Metagenome / Metatranscriptome Family F071697

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071697
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	45 residues
Representative Sequence	NPPEIAYWERGEWWLAGDAKPWQPEAVTVVSDRLVFRPRLTPVA
Number of Associated Samples	94
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.95 %
% of genes near scaffold ends (potentially truncated)	79.51 %
% of genes from short scaffolds (< 2000 bps)	96.72 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.295 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.492 % of family members)
Environment Ontology (ENVO)	Unclassified (24.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.443 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.17% β-sheet: 12.50% Coil/Unstructured: 83.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF05685	Uma2	8.20
PF01724	DUF29	7.38
PF00211	Guanylate_cyc	4.92
PF07589	PEP-CTERM	1.64
PF08240	ADH_N	1.64
PF00072	Response_reg	0.82
PF00496	SBP_bac_5	0.82
PF05239	PRC	0.82
PF13646	HEAT_2	0.82
PF12796	Ank_2	0.82
PF04226	Transgly_assoc	0.82
PF01609	DDE_Tnp_1	0.82
PF11154	DUF2934	0.82
PF02586	SRAP	0.82
PF01565	FAD_binding_4	0.82
PF01695	IstB_IS21	0.82
PF04352	ProQ	0.82
PF13384	HTH_23	0.82
PF13358	DDE_3	0.82
PF13683	rve_3	0.82
PF13340	DUF4096	0.82
PF13007	LZ_Tnp_IS66	0.82
PF07927	HicA_toxin	0.82
PF01068	DNA_ligase_A_M	0.82
PF01527	HTH_Tnp_1	0.82
PF03641	Lysine_decarbox	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	8.20
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	4.92
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.82
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.82
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.82
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.82
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.82
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.82
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.82
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.82
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	0.82
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.82
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.82
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.82
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.82
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
All Organisms	root	All Organisms	37.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
cellular organisms	root	All Organisms → cellular organisms	37.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	18.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.10 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.82 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	14.75 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.64 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.82 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	7.38 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	1.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.82 %
Crenalkalicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus	0.82 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.82 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.82 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	0.82 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.82 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	7.38 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	1.64 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.82 %
Crenalkalicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	0.82 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.82 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.82 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.82 %
Rhodoblastus sphagnicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus sphagnicola	0.82 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.30 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	7.38 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1.64 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.82 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.82 %
Crenalkalicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	0.82 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.82 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.82 %
Rhodoblastus sphagnicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus sphagnicola	0.82 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_101484327	Not Available	501	Open in IMG/M
3300005332\|Ga0066388_103974266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300005345\|Ga0070692_10951516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	597	Open in IMG/M
3300005435\|Ga0070714_100934733	Not Available	842	Open in IMG/M
3300005435\|Ga0070714_102119288	Not Available	548	Open in IMG/M
3300005436\|Ga0070713_100221734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300005436\|Ga0070713_101218945	Not Available	728	Open in IMG/M
3300005439\|Ga0070711_100199387	Not Available	1543	Open in IMG/M
3300005439\|Ga0070711_101719813	Not Available	550	Open in IMG/M
3300005459\|Ga0068867_101230790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	689	Open in IMG/M
3300005534\|Ga0070735_10591907	Not Available	658	Open in IMG/M
3300005537\|Ga0070730_10219100	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005563\|Ga0068855_100097337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3389	Open in IMG/M
3300005564\|Ga0070664_100551403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1066	Open in IMG/M
3300005614\|Ga0068856_100389482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1413	Open in IMG/M
3300006028\|Ga0070717_11141029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	710	Open in IMG/M
3300006028\|Ga0070717_11310790	Not Available	658	Open in IMG/M
3300006028\|Ga0070717_11692192	Not Available	572	Open in IMG/M
3300006058\|Ga0075432_10099744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300006059\|Ga0075017_100413458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1013	Open in IMG/M
3300006163\|Ga0070715_10356440	Not Available	801	Open in IMG/M
3300006175\|Ga0070712_101328476	Not Available	627	Open in IMG/M
3300006175\|Ga0070712_101369100	Not Available	617	Open in IMG/M
3300006237\|Ga0097621_100388579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1247	Open in IMG/M
3300006237\|Ga0097621_101235549	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300006755\|Ga0079222_12151827	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300007788\|Ga0099795_10291674	Not Available	715	Open in IMG/M
3300009098\|Ga0105245_10753765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1010	Open in IMG/M
3300009148\|Ga0105243_12550211	Not Available	551	Open in IMG/M
3300009156\|Ga0111538_12785746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	612	Open in IMG/M
3300009176\|Ga0105242_10649878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1025	Open in IMG/M
3300009177\|Ga0105248_11843850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	686	Open in IMG/M
3300009792\|Ga0126374_11279366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	591	Open in IMG/M
3300010048\|Ga0126373_10738777	Not Available	1044	Open in IMG/M
3300010048\|Ga0126373_12810250	Not Available	543	Open in IMG/M
3300010154\|Ga0127503_10832146	Not Available	575	Open in IMG/M
3300010361\|Ga0126378_10736489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1097	Open in IMG/M
3300010361\|Ga0126378_10965257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	957	Open in IMG/M
3300010361\|Ga0126378_12110554	Not Available	643	Open in IMG/M
3300010361\|Ga0126378_13043698	Not Available	534	Open in IMG/M
3300010366\|Ga0126379_12341716	Not Available	634	Open in IMG/M
3300010375\|Ga0105239_10411353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1532	Open in IMG/M
3300010376\|Ga0126381_101548921	Not Available	958	Open in IMG/M
3300010376\|Ga0126381_102243814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	785	Open in IMG/M
3300010376\|Ga0126381_104695525	Not Available	526	Open in IMG/M
3300010396\|Ga0134126_10957173	Not Available	960	Open in IMG/M
3300010397\|Ga0134124_12265299	Not Available	583	Open in IMG/M
3300012212\|Ga0150985_116841101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	567	Open in IMG/M
3300012989\|Ga0164305_10661795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	848	Open in IMG/M
3300013306\|Ga0163162_11052944	Not Available	921	Open in IMG/M
3300013307\|Ga0157372_12135276	Not Available	643	Open in IMG/M
3300014325\|Ga0163163_11836069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	666	Open in IMG/M
3300014968\|Ga0157379_12625778	Not Available	505	Open in IMG/M
3300014969\|Ga0157376_11005196	Not Available	857	Open in IMG/M
3300014969\|Ga0157376_12019352	Not Available	614	Open in IMG/M
3300015200\|Ga0173480_10234303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	991	Open in IMG/M
3300015371\|Ga0132258_12249955	Not Available	1368	Open in IMG/M
3300015371\|Ga0132258_13479865	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300015372\|Ga0132256_102010052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	684	Open in IMG/M
3300015372\|Ga0132256_103042836	Not Available	564	Open in IMG/M
3300015374\|Ga0132255_102960187	Not Available	725	Open in IMG/M
3300016319\|Ga0182033_11071516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	719	Open in IMG/M
3300016357\|Ga0182032_11812255	Not Available	533	Open in IMG/M
3300016371\|Ga0182034_11679266	Not Available	558	Open in IMG/M
3300016404\|Ga0182037_11626723	Not Available	575	Open in IMG/M
3300016422\|Ga0182039_10652499	Not Available	924	Open in IMG/M
3300016422\|Ga0182039_11244190	Not Available	673	Open in IMG/M
3300016445\|Ga0182038_11731731	Not Available	563	Open in IMG/M
3300018476\|Ga0190274_11871036	Not Available	695	Open in IMG/M
3300020582\|Ga0210395_10105680	Not Available	2083	Open in IMG/M
3300020583\|Ga0210401_10409517	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300020583\|Ga0210401_11206866	Not Available	615	Open in IMG/M
3300021374\|Ga0213881_10533575	Not Available	533	Open in IMG/M
3300021403\|Ga0210397_11589263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300021420\|Ga0210394_10472106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300021475\|Ga0210392_10012186	Not Available	4650	Open in IMG/M
3300021475\|Ga0210392_11324452	Not Available	539	Open in IMG/M
3300021478\|Ga0210402_10447314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1200	Open in IMG/M
3300021478\|Ga0210402_11684896	Not Available	561	Open in IMG/M
3300021560\|Ga0126371_10678557	Not Available	1179	Open in IMG/M
3300021560\|Ga0126371_11494667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Rhodoblastus sphagnicola	804	Open in IMG/M
3300021560\|Ga0126371_13093630	Not Available	563	Open in IMG/M
3300021560\|Ga0126371_13770445	Not Available	511	Open in IMG/M
3300022527\|Ga0242664_1049318	Not Available	765	Open in IMG/M
3300025915\|Ga0207693_11225883	Not Available	565	Open in IMG/M
3300025925\|Ga0207650_11084768	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300025928\|Ga0207700_10025671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4096	Open in IMG/M
3300025930\|Ga0207701_10384981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1210	Open in IMG/M
3300025931\|Ga0207644_11878144	Not Available	501	Open in IMG/M
3300025938\|Ga0207704_11362283	Not Available	607	Open in IMG/M
3300025945\|Ga0207679_12186385	Not Available	502	Open in IMG/M
3300025960\|Ga0207651_10773016	Not Available	850	Open in IMG/M
3300026078\|Ga0207702_11648090	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300027857\|Ga0209166_10384770	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300028790\|Ga0307283_10029046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1220	Open in IMG/M
3300028876\|Ga0307286_10136905	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300031092\|Ga0308204_10053750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300031231\|Ga0170824_127280847	Not Available	816	Open in IMG/M
3300031572\|Ga0318515_10308246	Not Available	849	Open in IMG/M
3300031680\|Ga0318574_10847769	Not Available	535	Open in IMG/M
3300031682\|Ga0318560_10557299	Not Available	621	Open in IMG/M
3300031748\|Ga0318492_10586248	Not Available	594	Open in IMG/M
3300031765\|Ga0318554_10525637	Not Available	669	Open in IMG/M
3300031777\|Ga0318543_10472251	Not Available	562	Open in IMG/M
3300031799\|Ga0318565_10374238	Not Available	691	Open in IMG/M
3300031890\|Ga0306925_10909067	Not Available	905	Open in IMG/M
3300031890\|Ga0306925_10930074	Not Available	892	Open in IMG/M
3300031893\|Ga0318536_10567468	Not Available	569	Open in IMG/M
3300031897\|Ga0318520_10818188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	585	Open in IMG/M
3300031912\|Ga0306921_11462147	Not Available	749	Open in IMG/M
3300031942\|Ga0310916_11517498	Not Available	546	Open in IMG/M
3300031954\|Ga0306926_11280292	Not Available	857	Open in IMG/M
3300031954\|Ga0306926_11579523	Not Available	754	Open in IMG/M
3300031954\|Ga0306926_12315936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	595	Open in IMG/M
3300031981\|Ga0318531_10275685	Not Available	760	Open in IMG/M
3300032008\|Ga0318562_10377849	Not Available	824	Open in IMG/M
3300032008\|Ga0318562_10913785	Not Available	501	Open in IMG/M
3300032009\|Ga0318563_10714180	Not Available	538	Open in IMG/M
3300032044\|Ga0318558_10612399	Not Available	544	Open in IMG/M
3300032261\|Ga0306920_100818320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300032261\|Ga0306920_103918457	Not Available	542	Open in IMG/M
3300034817\|Ga0373948_0149245	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.77%
Host-Associated	Host-Associated	26.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.31%
Plants	Host-Associated → Plants	26.23%
Aquatic	Environmental → Aquatic	2.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.20%
Roots	Host-Associated → Plants → Roots	2.46%
Freshwater	Environmental → Aquatic → Freshwater	1.64%
Sediment	Environmental → Aquatic → Sediment	0.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.28%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.28%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.82%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1014843271	3300004082	Bog Forest Soil	VILGQNPPEIAYWERGEWWLAGDPKPWHPEAVTVVSDRLVFKPRLTPVA*
Ga0066388_1039742662	3300005332	Tropical Forest Soil	AYWERGEWWLAGDAKPWHSEAVTAVSERLVFKPRLAPVA*
Ga0070692_109515161	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VILGQNPPEIAYWERGEWWLAGDAKPWQPDAVTVASERLVFKPRLAPVA*
Ga0070714_1009347332	3300005435	Agricultural Soil	NPPEIAYWERGEWWLAGDAKPWQPEAVTVVSDRLVFRPRLTPVA*
Ga0070714_1021192881	3300005435	Agricultural Soil	VVLGQNPPEVAYSQRGESWLAGDAKPWAGDAVTVVSDRLIYRPPLKPVA*
Ga0070713_1002217344	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EIAYWERGEWWLSGDAKPWQPDAVTVVSDRLVFRPRLAPVA*
Ga0070713_1012189451	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VQTASGACRWLSWVELGQNPPEIAYWERAGDAKPWQPEAVTVVSDRLVFRPRLTPVA*
Ga0070711_1001993871	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQTASGACRWLSWVELGQNPPEIAYWGEGGDAKPWQPEAVTVVSDRLVFRPRLTPVA*
Ga0070711_1017198131	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LGQNPPEIAYWERGEWWLAGEARPWQPAAVNVLGDKLVFRPRLTPVAGRAPWHP*
Ga0068867_1012307902	3300005459	Miscanthus Rhizosphere	GQNPPEIAYWERGEWWLAGDAKPWHPDAVAVISERLVFKPRLAPVA*
Ga0070735_105919071	3300005534	Surface Soil	NPPEVAYWERGEWWLCSNEMPWQPEAVTVVSDRLVFRPRLSPVA*
Ga0070730_102191002	3300005537	Surface Soil	PEIAYWERGEWWLCGESRPWRPDSVTVVSNRLVFRPKPLPVA*
Ga0068855_10009733710	3300005563	Corn Rhizosphere	PEVAYWERGEWWLACDAKPWQPEAVTVVSERLVFKPRLSPVA*
Ga0070664_1005514033	3300005564	Corn Rhizosphere	RGEWWLAGDPNPWQPEAVTVISERLVFTPRLKPVA*
Ga0068856_1003894821	3300005614	Corn Rhizosphere	VILGQNPPEIAYWERGEWWLAGDAKPWQPDAVTVASERLVFKPRL
Ga0070717_111410291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QNPPEIAYWERGEWWLAGEARPWHPEAVTVASDRLVFKPRLKPVAA*
Ga0070717_113107901	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VILGQNPPEIAYRERGERWLAGDARPWKAEAATFASESSGIQT*
Ga0070717_116921923	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ILGQNPPEIAYWERGEWWLAGDAKPWHPEAVTVASDRLVFTPRLKPVA*
Ga0075432_100997442	3300006058	Populus Rhizosphere	VILGQNPPEIAYWERGEWWLAGDAKPWHSEAVTVASDRLV*
Ga0075017_1004134582	3300006059	Watersheds	GFYGVILGQNPPAIAYWERGEWWLAGEARPWQPEAATVASERLVFKPRLAPVV*
Ga0070715_103564402	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PEIAYWERGEWWLAGDAKPWQPEAVVVISDRLVFTPRLRPVT*
Ga0070712_1013284761	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ERGEWWLAGDAKPWQPEAVTVVSDRLVFRPRLTPVA*
Ga0070712_1013691003	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AYWERGEWWLAGDARPWQPDAVIVLGDKLVFRPRLTPVV*
Ga0097621_1003885791	3300006237	Miscanthus Rhizosphere	VIVGQNPPEIAYWERGEWWLAGDAKPWHPEAVTVASDRLVFTPRLKPVA*
Ga0097621_1012355492	3300006237	Miscanthus Rhizosphere	LGQNPPEIAYWERGEWWLANDAKPRQSEAVTVVSDRLVFKPRLSPVA*
Ga0079222_121518272	3300006755	Agricultural Soil	VVLGQNPPEVACWERGEWWLAGDAKPWQAEAVTVVSDRLMYRPPLKPVAYLRSSFV*
Ga0099795_102916742	3300007788	Vadose Zone Soil	VVLGENPPEIAYREHGEWWLAGDARPWQPDAVNVLSDKLVFRPRLTSVAGRDVWPP*
Ga0105245_107537653	3300009098	Miscanthus Rhizosphere	FYWVIVGQNPPEIAYWERGEWWLAGDAKPWHPEAVTVASDRLVFTPRLKPVA*
Ga0105243_125502111	3300009148	Miscanthus Rhizosphere	RGEWWLANDAKPRQSEAVTVVSDRLVFKPRLSPVA*
Ga0111538_127857461	3300009156	Populus Rhizosphere	RGEWWLACDAKPWQPEAGTVVSERWVFKPRLAPVA*
Ga0105242_106498781	3300009176	Miscanthus Rhizosphere	QNPPEIAYWEHGEWWLAGDAKPWQSEAVTVVSERLVFKPRLSPVA*
Ga0105248_118438503	3300009177	Switchgrass Rhizosphere	RLEGFYWVILGQNPPEVAYWERGEWWLAGDAKPWQPEAVTVVSERLV*
Ga0126374_112793661	3300009792	Tropical Forest Soil	WVMLGKNPPEIAYWERGEWWLAGDPKAWQPDAVSVVSDRLVFKPRLSRVA*
Ga0126373_107387771	3300010048	Tropical Forest Soil	WERGEWWLAGDPKPWHSDAVTVVSERLVFEPRLTPVA*
Ga0126373_128102502	3300010048	Tropical Forest Soil	GPDPPEIAYWERGEWWLAGNATPWQPVVVTVVSDRLVFKPRLAPVA*
Ga0127503_108321462	3300010154	Soil	VILGQNPPEIAYWERGEWWLCGEGRPWHPEAVSVASDRLVFKPKLVPVA*
Ga0126378_107364891	3300010361	Tropical Forest Soil	YWERGEWWLAGDPRPWHPEAVTVVSGRLMFKPKLVPVA*
Ga0126378_109652571	3300010361	Tropical Forest Soil	PEIAYWERGEWWLAGDPKPWQPEAVTVVSDRLVFKPKLVPVA*
Ga0126378_121105541	3300010361	Tropical Forest Soil	SPSRDAWWLAGDARPWQPGAVTVLSERLVFRPRLVPVA*
Ga0126378_130436981	3300010361	Tropical Forest Soil	ERGEWWLAGDPKPWQPDAVTVLSDRLVFRPRLAPVA*
Ga0126379_123417162	3300010366	Tropical Forest Soil	MGRNPPEIAYWERGEWWLAGDSKPWQPEAVTVASERLVFKPRLVPVA*
Ga0105239_104113534	3300010375	Corn Rhizosphere	EIAYWERAEWWLAGDAKPWHPDAVAVISERLVFKPRLAPVA*
Ga0126381_1015489212	3300010376	Tropical Forest Soil	VSLGQNPPEIAYWERGEWWLAGDPKPWQPEAVTVLSNRLVFRPRVAPVAA*
Ga0126381_1022438141	3300010376	Tropical Forest Soil	VTAGAGPDPPEIAYWERGEWWLAGDPNPWQTEAVTVVSDRLVFRPRLTPVA*
Ga0126381_1046955251	3300010376	Tropical Forest Soil	PKIADWERGEWWLAGDAKPWHADAVTVASDRLIFRPRLTPVA*
Ga0134126_109571731	3300010396	Terrestrial Soil	VQTASGACRWLSWVELGQNPPEIAYWERGEWWLAGDAKPWQPEAVNVVSDRLVFRPRLTPVA*
Ga0134124_122652991	3300010397	Terrestrial Soil	VILGQNPPEIAYWERGEWWLSGDAKPWQPDAVTVVSDRLVFRPRLAPVA*
Ga0150985_1168411013	3300012212	Avena Fatua Rhizosphere	PEIAYWERGEWWLAGDPKPWQPEAVTVASERLVFTPRLTPVA*
Ga0164305_106617952	3300012989	Soil	VLGPNPLEIAYWERSEWWLRGEDSPWKPEAVRIASDRLVFRPRLSPVAYNVG
Ga0163162_110529442	3300013306	Switchgrass Rhizosphere	VLGQNPPEIAYWERGEWWLTGDGKPWQPDAVNVLSDRLMFRPRLMPVA*
Ga0157372_121352763	3300013307	Corn Rhizosphere	GEWWLAGDAKPWQLEAVTVVSERLVFKPRLSPVA*
Ga0163163_118360692	3300014325	Switchgrass Rhizosphere	VVLGQNPPEIAYWERGEWWLANDAKPRQSEAVTVVSDRLVFKPRLSPVA*
Ga0157379_126257781	3300014968	Switchgrass Rhizosphere	YWVPEIAYWERGERWLAGDARPWQPDGVTVLGDRLVFRPRLMPVS*
Ga0157376_110051963	3300014969	Miscanthus Rhizosphere	QNPPEIAYRERGEWWLAGDAKPWQPDAVTVARDRLLFTPRLKPAA*
Ga0157376_120193522	3300014969	Miscanthus Rhizosphere	EGSYWVVLGQNPREIAYREQGEWWLAGDAEPWQPDAVTVLGDKLVVRPRGCR*
Ga0173480_102343032	3300015200	Soil	LGQNPPEIAYWERGEWWLAGDAKPWHPDAVAVVSERLVFAPRLKPVA*
Ga0132258_122499551	3300015371	Arabidopsis Rhizosphere	NPPEIAYWERGEWWLAGDPKPWHPEAVTVASDRLVFKPRLAPVA*
Ga0132258_134798652	3300015371	Arabidopsis Rhizosphere	MREGFYWVILGQNPPEIAYWERGEWWLAGDPKPWLPDAVIAVSERLVPVA*
Ga0132256_1020100522	3300015372	Arabidopsis Rhizosphere	VILGQNPPEIAYWERNEWWLAGDARPWRPDAVSVVSDRLVFRPQLMPVA*
Ga0132256_1030428362	3300015372	Arabidopsis Rhizosphere	LGQNPPEIAYWVSGEWWLAGEAKPWHPKAVTVVSDPLVFKPRLAPVA*
Ga0132255_1029601874	3300015374	Arabidopsis Rhizosphere	RGEWWLAGDPKPWRPEAVTVVSDQLVLKPRLVPVA*
Ga0182033_110715162	3300016319	Soil	YWERGEWWLCGEDRPWQPEAVNVVSNRLVFRPRLFPVA
Ga0182032_118122551	3300016357	Soil	GTAGGLLLGGLGQNPPEIAYLERGEWWLAGDPTPWPPEAVTVVSDRLVFKPRLVPAA
Ga0182034_116792662	3300016371	Soil	WERGEWWLCGESRPWHPDAVTVASDRLVFKPRLAPVA
Ga0182037_116267231	3300016404	Soil	WVVLGQNPPEIAYWERGEWWLAGDARPWQPEAVTVLSDRLVFRPRLVPIA
Ga0182039_106524993	3300016422	Soil	VLGQNPPEIAYWERGEWWLAGDPRPWQPDAVTAVSGRLVFRPRLVAVA
Ga0182039_112441901	3300016422	Soil	VLGQNPPEIAYWERGEWWLAGDARPWQPEAVTVLSDRLMFRPRLVPVA
Ga0182038_117317311	3300016445	Soil	NPPEIAYRERGEWWLCGEDRPWQPEAVTVASDRLVFKPRLSPVA
Ga0190274_118710361	3300018476	Soil	RNPPEIAYWERGEWWLAGDAKPWHPDAVAVVSERLVFTPRLKPVA
Ga0210395_101056806	3300020582	Soil	VILGQNPPEIAYWERGEWWLAGEAKPWHPEAVTVVSDRL
Ga0210401_104095171	3300020583	Soil	PPEIAYWERGEWWLAGDPKPWHPEAVTVVSDRLVFKPKLVPVA
Ga0210401_112068661	3300020583	Soil	EIAYWERGEWWLAGEPRPWQPEAVTVASDRLVFKPRLALVA
Ga0213881_105335752	3300021374	Exposed Rock	MPAGRRPWERGEWWLAGDARPWHDDAVTIASDRLVFRPALLPAA
Ga0210397_115892631	3300021403	Soil	GFYWVTLGQNPPEIAYWERGEWWLAGDPRPWQPDAVEVLSDTLVYRPRPRLVPAA
Ga0210394_104721063	3300021420	Soil	VAYWERGEWWLCANEKPWHPDAVTVVSDRLVYRPRLTPVA
Ga0210392_100121865	3300021475	Soil	VILGQHPPEIAYGERGEWWLAGEAKPWHPEAVTVVSDRLVFKP
Ga0210392_113244521	3300021475	Soil	SQNPPEIAYWERREWWLAGDAKSWQPEAVTVVSDRLIFRPRTALW
Ga0210402_104473142	3300021478	Soil	VVLGQNPPEIAYWERGERWLAGDARPWQPDAVNVLSDKLVFGRLTPVA
Ga0210402_116848963	3300021478	Soil	NPPEIACWESGEWWLAGEARPWHPKAVTVASDRLVFTPQLKPVA
Ga0126371_106785571	3300021560	Tropical Forest Soil	VVLGQNPPEIAYWERGEWWLAGDPKPWHQEAVTVVSDRLVFKPRL
Ga0126371_114946671	3300021560	Tropical Forest Soil	IAYWERGEWWLAGDPRPWRSDAVIVASEQLVFKPRLAPVA
Ga0126371_130936302	3300021560	Tropical Forest Soil	FYWVALGQNPPEIAYWERGEWWLAGDARPWQADAVTVLSDRLVFRPRLAPVA
Ga0126371_137704452	3300021560	Tropical Forest Soil	NPPEIAYWERGEWWLAGSATPWQPDAVTVISERLVFKPRLTPVA
Ga0242664_10493182	3300022527	Soil	VILGQNPPEIAYWERGEWWLAGEAKPRHPEALTVVSDRLVFKP
Ga0207693_112258832	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ERGEWWLAGDAKPWQPEAVTVVSDRLVFRPRLTPVA
Ga0207650_110847682	3300025925	Switchgrass Rhizosphere	EIAYWERGEWWLAGDAKPWLPEAATVVSERLVFTPRLKPVA
Ga0207700_100256716	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EIAYWERGEWWLSGDAKPWQPDAVTVVSDRLVFRPRLAPVA
Ga0207701_103849811	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ILGRNPPEVAYWERGEWWLACDAKPWQPEAVTVVSERWVFKPRLAPVA
Ga0207644_118781441	3300025931	Switchgrass Rhizosphere	PEVAYCERGEWWLAGDSKPWQPEAVTVIIERLVFTPRLKPVA
Ga0207704_113622833	3300025938	Miscanthus Rhizosphere	WERGEWWLAGDAKPWQPDAVTVASHRLLFKPRLTPVA
Ga0207679_121863851	3300025945	Corn Rhizosphere	EPTRDAYWERGEWWLTGDPKPWQPEAVTVASDRLVFRPQLTPVA
Ga0207651_107730161	3300025960	Switchgrass Rhizosphere	TGSAASGWLAGDAKPRQPEAVTVVSERLVFKPRLSSVA
Ga0207702_116480902	3300026078	Corn Rhizosphere	GRFYWVVLGQNPPEVAYWERGEWWLAGDAKPWHAEAVTVVSDRLICRPPLKPVA
Ga0209166_103847702	3300027857	Surface Soil	GQNPPEIAYWERGEWWLCGESRPWRPDSVTVVSNRLVFRPKPLPVA
Ga0307283_100290461	3300028790	Soil	GQNPPEIAYWERGEWWLAGDARPWQPDAVNVLSDKLVFTPRPTPVAGRDPWRP
Ga0307286_101369051	3300028876	Soil	WVILGQNPPEIAYWERGEWWLTGDPKPWHPEAVTVVSERLVFKPRLAAVV
Ga0308204_100537503	3300031092	Soil	LGQNPPEIAYWERGEWWLAGDARPWQPAAVNVLSDKLVFRPRLAPVAGRDLWHP
Ga0170824_1272808474	3300031231	Forest Soil	ACWERGEWWLAGDAKPWQPEAVTVVSDRLVFKPRLAPVP
Ga0318515_103082464	3300031572	Soil	VVLGRNPPEIAYWERGEWWLAGDPKPWHPEAVTVVSDRLVFKPRLVPVA
Ga0318574_108477691	3300031680	Soil	WERGEWWLAGDPKPWHPEAVTVVSDRLVFKPRLMPVA
Ga0318560_105572991	3300031682	Soil	NCLLEAGEWWLAGDARPWRPEAVTVLSDRLVFRPRLVPIA
Ga0318492_105862483	3300031748	Soil	WERAVWWLAGDPKPWHPDAVTVVSDRLVFKPRLMPVA
Ga0318554_105256373	3300031765	Soil	VVLGQNPPEIAYWERGEWWLAGDARPWQPEAVTVLSDRLVFRPRLVPIA
Ga0318543_104722511	3300031777	Soil	VVLGRNPPEIAYRERGEWRLAGDPKPWHSEAVTVVSDRAVFK
Ga0318565_103742382	3300031799	Soil	WVVLGQNPPEIAYWERGEWWLAGDPKPWQPEAVTVASDRLVFKPRLAPVA
Ga0306925_109090672	3300031890	Soil	VVLGQNPPEIAYWERGEWWLAGDARPWQPEAVTVLSDRLVFRPRLVPVA
Ga0306925_109300742	3300031890	Soil	GQNPPEIAYWERGEWWLAGDPKPWQPEAVTVVSDRLAFKPRLAPVA
Ga0318536_105674681	3300031893	Soil	GRNPPEIAYWERGEWWLAGDPKPWHPEAVTVVSDRLVFKPRLVPVA
Ga0318520_108181882	3300031897	Soil	VLGQNPPEVAYWERGEWWLCGEDRPWQPEAVNVVSNRLVFRPRLFPVA
Ga0306921_114621472	3300031912	Soil	AYWTRGEWWLVGDTQPYQPEACSVVSDRLVFKPRLAPVA
Ga0310916_115174981	3300031942	Soil	VILGQNPPEIAYWERGEWWLAGDPKPWQPEAVTVVSDRLAFKPRLAPVA
Ga0306926_112802921	3300031954	Soil	YWERGEWWLAGDPKPWQPEAATAISDRLVFKPRLVPVA
Ga0306926_115795231	3300031954	Soil	GFYWVILGQNPPEIAHRERGEWWLAGDAKPWHADAVTVASDRLIFRPRLTPVA
Ga0306926_123159361	3300031954	Soil	EIAYWERGEWWLAGDAKPWQAEAVTVVSDRLVFKPRLAPVA
Ga0318531_102756852	3300031981	Soil	VVLDKNPPEIAYWERGEWWLAGDPKPWQPEAVTVVSERLVFKPRLVPVA
Ga0318562_103778494	3300032008	Soil	YWERGEWWLAGDPKPWQPEAVTVVSDRLVFKPRLVPVA
Ga0318562_109137851	3300032008	Soil	YWERGEWWLAGDPKPWQPEAVTVVSDRLVFEPRLAPVV
Ga0318563_107141801	3300032009	Soil	YWVVLGQNPPEIAYWERGEWWLAGDARPWQPEAVTVLSDRLVFRPRLVPVA
Ga0318558_106123991	3300032044	Soil	GQNPPEIAYWERGEWWLAGDPKPWRQEAVAVASERLVFKPRLAPVA
Ga0306920_1008183201	3300032261	Soil	LGQKPEIAYWERGEWGLAGDPKPWNPEAVTVVSDRLVFKPRLAPVA
Ga0306920_1039184572	3300032261	Soil	VLGQNPPEIAYWERSEWWLAGDARPWQPEAVTVLGDRLVFQPRLAPAA
Ga0373948_0149245_1_108	3300034817	Rhizosphere Soil	RGEWWLAGDAKPWQSEAVTVVSERLVFKPRLSPVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071697

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences