCO_large	0.82
PF07883	Cupin_2	0.82
PF07730	HisKA_3	0.82
PF07690	MFS_1	0.82
PF00931	NB-ARC	0.82
PF05157	T2SSE_N	0.82
PF00009	GTP_EFTU	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	4.92
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	4.92
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	3.28
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.82
COG1850	Ribulose 1,5-bisphosphate carboxylase, large subunit, or a RuBisCO-like protein	Carbohydrate transport and metabolism [G]	0.82
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.82
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.82
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.82
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.82
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.16 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	71.31 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	69.67 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.67 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.67 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	1.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.67 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1.64 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02H2RQK	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
2170459021\|G14TP7Y01EG13R	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101618914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300000880\|AL20A1W_1123764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1027	Open in IMG/M
3300000881\|JGI10215J12807_1089376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1265	Open in IMG/M
3300000953\|JGI11615J12901_10475801	All Organisms → cellular organisms → Bacteria → Terrabacteria group	506	Open in IMG/M
3300000955\|JGI1027J12803_108466685	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1173	Open in IMG/M
3300005176\|Ga0066679_10075210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300005181\|Ga0066678_11111668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300005181\|Ga0066678_11119331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300005330\|Ga0070690_100018738	All Organisms → cellular organisms → Bacteria	4186	Open in IMG/M
3300005338\|Ga0068868_100520627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300005343\|Ga0070687_101002291	All Organisms → cellular organisms → Bacteria → Terrabacteria group	605	Open in IMG/M
3300005438\|Ga0070701_10755429	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300005545\|Ga0070695_100477653	All Organisms → cellular organisms → Bacteria → Terrabacteria group	960	Open in IMG/M
3300005553\|Ga0066695_10719730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005553\|Ga0066695_10735446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005558\|Ga0066698_10374448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300005563\|Ga0068855_101348080	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300005563\|Ga0068855_101778123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300005574\|Ga0066694_10561659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005842\|Ga0068858_100608630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300005983\|Ga0081540_1006361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8620	Open in IMG/M
3300006046\|Ga0066652_101154958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300006046\|Ga0066652_101885007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300006173\|Ga0070716_100430879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300006175\|Ga0070712_101328107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300006800\|Ga0066660_10782168	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006800\|Ga0066660_11179832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300006881\|Ga0068865_102191601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300006904\|Ga0075424_100911582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300009012\|Ga0066710_103254579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300009162\|Ga0075423_11425116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300010036\|Ga0126305_10780888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300010107\|Ga0127494_1048832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300010108\|Ga0127474_1058204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300010127\|Ga0127489_1105402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300010130\|Ga0127493_1169103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300010360\|Ga0126372_11658516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300011000\|Ga0138513_100018909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300012001\|Ga0120167_1022709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1561	Open in IMG/M
3300012096\|Ga0137389_11142723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300012189\|Ga0137388_11904426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300012198\|Ga0137364_10646164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300012200\|Ga0137382_10596627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300012201\|Ga0137365_11201167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012285\|Ga0137370_10512416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300012285\|Ga0137370_10646096	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300012354\|Ga0137366_10052474	All Organisms → cellular organisms → Bacteria	3128	Open in IMG/M
3300012356\|Ga0137371_10006916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8818	Open in IMG/M
3300012356\|Ga0137371_10547697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300012356\|Ga0137371_10614909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300012356\|Ga0137371_11448553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300012389\|Ga0134040_1037053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300012400\|Ga0134048_1254891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300012897\|Ga0157285_10104720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300012901\|Ga0157288_10012000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1472	Open in IMG/M
3300012911\|Ga0157301_10048865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300012914\|Ga0157297_10003142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3228	Open in IMG/M
3300012955\|Ga0164298_11007669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012972\|Ga0134077_10491145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012975\|Ga0134110_10449226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012977\|Ga0134087_10629531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012988\|Ga0164306_11327386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300013307\|Ga0157372_11048210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300013766\|Ga0120181_1080563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300013770\|Ga0120123_1135925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300014497\|Ga0182008_10627895	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300015077\|Ga0173483_10015557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2638	Open in IMG/M
3300015358\|Ga0134089_10493358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300018028\|Ga0184608_10341610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300018028\|Ga0184608_10371738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300018028\|Ga0184608_10451955	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300018067\|Ga0184611_1029733	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300018081\|Ga0184625_10161552	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300018081\|Ga0184625_10283933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300018081\|Ga0184625_10333355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300018433\|Ga0066667_10460217	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1041	Open in IMG/M
3300018482\|Ga0066669_10021814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3600	Open in IMG/M
3300019767\|Ga0190267_11228286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300019869\|Ga0193705_1012450	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300021078\|Ga0210381_10145518	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300022694\|Ga0222623_10137376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300022892\|Ga0247753_1009129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1005	Open in IMG/M
3300023066\|Ga0247793_1032216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300023077\|Ga0247802_1007480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1378	Open in IMG/M
3300025898\|Ga0207692_10145259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1353	Open in IMG/M
3300025899\|Ga0207642_10012082	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300025922\|Ga0207646_11401497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300025927\|Ga0207687_10629001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300026035\|Ga0207703_10692804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300026326\|Ga0209801_1321815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300027882\|Ga0209590_10757493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300028710\|Ga0307322_10032438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300028711\|Ga0307293_10017264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2089	Open in IMG/M
3300028711\|Ga0307293_10292142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300028713\|Ga0307303_10167862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300028717\|Ga0307298_10059586	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300028718\|Ga0307307_10000585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8563	Open in IMG/M
3300028718\|Ga0307307_10193890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028755\|Ga0307316_10074911	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300028768\|Ga0307280_10323921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028778\|Ga0307288_10288737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300028784\|Ga0307282_10440721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300028787\|Ga0307323_10032050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1826	Open in IMG/M
3300028787\|Ga0307323_10094452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300028791\|Ga0307290_10179859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300028793\|Ga0307299_10067246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1327	Open in IMG/M
3300028819\|Ga0307296_10157350	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300028819\|Ga0307296_10373800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300028828\|Ga0307312_10561499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300028828\|Ga0307312_11068089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300028876\|Ga0307286_10137499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300028876\|Ga0307286_10177027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300028881\|Ga0307277_10562852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028884\|Ga0307308_10009554	All Organisms → cellular organisms → Bacteria	4281	Open in IMG/M
3300028884\|Ga0307308_10159359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300028884\|Ga0307308_10512961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300028885\|Ga0307304_10545442	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300031058\|Ga0308189_10399577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300031226\|Ga0307497_10165796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300033412\|Ga0310810_11068482	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.70%
Host-Associated	Host-Associated	10.66%
Engineered	Engineered	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.33%
Plants	Host-Associated → Plants	10.66%
Aquatic	Environmental → Aquatic	7.38%
Solid Waste	Engineered → Solid Waste	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.51%
Sediment	Environmental → Aquatic → Sediment	6.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.10%
Grass	Engineered → Solid Waste → Grass	1.64%
Freshwater	Environmental → Aquatic → Freshwater	0.82%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.56%
Loam	Environmental → Terrestrial → Soil → Loam	6.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.10%
Composting	Engineered → Solid Waste → Grass → Composting	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.10%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.46%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_01601510	2170459015	Switchgrass, Maize And Mischanthus Litter	RERYEQGFAKGRLEFRDGGQDALIVVAHPSEIGGAEWPAEVATVMRFRDGKVVSMQDYPTVAEARDAVPVS
4NP_02338150	2170459021	Switchgrass, Maize And Mischanthus Litter	EEILDRNVEWRATEPGESDCHGRDDVMQTLRERYEQGFAKGDLQFRDGGEYAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYGTEAEALAAVEQK
INPhiseqgaiiFebDRAFT_1016189141	3300000364	Soil	DFGTVEEILDINVVWHATEPGEWDCHGRDEVMQTLRERYEQGFAKGDLQFREGGADAVIVIAHPSEIGGPDWPDEAVTVMNFRNDRVASMQDYRTEAEALAVVGPA*
AL20A1W_11237642	3300000880	Permafrost	MRTLRERYEQGFAKGKLEFRDGGEDALIVISHPSEIGGPEWPAETATIMRFREGKVVSMQDYPSEAEALAAVPAE*
JGI10215J12807_10893764	3300000881	Soil	DVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
JGI11615J12901_104758011	3300000953	Soil	DVMQTLRERREQGFAKGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
JGI1027J12803_1084666852	3300000955	Soil	EPGDWDCHNREDVMQVLRQRFEQGFAKGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTETEALAAAGQT*
Ga0066679_100752104	3300005176	Soil	QGFATGALEFRDVGGDIVIVVSHPSEIGGSEWPAETTTVMRFRDGKVVSMWDYRTEPEALAAFAASRTIAS*
Ga0066678_111116681	3300005181	Soil	RERYEQGFARGELEFRDGGEQAVIVVSHPSQIGGPEWPSETATVMQFRNERVVAMRDYRTEAEAIAALEQR*
Ga0066678_111193311	3300005181	Soil	REDVMRTLRERYEQGFAKGKLEFKHGGEDAIIVVSHPSEIGGPDWPAETATIMRFHRGKVVAMEDYRTEADALEAAGSV*
Ga0070690_1000187383	3300005330	Switchgrass Rhizosphere	MRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQARVVSMQDYRTEAEALDAVPTA*
Ga0068868_1005206271	3300005338	Miscanthus Rhizosphere	ETIERMLDPNVEWRWFEPGDWDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTETEALAVAGQT*
Ga0070687_1010022911	3300005343	Switchgrass Rhizosphere	MLDPNVEWRWFEPGDWDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT*
Ga0070701_107554291	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	GDFETIERMLDPNVEWRWFEPGDWDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT*
Ga0070695_1004776532	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ETIERMLDPNVEWRWFEPGDWDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT*
Ga0066695_107197301	3300005553	Soil	DFGTVEEILDRNVVWHATEPGEWDCHGRDEVMQTLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGPDWPSEIATVMQFRNERVVLMQDYGTEAEALAAVEQK*
Ga0066695_107354461	3300005553	Soil	CHGREDVLRTLRERHAQGFAAGLLEFRDSGENTVIVVSHPSEIGGPEWPAETATVMRFRDSKVVSMQDYPSEQDAFAALVNN*
Ga0066698_103744481	3300005558	Soil	FARGELEFRDGGDQAVIVVSHPSEIGGTDWPSETATVMQFRNERVVSMRDYRTEAEAIAAVEQR*
Ga0068855_1013480801	3300005563	Corn Rhizosphere	WDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT*
Ga0068855_1017781231	3300005563	Corn Rhizosphere	EVMETLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGSEWPSEIATVMQFRNERVVLMQDYRTEAEALAAVEQT*
Ga0066694_105616591	3300005574	Soil	WRWFEPGQWDCHGRDDVIRTLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPAWPSETATVMQFRNERVVAMQDYRTEAEAIAAVEQR*
Ga0068858_1006086301	3300005842	Switchgrass Rhizosphere	EPGEWDCRNREDVMRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQARVVSMQDYRTEAEALDAVPTA*
Ga0081540_10063614	3300005983	Tabebuia Heterophylla Rhizosphere	MLDPDVEWRASEPGEWDCQGRDEVMQTIRERYEQGFAKGDVQWREVGDDAVVVVAHPSEIGGPGWPDETATVMTFRHARIISMQDYRTEAEALAAAGKA*
Ga0066652_1011549581	3300006046	Soil	FEPSEWDCRSREDVMRTLRERYEQGFAKGEVEIRDGSDDAIIVVTHPAEIGGPEWPAETATIMRFRDGRVVSMRDYQTEVEAQGAAVS*
Ga0066652_1018850071	3300006046	Soil	VMRTLRERYDQGFAKGNTEFRDAGENAVIVVSHPSEIGGPEWPAETATLMKFRGGHVVSMQDYRTEADARAATEKT*
Ga0070716_1004308792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MQTLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGPDWPSEIATVMQFRNERVVLMQDYGTEAEALAAVEQK*
Ga0070712_1013281072	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT*
Ga0066660_107821681	3300006800	Soil	DVVLRTLRERYAQGFAAGSLEFRDVSDDTVIVVSRPSEIGGAEWPPETATVMRFRSGNVVSMQDYRNELEALAAVAVK*
Ga0066660_111798322	3300006800	Soil	FEPGDWDCRGREDVMRTLRERYAQGFAKGDLEFRDGGADAVIVVAHPSEIGGPEWSAETATVMKFRGEKVVSMQDYRTEAEALDAVK*
Ga0068865_1021916012	3300006881	Miscanthus Rhizosphere	DVVWHATEPGEWDCHGRDEVMQTLRERYEQGFGEGELRFREGGRHAVIVVAHPSEIGGSDWPSEIATVLQFRNERVVSMRDYRTEAEALAAVEPE*
Ga0075424_1009115823	3300006904	Populus Rhizosphere	GTEPGEWDCHGRNDVMQTLRERHEQGFANGDLQFLEGGEDAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEALAAVEQR*
Ga0066710_1032545791	3300009012	Grasslands Soil	REDVMRTLRERYDQGFGKGRLEFKDGGENAVIVVSHPSEIGGPEWPDETATVMRFRQGRVVSMQDYRTEAEAVDAVPAT
Ga0075423_114251161	3300009162	Populus Rhizosphere	HGRDEVMQTLRDRYEQGFAKGEVQFRDGGEHAVIVVAHPSEIGGSDWPSEIATVMHFRNERVVSMQDYRTEAEALAAVEPT*
Ga0126305_107808881	3300010036	Serpentine Soil	ILDRNVEWHATEPGEWDCHGRDDVMQTLRERYEQGFAKGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEALAAVEQR*
Ga0127494_10488322	3300010107	Grasslands Soil	TLRERHAEGFAAGALEFRDVGGDTVIVVSHPSQIGGPEWPAETATVMRFRNEKVVSMQDYRTEREALAAVAASAG*
Ga0127474_10582042	3300010108	Grasslands Soil	GFAAGALEFRDVGGDTVIVVSHPSQIGGPEWPAETATVMRFRNEKVVSMQDYRTEREALAAVAASAG*
Ga0127489_11054021	3300010127	Grasslands Soil	WTLRARHAQGFAAGALEFRDVGGDIVIVVSYPSQIGGPEWPAETATVMRFRNEKVISMQDHRTEREALAAVAAAT*
Ga0127493_11691031	3300010130	Grasslands Soil	MRTLRERHAEGFAAGALEFRDVGGDTVIVVSHPSQIGGPEWPAETATVMRFRNEKVISMQDHRTEREALAAVAAN*
Ga0126372_116585161	3300010360	Tropical Forest Soil	MLDPNVEWRASEPGEWDCHGRDEVMRTIRARYEQGFAKGDVRSREVGDDAVVIVAHPSEIGGPDWPDETATVMTFRGDHIISMQDYRREAEALAAAANA*
Ga0138513_1000189091	3300011000	Soil	MRVLRERYEQGFAKGRLEFQDGGQDALIVVAHPSEIGGAEWPAEVATVMRFRGGKVVSMQDYPTMAEARAAVPAS*
Ga0120167_10227092	3300012001	Permafrost	VGLQNREDVMRTLRERYEQGFAKGKLEFRDGGEDALIVISHPSEIGGPEWPAETATIMRFREGKVVSMQDYPSEAEALAAVPAE*
Ga0137389_111427231	3300012096	Vadose Zone Soil	LAHLLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEVEAIAAVEQR*
Ga0137388_119044261	3300012189	Vadose Zone Soil	GEWDCRGRDDVIRTLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0137364_106461641	3300012198	Vadose Zone Soil	TLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPAWPSETATVMQFRNERVVAMQDYRTEAEAIAAVEQR*
Ga0137382_105966271	3300012200	Vadose Zone Soil	DFETIEEILDPNVEWRWFEPGEWDCHGRDDVIRTLRERYDHGFASGELEFREGGEQAVIIVSHPNEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0137365_112011671	3300012201	Vadose Zone Soil	MQTIRERYKQGFAKGDVQFRDGGEDTVIVVAHPSEIGGPDCPDETATVMKVRDERVVSMQDYR
Ga0137370_105124161	3300012285	Vadose Zone Soil	EGGWFEPGELDCHNRDDVMRTLRERYEQGFAKGRLEFKDVGENAVIVVSRPSEIGGPEWPEETVTIMRFRDGKVVSMRDYRTEADALRASGA*
Ga0137370_106460961	3300012285	Vadose Zone Soil	RRGEFEVIEAMLDPEVEWGWFEPGEWDCHNRDDVMRTLRERHAQGFHRGGLEFLEAGDDSVMVVAHPRAIGGEEWPEETATLIVFRDGRVISMRDYPTRAEALAAAP*
Ga0137366_100524741	3300012354	Vadose Zone Soil	QGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNKRVVSMQDYRTEAEAIAAVNQS*
Ga0137371_100069161	3300012356	Vadose Zone Soil	RYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPAWPSETATVMQFRNERVVAMQDYRTEAEAIAAVEQR*
Ga0137371_105476971	3300012356	Vadose Zone Soil	QGFAKGRLEFKDGGEDAIIVVSHPSEIGGPEWPDETATLMRFRQARVVSMQDYRTEAEALDAAPAA*
Ga0137371_106149092	3300012356	Vadose Zone Soil	MQTIRERYEQGVAKGDVQFRDGGEDTVIVVAHPSEIGGPDCPDETATVMKVRDERVVSMQDYRTETEALEAVAQA*
Ga0137371_114485531	3300012356	Vadose Zone Soil	EWGWFEPGEWDCKNRDDVMRTLRERYEQGFAKGRLEFKDGGEDVVIVVSHPSEIGGPEWPEETVTIMRFRDGKVVSMRDYRTEADALRASGA*
Ga0134040_10370532	3300012389	Grasslands Soil	VMRTLRERHAEGFAAGALEFRDVGGDTVIVVSHPSQIGGPEWPAETATVMRFRNEKVVSMQDYRTEREALAAVAASAG*
Ga0134048_12548911	3300012400	Grasslands Soil	AQGFAAGALEFRDVGGDIVIVVSYPSQIGGPEWPAETATVMRFRNEKVISMQDHRTEREALAAVAAAT*
Ga0157285_101047201	3300012897	Soil	ETIEEILDPNVEWCATEPGEWDCHGRDDVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0157288_100120001	3300012901	Soil	GFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0157301_100488651	3300012911	Soil	NVEWHATEPGEWYCHGRDDVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0157297_100031421	3300012914	Soil	QGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0164298_110076691	3300012955	Soil	RDDVMQTLRERYEQGFVSGDLQLRNGGAEAVIVVAHPSEIGGPDWPDETATVIKFQGDRVVSMQDYATEAEALAAAQTEP*
Ga0134077_104911451	3300012972	Grasslands Soil	NVEWRWFEPGQWDCHGRDDVIRTLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPAWPSETATVMQFRNERLVSMQDYRTEAEAIAALEQR*
Ga0134110_104492261	3300012975	Grasslands Soil	FARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVAMQDYRTEAEAIAAVEQR*
Ga0134087_106295311	3300012977	Grasslands Soil	LRERYEQGFAKGRLEFKDGGEDAIVVVSHPREIGGPDWPAETATIMRFSDGKVVSMEDYRTEADALKAAGS*
Ga0164306_113273861	3300012988	Soil	GGLVSLAQGRLRDGRGNLDPNVEWHATEPGEWDCHGRDEVMQTLRERHEQGFAKGDMQFREGGENAVIVVAHPSEIGGSDWPAEIATVMRFRNERVVSMQDYRTEAEAVAAVAQT*
Ga0157372_110482102	3300013307	Corn Rhizosphere	LERILDPDVEWHWFEPGEWDCRNREDVMRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQGRVVSMQDY
Ga0120181_10805631	3300013766	Permafrost	EQGFAKGKLEFRDGGEDALIVISHPSEIGGPEWPAETATIMRFREGKVVSMQDYPSEAEALAAVPAE*
Ga0120123_11359252	3300013770	Permafrost	YDHGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVAMQDYRTEAEAIAAVEQR*
Ga0182008_106278951	3300014497	Rhizosphere	MREQPLDLARGEIVFRDAGEDAVIVVSHPSEIGGSEWPAETATVVTFRGDRVVSMQDYRTEAEARAAVAPE*
Ga0173483_100155574	3300015077	Soil	ERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR*
Ga0134089_104933582	3300015358	Grasslands Soil	RILDPDVEWRWFEPGEWDCRNREDVMRTLRERYDQGFAKGRLEFKDGGENAVIVVSHPSEIGGSECPDETATVMRFRQGRVVSMQDYRTEAEALDAVPAT*
Ga0184608_103416102	3300018028	Groundwater Sediment	DCHGRDDVIRTLRERYDQGFAGGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0184608_103717381	3300018028	Groundwater Sediment	PNVEWRWFEPGEWDCHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0184608_104519552	3300018028	Groundwater Sediment	METLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKIGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0184611_10297333	3300018067	Groundwater Sediment	CHGRDEVMQTLRERYEQGFAKGDLHFREGGEHAVIVVAHPSEIGGSDWPSEIATVMQFRNERVVSMQDYRTEAEALAAVAQT
Ga0184625_101615521	3300018081	Groundwater Sediment	QGFAKGDMTFRGSGESTVVVVTNPSKIGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0184625_102839332	3300018081	Groundwater Sediment	FGTVEEILDRNVVWHATEPGEWDCHGRDEVMQTLRERYEQGFAKGDLHFREGGEHAVIVVAHPSEIGGSDWPSEIATVMQFRNERVVSMQDYRTEAEALAAVEQK
Ga0184625_103333551	3300018081	Groundwater Sediment	DVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0066667_104602171	3300018433	Grasslands Soil	MFDPAATWHWYEPGEWDCENRDDVLRTLRERYQQGFARADVELVDAGPDAVVLVSHPSEIGGDEWPDETATLVRFRADSVVAMQDFKTRDEALAASRGEG
Ga0066669_100218143	3300018482	Grasslands Soil	ERYSQGFAKGDVEFRDGGEDAVIVVTHPREIGGPEWPAETATIMRFRDGRVVSMRDYQTEIEAQMVAGSR
Ga0190267_112282862	3300019767	Soil	RYEQGFAKGDLQFRDGGEHAVIVVAHPSEIGGSDWPSEIATVMKFRNERVVSMQDYRTEAEALAAVEQT
Ga0193705_10124504	3300019869	Soil	PNIEWRGFEPGEGYCGNREDVMETLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKLGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0210381_101455181	3300021078	Groundwater Sediment	REDVMETLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKLGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0222623_101373762	3300022694	Groundwater Sediment	GEWDCHGRGEVMETLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGSEWPSEIATVMQFRNERVVLMQDYRTEAEALAAVEQK
Ga0247753_10091291	3300022892	Soil	ATEPGEWDCHGRDDVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0247793_10322162	3300023066	Soil	CATEPGEWDCHGRDDVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0247802_10074801	3300023077	Soil	RDDVMQTLRERHEQGFANGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0207692_101452593	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FEPGEWDCRNREDVMRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQARVVSMQDYRTEAEALDAVPTA
Ga0207642_100120821	3300025899	Miscanthus Rhizosphere	CRNREYVMRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQARVVSMQDYRTEAEALDAVPTA
Ga0207646_114014972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YEQGFAKGDLEFREGGEAAVIVVAHPSEIGGPDWPSEAATVMHFRNERVVSMQDYRTEAEAIAAVEQR
Ga0207687_106290011	3300025927	Miscanthus Rhizosphere	PGDWDCRNREDVMQVLRQRFEQGFANGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTEADALAAAGQT
Ga0207703_106928043	3300026035	Switchgrass Rhizosphere	DPDVEWHWFEPGEWDCRHREDVMRTLRERYEQGFAKGRLEFKDGGENAIIVVSHPSEIGGPEWPDETATLMQFRQARVVSMQDYRTEAEALDAVPTA
Ga0209801_13218151	3300026326	Soil	CKNRDDVMRTLRERYEQGFAKGKLEFKHGGEDAIIVVSHPSEIGGPDWPAETATIMRFHRGKVVAMEDYRTEADALEAAGSV
Ga0209590_107574931	3300027882	Vadose Zone Soil	RILDSAVTWRWFEPGEWDCNGREDVMRTLRDRYEQGFAKGDLTFHEAADDAVVVVSHPSEIGGPEWPDETATVMRFREGKVVTMQDYQTEAEALASLLSV
Ga0307322_100324381	3300028710	Soil	NVEWHATERGEWDCHGRDDVIRTLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEQR
Ga0307293_100172643	3300028711	Soil	METLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGSEWPSEIATVMQFRNERVVLMQDYRTEAEALAAVEQK
Ga0307293_102921421	3300028711	Soil	QTLCERHEQGFAKGDLQFREGGEHAVIVVAHPGEIGGPDWPSETATVMQFRNERLVSMQDYRTEAEAIAAVEQK
Ga0307303_101678621	3300028713	Soil	DPNVEWRWFEPGEWDCHGRDDVIRTLRERYDQGFARGELEFRDGGEQAVIVVSHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAAVEMR
Ga0307298_100595862	3300028717	Soil	EDVMETLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKLGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0307307_100005859	3300028718	Soil	DVMRVLRERYEQGFAKGRLEFQEGGQDALIVVAHPGEIGGEEWPAEVATVMRFRDGRVVSMQDYLTESDAMNAVGGDQSG
Ga0307307_101938902	3300028718	Soil	LPRRGTFPNTGAREKPDAWRWFEPGEWDCHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307316_100749112	3300028755	Soil	NVEWRGFEPGEGYCGNREDVMETLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKLGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0307280_103239211	3300028768	Soil	VMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307288_102887371	3300028778	Soil	DFDTIQEIRDPNVEWRWFEPGEWDCHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307282_104407211	3300028784	Soil	FLDPDVEWFWFEPGDWDCHNRDDVMRVLRERYEQGFAKGRLEFQDGGQDALIVVAHPSEIGGAEWPAEVATVMRFRGGKVVSMQDYPTMAEARDAVPAS
Ga0307323_100320501	3300028787	Soil	RHEQGFAKGDLQFLEGGEHAVIVVAHPSEIGGPDWPSETATVMQFRNERVVSMQDYRTEAEAIAALEQR
Ga0307323_100944522	3300028787	Soil	IEEILDPNVEWHATEPGEWDCHGRDDVMQTLRERHEQGFAKGDLQFREGGEHAVIVVAHPGEIGGPDWPSETATVMQFRNERLVSMQDYRTEAEAIAAVEQK
Ga0307290_101798592	3300028791	Soil	GVEWRAFEPGEWDCHNRDDVMRVLRERYEQGFAKGRLEFQEGGQDALIVVAHPGEIGGEEWPAEVATVMRFRDGRVVSMQDYLTESDAMNAVGGDQSG
Ga0307299_100672461	3300028793	Soil	MRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307296_101573501	3300028819	Soil	PNVEWRGFEPGEGYCGNREDVMETLRARHEQGFAKGDMTFRGSGASAVVVVTHPSKIGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0307296_103738001	3300028819	Soil	GTFPNTGAREKPDAWRWFEPGEWDCHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307312_105614992	3300028828	Soil	RERYDQGFAGGELEFRDGGEQAVIVVSHPSEIGGPEWPSETATVMHFRNERVVSMQDYRTEAEAIAAVEMR
Ga0307312_110680891	3300028828	Soil	LDPDVEWFWFEPGDWDCHNRDDVMRVLRERYEQGFAKGRLEFQDGGQDALIVVAHPSEIGGAEWPAEVATVMRFRGGKVVSMQDYPTMAEARDAVPAS
Ga0307286_101374991	3300028876	Soil	LERFLDPDVEWFWFEPGDWDCHNRDDVMRVLRERYEQGFAKGRLEFQDGGQDALIVVAHPSEIGGAEWPAEVATVMRFRGGKVVSMQDYPTMAEARDAVPAS
Ga0307286_101770272	3300028876	Soil	TIQEILDPNVEWRWFEPGEWDCHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307277_105628521	3300028881	Soil	FWFEPGEWDCHNRDDVMRVLHERYEQGLAKGRLEFHDGGQDALIVVAHPSEIGGAEWPPEVATVMRFRDGKVVSMQDYPTMAEARDAVPAS
Ga0307308_100095544	3300028884	Soil	ERYEQGFAKSDVEFRELGDDAVIVVAHPSEIGGPDWPDETATVMTFRGDRIISMQDYRTEAEALAAAGQA
Ga0307308_101593592	3300028884	Soil	DFETIEEILDPNVEWHATEPGEWDCHGRDDVMQTLRERHEQGFAKGDLQFREGGEHAVIVVAHPGEIGGPDWPSETATVMQFRNERLVSMQDYRTEAEAIAAVEQK
Ga0307308_105129611	3300028884	Soil	RVGLHNRDDVMRTLRERYDQGFALGNVEFRDVGEDAVIVVSHPSEIGGPEWPAETATVMKFRSDRVVSMQDYRTEADARAATGQT
Ga0307304_105454421	3300028885	Soil	NREDVMETLRERHEQGFAKGDMTFRGSGASAVVVVTHPSKLGGPDWPDETATVITFRGDRVASMQDYRTEAEALAAAGQA
Ga0308189_103995771	3300031058	Soil	FGTVEEILDRNVEWHATEPGEWDCHGRGEVMETLRERYEQGFAKGDLQFREGGEHAVIVVAHPSEIGGSEWPSEIATVMQFRNERVVLMQDYRTEAEALAAVEQK
Ga0307497_101657962	3300031226	Soil	FGTVEEILDRNVVWHATEPGEWDCHGRDEVMQTLRERYEQGFAKGDLQFRDGGEHAVIVVAHPRETGGSEWPSEIAIVMRFRNERVVSMQDYRTEAEAFAAVERT
Ga0310810_110684821	3300033412	Soil	PGDWDCHNREDVMQVLRQRFEQGFAKGDVTFRSAGEDAVIVVAHPSEIGGPDWPDETATVMTFRDERVVSMQDYRTETEALAAAGQT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences